RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPSB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000175093

Ensembl transcript IDs: ENST00000310546.3, ENST00000507895.1, ENST00000508126.1, ENST00000508828.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTTGGTGGCAGGATTTCCAGGAGGTGCAGACTCCAGGCTCTCTGTaGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGCCTCGAGGGC +
Preference number: 1 (lower is better)
Translates to: GWWQDFQEVQTPGSL*LRRRCLTWEGCLEG
Trigger: GCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCACCTCCTGGAAATCCTGCCACCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 90 bp AGGAGGTGCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTaGCTTGGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAG +
Preference number: 1 (lower is better)
Translates to: RRCRLQALCGSEGGV*LGRAASRAVDTVGK
Trigger: CTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCACCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 90 bp GTGCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTaGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACC +
Preference number: 1 (lower is better)
Translates to: VQTPGSLWLRRRCLT*EGCLEGSRYCWQET
Trigger: GGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 90 bp TCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGTGTaGCAATCCTGCCGCCCTGGCAAGGCGTATGGGCCAGGAGGGGCA +
Preference number: 1 (lower is better)
Translates to: SWEQSLKVAQSPKTV*QSCRPGKAYGPGGA
Trigger: TGCCCCTCCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGTCACACCGTTTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 90 bp AGGAGAAGGGTAGATCCTTTCCCCTATGTGCCATGGGACTGTGAATaGCAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGTGCTG +
Preference number: 1 (lower is better)
Translates to: RRRVDPFPYVPWDCE*QEGRALRCVSVSVL
Trigger: CAGCACAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATGGCACATAGGGGAAAGGATCTACCCTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 90 bp AGCCAGGAGAAGGGTAGATCCTTTCCCCTATGTGCCATGGGACTGTaGATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGT +
Preference number: 1 (lower is better)
Translates to: SQEKGRSFPLCAMGL*MTGGSGPAVCVCVC
Trigger: ACAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATGGCACATAGGGGAAAGGATCTACCCTTCTCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR GCA 90 bp CCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTaGCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTC +
Preference number: 1 (lower is better)
Translates to: PGSLWLRRRCLTWEG*LEGSRYCWQETFRF
Trigger: GAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 90 bp GGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTCTGCGGTTaGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAA +
Preference number: 1 (lower is better)
Translates to: GRCLHTALSTCQVCG*ASWEQSLKVAQSPK
Trigger: TTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 90 bp AGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTaGAGAGAGGTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCT +
Preference number: 1 (lower is better)
Translates to: RICSSLGQTSQTHLP*REVSGHPENCESVA
Trigger: AGCCACTGACTCACAGTTCTCTGGATGCCCAGACACCTCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 90 bp AGGTGTCTGACTTGGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTaGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTC +
Preference number: 1 (lower is better)
Translates to: RCLTWEGCLEGSRYC*QETFRFQSWYHILV
Trigger: GACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 90 bp AATAAGGAAACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTaGTTGGTGGCAGGATTTCCAGGAGGTGCAGACTCCAGGCTCTCT +
Preference number: 1 (lower is better)
Translates to: NKETGSLINTVAAVS*LVAGFPGGADSRLS
Trigger: AGAGAGCCTGGAGTCTGCACCTCCTGGAAATCCTGCCACCAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 90 bp ACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTaGTCTTTGAAAGAACTGAGTGTCCTGGGGAGCCAGGAGAAGGGT +
Preference number: 1 (lower is better)
Translates to: TVGKRPFVSKVGTTS*SLKELSVLGSQEKG
Trigger: ACCCTTCTCCTGGCTCCCCAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 90 bp GAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTaGTACCACATCCTGGTCTTTGAAAGAACTGAGTGTCCTGGGGAG +
Preference number: 1 (lower is better)
Translates to: EGSRYCWQETFRFQS*YHILVFERTECPGE
Trigger: CTCCCCAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGATGTCCTGCAGGCGCTaGCGGCCCAGGGCCGAGCGG +
Preference number: 2 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGMSCRR*RPRAER
Trigger: CCGCTCGGCCCTGGGCCGCCAGCGCCTGCAGGACAT...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR-3UTR CCA 90 bp CGGTGTGACAATCCTGCCGCCCTGGCAAGGCGTATGGGCCAGGAGGGGCACGGCCTGTGTCCTGGTTGGTaGCAGGATTTCCAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: RCDNPAALARRMGQEGHGLCPGW*QDFQEV
Trigger: CACCTCCTGGAAATCCTGCCACCAACCAGGACACAG...GCCGTGCCCCTCCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGTCACACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp GTGCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTCCGAAGGAGGTGTCTaGCTTGGGAGGGCTGCCTCG +
Preference number: 2 (lower is better)
Translates to: VQTPGSLWLRRRCLTWEGSEGGV*LGRAAS
Trigger: CGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGA...GCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp GGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTCTGCGGTTGGGCCTCCACAATCCTGCCGCCCTaGCAAGGCGTATGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GRCLHTALSTCQVCGWASTILPP*QGVWAR
Trigger: CCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGT...GGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp CACTTGCCAGGTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACACCAGGGCCGAGCGGATaGATCTCCGGCACAGGTCCA +
Preference number: 2 (lower is better)
Translates to: HLPGLRLGLLGTVSQSGTPGPSG*ISGTGP
Trigger: TGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGG...TGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR-3UTR TCA 90 bp GGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGTGTGCCATGGGACTGTaGATGACAGGAGGGTCGGGC +
Preference number: 2 (lower is better)
Translates to: GSSSIPARGPGSEQVENVCAMGL*MTGGSG
Trigger: GCCCGACCCTCCTGTCATTCACAGTCCCATGGCACA...CACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp CGGAGGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAAAGTCCTAAAACGGTGTaGCAATCCTGCCGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: RRQQQHSCERTRLGAGRESPKTV*QSCRPG
Trigger: GCCAGGGCGGCAGGATTGTCACACCGTTTTAGGACT...TTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp TTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTGCAGGGGCAGGGAGCTaGTGTCCTGCAGGCGCTGGC +
Preference number: 2 (lower is better)
Translates to: FKEVSRKVSPHCTVHLPGAGAGS*CPAGAG
Trigger: GCCAGCGCCTGCAGGACATCAGCTCCCTGCCCCTGC...ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR-3UTR GCA 90 bp GGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGACTGCACTGTCCACTTaGCAGGTCTGCGGTTGGGCC +
Preference number: 2 (lower is better)
Translates to: GSSSIPARGPGSEQVENVTALST*QVCGWA
Trigger: GGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGT...CACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAACTGACTTGGGAGGGCTaGCTCGAGGGCAGTAGATAC +
Preference number: 2 (lower is better)
Translates to: QPCRTLNGRCPETLTLQELTWEG*LEGSRY
Trigger: GTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAG...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp CCCAACCCAGGACACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTGCATCCAGAGAACTGTaGGTCAGTGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PNPGHIRLGCHNAPSSPVASREL*VSGWEG
Trigger: CCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGC...AACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTGGGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp CCCAACCCAGGACACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTCTGACTTGGGAGGGCTaGCTCGAGGGCAGTAGATAC +
Preference number: 2 (lower is better)
Translates to: PNPGHIRLGCHNAPSSPVLTWEG*LEGSRY
Trigger: GTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAG...AACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTGGGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGGATCAATACGGTGGCTaGTGTGTCCTGGTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGDQYGG*CVLVGG
Trigger: GCCACCAACCAGGACACAGCAGCCACCGTATTGATC...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp GCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGTCCACTTGCCAGGTCTaGGGTTGGGCCTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: AVGPPGNSLSKWHRVLKRSTCQV*GWASWE
Trigger: TTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGA...CCGTTTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp GTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAAGGAGGTGTCTGACTTaGGAGGGCTGCCTCGAGGGC +
Preference number: 2 (lower is better)
Translates to: VCGWASWEQSLKVAQSPKRRCLT*EGCLEG
Trigger: GCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCT...TTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAACTGTGTCCTGGTTGGTaGCAGGATTTCCAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QPCRTLNGRCPETLTLQELCPGW*QDFQEV
Trigger: CACCTCCTGGAAATCCTGCCACCAACCAGGACACAG...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp GCAGGTAGAGAATGTGTCTCCCATATCCACCCTTCCAGTCACAAGGCTGCCCCCTGCCAGGTCTGCGGTTaGGCCTCCTGGGAACAGTCT +
Preference number: 2 (lower is better)
Translates to: AGRECVSHIHPSSHKAAPCQVCG*ASWEQS
Trigger: AGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCA...GGGGGCAGCCTTGTGACTGGAAGGGTGGATATGGGAGACACATTCTCTACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp CACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTAGCACCTTTGGAACTGCACTGTCCACTTaGCAGGTCTGCGGTTGGGCC +
Preference number: 2 (lower is better)
Translates to: HIRLGCHNAPSSPVSTFGTALST*QVCGWA
Trigger: GGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGT...TCCAAAGGTGCTAACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp CCCAACCCAGGACACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTACCCTGAATGGACGTTaGCCAGAGACCCTGACACTC +
Preference number: 2 (lower is better)
Translates to: PNPGHIRLGCHNAPSSPVTLNGR*PETLTL
Trigger: GAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGT...AACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTGGGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp TGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAGGAAACAGGCTCTCTaGTCAATACGGTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: CLGIQRTVSQWLGRGARGRKQAL*SIRWLL
Trigger: CAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCT...TCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp CCCAACCCAGGACACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTAAGGTGTCTCCACACTaGACTGTCCACTTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: PNPGHIRLGCHNAPSSPVKVSPH*TVHLPG
Trigger: ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTT...AACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTGGGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp AGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGTCTCCCGGATATGCTCTTCCCTaGGGCAAACCAGTCAGACTC +
Preference number: 2 (lower is better)
Translates to: SSIPARGPGSEQVENVSPGYALP*GKPVRL
Trigger: GAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCC...GGGAGACACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp AGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGTCTCCCAGGACACATCAGACTTaGGTGTCACAATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: SSIPARGPGSEQVENVSPRTHQT*VSQCPQ
