RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPSB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171621

Ensembl transcript IDs: ENST00000328089.11, ENST00000357898.3, ENST00000377399.2, ENST00000450402.1

Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTaGGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAA +
Preference number: 1 (lower is better)
Translates to: GPRCRVRRPQRQAAQ*VGTRWLSRWRYDGE
Trigger: TTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTGCACCTTGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR GCA 90 bp ACGGAGGATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATaGCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCGGCAGGCGGC +
Preference number: 1 (lower is better)
Translates to: TEDEGRPGTSVHGYG*RSKVQGAAAPAAGG
Trigger: GCCGCCTGCCGCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCATCCTCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR TCA 90 bp AAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTaGTGTCGGGAAGGGGGAAAGAGGAGCCTGTGTTGGAATCGGTCC +
Preference number: 1 (lower is better)
Translates to: KRGCIRTACRDAAFC*CREGGKRSLCWNRS
Trigger: GGACCGATTCCAACACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR GCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGTCCAAGGTGCAGGGTaGGGCGGCCCCAGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRVQGAG*GGPSGR
Trigger: CCTGCCGCTGGGGCCGCCGCACCCTGCACCTTGGAC...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR TCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGCGGCAGGCGGCTCAGTaGGTTGGCACCAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGRQAAQ*VGTRWL
Trigger: CAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCG...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR CCA 90 bp GTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGGCGGCTCAGTGAGTTaGCACCAGGTGGCTGTCGCG +
Preference number: 2 (lower is better)
Translates to: VVYGRHAGMLPSADVGKGGGSVS*HQVAVA
Trigger: CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCC...CCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR CCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGGGCGGCTCAGTGAGTTaGCACCAGGTGGCTGTCGCG +
Preference number: 2 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGGGSVS*HQVAVA
Trigger: CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCC...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR GCA 90 bp TTTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGATGCCGGTCCAAGGTaGAGGGTGCGGCGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: FQRGVVYGRHAGMLPSADDAGPR*RVRRPQ
Trigger: CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATC...ATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR GCA 90 bp GTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGTCCATGGCTACGGATaGCGGTCCAAGGTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: VVYGRHAGMLPSADVGKGVHGYG*RSKVQG
Trigger: ACCCTGCACCTTGGACCGGCATCCGTAGCCATGGAC...CCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR GCA 90 bp AAAAGAATAAATACAGGGTACGGGGCACCGGCAGCCAGGATGGGTGCTGGGTGCGTCCATGGCTACGGATaGCGGTCCAAGGTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: KRINTGYGAPAARMGAGCVHGYG*RSKVQG
Trigger: ACCCTGCACCTTGGACCGGCATCCGTAGCCATGGAC...GCACCCAGCACCCATCCTGGCTGCCGGTGCCCCGTACCCTGTATTTATTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
3UTR-3UTR CCA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTAGGGACCTCTGTCCATaGCTACGGATGCCGGTCCAA +
Preference number: 2 (lower is better)
Translates to: HAGMLPSADVGKGERGACRDLCP*LRMPVQ
Trigger: TTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCT...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR GCA 90 bp AAAAGAATAAATACAGGGTACGGGGCACCGGCAGCCAGGATGGGTGCTGGGTGCTGTATACGGACGGCATaGAGGGATGCTGCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: KRINTGYGAPAARMGAGCCIRTA*RDAAFC
Trigger: GCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACA...GCACCCAGCACCCATCCTGGCTGCCGGTGCCCCGTACCCTGTATTTATTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
3UTR-3UTR CCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAGAGGAGCCTGTGTTaGAATCGGTCCTTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGKRSLC*NRSLSH
Trigger: ATGGGACAAGGACCGATTCCAACACAGGCTCCTCTT...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR GCA 72 bp GGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTaGAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAG +
Preference number: 3 (lower is better)
Translates to: GPLSMATDAGPR*RVRRPQRQAAQ
Trigger: CTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR GCA 72 bp GAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATaGCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCG +
Preference number: 3 (lower is better)
Translates to: EGRPGTSVHGYG*RSKVQGAAAPA
Trigger: CGCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR CAA 90 bp ATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGCGGCTCAGTGAGTaGGCACCAGGTGGCTGTCGC +
Preference number: 3 (lower is better)
Translates to: MREDQGPLSMATDAGPRCRRLSE*APGGCR
Trigger: GCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT...GCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR-3UTR CAA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAGGCGGCTCAGTGAGTaGGCACCAGGTGGCTGTCGC +
Preference number: 3 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGRRLSE*APGGCR
Trigger: GCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR CCA 72 bp CAAGCTCAAAGAAATGGCAAAGGCGGTGGCAGGTGCTaGGGTACGCTACGTGGAGGGGTTGCCAGGGATAGG +
Preference number: 3 (lower is better)
Translates to: QAQRNGKGGGRC*GTLRGGVARDR
Trigger: CCTATCCCTGGCAACCCCTCCACGTAGCGTACCCCAGCACCTGCCACCGCCTTTGCCATTTCTTTGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
3UTR GCA 72 bp CTTCAAGCTCAAAGAAATGGCAAAGGCGGTGGCAGGTaGTGGGGTACGCTACGTGGAGGGGTTGCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: LQAQRNGKGGGR*WGTLRGGVARD
Trigger: ATCCCTGGCAACCCCTCCACGTAGCGTACCCCAGCACCTGCCACCGCCTTTGCCATTTCTTTGAGCTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
3UTR GCA 72 bp AAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTaGCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: KEGLYTDGMQGC*LLLMSGRGKEE
Trigger: CTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
3UTR GCA 72 bp TTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATaGTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: FKEGLYTDGMQG*CLLLMSGRGKE
Trigger: CTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp CCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCCCCGGCTGGGGTGCTaGGCAGAGACCCGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLSMATDAGPRCRVRRPQPRLGC*AETRAG
Trigger: GCCAGCGCGGGTCTCTGCTCAGCACCCCAGCCGGGG...CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCCCGGCGCCTGGAGCCTaGTTCCTGCTGCGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSPAPGA*FLLRAR
Trigger: GCGCGCTCGCAGCAGGAACCAGGCTCCAGGCGCCGG...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGGCGGTGGCAGGTGCTaGGGTACGCTACGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVAGGGRC*GTLRGG
Trigger: CCCTCCACGTAGCGTACCCCAGCACCTGCCACCGCC...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
3UTR CAA 72 bp GGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTaGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATG +
Preference number: 4 (lower is better)
Translates to: GCGGPSGRRLSE*APGGCRAGGMM
Trigger: CATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTCTGGAGCCTGGTTCCTaGTGCGAGCGCGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGLEPGS*CERAGC
Trigger: GCAGCCTGCGCGCTCGCAGCAGGAACCAGGCTCCAG...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCGGCAGCGGCAGCGTGTaGATCTCCCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSGSGSV*ISPRRS
Trigger: GGAGCGCCTGGGGGAGATCCACACGCTGCCGCTGCC...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCTCATGGCCCACGTaGTCTGCCACACGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVAVSWPT*SATRAA
Trigger: GGCTGCACGTGTGGCAGATCACGTGGGCCATGAGAC...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCCGGCAGGCGGCTCAGTaGGTTGGCACCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DLCPWLRMPVQGAGCGGPRQAAQ*VGTRWL
Trigger: CAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCG...GGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp GCCAGGGATAGGGCACCCCTCTCTTCCGGCAGCCGAGCTACCCCTCTTGAGGCTATGGCATGGCCCCGCTaGGCACCCTGGGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ARDRAPLSSGSRATPLEAMAWPR*APWAGH
Trigger: GTGCCCGGCCCAGGGTGCCCAGCGGGGCCATGCCAT...AGCCTCAAGAGGGGTAGCTCGGCTGCCGGAAGAGAGGGGTGCCCTATCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTGTCTCATGGCCCACGTaGTCTGCCACACGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGVSWPT*SATRAA