Trigger: CTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCT...GGGAGACACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CAA 90 bp TTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTaGCCAGGTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGT +
Preference number: 2 (lower is better)
Translates to: FKEVSRKVSPHCTVH*PGLRLGLLGTVSQS
Trigger: ACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp GTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAGCTGCCCATCAGGCTTaGCTCACTGGTACTGCAGAT +
Preference number: 2 (lower is better)
Translates to: VCGWASWEQSLKVAQSPKAAHQA*LTGTAD
Trigger: ATCTGCAGTACCAGTGAGCCAAGCCTGATGGGCAGC...TTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR-3UTR TCA 90 bp AGTTCCCCCGTTAGCACCTTTGGACTAAGTACTGTCCTCTCCGCATTCCTCTTTTGTGCCATGGGACTGTaGATGACAGGAGGGTCGGGC +
Preference number: 2 (lower is better)
Translates to: SSPVSTFGLSTVLSAFLFCAMGL*MTGGSG
Trigger: GCCCGACCCTCCTGTCATTCACAGTCCCATGGCACA...AAAGAGGAATGCGGAGAGGACAGTACTTAGTCCAAAGGTGCTAACGGGGGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp GTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAAGGAAACAGGCTCTCTaGTCAATACGGTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: VCGWASWEQSLKVAQSPKRKQAL*SIRWLL
Trigger: CAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCT...TTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAAGGCAGTAGATACTGTTaGCAAGAGACCTTTCGTTTC +
Preference number: 2 (lower is better)
Translates to: QPCRTLNGRCPETLTLQEGSRYC*QETFRF
Trigger: GAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCC...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp AAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGAGCATCCAGAGAACTGTaGGTCAGTGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: KDMLFPGANQSDSSSLKRASREL*VSGWEG
Trigger: CCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGC...TCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp ATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTCCACTTGCCAGGTCTaGGGTTGGGCCTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: IMVRICSSLGQTSQTHLPSTCQV*GWASWE
Trigger: TTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGA...GGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp AAAATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTAGGGAGCTGATGTCCTaGAGGCGCTGGCGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KIMVRICSSLGQTSQTHLRELMS*RRWRPR
Trigger: CCTGGGCCGCCAGCGCCTGCAGGACATCAGCTCCCT...AAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR-3UTR CCA 90 bp TATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGAGGTGTCTGCTGTGTCCTGGTTaGTGGCAGGATTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: YALPWGKPVRLIFPEERCLLCPG*WQDFQE
Trigger: CTCCTGGAAATCCTGCCACCAACCAGGACACAGCAG...ACACCTCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp TATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGAGGTGTGTGGCTGCTGTGTCCTaGTTGGTGGCAGGATTTCCA +
Preference number: 2 (lower is better)
Translates to: YALPWGKPVRLIFPEERCVAAVS*LVAGFP
Trigger: TGGAAATCCTGCCACCAACCAGGACACAGCAGCCAC...ACACCTCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp GTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAATCCTTTCCCCTATGTaGCATGGGACTGTGAATGAC +
Preference number: 2 (lower is better)
Translates to: VCGWASWEQSLKVAQSPKILSPM*HGTVND
Trigger: GTCATTCACAGTCCCATGGCACATAGGGGAAAGGAT...TTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp CACTTGCCAGGTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGTTGGTACCACATCCTaGTCTTTGAAAGAACTGAGT +
Preference number: 2 (lower is better)
Translates to: HLPGLRLGLLGTVSQSGTVGTTS*SLKELS
Trigger: ACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAAC...TGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp ATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCACTCCAGGCTCTCTGTaGCTCCGAAGGAGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: IMVRICSSLGQTSQTHLPTPGSL*LRRRCL
Trigger: CAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGT...GGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp AGTTCCCCCGTTAGCACCTTTGGACTAAGTACTGTCCTCTCCGCATTCCTCTTTGTGGCTGCTGTGTCCTaGTTGGTGGCAGGATTTCCA +
Preference number: 2 (lower is better)
Translates to: SSPVSTFGLSTVLSAFLFVAAVS*LVAGFP
Trigger: TGGAAATCCTGCCACCAACCAGGACACAGCAGCCAC...AAAGAGGAATGCGGAGAGGACAGTACTTAGTCCAAAGGTGCTAACGGGGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR GCA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAATCCTTTCCCCTATGTaGCATGGGACTGTGAATGAC +
Preference number: 2 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQILSPM*HGTVND
Trigger: GTCATTCACAGTCCCATGGCACATAGGGGAAAGGAT...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp TTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAAAGAACTGAGTGTCCTGGCACAGGTCCATCAGTaGCAGGGGCTCGGCTGTAGT +
Preference number: 2 (lower is better)
Translates to: FVSKVGTTSWSLKELSVLAQVHQ*QGLGCS
Trigger: ACTACAGCCGAGCCCCTGCCACTGATGGACCTGTGC...CAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR-3UTR CCA 90 bp AATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGCTGTGTCCTGGTTaGTGGCAGGATTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: NNGKDMLFPGANQSDSSSLLCPG*WQDFQE
Trigger: CTCCTGGAAATCCTGCCACCAACCAGGACACAGCAG...GGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR TCA 90 bp CCAGTTAAAAATGAGTCTGGGCAGAGAGTGTCTGAAACATATAAGAGGTGGCAGCAGACTCATCTTCCCTaGAGAGAGGTGTCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: PVKNESGQRVSETYKRWQQTHLP*REVSGH
Trigger: ATGCCCAGACACCTCTCTTCAGGGAAGATGAGTCTG...CTGCCACCTCTTATATGTTTCAGACACTCTCTGCCCAGACTCATTTTTAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp AGTTGGTACCACATCCTGGTCTTTGAAAGAACTGAGTGTCCTGGGGAGCCAGGAGTTGGTACCACATCCTaGTCTTTGAAAGAACTGAGT +
Preference number: 2 (lower is better)
Translates to: SWYHILVFERTECPGEPGVGTTS*SLKELS
Trigger: ACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAAC...TCCTGGCTCCCCAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CCA 90 bp TTGAATAAGGAAACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGGGCAGTAGATACTGTTaGCAAGAGACCTTTCGTTTC +
Preference number: 2 (lower is better)
Translates to: LNKETGSLINTVAAVSWLGSRYC*QETFRF
Trigger: GAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCC...CAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCTTATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp TGTCCTGCAGGCGCTGGCGGCCCAGGGCCGAGCGGATaGATCTCCGGCACAGGTCCATCAGTGGCAGGGGCT +
Preference number: 3 (lower is better)
Translates to: CPAGAGGPGPSG*ISGTGPSVAGA
Trigger: AGCCCCTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGGGCCGCCAGCGCCTGCAGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR GCA 72 bp AGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGTaGTGCCCATCAGGCTTGGCTCACTGGTACTGCAGA +
Preference number: 3 (lower is better)
Translates to: RRVGPCGVCLCL*CPSGLAHWYCR
Trigger: TCTGCAGTACCAGTGAGCCAAGCCTGATGGGCAGCACAGACACAGACACACACCGCAGGGCCCGACCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
3UTR CCA 72 bp AACGGTGTGACAATCCTGCCGCCCTGGCAAGGCGTATaGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCAT +
Preference number: 3 (lower is better)
Translates to: NGVTILPPWQGV*ARRGTASGFHH
Trigger: ATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGTCACACCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp CCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTaGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTGG +
Preference number: 3 (lower is better)
Translates to: PGSLWLRRRCLT*EGCLEGSRYCW
Trigger: CCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp CAGGATTTCCAGGAGGTGCAGACTCCAGGCTCTCTGTaGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: QDFQEVQTPGSL*LRRRCLTWEGC
Trigger: GCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCACCTCCTGGAAATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 72 bp AGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTaGCTTGGGAGGGCTGCCTCGAGGGCAGTAGATACT +
Preference number: 3 (lower is better)
Translates to: RLQALCGSEGGV*LGRAASRAVDT
Trigger: AGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR GCA 72 bp CTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTaGCTCGAGGGCAGTAGATACTGTTGGCAAGAGACC +
Preference number: 3 (lower is better)
Translates to: LWLRRRCLTWEG*LEGSRYCWQET
Trigger: GGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR GCA 72 bp TGCTGTGTCCTGGTTGGTGGCAGGATTTCCAGGAGGTaGAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGT +
Preference number: 3 (lower is better)
Translates to: CCVLVGGRISRR*RLQALCGSEGG
Trigger: ACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCACCTCCTGGAAATCCTGCCACCAACCAGGACACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp CTCCACACTGCACTGTCCACTTGCCAGGTCTGCGGTTaGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAG +
Preference number: 3 (lower is better)
Translates to: LHTALSTCQVCG*ASWEQSLKVAQ
Trigger: CTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 72 bp GTAGATCCTTTCCCCTATGTGCCATGGGACTGTGAATaGCAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: VDPFPYVPWDCE*QEGRALRCVSV
Trigger: CACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATGGCACATAGGGGAAAGGATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 72 bp AAGGGTAGATCCTTTCCCCTATGTGCCATGGGACTGTaGATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: KGRSFPLCAMGL*MTGGSGPAVCV
Trigger: GACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATGGCACATAGGGGAAAGGATCTACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR GCA 72 bp ACGTTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTaGACTGTCCACTTGCCAGGTCTGCGGTTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: TFKEVSRKVSPH*TVHLPGLRLGL
Trigger: GAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR TCA 72 bp CAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGTGTaGCAATCCTGCCGCCCTGGCAAGGCGTATGGGCCA +
Preference number: 3 (lower is better)
Translates to: QSLKVAQSPKTV*QSCRPGKAYGP
Trigger: TGGCCCATACGCCTTGCCAGGGCGGCAGGATTGTCACACCGTTTTAGGACTCTGTGCCACTTTGAGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp ACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTaGTTGGTGGCAGGATTTCCAGGAGGTGCAGACTCC +
Preference number: 3 (lower is better)
Translates to: TGSLINTVAAVS*LVAGFPGGADS
Trigger: GGAGTCTGCACCTCCTGGAAATCCTGCCACCAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp GCACTGTCCACTTGCCAGGTCTGCGGTTGGGCCTCCTaGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAA +
Preference number: 3 (lower is better)
Translates to: ALSTCQVCGWAS*EQSLKVAQSPK
Trigger: TTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CAA 90 bp AAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGATTGCCAGGTCTGCGGTaGGGCCTCCTGGGAACAGTC +
Preference number: 3 (lower is better)
Translates to: KDMLFPGANQSDSSSLKRLPGLR*GLLGTV
Trigger: GACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAA...TCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp ACTTGGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTaGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCAC +
Preference number: 3 (lower is better)
Translates to: TWEGCLEGSRYC*QETFRFQSWYH
Trigger: GTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CAA 90 bp GGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGGTGGCAGGATTTCCAACCACATCCTGGTCTTaGAAAGAACTGAGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: GSLINTVAAVSWLVAGFPTTSWS*KELSVL
Trigger: CAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGT...TGGAAATCCTGCCACCAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CAA 90 bp GGGGCTCTGATATCCCACTGCTGTGATGATTTCCAGTTAAAAATGAGTCTGGGCCACCCTGAATGGACGTaGCCCAGAGACCCTGACACT +
Preference number: 3 (lower is better)
Translates to: GALISHCCDDFQLKMSLGHPEWT*PRDPDT
Trigger: AGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTG...GCCCAGACTCATTTTTAACTGGAAATCATCACAGCAGTGGGATATCAGAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CAA 90 bp ATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCAAACCACATCCTGGTCTTaGAAAGAACTGAGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: MGQEGHGVRLSSFIIQRQTTSWS*KELSVL
Trigger: CAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGT...TTGCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CAA 90 bp TCCCTGGCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTCTTTCGTTTCCAAAGTaGGTACCACATCCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: SLALSATGHTIESLLPKCLSFPK*VPHPGL
Trigger: AAGACCAGGATGTGGTACCAACTTTGGAAACGAAAG...ACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR GCA 72 bp GAAGAGGCAGTGCTGTCTGGGGCTCTGATATCCCACTaGTGTGATGATTTCCAGTTAAAAATGAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: EEAVLSGALISH*CDDFQLKMSLG
Trigger: GCCCAGACTCATTTTTAACTGGAAATCATCACAGCAGTGGGATATCAGAGCCCCAGACAGCACTGCCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp AAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTaGTCTTTGAAAGAACTGAGTGTCCTGGGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: KRPFVSKVGTTS*SLKELSVLGSQ
Trigger: CTGGCTCCCCAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR-3UTR CAA 90 bp GGGGCTCTGATATCCCACTGCTGTGATGATTTCCAGTTAAAAATGAGTCTGGGCCTTTCGTTTCCAAAGTaGGTACCACATCCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: GALISHCCDDFQLKMSLGLSFPK*VPHPGL
Trigger: AAGACCAGGATGTGGTACCAACTTTGGAAACGAAAG...GCCCAGACTCATTTTTAACTGGAAATCATCACAGCAGTGGGATATCAGAGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CCA 72 bp AGATACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTaGTACCACATCCTGGTCTTTGAAAGAACTGAGTGT +
Preference number: 3 (lower is better)
Translates to: RYCWQETFRFQS*YHILVFERTEC
Trigger: ACACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGTATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp GGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGGCGCGTCCTCACGGCTaGTGCCCGGCAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GSSSIPARGPGSEQVENVARPHG*CPAAAP
Trigger: GGGCGCTGCTGCCGGGCATCAGCCGTGAGGACGCGC...CACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp CTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGCCTCGAGGGCAGACGGCCAGCTCTGGATaGTGCAGCCGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LSVAPKEVSDLGGLPRGQTASSG*CSRRRL
Trigger: GAGGCGGCGGCGGCTGCAGCATCCAGAGCTGGCCGT...CTGCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp CGGTGTGACAATCCTGCCGCCCTGGCAAGGCGTATGGGCCAGGAGGGGCACGGCACAATCCTGCCGCCCTaGCAAGGCGTATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RCDNPAALARRMGQEGHGTILPP*QGVWAR
Trigger: CCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGT...GCCGTGCCCCTCCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGTCACACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ATGTCCTGCAGGCGCTGGCGGCCCAGGGCCGAGCGGATGGATCTCCGGCACAGGTGCCAGGTCTGCGGTTaGGCCTCCTGGGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: MSCRRWRPRAERMDLRHRCQVCG*ASWEQS
Trigger: AGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCA...CCTGTGCCGGAGATCCATCCGCTCGGCCCTGGGCCGCCAGCGCCTGCAGGACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR TCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGGCAGGGGCAGGGAGCTaGTGTCCTGCAGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGAGAGS*CPAGAG
Trigger: GCCAGCGCCTGCAGGACATCAGCTCCCTGCCCCTGC...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGGCAGGGGCAGGGAGCTaGTGTCCTGCAGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWAGAGS*CPAGAG
Trigger: GCCAGCGCCTGCAGGACATCAGCTCCCTGCCCCTGC...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp CCCAGGGCCGAGCGGATGGATCTCCGGCACAGGTCCATCAGTGGCAGGGGCTCGAGTCCTAAAACGGTGTaGCAATCCTGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRAERMDLRHRSISGRGSSPKTV*QSCRPG
Trigger: GCCAGGGCGGCAGGATTGTCACACCGTTTTAGGACT...CGAGCCCCTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR GCA 90 bp GCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGTCGGGGTTCCACGCGTaGCGCAGCTGCACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ADSRLSVAPKEVSDLGGLSGFHA*RSCTAS
Trigger: GCTGGCTGTGCAGCTGCGGCACGCGTGGAACCCCGA...CAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp GGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGTTGATCTGCCAGGCGTaGAGGCCGCGGGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GSSSIPARGPGSEQVENVLICQA*RPRAWP
Trigger: GGGCCACGCCCGCGGCCTGCACGCCTGGCAGATCAA...CACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp CGGTGTGACAATCCTGCCGCCCTGGCAAGGCGTATGGGCCAGGAGGGGCACGGCCTGACTTGGGAGGGCTaGCTCGAGGGCAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: RCDNPAALARRMGQEGHGLTWEG*LEGSRY
Trigger: GTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAG...GCCGTGCCCCTCCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGTCACACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAAAGCGGTAGCAGCAGCTaGGGCCCGGGCCCGGGATGT +
Preference number: 4 (lower is better)
Translates to: QPCRTLNGRCPETLTLQESGSSS*GPGPGC
Trigger: ACATCCCGGGCCCGGGCCCCAGCTGCTGCTACCGCT...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGGGCATGTCCAACAGCTaGTCCAGCCGCGCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGGMSNS*SSRAGR
Trigger: GCGGCCGGCGCGGCTGGACCAGCTGTTGGACATGCC...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp CATGGGACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGCCCTGGCAAGGCGTATaGGCCAGGAGGGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: HGTVNDRRVGPCGVCLCLPWQGV*ARRGTA
Trigger: CGCCGTGCCCCTCCTGGCCCATACGCCTTGCCAGGG...CAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGTCAGGGGCGCCCGAGTaGCCCGCAAATGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWSGAPE*PANAGS
Trigger: AGAGCCGGCATTTGCGGGTCACTCGGGCGCCCCTGA...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp GCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGCCCTGGAGAGGGGTCTaGTGCCGCCGCCGCCCACTC +
Preference number: 4 (lower is better)
Translates to: AVGPPGNSLSKWHRVLKRPWRGV*CRRRPL
Trigger: GAGTGGGCGGCGGCGGCAGCAGACCCCTCTCCAGGG...CCGTTTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGCCCCGTAGCCAGGAATaGGCCACGGGGCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWPRSQE*ATGLGT
Trigger: GGTTCCCAGCCCCGTGGCCCATTCCTGGCTACGGGG...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp CTGGCGGCCCAGGGCCGAGCGGATGGATCTCCGGCACAGGTCCATCAGTGGCAGGAAACATATAAGAGGTaGCAGCAGCAGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LAAQGRADGSPAQVHQWQETYKR*QQQWRR
Trigger: CCGCCGCCACTGCTGCTGCCACCTCTTATATGTTTC...CTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGGGCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR TCA 90 bp CTGGCGGCCCAGGGCCGAGCGGATGGATCTCCGGCACAGGTCCATCAGTGGCAGCAGACTCATCTTCCCTaGAGAGAGGTGTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LAAQGRADGSPAQVHQWQQTHLP*REVSGH
Trigger: ATGCCCAGACACCTCTCTTCAGGGAAGATGAGTCTG...CTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGGGCCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR GCA 90 bp GCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGCGGGGAGGAGGCCGCTaGAGGCCACCGCTACCTCGT +
Preference number: 4 (lower is better)
Translates to: AVGPPGNSLSKWHRVLKRRGGGR*RPPLPR
Trigger: ACGAGGTAGCGGTGGCCTGCAGCGGCCTCCTCCCCG...CCGTTTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGTGGCCCATGCTTCACTaGGGGGAGGAGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWWPMLH*GEEAAA
Trigger: TGCAGCGGCCTCCTCCCCGCAGTGAAGCATGGGCCA...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp GTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAACGCGGATGCCGTCGGTaGTCTGGGCCACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VCGWASWEQSLKVAQSPKRGCRR*SGPRGA
Trigger: GGCACCCCGTGGCCCAGAGCACCGACGGCATCCGCG...TTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp CACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTAGCACCTTTGGAGGGCGTGGCCCACCTTaGCGCGGATGCCGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: HIRLGCHNAPSSPVSTFGGRGPP*RGCRRC
Trigger: GCACCGACGGCATCCGCGGCAAGGTGGGCCACGCCC...TCCAAAGGTGCTAACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAACGTTCTTGGCGAAGTTaGCGCTCAGGCGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: QPCRTLNGRCPETLTLQERSWRS*RSGAGG
Trigger: ACCCCCGGCGCCTGAGCGCCAACTTCGCCAAGAACG...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GTATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCATGTCCTGCAGGCGCTaGCGGCCCAGGGCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: VWARRGTASGFHHSLFRGMSCRR*RPRAER
Trigger: CCGCTCGGCCCTGGGCCGCCAGCGCCTGCAGGACAT...GCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp ACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGCCTCGCACCTCCACTGACTTaGGGCTCCCCGAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TPGSLWLRRRCLTWEGCLAPPLT*GSPRAS
Trigger: AGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGC...GAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR TCA 90 bp ATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAAGGCCCTGTGCCATGGGACTGTaGATGACAGGAGGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: MPHPEWTLPRDPDTPGRPCAMGL*MTGGSG
Trigger: GCCCGACCCTCCTGTCATTCACAGTCCCATGGCACA...GGGCCTTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGTCCGAAGGAGGTGTCTaGCTTGGGAGGGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWSEGGV*LGRAAS
Trigger: CGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGA...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp TGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAGTTGCCCAGAGACCCTaGCACTCCAGGAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CLGIQRTVSQWLGRGARGVAQRP*HSRKAP
Trigger: GGGGGCCTTCCTGGAGTGTCAGGGTCTCTGGGCAAC...TCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp ACTTGGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTCAGCCTCTACCGGGCTaGGGCAGGGGCCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TWEGCLEGSRYCWQETFRQPLPG*GRGPSS
Trigger: GGAGCTTGGGCCCCTGCCGCAGCCCGGTAGAGGCTG...ACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp TCCCTGGCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTCACGCGTGCCGCAGCTaGACAGCCAGCCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SLALSATGHTIESLLPKCHACRS*TASPAA
Trigger: AGCGGCGGGGCTGGCTGTGCAGCTGCGGCACGCGTG...ACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGCCCGGGCCCGGGATGTaGTGTGTTCATCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AVGPPGNSLSKWHRVLKRPGPGM*CVHRPP
Trigger: GGGAGGGCGATGAACACACCACATCCCGGGCCCGGG...CCGTTTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGTTACTGAAGCGATCCTaGGGGCGCTCCAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWLLKRS*GRSKAR
Trigger: GCGGGCCTTGGAGCGCCCCCAGGATCGCTTCAGTAA...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp CCCAACCCAGGACACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTAGGTCCTGGACTCCCTaGAGAGGGGTCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PNPGHIRLGCHNAPSSPVRSWTP*RGVCCR