Trigger: GGCTGCACGTGTGGCAGATCACGTGGGCCATGAGAC...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGGGCATGCAGGGATGCTaGCTTCTGCTGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: AAAPAAGGSVSWHQVAVAGMQGC*LLLMSG
Trigger: TCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCC...CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCGGCGGCTCAGTGAGTTaGCACCAGGTGGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSGGSVS*HQVAVA
Trigger: CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCC...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTTCAGGGGCCTGTACGTaGGGTCCCTCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGSGACT*GPSCPQ
Trigger: CTGTGGACATGAGGGACCCCACGTACAGGCCCCTGA...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp GCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGATTCGGATCTCACAGTaGCCCCAGACGGCACTCACT +
Preference number: 4 (lower is better)
Translates to: AAAPAAGGSVSWHQVAVAIRISQ*PQTALT
Trigger: AGTGAGTGCCGTCTGGGGCCACTGTGAGATCCGAAT...CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGGATGCCGGTGAAAGATaGGCTTGTCGTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AAAPAAGGSVSWHQVAVADAGER*ACRPPS
Trigger: TGAAGGAGGACGACAAGCTCATCTTTCACCGGCATC...CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp CCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGGCCACCGGATGCCGGTaGAAGATGAGCTTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PLSMATDAGPRCRVRRPQATGCR*KMSLSS
Trigger: GGACGACAAGCTCATCTTTCACCGGCATCCGGTGGC...CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGACTGTCCATCCACAATaGAGCTCAGAGTCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: AAAPAAGGSVSWHQVAVATVHPQ*SSESRR
Trigger: ACGACGGGACTCTGAGCTTCATTGTGGATGGACAGT...CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCGTCGCGCTGGCGGTATaGTGGCGAACGTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: DLCPWLRMPVQGAGCGGPVALAV*WRTSLV
Trigger: TACCAGTGACGTTCGCCATCATACCGCCAGCGCGAC...GGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACCGGCAGGCGGCTCAGTaGGTTGGCACCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLSELAPGGCRAGGMMANRQAAQ*VGTRWL
Trigger: CAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCG...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGATTCCTAATGAGGGCTaGCAGGAGACCTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: AAAPAAGGSVSWHQVAVAIPNEG*QETSAS
Trigger: GCTTGCAGAGGTCTCCTGGCAGCCCTCATTAGGAAT...CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCCCAGCCGGGTGGGCTTaGAGTAATCCAGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSPAGWA*SNPDPG
Trigger: TCCAGGGTCTGGATTACTGCAAGCCCACCCGGCTGG...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTGGCATGCAGGGATGCTaGCTTCTGCTGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGGMQGC*LLLMSG
Trigger: TCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCC...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTGACGGCATGCAGGGATaGTGCCTTCTGCTGATGTCG +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGDGMQG*CLLLMS
Trigger: CGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTC...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGGTGCCTGGGCACGTGTaGACATGTGCCCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: DQGPLSMATDAGPRCRVRVPGHV*TCAQGG
Trigger: CCCTCCCTGGGCACATGTGCACACGTGCCCAGGCAC...CCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTCAGCCCCAGGACTCGTaGTTATTCCCCACGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGQPQDS*LFPTRV
Trigger: AACCCTCGTGGGGAATAACCACGAGTCCTGGGGCTG...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp CCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGAGGTGGCTGTCGCGCTaGCGGTATGATGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: PLSMATDAGPRCRVRRPQRWLSR*RYDGER
Trigger: ACGTTCGCCATCATACCGCCAGCGCGACAGCCACCT...CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCGATGCTGCCTTCTGCTaGTGTCGGGAAGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: DLCPWLRMPVQGAGCGGPDAAFC*CREGGK
Trigger: CTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATC...GGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTGTTGTCCAAGGTGCAGGGTaGGGCGGCCCCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGMLPSADVGKGERGACVVQGAG*GGPSGR
Trigger: CCTGCCGCTGGGGCCGCCGCACCCTGCACCTTGGAC...AACACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp ATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCGATGCCGGTCCAAGGTaGAGGGTGCGGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: MREDQGPLSMATDAGPRCDAGPR*RVRRPQ