Trigger: GCGGCAGCAGACCCCTCTCCAGGGAGTCCAGGACCT...AACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTGGGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAACTCCCCGAGAGCTTCTaGCCCATGCTTCACTGCGGG +
Preference number: 4 (lower is better)
Translates to: QPCRTLNGRCPETLTLQELPESF*PMLHCG
Trigger: CCCGCAGTGAAGCATGGGCCAGAAGCTCTCGGGGAG...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAATGTCCTGCAGGCGCTaGCGGCCCAGGGCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQMSCRR*RPRAER
Trigger: CCGCTCGGCCCTGGGCCGCCAGCGCCTGCAGGACAT...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGACAATCCTGCCGCCCTaGCAAGGCGTATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGTILPP*QGVWAR
Trigger: CCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGT...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp ACTTGGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTGGAAGCTTGGCGCCTaGCCCGGAGGGCGACGAGTC +
Preference number: 4 (lower is better)
Translates to: TWEGCLEGSRYCWQETFRWKLGA*PGGRRV
Trigger: GACTCGTCGCCCTCCGGGTCAGGCGCCAAGCTTCCA...ACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR TCA 90 bp ACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGCCTCGCATCCAGAGAACTGTaGGTCAGTGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TPGSLWLRRRCLTWEGCLASREL*VSGWEG
Trigger: CCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGC...GAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGAGCCATGCCGCACCCTaGATGGACGTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGSHAAP*MDVAQR
Trigger: TCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCT...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp ACGTTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGCGTGGGTGCCGCGCTaGCGAGCCGGCCAGTTGATC +
Preference number: 4 (lower is better)
Translates to: TFKEVSRKVSPHCTVHLPAWVPR*RAGQLI
Trigger: GATCAACTGGCCGGCTCGGCAGCGCGGCACCCACGC...TGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp AAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTCTGAGGGAGCTGATGTCCTaGAGGCGCTGGCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KEVSRKVSPHCTVHLPGLRELMS*RRWRPR
Trigger: CCTGGGCCGCCAGCGCCTGCAGGACATCAGCTCCCT...CAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGCAGCAGCAGCATTCCTaGGAGAGGACCAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWQQQHS*ERTRLG
Trigger: TCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTG...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGCCGAGATCGTGCCACTaGACTTTGGCCAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: GSSSIPARGPGSEQVENVPRSCH*TLARAT
Trigger: GGTTGCCCTGGCCAAAGTGCAGTGGCACGATCTCGG...CACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR CCA 90 bp CACTTGCCAGGTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGGGTCGGGCCTGGAGTaGGGAAGCGCCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: HLPGLRLGLLGTVSQSGTGSGLE*GSALLK
Trigger: CTTCAGTAAGGCGCTTCCCCACTCCAGGCCCGACCC...TGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGGCCACCGCTACCTCGTaGGAGCCTCCACTCCCCGTA +
Preference number: 4 (lower is better)
Translates to: AVGPPGNSLSKWHRVLKRATATS*EPPLPV
Trigger: TACGGGGAGTGGAGGCTCCCACGAGGTAGCGGTGGC...CCGTTTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GTGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGGCCACGCCCAGGTACTaGCCATCCACGATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VSGHPENCESVAGKGSTWATPRY*PSTMKL
Trigger: CAGCTTCATCGTGGATGGCCAGTACCTGGGCGTGGC...CCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp CCCAACCCAGGACACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTAGGAGGTGTCTGACTTaGGAGGGCTGCCTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PNPGHIRLGCHNAPSSPVRRCLT*EGCLEG
Trigger: GCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCT...AACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTGGGTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp TCCCTGGCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTCCCTGGCAAGGCGTATaGGCCAGGAGGGGCACGGCG +
Preference number: 4 (lower is better)
Translates to: SLALSATGHTIESLLPKCPWQGV*ARRGTA
Trigger: CGCCGTGCCCCTCCTGGCCCATACGCCTTGCCAGGG...ACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGTGCCAGGTCTGCGGTTaGGCCTCCTGGGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGCQVCG*ASWEQS
Trigger: AGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCA...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CAA 72 bp GTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTaGCCAGGTCTGCGGTTGGGCCTCCTGGGAACAGTC +
Preference number: 4 (lower is better)
Translates to: VSRKVSPHCTVH*PGLRLGLLGTV
Trigger: GACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp CATGGGACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGCTCCCTGGCCCTGTCTaGAACGGGGCACACAATAGA +
Preference number: 4 (lower is better)
Translates to: HGTVNDRRVGPCGVCLCLLPGPV*NGAHNR
Trigger: TCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGAG...CAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp AGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGTCTCCCACTGCACTGTCCACTTaGCAGGTCTGCGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSIPARGPGSEQVENVSPTALST*QVCGWA
Trigger: GGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGT...GGGAGACACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp TGTCTGGGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAACTGCACTGTCCACTTaGCAGGTCTGCGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: CLGIQRTVSQWLGRGARGTALST*QVCGWA
Trigger: GGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGT...TCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp AGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGTCTCCCTTCATCGCCCTCCCCTaGGGCTGGGTGCTTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SSIPARGPGSEQVENVSPFIALP*GWVLLC
Trigger: GCACAAAAGCACCCAGCCCCAGGGGAGGGCGATGAA...GGGAGACACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GTATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCACACCAACTACAGCGTaGGTGCCGCGCTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VWARRGTASGFHHSLFRGTPTTA*VPRCRA
Trigger: GGCTCGGCAGCGCGGCACCCACGCTGTAGTTGGTGT...GCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTCTGCGGTTGGGCCTCCGCTGCCCATCAGGCTTaGCTCACTGGTACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GRCLHTALSTCQVCGWASAAHQA*LTGTAD
Trigger: ATCTGCAGTACCAGTGAGCCAAGCCTGATGGGCAGC...GGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGCCTCCTGTGTCCTGGTTGGTaGCAGGATTTCCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TPGSLWLRRRCLTWEGCLLCPGW*QDFQEV
Trigger: CACCTCCTGGAAATCCTGCCACCAACCAGGACACAG...GAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGGAAACATATAAGAGGTaGCAGCAGCAGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: ADSRLSVAPKEVSDLGGLETYKR*QQQWRR
Trigger: CCGCCGCCACTGCTGCTGCCACCTCTTATATGTTTC...CAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GGATTTCCAGGAGGTGCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGCACAGGTCCATCAGTaGCAGGGGCTCGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GFPGGADSRLSVAPKEVSAQVHQ*QGLGCS
Trigger: ACTACAGCCGAGCCCCTGCCACTGATGGACCTGTGC...AGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCACCTCCTGGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR TCA 90 bp TATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGAGGTGTTCTTCCCCAGCGCCCTaGGCGCACGCAGCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: YALPWGKPVRLIFPEERCSSPAP*AHAAVA
Trigger: TGCTACCGCTGCGTGCGCTCAGGGCGCTGGGGAAGA...ACACCTCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR TCA 90 bp ACGTTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGGGAAGCGCCTTACTaGAGCGATCCTGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: TFKEVSRKVSPHCTVHLPGEAPY*SDPGGA
Trigger: AGCGCCCCCAGGATCGCTTCAGTAAGGCGCTTCCCC...TGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR TCA 90 bp GGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGGTGGCAGGATTTCCACTCTCGCACCTCCACTaGCTTGAGGCTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: GSLINTVAAVSWLVAGFPLSHLH*LEAPRE
Trigger: CTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCGAGAG...TGGAAATCCTGCCACCAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR TCA 90 bp GCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAGAGTCCTAAAACGGTGTGCCATGGGACTGTaGATGACAGGAGGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: AVGPPGNSLSKWHRVLKRCAMGL*MTGGSG
Trigger: GCCCGACCCTCCTGTCATTCACAGTCCCATGGCACA...CCGTTTTAGGACTCTGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp CGGAGGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAAAGGAAACAGGCTCTCTaGTCAATACGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRQQQHSCERTRLGAGRERKQAL*SIRWLL
Trigger: CAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCT...TTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GCAGGTAGAGAATGTGTCTCCCATATCCACCCTTCCAGTCACAAGGCTGCCCCCAGAGCTTCTGGCCCATaGTTCACTGCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AGRECVSHIHPSSHKAAPRASGP*FTAGRR
Trigger: CCTCCTCCCCGCAGTGAAGCATGGGCCAGAAGCTCT...GGGGGCAGCCTTGTGACTGGAAGGGTGGATATGGGAGACACATTCTCTACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp AGTTCCCCCGTTAGCACCTTTGGACTAAGTACTGTCCTCTCCGCATTCCTCTTTCAACTACAGCGTGGGTaGCGCGCTGCCGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SSPVSTFGLSTVLSAFLFQLQRG*RAAEPA
Trigger: GGCCGGCTCGGCAGCGCGGCACCCACGCTGTAGTTG...AAAGAGGAATGCGGAGAGGACAGTACTTAGTCCAAAGGTGCTAACGGGGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAGGGGAGCACGGGCCGTaGCCACACCAACTACAGCGT +
Preference number: 4 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQGEHGP*PHQLQR
Trigger: ACGCTGTAGTTGGTGTGGCCACGGCCCGTGCTCCCC...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGCTGTGTCCTGGTTGGTaGCAGGATTTCCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGLCPGW*QDFQEV
Trigger: CACCTCCTGGAAATCCTGCCACCAACCAGGACACAG...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGTGCTGCCTGCTGTGTCCTGGTTaGTGGCAGGATTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TVNDRRVGPCGVCLCLCCLLCPG*WQDFQE
Trigger: CTCCTGGAAATCCTGCCACCAACCAGGACACAGCAG...GCAGCACAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GGCAGCAGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGGTGGCTGCTGTGTCCTaGTTGGTGGCAGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: GSSSIPARGPGSEQVENVVAAVS*LVAGFP
Trigger: TGGAAATCCTGCCACCAACCAGGACACAGCAGCCAC...CACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp TATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGAGGTGTCGAGTGACCCGCAAATaGCGGCTCTCTCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: YALPWGKPVRLIFPEERCRVTRK*RLSPHG
Trigger: GCCGTGCGGAGAGAGCCGGCATTTGCGGGTCACTCG...ACACCTCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAACGACTCGGCGTCACTaGCTACCAGCGCCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQTTRRH*LPAPCS
Trigger: GCTACACGGCGCTGGTAGGCAGTGACGCCGAGTCGT...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR GCA 90 bp GTATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCTCCACTTGCCAGGTCTaGGGTTGGGCCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VWARRGTASGFHHSLFRGSTCQV*GWASWE
Trigger: TTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGA...GCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ACTTGGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTGCCACGCCCAGGTACTaGCCATCCACGATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TWEGCLEGSRYCWQETFRATPRY*PSTMKL
Trigger: CAGCTTCATCGTGGATGGCCAGTACCTGGGCGTGGC...ACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAAATTTTCCCCCTGCACTaGCTAATTTCTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QPCRTLNGRCPETLTLQEIFPLH*LISPWP
Trigger: GGGCCAGGGAGAAATTAGCCAGTGCAGGGGGAAAAT...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp CACTTGCCAGGTCTGCGGTTGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACAAGAACTGTGAGTCAGTaGCTGGGAAGGGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: HLPGLRLGLLGTVSQSGTRTVSQ*LGRGAR
Trigger: ACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCT...TGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGGGATATGCTCTTCCCTaGGGCAAACCAGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGGYALP*GKPVRL
Trigger: GAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCC...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
3UTR CAA 72 bp TCTCCACACTGCACTGTCCACTTGCCAGGTCTGCGGTaGGGCCTCCTGGGAACAGTCTCTCAAAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: SPHCTVHLPGLR*GLLGTVSQSGT
Trigger: TGTGCCACTTTGAGAGACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp TTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTACAGCTTCTTGCCCTTaGGACCTCGGAAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: FKEVSRKVSPHCTVHLPGTASCP*DLGRPR
Trigger: GCGTGGCCTTCCGAGGTCTCAAGGGCAAGAAGCTGT...ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp GGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGGTGGCAGGATTTCCAGCATCCAGAGAACTGTaGGTCAGTGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSLINTVAAVSWLVAGFPASREL*VSGWEG
Trigger: CCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGC...TGGAAATCCTGCCACCAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp TTGAATAAGGAAACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGAGCCGCTTGGAAGCTTaGCGCCTGACCCGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LNKETGSLINTVAAVSWLSRLEA*RLTRRA
Trigger: CGCCCTCCGGGTCAGGCGCCAAGCTTCCAAGCGGCT...CAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCTTATTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp CCAGTTAAAAATGAGTCTGGGCAGAGAGTGTCTGAAACATATAAGAGGTGGCAGTGCAGGCCGCGGGCGTaGCCCACCTTGCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: PVKNESGQRVSETYKRWQCRPRA*PTLPRM
Trigger: CATCCGCGGCAAGGTGGGCCACGCCCGCGGCCTGCA...CTGCCACCTCTTATATGTTTCAGACACTCTCTGCCCAGACTCATTTTTAACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GGATTTCCAGGAGGTGCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTATTTTCCCCCTGCACTaGCTAATTTCTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GFPGGADSRLSVAPKEVSIFPLH*LISPWP
Trigger: GGGCCAGGGAGAAATTAGCCAGTGCAGGGGGAAAAT...AGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGCACCTCCTGGAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp CCAGTTAAAAATGAGTCTGGGCAGAGAGTGTCTGAAACATATAAGAGGTGGCAGGCCGAGCCGGCCAGTTaGTCTGCCAGGCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PVKNESGQRVSETYKRWQAEPAS*SARRAG
Trigger: GCCTGCACGCCTGGCAGATCAACTGGCCGGCTCGGC...CTGCCACCTCTTATATGTTTCAGACACTCTCTGCCCAGACTCATTTTTAACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR TCA 90 bp TTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTAGTCCTAAAACGGTGTaGCAATCCTGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FKEVSRKVSPHCTVHLPGSPKTV*QSCRPG
Trigger: GCCAGGGCGGCAGGATTGTCACACCGTTTTAGGACT...ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp GGGGCTCTGATATCCCACTGCTGTGATGATTTCCAGTTAAAAATGAGTCTGGGCGTTGCCCAGAGACCCTaGCACTCCAGGAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GALISHCCDDFQLKMSLGVAQRP*HSRKAP
Trigger: GGGGGCCTTCCTGGAGTGTCAGGGTCTCTGGGCAAC...GCCCAGACTCATTTTTAACTGGAAATCATCACAGCAGTGGGATATCAGAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp ACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAGGGAGCTGATGTCCTaGAGGCGCTGGCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVGKRPFVSKVGTTSWSLRELMS*RRWRPR
Trigger: CCTGGGCCGCCAGCGCCTGCAGGACATCAGCTCCCT...CAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp CATGGGACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGATCCTTTCCCCTATGTaGCATGGGACTGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: HGTVNDRRVGPCGVCLCLILSPM*HGTVND
Trigger: GTCATTCACAGTCCCATGGCACATAGGGGAAAGGAT...CAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp ATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAAGGCCCATAATGGTAAGGATATaGTCTTCCCTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: MPHPEWTLPRDPDTPGRPIMVRI*SSLGQT
Trigger: GGTTTGCCCCAGGGAAGAGCATATCCTTACCATTAT...GGGCCTTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp AAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTCTGACCCTGAATGGACGTTaGCCAGAGACCCTGACACTC +
Preference number: 4 (lower is better)
Translates to: KEVSRKVSPHCTVHLPGLTLNGR*PETLTL
Trigger: GAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGT...CAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GTATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCTTCCAGTCACAAGGCTaGCCCCATGGACCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: VWARRGTASGFHHSLFRGFQSQG*PHGPQA
Trigger: AGCTTGAGGTCCATGGGGGCAGCCTTGTGACTGGAA...GCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAACTCTGCGCTGCAGGATaGCCTGGAGTTAGGAGCGTT +
Preference number: 4 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQLCAAG*PGVRSV
Trigger: AACGCTCCTAACTCCAGGCCATCCTGCAGCGCAGAG...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp GGGGCTCTGATATCCCACTGCTGTGATGATTTCCAGTTAAAAATGAGTCTGGGCCCAGGGCCGAGCGGATaGATCTCCGGCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GALISHCCDDFQLKMSLGPGPSG*ISGTGP
Trigger: TGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGG...GCCCAGACTCATTTTTAACTGGAAATCATCACAGCAGTGGGATATCAGAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ACGTTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAACTCCAGGCTCTCTGTaGCTCCGAAGGAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TFKEVSRKVSPHCTVHLPTPGSL*LRRRCL
Trigger: CAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGT...TGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp CACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTAGCACCTTTGGAAGAACTGTGAGTCAGTaGCTGGGAAGGGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: HIRLGCHNAPSSPVSTFGRTVSQ*LGRGAR
Trigger: ACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCT...TCCAAAGGTGCTAACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp AGTTCCCCCGTTAGCACCTTTGGACTAAGTACTGTCCTCTCCGCATTCCTCTTTACAGCTTCTTGCCCTTaGGACCTCGGAAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: SSPVSTFGLSTVLSAFLFTASCP*DLGRPR
Trigger: GCGTGGCCTTCCGAGGTCTCAAGGGCAAGAAGCTGT...AAAGAGGAATGCGGAGAGGACAGTACTTAGTCCAAAGGTGCTAACGGGGGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp ACTTGGGAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTCAGACTCATCTTCCCTaGAGAGAGGTGTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TWEGCLEGSRYCWQETFRQTHLP*REVSGH
Trigger: ATGCCCAGACACCTCTCTTCAGGGAAGATGAGTCTG...ACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAGTGTGTCTGTGTCTGTaGTGCCCATCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQVCLCL*CPSGLA
Trigger: AGCCAAGCCTGATGGGCAGCACAGACACAGACACAC...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp AAAATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTGCCGGGGGTCGGGCCTaGAGTGGGGAAGCGCCTTAC +
Preference number: 4 (lower is better)
Translates to: KIMVRICSSLGQTSQTHLAGGRA*SGEAPY
Trigger: GTAAGGCGCTTCCCCACTCCAGGCCCGACCCCCGGC...AAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp AATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCAGCGCTGGCAGGTCCTaGACTCCCTGGAGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: NNGKDMLFPGANQSDSSSSAGRS*TPWRGV
Trigger: GACCCCTCTCCAGGGAGTCCAGGACCTGCCAGCGCT...GGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp AATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCAGCCAGCCCCGCCGCTaGCATGTCCAACAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: NNGKDMLFPGANQSDSSSSQPRR*HVQQLV
Trigger: GACCAGCTGTTGGACATGCCAGCGGCGGGGCTGGCT...GGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp AAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAAAGAACTGGCCACGGGGTGCCGGTaGAAGGTGAGCCGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: KRPFVSKVGTTSWSLKELATGCR*KVSRSS
Trigger: CGACGACCGGCTCACCTTCCACCGGCACCCCGTGGC...CAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp AAAATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTATGCCGTCGGTGCTCTaGGCCACGGGGTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: KIMVRICSSLGQTSQTHLMPSVL*ATGCRW
Trigger: CCACCGGCACCCCGTGGCCCAGAGCACCGACGGCAT...AAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp ACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGCCAGGGCCGAGCGGATaGATCTCCGGCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TVGKRPFVSKVGTTSWSLPGPSG*ISGTGP
Trigger: TGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGG...CAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ACGTTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGCTGCCCATCAGGCTTaGCTCACTGGTACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TFKEVSRKVSPHCTVHLPAAHQA*LTGTAD
Trigger: ATCTGCAGTACCAGTGAGCCAAGCCTGATGGGCAGC...TGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp CATGGGACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGGGCAGTAGATACTGTTaGCAAGAGACCTTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: HGTVNDRRVGPCGVCLCLGSRYC*QETFRF
Trigger: GAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCC...CAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGGTGGCAGGATTTCCAAGGACACATCAGACTTaGGTGTCACAATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSLINTVAAVSWLVAGFPRTHQT*VSQCPQ
Trigger: CTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCT...TGGAAATCCTGCCACCAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp TTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTAGGAAACAGGCTCTCTaGTCAATACGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FKEVSRKVSPHCTVHLPGRKQAL*SIRWLL
Trigger: CAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCT...ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp ATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCAGCCATGCCGCACCCTaGATGGACGTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IMVRICSSLGQTSQTHLPSHAAP*MDVAQR
Trigger: TCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCT...GGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp TATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGAGGTGTGATCAATACGGTGGCTaGTGTGTCCTGGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YALPWGKPVRLIFPEERCDQYGG*CVLVGG
Trigger: GCCACCAACCAGGACACAGCAGCCACCGTATTGATC...ACACCTCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp AGTTCCCCCGTTAGCACCTTTGGACTAAGTACTGTCCTCTCCGCATTCCTCTTTCTCCCTGGCCCTGTCTaGAACGGGGCACACAATAGA +
Preference number: 4 (lower is better)
Translates to: SSPVSTFGLSTVLSAFLFLPGPV*NGAHNR
Trigger: TCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGAG...AAAGAGGAATGCGGAGAGGACAGTACTTAGTCCAAAGGTGCTAACGGGGGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAAAGGTGTCTCCACACTaGACTGTCCACTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQKVSPH*TVHLPG
Trigger: ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTT...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp TCCCTGGCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTAAGGTGTCTCCACACTaGACTGTCCACTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLALSATGHTIESLLPKCKVSPH*TVHLPG