Trigger: CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATC...GCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTTGTATACGGACGGCATaGAGGGATGCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGCIRTA*RDAAFC
Trigger: GCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACA...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp GACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAAATGGCAAAGGCGGTaGCAGGTGCTGGGGTACGCT +
Preference number: 4 (lower is better)
Translates to: DLCPWLRMPVQGAGCGGPKWQRR*QVLGYA
Trigger: AGCGTACCCCAGCACCTGCCACCGCCTTTGCCATTT...GGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTTCGTCTCCAGTATTCTaGTCGGGGCCAGACAGAATT +
Preference number: 4 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVASSPVF*SGPDRI
Trigger: AATTCTGTCTGGCCCCGATCAGAATACTGGAGACGA...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GCCAGGGATAGGGCACCCCTCTCTTCCGGCAGCCGAGCTACCCCTCTTGAGGCTGTCGCGCTGGCGGTATaGTGGCGAACGTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: ARDRAPLSSGSRATPLEAVALAV*WRTSLV
Trigger: TACCAGTGACGTTCGCCATCATACCGCCAGCGCGAC...AGCCTCAAGAGGGGTAGCTCGGCTGCCGGAAGAGAGGGGTGCCCTATCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTCCAGAGAGAGGGGACTaGAACAGGGTTTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVAPERGD*NRVSFL
Trigger: TAGAAAGGAAACCCTGTTTCAGTCCCCTCTCTCTGG...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp AGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGCCCAGCCCTGCTTCCTaGAGCTTCCAAGCTCATGCG +
Preference number: 4 (lower is better)
Translates to: RRLSELAPGGCRAGGMMAPSPAS*SFQAHA
Trigger: CGCATGAGCTTGGAAGCTTCAGGAAGCAGGGCTGGG...CGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS-3UTR GCA 90 bp GACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCCAGCCGGGTGGGCTTaGAGTAATCCAGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: DQGPLSMATDAGPRCRVRPAGWA*SNPDPG
Trigger: TCCAGGGTCTGGATTACTGCAAGCCCACCCGGCTGG...CCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp ATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCCCACCACGGCGTGTGTaGCCCGCTGTCTCATGGCCC +
Preference number: 4 (lower is better)
Translates to: MREDQGPLSMATDAGPRCPPRRV*PAVSWP
Trigger: GGGCCATGAGACAGCGGGGCACACACGCCGTGGTGG...GCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGATGCCGGTCCAAGGTaGAGGGTGCGGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRDAGPR*RVRRPQ
Trigger: CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATC...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGTGTATACGGACGGCATaGAGGGATGCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PLSMATDAGPRCRVRRPQCIRTA*RDAAFC
Trigger: GCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACA...CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp AGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGACACAGGGGAATTGCTaGAGCCCTTCCAGACGGGCC +
Preference number: 4 (lower is better)
Translates to: RRLSELAPGGCRAGGMMATQGNC*SPSRRA
Trigger: GGCCCGTCTGGAAGGGCTGCAGCAATTCCCCTGTGT...CGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR GCA 90 bp GACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAACCCTGTGCAAGGGTaGCTGAGCCCAAGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: DLCPWLRMPVQGAGCGGPNPVQG*LSPRVS
Trigger: GCTAACTCTTGGGCTCAGGCACCCTTGCACAGGGTT...GGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR GCA 90 bp AGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAAAGGCGGTGGCAGGTaGTGGGGTACGCTACGTGGA +
Preference number: 4 (lower is better)
Translates to: RRLSELAPGGCRAGGMMAKGGGR*WGTLRG
Trigger: TCCACGTAGCGTACCCCAGCACCTGCCACCGCCTTT...CGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGCAGCGGCAGCGTGTaGATCTCCCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRGSGSV*ISPRRS
Trigger: GGAGCGCCTGGGGGAGATCCACACGCTGCCGCTGCC...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTAAGAGGAGCCTGTGTTaGAATCGGTCCTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVAKRSLC*NRSLSH
Trigger: ATGGGACAAGGACCGATTCCAACACAGGCTCCTCTT...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp AGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGGGGGTTGGGATGAACTaGGGCTGTTACCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RRLSELAPGGCRAGGMMAGVGMN*GCYPGS
Trigger: GGACCCAGGGTAACAGCCCCAGTTCATCCCAACCCC...CGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR GCA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACAGACCCTGGAGCTCCTaGTTCAGGGGCCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: RLSELAPGGCRAGGMMANRPWSS*FRGLYV
Trigger: CACGTACAGGCCCCTGAAGCAGGAGCTCCAGGGTCT...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp ACGGAGGATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCATGGCCCACGTGATCTaGCACACGTGCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: TEDEGRPGTSVHGYGCRSMAHVI*HTCSPR
Trigger: CCGTGGGCTGCACGTGTGGCAGATCACGTGGGCCAT...GGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCATCCTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTCCACCACGGCGTGTGTaGCCCGCTGTCTCATGGCCC +
Preference number: 4 (lower is better)
Translates to: HAGMLPSADVGKGERGACPPRRV*PAVSWP
Trigger: GGGCCATGAGACAGCGGGGCACACACGCCGTGGTGG...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGTACCCCTGGTATCTaGTCTCAGAGCTGTGGTACC +
Preference number: 4 (lower is better)
Translates to: DLCPWLRMPVQGAGCGGPSTPGI*SQSCGT
Trigger: GGTACCACAGCTCTGAGAGCAGATACCAGGGGTACT...GGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTTGGTTCCAGAAAGGCTaGGTATGTTTTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVAWFQKG*VCFAWL
Trigger: CAGCCAAGCAAAACATACCCAGCCTTTCTGGAACCA...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp AGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGCACCGGCAGCCAGGATaGGTGCTGGGTGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: RRLSELAPGGCRAGGMMAHRQPG*VLGAYL
Trigger: CAAATAAGCACCCAGCACCCATCCTGGCTGCCGGTG...CGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCGTCGTTGTTGTTCCATaGATGCAGCAGCTGGACATC +
Preference number: 4 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSVVVVP*MQQLDI
Trigger: GATGTCCAGCTGCTGCATTCATGGAACAACAACGAC...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACGATGCTGCCTTCTGCTaGTGTCGGGAAGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RLSELAPGGCRAGGMMANDAAFC*CREGGK
Trigger: CTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATC...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp AGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGACCCATGTTCGCCCCTaGCTTCACCTTCTTACCGAC +
Preference number: 4 (lower is better)
Translates to: RRLSELAPGGCRAGGMMATHVRP*LHLLTD
Trigger: GTCGGTAAGAAGGTGAAGCCAGGGGCGAACATGGGT...CGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp GACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGACCCATGTTCGCCCCTaGCTTCACCTTCTTACCGAC +
Preference number: 4 (lower is better)
Translates to: DQGPLSMATDAGPRCRVRTHVRP*LHLLTD
Trigger: GTCGGTAAGAAGGTGAAGCCAGGGGCGAACATGGGT...CCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACCAGCCCCAGGACTCGTaGTTATTCCCCACGAGGGTT +
Preference number: 4 (lower is better)
Translates to: RLSELAPGGCRAGGMMANQPQDS*LFPTRV
Trigger: AACCCTCGTGGGGAATAACCACGAGTCCTGGGGCTG...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTGGCGGCTCAGTGAGTTaGCACCAGGTGGCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: HAGMLPSADVGKGERGACGGSVS*HQVAVA
Trigger: CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCC...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCAAGAGGAGCCTGTGTTaGAATCGGTCCTTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSKRSLC*NRSLSH
Trigger: ATGGGACAAGGACCGATTCCAACACAGGCTCCTCTT...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp GTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGCCTGGAACTGCAGCCTaGAGGGTGCTTCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VVYGRHAGMLPSADVGKGPGTAA*RVLPQP
Trigger: GGGCTGGGGAAGCACCCTCCAGGCTGCAGTTCCAGG...CCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS-3UTR TCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGGACGGCACAAATCCATaGGCGGCAGCGGCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGDGTNP*AAAARD
Trigger: ATCCCGAGCCGCTGCCGCTCATGGATTTGTGCCGTC...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp ATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCGTGATCTGCCACACGTaGAGCCCACGGGTATACCCG +
Preference number: 4 (lower is better)
Translates to: MREDQGPLSMATDAGPRCVICHT*SPRVYP
Trigger: CGGGTATACCCGTGGGCTGCACGTGTGGCAGATCAC...GCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCCAGAGACATACTTGTaGCTGGGCACGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: DQGPLSMATDAGPRCRVRPETYL*LGTCAH