Trigger: ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTT...ACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp TTGAATAAGGAAACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGCAGCAGCAGCATTCCTaGGAGAGGACCAGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: LNKETGSLINTVAAVSWLQQQHS*ERTRLG
Trigger: TCCGAGCCTGGTCCTCTCGCAGGAATGCTGCTGCTG...CAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCTTATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp ACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGTGCTGCGCTCTGATATCCCACTaGTGTGATGATTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: TVNDRRVGPCGVCLCLCCALISH*CDDFQL
Trigger: TAACTGGAAATCATCACAGCAGTGGGATATCAGAGC...GCAGCACAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAGGAGGTGTCTGACTTaGGAGGGCTGCCTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: TVGKRPFVSKVGTTSWSLRRCLT*EGCLEG
Trigger: GCCCTCGAGGCAGCCCTCCCAAGTCAGACACCTCCT...CAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp TCCCTGGCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTTCAAATAAAGCTTTGTaGCAGCCATGCCGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SLALSATGHTIESLLPKCSNKAL*QPCRTL
Trigger: CAGGGTGCGGCATGGCTGTCACAAAGCTTTATTTGA...ACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp AAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAAAGAACTGTCCGAAGGAGGTGTCTaGCTTGGGAGGGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: KRPFVSKVGTTSWSLKELSEGGV*LGRAAS
Trigger: CGAGGCAGCCCTCCCAAGTCAGACACCTCCTTCGGA...CAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR TCA 90 bp AAAATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTGCCAGGGCAACCGAGTaGGACTCCATGGTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KIMVRICSSLGQTSQTHLARATE*DSMVKA
Trigger: GGCCTTGACCATGGAGTCTCACTCGGTTGCCCTGGC...AAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR GCA 90 bp ATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCAAATCCTTTCCCCTATGTaGCATGGGACTGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: MGQEGHGVRLSSFIIQRQILSPM*HGTVND
Trigger: GTCATTCACAGTCCCATGGCACATAGGGGAAAGGAT...TTGCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp ACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGCTGACTTGGGAGGGCTaGCTCGAGGGCAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: TVGKRPFVSKVGTTSWSLLTWEG*LEGSRY
Trigger: GTATCTACTGCCCTCGAGGCAGCCCTCCCAAGTCAG...CAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp TTGAATAAGGAAACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGGATCAATACGGTGGCTaGTGTGTCCTGGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LNKETGSLINTVAAVSWLDQYGG*CVLVGG
Trigger: GCCACCAACCAGGACACAGCAGCCACCGTATTGATC...CAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCTTATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GGGGCTCTGATATCCCACTGCTGTGATGATTTCCAGTTAAAAATGAGTCTGGGCTTCCAGTCACAAGGCTaGCCCCATGGACCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GALISHCCDDFQLKMSLGFQSQG*PHGPQA
Trigger: AGCTTGAGGTCCATGGGGGCAGCCTTGTGACTGGAA...GCCCAGACTCATTTTTAACTGGAAATCATCACAGCAGTGGGATATCAGAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp AAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAAAGAACTGGCACAGGTCCATCAGTaGCAGGGGCTCGGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: KRPFVSKVGTTSWSLKELAQVHQ*QGLGVK
Trigger: CTTGACCCCGAGCCCCTGCCACTGATGGACCTGTGC...CAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CCA 90 bp AATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCACTCCAGGCTCTCTGTaGCTCCGAAGGAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NNGKDMLFPGANQSDSSSTPGSL*LRRRCL
Trigger: CAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGT...GGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp ATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCCTGCTGTGTCCTGGTTaGTGGCAGGATTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IMVRICSSLGQTSQTHLPLLCPG*WQDFQE
Trigger: CTCCTGGAAATCCTGCCACCAACCAGGACACAGCAG...GGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GGGGCTCTGATATCCCACTGCTGTGATGATTTCCAGTTAAAAATGAGTCTGGGCGTGGCTGCTGTGTCCTaGTTGGTGGCAGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: GALISHCCDDFQLKMSLGVAAVS*LVAGFP
Trigger: TGGAAATCCTGCCACCAACCAGGACACAGCAGCCAC...GCCCAGACTCATTTTTAACTGGAAATCATCACAGCAGTGGGATATCAGAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTTTTATTATGCCGCACCCTGAATaGACGTTGCCCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: ALSATGHTIESLLPKCFIMPHPE*TLPRDP
Trigger: AGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCAT...AATAAAACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp TTGAATAAGGAAACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGAGAGGCAGTGCTGTCTaGGGCTCTGATATCCCACTG +
Preference number: 4 (lower is better)
Translates to: LNKETGSLINTVAAVSWLRGSAV*GSDIPL
Trigger: CAGTGGGATATCAGAGCCCCAGACAGCACTGCCTCT...CAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCTTATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp AATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCTGTCTGTGTCTGTGCTaGCCATCAGGCTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: NNGKDMLFPGANQSDSSSCLCLC*PSGLAH
Trigger: GTGAGCCAAGCCTGATGGGCAGCACAGACACAGACA...GGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp ACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGTGTCTGTGTCTGTGCTaGCCATCAGGCTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TVGKRPFVSKVGTTSWSLCLCLC*PSGLAH
Trigger: GTGAGCCAAGCCTGATGGGCAGCACAGACACAGACA...CAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp TTCCAGTTAAAAATGAGTCTGGGCAGAGAGTGTCTGAAACATATAAGAGGTGGCTCCACTTGCCAGGTCTaGGGTTGGGCCTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FQLKMSLGRECLKHIRGGSTCQV*GWASWE
Trigger: TTCCCAGGAGGCCCAACCGCAGACCTGGCAAGTGGA...GCCACCTCTTATATGTTTCAGACACTCTCTGCCCAGACTCATTTTTAACTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTTTTATTACCCTGAATGGACGTTaGCCAGAGACCCTGACACTC +
Preference number: 4 (lower is better)
Translates to: ALSATGHTIESLLPKCFITLNGR*PETLTL
Trigger: GAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGT...AATAAAACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp CACATCAGACTTGGGTGTCACAATGCCCCCAGTTCCCCCGTTAGCACCTTTGGAGTTGGTACCACATCCTaGTCTTTGAAAGAACTGAGT +
Preference number: 4 (lower is better)
Translates to: HIRLGCHNAPSSPVSTFGVGTTS*SLKELS
Trigger: ACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAAC...TCCAAAGGTGCTAACGGGGGAACTGGGGGCATTGTGACACCCAAGTCTGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTTTTATTGGATATGCTCTTCCCTaGGGCAAACCAGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: ALSATGHTIESLLPKCFIGYALP*GKPVRL
Trigger: GAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCC...AATAAAACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp TTCCAGTTAAAAATGAGTCTGGGCAGAGAGTGTCTGAAACATATAAGAGGTGGCATGCCGCACCCTGAATaGACGTTGCCCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: FQLKMSLGRECLKHIRGGMPHPE*TLPRDP
Trigger: AGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCAT...GCCACCTCTTATATGTTTCAGACACTCTCTGCCCAGACTCATTTTTAACTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp TATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGAGGTGTGTTGGTACCACATCCTaGTCTTTGAAAGAACTGAGT +
Preference number: 4 (lower is better)
Translates to: YALPWGKPVRLIFPEERCVGTTS*SLKELS
Trigger: ACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAAC...ACACCTCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp TTCCAGTTAAAAATGAGTCTGGGCAGAGAGTGTCTGAAACATATAAGAGGTGGCAGAGGCAGTGCTGTCTaGGGCTCTGATATCCCACTG +
Preference number: 4 (lower is better)
Translates to: FQLKMSLGRECLKHIRGGRGSAV*GSDIPL
Trigger: CAGTGGGATATCAGAGCCCCAGACAGCACTGCCTCT...GCCACCTCTTATATGTTTCAGACACTCTCTGCCCAGACTCATTTTTAACTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp AAAATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTAGGACACATCAGACTTaGGTGTCACAATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KIMVRICSSLGQTSQTHLRTHQT*VSQCPQ
Trigger: CTGGGGGCATTGTGACACCCAAGTCTGATGTGTCCT...AAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp AATAATGGTAAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCATAATGGTAAGGATATaGTCTTCCCTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: NNGKDMLFPGANQSDSSSIMVRI*SSLGQT
Trigger: GGTTTGCCCCAGGGAAGAGCATATCCTTACCATTAT...GGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTTACCATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CCA 90 bp GTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGGGCAGTAGATACTGTTaGCAAGAGACCTTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: VDTVGKRPFVSKVGTTSWGSRYC*QETFRF
Trigger: GAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCC...CCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGTATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR GCA 90 bp GTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGGCTCTGATATCCCACTaGTGTGATGATTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: VDTVGKRPFVSKVGTTSWALISH*CDDFQL
Trigger: TAACTGGAAATCATCACAGCAGTGGGATATCAGAGC...CCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGTATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS TCA 90 bp GGGCGCTCCAAGGCCCGCGCTCTAGCCGCTTGGAAGCTTGGCGCCTaGCCCGGAGGGCGACGAGTCCCGCGCTCAGGGCGCACGGGCCGC +
Preference number: 5 (lower is better)
Translates to: GRSKARALAAWKLGA*PGGRRVPRSGRTGR
Trigger: GCGGCCCGTGCGCCCTGAGCGCGGGACTCGTCGCCCTCCGGGTCAGGCGCCAAGCTTCCAAGCGGCTAGAGCGCGGGCCTTGGAGCGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS GCA 90 bp GCGTGGGTGCCGCGCTGCCGAGCCGGCCAGTTGATCTGCCAGGCGTaGAGGCCGCGGGCGTGGCCCACCTTGCCGCGGATGCCGTCGGTG +
Preference number: 5 (lower is better)
Translates to: AWVPRCRAGQLICQA*RPRAWPTLPRMPSV
Trigger: CACCGACGGCATCCGCGGCAAGGTGGGCCACGCCCGCGGCCTGCACGCCTGGCAGATCAACTGGCCGGCTCGGCAGCGCGGCACCCACGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp CTCGGGGTTCCACGCGTGCCGCAGCTGCACAGCCAGCCCCGCCGCTaGCATGTCCAACAGCTGGTCCAGCCGCGCCGGCCGCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LGVPRVPQLHSQPRR*HVQQLVQPRRPPGL
Trigger: GAGCCCGGGCGGCCGGCGCGGCTGGACCAGCTGTTGGACATGCCAGCGGCGGGGCTGGCTGTGCAGCTGCGGCACGCGTGGAACCCCGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp AGGCCGCGGGCGTGGCCCACCTTGCCGCGGATGCCGTCGGTGCTCTaGGCCACGGGGTGCCGGTGGAAGGTGAGCCGGTCGTCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RPRAWPTLPRMPSVL*ATGCRWKVSRSSSL
Trigger: CAAGGACGACGACCGGCTCACCTTCCACCGGCACCCCGTGGCCCAGAGCACCGACGGCATCCGCGGCAAGGTGGGCCACGCCCGCGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS TCA 90 bp CAAATGCCGGCTCTCTCCGCACGGCCAGGGGCGCGTCCTCACGGCTaGTGCCCGGCAGCAGCGCCCCCTCTGCGCTGCAGGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QMPALSARPGARPHG*CPAAAPPLRCRMAW
Trigger: CCAGGCCATCCTGCAGCGCAGAGGGGGCGCTGCTGCCGGGCATCAGCCGTGAGGACGCGCCCCTGGCCGTGCGGAGAGAGCCGGCATTTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp GGCGTCTTCCCCAGCGCCCTGAGCGCACGCAGCGGTAGCAGCAGCTaGGGCCCGGGCCCGGGATGTGGTGTGTTCATCGCCCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: GVFPSALSARSGSSS*GPGPGCGVFIALPW
Trigger: CCAGGGGAGGGCGATGAACACACCACATCCCGGGCCCGGGCCCCAGCTGCTGCTACCGCTGCGTGCGCTCAGGGCGCTGGGGAAGACGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp ATCCTGGGGGCGCTCCAAGGCCCGCGCTCTAGCCGCTTGGAAGCTTaGCGCCTGACCCGGAGGGCGACGAGTCCCGCGCTCAGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: ILGALQGPRSSRLEA*RLTRRATSPALRAH