Trigger: ATGTGCACACGTGCCCAGGCACAAGTATGTCTCTGG...CCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR GCA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTAGAAGACTAAAGAAATaGAACCCTGTGCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGRRLKK*NPVQGC
Trigger: GCACCCTTGCACAGGGTTGCATTTCTTTAGTCTTCT...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR GCA 90 bp GACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGCAGTGTTCAGTATTaGCTTCCCTGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: DQGPLSMATDAGPRCRVRRSVQY*LPWNCS
Trigger: GCTGCAGTTCCAGGGAAGGCAATACTGAACACTGCG...CCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS-3UTR CCA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACCAGTATTGCCTTCCCTaGAACTGCAGCCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RLSELAPGGCRAGGMMANQYCLP*NCSLEG
Trigger: ACCCTCCAGGCTGCAGTTCCAGGGAAGGCAATACTG...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS-3UTR TCA 90 bp AGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGGTCGTTGTTGTTCCATaGATGCAGCAGCTGGACATC +
Preference number: 4 (lower is better)
Translates to: RRLSELAPGGCRAGGMMAVVVVP*MQQLDI
Trigger: GATGTCCAGCTGCTGCATTCATGGAACAACAACGAC...CGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGCCACCGGATGCCGGTaGAAGATGAGCTTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRATGCR*KMSLSS
Trigger: GGACGACAAGCTCATCTTTCACCGGCATCCGGTGGC...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTAGACCCTGGAGCTCCTaGTTCAGGGGCCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: HAGMLPSADVGKGERGACRPWSS*FRGLYV
Trigger: CACGTACAGGCCCCTGAAGCAGGAGCTCCAGGGTCT...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGTGATCTGCCACACGTaGAGCCCACGGGTATACCCG +
Preference number: 4 (lower is better)
Translates to: VVYGRHAGMLPSADVGKGVICHT*SPRVYP
Trigger: CGGGTATACCCGTGGGCTGCACGTGTGGCAGATCAC...CCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGTCCATGGCTACGGATaGCGGTCCAAGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRVHGYG*RSKVQG
Trigger: ACCCTGCACCTTGGACCGGCATCCGTAGCCATGGAC...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGGTCCATGGCTACGGATaGCGGTCCAAGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGVHGYG*RSKVQG
Trigger: ACCCTGCACCTTGGACCGGCATCCGTAGCCATGGAC...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp ATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCGCAGATCCAGCCGGGTaGGCTTGCAGTAATCCAGAC +
Preference number: 4 (lower is better)
Translates to: MREDQGPLSMATDAGPRCADPAG*ACSNPD
Trigger: GTCTGGATTACTGCAAGCCCACCCGGCTGGATCTGC...GCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp ACGGAGGATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCATTCGGATCTCACAGTaGCCCCAGACGGCACTCACT +
Preference number: 4 (lower is better)
Translates to: TEDEGRPGTSVHGYGCRSIRISQ*PQTALT
Trigger: AGTGAGTGCCGTCTGGGGCCACTGTGAGATCCGAAT...GGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCATCCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp GACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGTCAAGCTCAAAGAAATaGCAAAGGCGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DQGPLSMATDAGPRCRVRSSSKK*QRRWQV
Trigger: CACCTGCCACCGCCTTTGCCATTTCTTTGAGCTTGA...CCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp GCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTGTTCTGTGCAAGGGTGCCTaGGCCCAAGAGTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGMLPSADVGKGERGACVLCKGA*AQELAG
Trigger: ACCAGCTAACTCTTGGGCTCAGGCACCCTTGCACAG...AACACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR GCA 90 bp ACGGAGGATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCGAGACCTCTGCAAGCTaGGCAGTGTTCAGTATTGCC +
Preference number: 4 (lower is better)
Translates to: TEDEGRPGTSVHGYGCRSETSAS*AVFSIA
Trigger: GGCAATACTGAACACTGCGCAGCTTGCAGAGGTCTC...GGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCATCCTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGCTGCCAGGAGACCTCTaGAAGCTGCGCAGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRLPGDL*KLRSVQ
Trigger: CTGAACACTGCGCAGCTTGCAGAGGTCTCCTGGCAG...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGACGGCATGCAGGGATaGTGCCTTCTGCTGATGTCG +
Preference number: 4 (lower is better)
Translates to: VVYGRHAGMLPSADVGKGDGMQG*CLLLMS
Trigger: CGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTC...CCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGTGTGAGGCTCGACTCTaGTCCTGGTCTTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRCEARL*SWSSPS
Trigger: GGATGGGGAAGACCAGGAGCAGAGTCGAGCCTCACA...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCAACTCATCAATCTCGTaGTCTCGTCTCCAGTATTCT +
Preference number: 4 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSNSSIS*SRLQYS
Trigger: AGAATACTGGAGACGAGACCACGAGATTGATGAGTT...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp AAAAGAATAAATACAGGGTACGGGGCACCGGCAGCCAGGATGGGTGCTGGGTGCAGGTGGCTGTCGCGCTaGCGGTATGATGGCGAACGT +
Preference number: 4 (lower is better)
Translates to: KRINTGYGAPAARMGAGCRWLSR*RYDGER
Trigger: ACGTTCGCCATCATACCGCCAGCGCGACAGCCACCT...GCACCCAGCACCCATCCTGGCTGCCGGTGCCCCGTACCCTGTATTTATTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp GCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTGTTAGGGACCTCTGTCCATaGCTACGGATGCCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: AGMLPSADVGKGERGACVRDLCP*LRMPVQ
Trigger: TTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCT...AACACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp ATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCATCTGTGAGGACGGCTaGGTCAAGGCCATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: MREDQGPLSMATDAGPRCICEDG*VKAISW
Trigger: CCAGCTTATGGCCTTGACCCAGCCGTCCTCACAGAT...GCACCTTGGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACCCTTCACAAAGACATTaGGCGATCGGTCGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RLSELAPGGCRAGGMMANPSQRH*AIGRCC
Trigger: ACAACAACGACCGATCGCTCAATGTCTTTGTGAAGG...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp TTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGGACGGCACAAATCCATaGGCGGCAGCGGCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: FKEGLYTDGMQGCCLLLMDGTNP*AAAARD
Trigger: ATCCCGAGCCGCTGCCGCTCATGGATTTGTGCCGTC...CATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp TTTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATCCTCCAGTGACCTTCTaGCCCATGTTCGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FQRGVVYGRHAGMLPSADPPVTF*PMFAPG
Trigger: GCCAGGGGCGAACATGGGTCAGAAGGTCACTGGAGG...ATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp GTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGACTGTCCATCCACAATaGAGCTCAGAGTCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: VVYGRHAGMLPSADVGKGTVHPQ*SSESRR
Trigger: ACGACGGGACTCTGAGCTTCATTGTGGATGGACAGT...CCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTATTCCTAATGAGGGCTaGCAGGAGACCTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: HAGMLPSADVGKGERGACIPNEG*QETSAS
Trigger: GCTTGCAGAGGTCTCCTGGCAGCCCTCATTAGGAAT...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp TTTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATATGGCCCACGTGATCTaGCACACGTGCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: FQRGVVYGRHAGMLPSADMAHVI*HTCSPR
Trigger: CCGTGGGCTGCACGTGTGGCAGATCACGTGGGCCAT...ATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAGGATGGGTGCTGGGTaGTTATTTGCCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGRMGAG*LFACRQ
Trigger: CTGTCTGCAGGCAAATAAGCACCCAGCACCCATCCT...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGAGCCCAAGAGTTAGCTaGTTACCTGGAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRSPRVS*LPGDTG
Trigger: CCCTGTGTCTCCAGGTAACCAGCTAACTCTTGGGCT...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGTCGTCTCCAGTATTCTaGTCGGGGCCAGACAGAATT +
Preference number: 4 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGSSPVF*SGPDRI
Trigger: AATTCTGTCTGGCCCCGATCAGAATACTGGAGACGA...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGACAGTTCTTGGTTTCTaGCTTGGGGTCCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGTVLGF*LGVHGE
Trigger: CTCACCATGGACCCCAAGGCAGAAACCAAGAACTGT...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CCA 90 bp TTTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATTCAGGGGCCTGTACGTaGGGTCCCTCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: FQRGVVYGRHAGMLPSADSGACT*GPSCPQ
Trigger: CTGTGGACATGAGGGACCCCACGTACAGGCCCCTGA...ATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp AACTTCAAGCTCAAAGAAATGGCAAAGGCGGTGGCAGGTGCTGGGGTACGCTACGCAGATCCAGCCGGGTaGGCTTGCAGTAATCCAGAC +
Preference number: 4 (lower is better)
Translates to: NFKLKEMAKAVAGAGVRYADPAG*ACSNPD
Trigger: GTCTGGATTACTGCAAGCCCACCCGGCTGGATCTGC...GTAGCGTACCCCAGCACCTGCCACCGCCTTTGCCATTTCTTTGAGCTTGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAGGAGTCAGGGACAATaGATGTCTCATCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGRSQGQ*MSHLVP