Trigger: GTGCGCCCTGAGCGCGGGACTCGTCGCCCTCCGGGTCAGGCGCCAAGCTTCCAAGCGGCTAGAGCGCGGGCCTTGGAGCGCCCCCAGGAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS TCA 90 bp CCCGCTTGGCCGGCCGCAGCGCCGGCTCTCGCACCTCCACTGACTTaGGGCTCCCCGAGAGCTTCTGGCCCATGCTTCACTGCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PAWPAAAPALAPPLT*GSPRASGPCFTAGR
Trigger: CCTCCCCGCAGTGAAGCATGGGCCAGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCGAGAGCCGGCGCTGCGGCCGGCCAAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS TCA 90 bp CAGCTCCCGCTTGGCCGGCCGCAGCGCCGGCTCTCGCACCTCCACTaGCTTGAGGCTCCCCGAGAGCTTCTGGCCCATGCTTCACTGCGG +
Preference number: 5 (lower is better)
Translates to: QLPLGRPQRRLSHLH*LEAPRELLAHASLR
Trigger: CCGCAGTGAAGCATGGGCCAGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCGAGAGCCGGCGCTGCGGCCGGCCAAGCGGGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp AGGGCAAGCGCCTGTTCGGGAAGAATCCCCAGCGCTGGCAGGTCCTaGACTCCCTGGAGAGGGGTCTGCTGCCGCCGCCGCCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: RASACSGRIPSAGRS*TPWRGVCCRRRPLR
Trigger: CCTGAGTGGGCGGCGGCGGCAGCAGACCCCTCTCCAGGGAGTCCAGGACCTGCCAGCGCTGGGGATTCTTCCCGAACAGGCGCTTGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp GCCGGCTCTCGCACCTCCACTGACTTGAGGCTCCCCGAGAGCTTCTaGCCCATGCTTCACTGCGGGGAGGAGGCCGCTGCAGGCCACCGC +
Preference number: 5 (lower is better)
Translates to: AGSRTSTDLRLPESF*PMLHCGEEAAAGHR
Trigger: GCGGTGGCCTGCAGCGGCCTCCTCCCCGCAGTGAAGCATGGGCCAGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCGAGAGCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp TTCTTGGCGAAGTTGGCGCTCAGGCGCCGGGGGTCGGGCCTGGAGTaGGGAAGCGCCTTACTGAAGCGATCCTGGGGGCGCTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: FLAKLALRRRGSGLE*GSALLKRSWGRSKA
Trigger: GGCCTTGGAGCGCCCCCAGGATCGCTTCAGTAAGGCGCTTCCCCACTCCAGGCCCGACCCCCGGCGCCTGAGCGCCAACTTCGCCAAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp GGCCACCGCTACCTCGTGGGAGCCTCCACTCCCCGTAGCCAGGAATaGGCCACGGGGCTGGGAACCAGGCTTCCGGACGGTAGACCTCCA +
Preference number: 5 (lower is better)
Translates to: GHRYLVGASTPRSQE*ATGLGTRLPDGRPP
Trigger: TGGAGGTCTACCGTCCGGAAGCCTGGTTCCCAGCCCCGTGGCCCATTCCTGGCTACGGGGAGTGGAGGCTCCCACGAGGTAGCGGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 90 bp TCGTGGGAGCCTCCACTCCCCGTAGCCAGGAATGGGCCACGGGGCTaGGAACCAGGCTTCCGGACGGTAGACCTCCACAGCCTCTACCGG +
Preference number: 5 (lower is better)
Translates to: SWEPPLPVARNGPRG*EPGFRTVDLHSLYR
Trigger: CCGGTAGAGGCTGTGGAGGTCTACCGTCCGGAAGCCTGGTTCCCAGCCCCGTGGCCCATTCCTGGCTACGGGGAGTGGAGGCTCCCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp AGCAGCATTCCTGCGAGAGGACCAGGCTCGGAGCAGGTAGAGAATGTGTCTCCCTGGGGCTGGGTGCTTTaGTGCGCGGGGCGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: SSIPARGPGSEQVENVSPWGWVL*CAGRAG
Trigger: GCCGGCGCGCCCCGCGCACAAAAGCACCCAGCCCCA...GGGAGACACATTCTCTACCTGCTCCGAGCCTGGTCCTCTCGCAGGAATGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp ATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAAGGCCCGCGTTCTTGGCGAAGTaGGCGCTCAGGCGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: MPHPEWTLPRDPDTPGRPAFLAK*ALRRRG
Trigger: CCCCCGGCGCCTGAGCGCCAACTTCGCCAAGAACGC...GGGCCTTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp CTGGCGGCCCAGGGCCGAGCGGATGGATCTCCGGCACAGGTCCATCAGTGGCAGCACCCTGAATGGACGTaGCCCAGAGACCCTGACACT +
Preference number: 5 (lower is better)
Translates to: LAAQGRADGSPAQVHQWQHPEWT*PRDPDT
Trigger: AGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTG...CTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCCCTGGGCCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS-3UTR CAA 90 bp GAGGGCTGCCTCGAGGGCAGTAGATACTGTTGGCAAGAGACCTTTCGTTTCCAACGGGCGTGGCCCACCTaGCCGCGGATGCCGTCGGTG +
Preference number: 5 (lower is better)
Translates to: EGCLEGSRYCWQETFRFQRAWPT*PRMPSV
Trigger: CACCGACGGCATCCGCGGCAAGGTGGGCCACGCCCG...TTGGAAACGAAAGGTCTCTTGCCAACAGTATCTACTGCCCTCGAGGCAGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp GCAGACTCCAGGCTCTCTGTGGCTCCGAAGGAGGTGTCTGACTTGGGAGGGCTGCACTGCACTGTCCACTaGCCAGGTCTGCGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: ADSRLSVAPKEVSDLGGLHCTVH*PGLRLG
Trigger: GCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTG...CAGCCCTCCCAAGTCAGACACCTCCTTCGGAGCCACAGAGAGCCTGGAGTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp GGCATCCAGAGAACTGTGAGTCAGTGGCTGGGAAGGGGAGCACGTGGAAAGGGGTTGCCAGGTCTGCGGTaGGGCCTCCTGGGAACAGTC +
Preference number: 5 (lower is better)
Translates to: GIQRTVSQWLGRGARGKGLPGLR*GLLGTV
Trigger: GACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAA...CCCCTTTCCACGTGCTCCCCTTCCCAGCCACTGACTCACAGTTCTCTGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp ATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCAACCGCGCTCTAGCCGCTaGGAAGCTTGGCGCCTGACC +
Preference number: 5 (lower is better)
Translates to: MGQEGHGVRLSSFIIQRQPRSSR*EAWRLT
Trigger: GGTCAGGCGCCAAGCTTCCAAGCGGCTAGAGCGCGG...TTGCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp ATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCAATGCCGAGCCGGCCAGTaGATCTGCCAGGCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: MGQEGHGVRLSSFIIQRQCRAGQ*ICQACR
Trigger: CCTGCACGCCTGGCAGATCAACTGGCCGGCTCGGCA...TTGCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp CAGCCATGCCGCACCCTGAATGGACGTTGCCCAGAGACCCTGACACTCCAGGAAACCGGGTACAGCTTCTaGCCCTTGAGACCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: QPCRTLNGRCPETLTLQETGYSF*PLRPRK
Trigger: CTTCCGAGGTCTCAAGGGCAAGAAGCTGTACCCGGT...TTCCTGGAGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTGCGGCATGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp ACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGTGCTGCTGCTGCCCATCAGGCTaGGCTCACTGGTACTGCAGA +
Preference number: 5 (lower is better)
Translates to: TVNDRRVGPCGVCLCLCCCCPSG*AHWYCR
Trigger: TCTGCAGTACCAGTGAGCCAAGCCTGATGGGCAGCA...GCAGCACAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp CGGTGTGACAATCCTGCCGCCCTGGCAAGGCGTATGGGCCAGGAGGGGCACGGCCTTTCGTTTCCAAAGTaGGTACCACATCCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: RCDNPAALARRMGQEGHGLSFPK*VPHPGL
Trigger: AAGACCAGGATGTGGTACCAACTTTGGAAACGAAAG...GCCGTGCCCCTCCTGGCCCATACGCCTTGCCAGGGCGGCAGGATTGTCACACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp CATGGGACTGTGAATGACAGGAGGGTCGGGCCCTGCGGTGTGTGTCTGTGTCTGCAGGACACATCAGACTaGGGTGTCACAATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: HGTVNDRRVGPCGVCLCLQDTSD*GVTMPP
Trigger: TGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTG...CAGACACAGACACACACCGCAGGGCCCGACCCTCCTGTCATTCACAGTCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp TCCCTGGCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTTTGCCAGGTCTGCGGTaGGGCCTCCTGGGAACAGTC +
Preference number: 5 (lower is better)
Translates to: SLALSATGHTIESLLPKCLPGLR*GLLGTV
Trigger: GACTGTTCCCAGGAGGCCCAACCGCAGACCTGGCAA...ACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp AAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTCTGACCGGGTACAGCTTCTaGCCCTTGAGACCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: KEVSRKVSPHCTVHLPGLTGYSF*PLRPRK
Trigger: CTTCCGAGGTCTCAAGGGCAAGAAGCTGTACCCGGT...CAGACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS GCA 90 bp TTAACCAAAGCAAATCAGCTGGCTCCCGACCCTGTAAATAAAGGCTaGCGCCAGCCTGGCAGGGCATTGGCTCTCCCCGCTCACTTAAAC +
Preference number: 5 (lower is better)
Translates to: LTKANQLAPDPVNKG*RQPGRALALPAHLN
Trigger: GTTTAAGTGAGCGGGGAGAGCCAATGCCCTGCCAGGCTGGCGGCAGCCTTTATTTACAGGGTCGGGAGCCAGCTGATTTGCTTTGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508828.1
CDS-3UTR CAA 90 bp TTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTGAGTTAGGAGCGTTCTaGGCGAAGTTGGCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: FKEVSRKVSPHCTVHLPGELGAF*AKLALR
Trigger: CCTGAGCGCCAACTTCGCCAAGAACGCTCCTAACTC...ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp AAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGACGCACCTCCACTGACTaGAGGCTCCCCGAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: KDMLFPGANQSDSSSLKRRTSTD*RLPESF
Trigger: GAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCG...TCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp AAGGATATGCTCTTCCCTGGGGCAAACCAGTCAGACTCATCTTCCCTGAAGAGATCCTTGACGAAGACGTaGAGCGAGCGGTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KDMLFPGANQSDSSSLKRSLTKT*SERSSG
Trigger: CCCCGAGGACCGCTCGCTCAACGTCTTCGTCAAGGA...TCTCTTCAGGGAAGATGAGTCTGACTGGTTTGCCCCAGGGAAGAGCATATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp TTGAATAAGGAAACAGGCTCTCTGATCAATACGGTGGCTGCTGTGTCCTGGTTGCACTGCACTGTCCACTaGCCAGGTCTGCGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: LNKETGSLINTVAAVSWLHCTVH*PGLRLG
Trigger: GCCCAACCGCAGACCTGGCAAGTGGACAGTGCAGTG...CAACCAGGACACAGCAGCCACCGTATTGATCAGAGAGCCTGTTTCCTTATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp ATGGGCCAGGAGGGGCACGGCGTCAGGCTTTCATCATTCATTATTCAGAGGCAACAGGACACATCAGACTaGGGTGTCACAATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: MGQEGHGVRLSSFIIQRQQDTSD*GVTMPP
Trigger: TGGGGGCATTGTGACACCCAAGTCTGATGTGTCCTG...TTGCCTCTGAATAATGAATGATGAAAGCCTGACGCCGTGCCCCTCCTGGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS CCA 90 bp GCAAAGCTCACGCTGAGTTCACTGCTTTACAGAGGCCCCTTTTCTTaGCTGGACTGCCAGATGGTTCTTAGTAGACCCAGGGAACTCTAT +
Preference number: 5 (lower is better)
Translates to: AKLTLSSLLYRGPFS*LDCQMVLSRPRELY
Trigger: ATAGAGTTCCCTGGGTCTACTAAGAACCATCTGGCAGTCCAGCCAAGAAAAGGGGCCTCTGTAAAGCAGTGAACTCAGCGTGAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507895.1
CDS-3UTR CAA 90 bp TTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAAAGAACTGAGTGTCCTGAGCCGGTCGTCGTCCTaGACGAAGACGTTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: FVSKVGTTSWSLKELSVLSRSSS*TKTLSE
Trigger: CTCGCTCAACGTCTTCGTCAAGGACGACGACCGGCT...CAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS-3UTR CAA 90 bp ACTGTTGGCAAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGTACAGCTTCTTGCCCTaGAGACCTCGGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: TVGKRPFVSKVGTTSWSLYSFLP*RPRKAT
Trigger: CGTGGCCTTCCGAGGTCTCAAGGGCAAGAAGCTGTA...CAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTTGCCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp GCCCTGTCTGCAACGGGGCACACAATAGAAAGTCTCCTGCCTAAATGTTTTATTTGCTGCCCATCAGGCTaGGCTCACTGGTACTGCAGA +
Preference number: 5 (lower is better)
Translates to: ALSATGHTIESLLPKCFICCPSG*AHWYCR
Trigger: TCTGCAGTACCAGTGAGCCAAGCCTGATGGGCAGCA...AATAAAACATTTAGGCAGGAGACTTTCTATTGTGTGCCCCGTTGCAGACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp TTCAAAGAGGTAAGCCGGAAGGTGTCTCCACACTGCACTGTCCACTTGCCAGGTACCACATCCTGGTCTTaGAAAGAACTGAGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: FKEVSRKVSPHCTVHLPGTTSWS*KELSVL
Trigger: CAGGACACTCAGTTCTTTCAAAGACCAGGATGTGGT...ACCTGGCAAGTGGACAGTGCAGTGTGGAGACACCTTCCGGCTTACCTCTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS TCA 90 bp GGAAGATCTGACGAAGAAGGGCCATTAAGCGGCACAGCCTTTGCTTaGATTATGGAATGCCTCAGACAAGCAGCCTTATTAGTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: GRSDEEGPLSGTAFA*IMECLRQAALLVSG
Trigger: CCCAGACACTAATAAGGCTGCTTGTCTGAGGCATTCCATAATTCAAGCAAAGGCTGTGCCGCTTAATGGCCCTTCTTCGTCAGATCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508828.1
CDS GCA 90 bp ACGCTGAGTTCACTGCTTTACAGAGGCCCCTTTTCTTGGCTGGACTaGCAGATGGTTCTTAGTAGACCCAGGGAACTCTATGCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: TLSSLLYRGPFSWLD*QMVLSRPRELYAFL
Trigger: TAAGAAAGCATAGAGTTCCCTGGGTCTACTAAGAACCATCTGGCAGTCCAGCCAAGAAAAGGGGCCTCTGTAAAGCAGTGAACTCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507895.1
CDS-3UTR CAA 90 bp AAGAGACCTTTCGTTTCCAAAGTTGGTACCACATCCTGGTCTTTGAAAGAACTGTACAGCTTCTTGCCCTaGAGACCTCGGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: KRPFVSKVGTTSWSLKELYSFLP*RPRKAT
Trigger: CGTGGCCTTCCGAGGTCTCAAGGGCAAGAAGCTGTA...CAGTTCTTTCAAAGACCAGGATGTGGTACCAACTTTGGAAACGAAAGGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS-3UTR CAA 90 bp TTCCAGTTAAAAATGAGTCTGGGCAGAGAGTGTCTGAAACATATAAGAGGTGGCCACCCTGAATGGACGTaGCCCAGAGACCCTGACACT +
Preference number: 5 (lower is better)
Translates to: FQLKMSLGRECLKHIRGGHPEWT*PRDPDT
Trigger: AGTGTCAGGGTCTCTGGGCAACGTCCATTCAGGGTG...GCCACCTCTTATATGTTTCAGACACTCTCTGCCCAGACTCATTTTTAACTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310546.3
ENST00000508126.1
CDS TCA 72 bp GCTCTCTCCGCACGGCCAGGGGCGCGTCCTCACGGCTaGTGCCCGGCAGCAGCGCCCCCTCTGCGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ALSARPGARPHG*CPAAAPPLRCR
Trigger: CCTGCAGCGCAGAGGGGGCGCTGCTGCCGGGCATCAGCCGTGAGGACGCGCCCCTGGCCGTGCGGAGAGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS GCA 72 bp CGCCGCCCACTCAGGGGCGCCCGAGTGACCCGCAAATaGCGGCTCTCTCCGCACGGCCAGGGGCGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: RRPLRGARVTRK*RLSPHGQGRVL
Trigger: GAGGACGCGCCCCTGGCCGTGCGGAGAGAGCCGGCATTTGCGGGTCACTCGGGCGCCCCTGAGTGGGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS GCA 72 bp CCGCGCTGCCGAGCCGGCCAGTTGATCTGCCAGGCGTaGAGGCCGCGGGCGTGGCCCACCTTGCCGCGGATG +
Preference number: 6 (lower is better)
Translates to: PRCRAGQLICQA*RPRAWPTLPRM
Trigger: CATCCGCGGCAAGGTGGGCCACGCCCGCGGCCTGCACGCCTGGCAGATCAACTGGCCGGCTCGGCAGCGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GCGTGGCCCACCTTGCCGCGGATGCCGTCGGTGCTCTaGGCCACGGGGTGCCGGTGGAAGGTGAGCCGGTCG +
Preference number: 6 (lower is better)
Translates to: AWPTLPRMPSVL*ATGCRWKVSRS
Trigger: CGACCGGCTCACCTTCCACCGGCACCCCGTGGCCCAGAGCACCGACGGCATCCGCGGCAAGGTGGGCCACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS TCA 72 bp AAGGCCCGCGCTCTAGCCGCTTGGAAGCTTGGCGCCTaGCCCGGAGGGCGACGAGTCCCGCGCTCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: KARALAAWKLGA*PGGRRVPRSGR
Trigger: GCGCCCTGAGCGCGGGACTCGTCGCCCTCCGGGTCAGGCGCCAAGCTTCCAAGCGGCTAGAGCGCGGGCCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GCGCTCCAAGGCCCGCGCTCTAGCCGCTTGGAAGCTTaGCGCCTGACCCGGAGGGCGACGAGTCCCGCGCTC +
Preference number: 6 (lower is better)
Translates to: ALQGPRSSRLEA*RLTRRATSPAL
Trigger: GAGCGCGGGACTCGTCGCCCTCCGGGTCAGGCGCCAAGCTTCCAAGCGGCTAGAGCGCGGGCCTTGGAGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GCGGGGAGGAGGCCGCTGCAGGCCACCGCTACCTCGTaGGAGCCTCCACTCCCCGTAGCCAGGAATGGGCCA +
Preference number: 6 (lower is better)
Translates to: AGRRPLQATATS*EPPLPVARNGP
Trigger: TGGCCCATTCCTGGCTACGGGGAGTGGAGGCTCCCACGAGGTAGCGGTGGCCTGCAGCGGCCTCCTCCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 90 bp ACTGAAGCGATCCTGGGGGCGCTCCAAGGCCCGCGCTCTAGCCGCTaGGAAGCTTGGCGCCTGACCCGGAGGGCGACGAGTCCCGCGCTC +
Preference number: 6 (lower is better)
Translates to: TEAILGALQGPRSSR*EAWRLTRRATSPAL
Trigger: GAGCGCGGGACTCGTCGCCCTCCGGGTCAGGCGCCAAGCTTCCAAGCGGCTAGAGCGCGGGCCTTGGAGCGCCCCCAGGATCGCTTCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS GCA 72 bp AAGACGTTGAGCGAGCGGTCCTCGGGGTTCCACGCGTaGCGCAGCTGCACAGCCAGCCCCGCCGCTGGCATG +
Preference number: 6 (lower is better)
Translates to: KTLSERSSGFHA*RSCTASPAAGM
Trigger: CATGCCAGCGGCGGGGCTGGCTGTGCAGCTGCGGCACGCGTGGAACCCCGAGGACCGCTCGCTCAACGTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp AAGTTGGCGCTCAGGCGCCGGGGGTCGGGCCTGGAGTaGGGAAGCGCCTTACTGAAGCGATCCTGGGGGCGC +
Preference number: 6 (lower is better)
Translates to: KLALRRRGSGLE*GSALLKRSWGR
Trigger: GCGCCCCCAGGATCGCTTCAGTAAGGCGCTTCCCCACTCCAGGCCCGACCCCCGGCGCCTGAGCGCCAACTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GGAAGAATCCCCAGCGCTGGCAGGTCCTGGACTCCCTaGAGAGGGGTCTGCTGCCGCCGCCGCCCACTCAGG +
Preference number: 6 (lower is better)
Translates to: GRIPSAGRSWTP*RGVCCRRRPLR
Trigger: CCTGAGTGGGCGGCGGCGGCAGCAGACCCCTCTCCAGGGAGTCCAGGACCTGCCAGCGCTGGGGATTCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 72 bp ATCCTGGGGGCGCTCCAAGGCCCGCGCTCTAGCCGCTaGGAAGCTTGGCGCCTGACCCGGAGGGCGACGAGT +
Preference number: 6 (lower is better)
Translates to: ILGALQGPRSSR*EAWRLTRRATS
Trigger: ACTCGTCGCCCTCCGGGTCAGGCGCCAAGCTTCCAAGCGGCTAGAGCGCGGGCCTTGGAGCGCCCCCAGGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 90 bp AGCGCCCCCTCTGCGCTGCAGGATGGCCTGGAGTTAGGAGCGTTCTaGGCGAAGTTGGCGCTCAGGCGCCGGGGGTCGGGCCTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: SAPSALQDGLELGAF*AKLALRRRGSGLEW
Trigger: CCACTCCAGGCCCGACCCCCGGCGCCTGAGCGCCAACTTCGCCAAGAACGCTCCTAACTCCAGGCCATCCTGCAGCGCAGAGGGGGCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 90 bp TCCCGCTTGGCCGGCCGCAGCGCCGGCTCTCGCACCTCCACTGACTaGAGGCTCCCCGAGAGCTTCTGGCCCATGCTTCACTGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: SRLAGRSAGSRTSTD*RLPESFWPMLHCGE
Trigger: CTCCCCGCAGTGAAGCATGGGCCAGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCGAGAGCCGGCGCTGCGGCCGGCCAAGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 90 bp TCTGCGCTGCAGGATGGCCTGGAGTTAGGAGCGTTCTTGGCGAAGTaGGCGCTCAGGCGCCGGGGGTCGGGCCTGGAGTGGGGAAGCGCC +
Preference number: 6 (lower is better)
Translates to: SALQDGLELGAFLAK*ALRRRGSGLEWGSA
Trigger: GGCGCTTCCCCACTCCAGGCCCGACCCCCGGCGCCTGAGCGCCAACTTCGCCAAGAACGCTCCTAACTCCAGGCCATCCTGCAGCGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GGCCTGGAGTGGGGAAGCGCCTTACTGAAGCGATCCTaGGGGCGCTCCAAGGCCCGCGCTCTAGCCGCTTGG +
Preference number: 6 (lower is better)
Translates to: GLEWGSALLKRS*GRSKARALAAW
Trigger: CCAAGCGGCTAGAGCGCGGGCCTTGGAGCGCCCCCAGGATCGCTTCAGTAAGGCGCTTCCCCACTCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 72 bp GCCGGCCGCAGCGCCGGCTCTCGCACCTCCACTGACTaGAGGCTCCCCGAGAGCTTCTGGCCCATGCTTCAC +
Preference number: 6 (lower is better)
Translates to: AGRSAGSRTSTD*RLPESFWPMLH
Trigger: GTGAAGCATGGGCCAGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCGAGAGCCGGCGCTGCGGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 90 bp GGGTGCCGGTGGAAGGTGAGCCGGTCGTCGTCCTTGACGAAGACGTaGAGCGAGCGGTCCTCGGGGTTCCACGCGTGCCGCAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: GCRWKVSRSSSLTKT*SERSSGFHACRSCT
Trigger: TGTGCAGCTGCGGCACGCGTGGAACCCCGAGGACCGCTCGCTCAACGTCTTCGTCAAGGACGACGACCGGCTCACCTTCCACCGGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS TCA 72 bp CCGGCCGCAGCGCCGGCTCTCGCACCTCCACTGACTTaGGGCTCCCCGAGAGCTTCTGGCCCATGCTTCACT +
Preference number: 6 (lower is better)
Translates to: PAAAPALAPPLT*GSPRASGPCFT
Trigger: AGTGAAGCATGGGCCAGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCGAGAGCCGGCGCTGCGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp CCTCCACTCCCCGTAGCCAGGAATGGGCCACGGGGCTaGGAACCAGGCTTCCGGACGGTAGACCTCCACAGC +
Preference number: 6 (lower is better)
Translates to: PPLPVARNGPRG*EPGFRTVDLHS
Trigger: GCTGTGGAGGTCTACCGTCCGGAAGCCTGGTTCCCAGCCCCGTGGCCCATTCCTGGCTACGGGGAGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CAA 72 bp TCTGCGCTGCAGGATGGCCTGGAGTTAGGAGCGTTCTaGGCGAAGTTGGCGCTCAGGCGCCGGGGGTCGGGC +
Preference number: 6 (lower is better)
Translates to: SALQDGLELGAF*AKLALRRRGSG
Trigger: GCCCGACCCCCGGCGCCTGAGCGCCAACTTCGCCAAGAACGCTCCTAACTCCAGGCCATCCTGCAGCGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GATGCCCGGCAGCAGCGCCCCCTCTGCGCTGCAGGATaGCCTGGAGTTAGGAGCGTTCTTGGCGAAGTTGGC +
Preference number: 6 (lower is better)
Translates to: DARQQRPLCAAG*PGVRSVLGEVG
Trigger: GCCAACTTCGCCAAGAACGCTCCTAACTCCAGGCCATCCTGCAGCGCAGAGGGGGCGCTGCTGCCGGGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp CGCACCTCCACTGACTTGAGGCTCCCCGAGAGCTTCTaGCCCATGCTTCACTGCGGGGAGGAGGCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: RTSTDLRLPESF*PMLHCGEEAAA
Trigger: TGCAGCGGCCTCCTCCCCGCAGTGAAGCATGGGCCAGAAGCTCTCGGGGAGCCTCAAGTCAGTGGAGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GGCCGAGCGGATGGATCTCCGGCACAGGTCCATCAGTaGCAGGGGCTCGGGGTCAAGGCCGTTGATGTAGCG +
Preference number: 6 (lower is better)
Translates to: GRADGSPAQVHQ*QGLGVKAVDVA
Trigger: CGCTACATCAACGGCCTTGACCCCGAGCCCCTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GGCCGAGCGGATGGATCTCCGGCACAGGTCCATCAGTaGCAGGGGCTCGGCTGTAGTCCCAGCTACTCGGGA +
Preference number: 6 (lower is better)
Translates to: GRADGSPAQVHQ*QGLGCSPSYSG
Trigger: TCCCGAGTAGCTGGGACTACAGCCGAGCCCCTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS CAA 72 bp ACGGGGTGCCGGTGGAAGGTGAGCCGGTCGTCGTCCTaGACGAAGACGTTGAGCGAGCGGTCCTCGGGGTTC +
Preference number: 6 (lower is better)
Translates to: TGCRWKVSRSSS*TKTLSERSSGF
Trigger: GAACCCCGAGGACCGCTCGCTCAACGTCTTCGTCAAGGACGACGACCGGCTCACCTTCCACCGGCACCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS GCA 72 bp CTTCCGGACGGTAGACCTCCACAGCCTCTACCGGGCTaGGGCAGGGGCCCAAGCTCCATAAAAGAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LPDGRPPQPLPG*GRGPSSIKERA
Trigger: TGCCCTCTCTTTTATGGAGCTTGGGCCCCTGCCGCAGCCCGGTAGAGGCTGTGGAGGTCTACCGTCCGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310546.3
CDS CCA 72 bp GGCCGAGCGGATGGATCTCCGGCACAGGTCCATCAGTaGCAGGGGCTCGGCAAAGCTCACGCTGAGTTCACT +
Preference number: 6 (lower is better)
Translates to: GRADGSPAQVHQ*QGLGKAHAEFT
Trigger: AGTGAACTCAGCGTGAGCTTTGCCGAGCCCCTGCCACTGATGGACCTGTGCCGGAGATCCATCCGCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507895.1
CDS GCA 72 bp GCAGCCGCTGAGAAGGATGAAGAACCGGGGAGAGCCTaGACGGCAGTATTTTCCAAGCTCACGCTGTCTCGG +
Preference number: 6 (lower is better)
Translates to: AAAEKDEEPGRA*TAVFSKLTLSR
Trigger: CCGAGACAGCGTGAGCTTGGAAAATACTGCCGTGCAGGCTCTCCCCGGTTCTTCATCCTTCTCAGCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508828.1
CDS TCA 72 bp AGATCGTGCCACTGCACTTTGGCCAGGGCAACCGAGTaGGACTCCATGGTCAAGGCCGTTGATGTAGCGCAT +
Preference number: 6 (lower is better)
Translates to: RSCHCTLARATE*DSMVKAVDVAH
Trigger: ATGCGCTACATCAACGGCCTTGACCATGGAGTCTCACTCGGTTGCCCTGGCCAAAGTGCAGTGGCACGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508126.1
CDS CCA 72 bp ACGCTGAGTTCACTGCTTTACAGAGGCCCCTTTTCTTaGCTGGACTGCCAGATGGTTCTTAGTAGACCCAGG +
Preference number: 6 (lower is better)
Translates to: TLSSLLYRGPFS*LDCQMVLSRPR
Trigger: CCTGGGTCTACTAAGAACCATCTGGCAGTCCAGCCAAGAAAAGGGGCCTCTGTAAAGCAGTGAACTCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507895.1
CDS GCA 72 bp TCACTGCTTTACAGAGGCCCCTTTTCTTGGCTGGACTaGCAGATGGTTCTTAGTAGACCCAGGGAACTCTAT +
Preference number: 6 (lower is better)
Translates to: SLLYRGPFSWLD*QMVLSRPRELY
Trigger: ATAGAGTTCCCTGGGTCTACTAAGAACCATCTGGCAGTCCAGCCAAGAAAAGGGGCCTCTGTAAAGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507895.1
CDS TCA 72 bp GACGAAGAAGGGCCATTAAGCGGCACAGCCTTTGCTTaGATTATGGAATGCCTCAGACAAGCAGCCTTATTA +
Preference number: 6 (lower is better)
Translates to: DEEGPLSGTAFA*IMECLRQAALL
Trigger: TAATAAGGCTGCTTGTCTGAGGCATTCCATAATTCAAGCAAAGGCTGTGCCGCTTAATGGCCCTTCTTCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508828.1
CDS CAA 90 bp AAGCCTGGAATTCAGTTTTCCTGGGACCTCCTCATGAATTGCATTTaGAGGGAGAAACATCAACAAAGAGGACAAGATCTGGAAGTCAGC +
Preference number: 6 (lower is better)
Translates to: KPGIQFSWDLLMNCI*REKHQQRGQDLEVS
Trigger: GCTGACTTCCAGATCTTGTCCTCTTTGTTGATGTTTCTCCCTCAAAATGCAATTCATGAGGAGGTCCCAGGAAAACTGAATTCCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507895.1
CDS CAA 72 bp ATTCAGTTTTCCTGGGACCTCCTCATGAATTGCATTTaGAGGGAGAAACATCAACAAAGAGGACAAGATCTG +
Preference number: 6 (lower is better)
Translates to: IQFSWDLLMNCI*REKHQQRGQDL
Trigger: CAGATCTTGTCCTCTTTGTTGATGTTTCTCCCTCAAAATGCAATTCATGAGGAGGTCCCAGGAAAACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507895.1