Trigger: TGGAACCAGATGAGACATTCATTGTCCCTGACTCCT...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR TCA 90 bp TTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGCACCAAGATCCACCCTaGGCTTCTCCAAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FKEGLYTDGMQGCCLLLMHQDPP*ASPSFC
Trigger: GCAGAAGCTTGGAGAAGCTCAGGGTGGATCTTGGTG...CATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS-3UTR CCA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTTGGGTATGTTTTGCTTaGCTGGTTCTTGCCATCGTG +
Preference number: 4 (lower is better)
Translates to: HAGMLPSADVGKGERGACWVCFA*LVLAIV
Trigger: CACGATGGCAAGAACCAGCCAAGCAAAACATACCCA...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp GCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTGTTTGGGTATGTTTTGCTTaGCTGGTTCTTGCCATCGTG +
Preference number: 4 (lower is better)
Translates to: AGMLPSADVGKGERGACVWVCFA*LVLAIV
Trigger: CACGATGGCAAGAACCAGCCAAGCAAAACATACCCA...AACACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGTGGTTCCAGAAAGGCTaGGTATGTTTTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGWFQKG*VCFAWL
Trigger: CAGCCAAGCAAAACATACCCAGCCTTTCTGGAACCA...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR GCA 90 bp GCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTGTTGGGTGCTTATTTGCCTaGAGACAGTTCTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: AGMLPSADVGKGERGACVGCLFA*RQFLVS
Trigger: AGAAACCAAGAACTGTCTGCAGGCAAATAAGCACCC...AACACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR GCA 90 bp AAAAGAATAAATACAGGGTACGGGGCACCGGCAGCCAGGATGGGTGCTGGGTGCTGCTGGGTGCTTATTTaGCTGCAGACAGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: KRINTGYGAPAARMGAGCCWVLI*LQTVLG
Trigger: ACCAAGAACTGTCTGCAGGCAAATAAGCACCCAGCA...GCACCCAGCACCCATCCTGGCTGCCGGTGCCCCGTACCCTGTATTTATTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR TCA 90 bp TTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGCCTTCACAAAGACATTaGGCGATCGGTCGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FKEGLYTDGMQGCCLLLMPSQRH*AIGRCC
Trigger: ACAACAACGACCGATCGCTCAATGTCTTTGTGAAGG...CATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CCA 90 bp TTTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATAACTCATCAATCTCGTaGTCTCGTCTCCAGTATTCT +
Preference number: 4 (lower is better)
Translates to: FQRGVVYGRHAGMLPSADNSSIS*SRLQYS
Trigger: AGAATACTGGAGACGAGACCACGAGATTGATGAGTT...ATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTAGGCGGCTCAGTGAGTaGGCACCAGGTGGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVARRLSE*APGGCR
Trigger: GCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCAGGCGGCTCAGTGAGTaGGCACCAGGTGGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSRRLSE*APGGCR
Trigger: GCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCT...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCGGCCCGCTAGGGAACTaGGAGCAGAGCCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSGPLGN*EQSPLE
Trigger: TTCCAGGGGGCTCTGCTCCAAGTTCCCTAGCGGGCC...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CAA 90 bp GCCAGGGATAGGGCACCCCTCTCTTCCGGCAGCCGAGCTACCCCTCTTGAGGCTCGCTACGTGGAGGGGTaGCCAGGGATAGGGCACCCC +
Preference number: 5 (lower is better)
Translates to: ARDRAPLSSGSRATPLEARYVEG*PGIGHP
Trigger: GGGGTGCCCTATCCCTGGCAACCCCTCCACGTAGCG...AGCCTCAAGAGGGGTAGCTCGGCTGCCGGAAGAGAGGGGTGCCCTATCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS GCA 90 bp CCAGACAGAATTCCTAATGAGGGCTGCCAGGAGACCTCTGCAAGCTaGGCAGTGTTCAGTATTGCCGCGCCCGGGGTGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PDRIPNEGCQETSAS*AVFSIAAPGVPPPP
Trigger: CGGCGGCGGCGGCACCCCGGGCGCGGCAATACTGAACACTGCGCAGCTTGCAGAGGTCTCCTGGCAGCCCTCATTAGGAATTCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CAA 90 bp GCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGTTGAGCGATCGGTCGTaGTTGTTCCATGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: AAAPAAGGSVSWHQVAVALSDRS*LFHECS
Trigger: GCTGCATTCATGGAACAACAACGACCGATCGCTCAA...CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp GCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGAAGGCTGGGTATGTTTaGCTTGGCTGGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: AAAPAAGGSVSWHQVAVAKAGYV*LGWFLP
Trigger: TGGCAAGAACCAGCCAAGCAAAACATACCCAGCCTT...CGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGGACCCAGAGACATACTaGTGCCTGGGCACGTGTGCA +
Preference number: 5 (lower is better)
Translates to: PLSMATDAGPRCRVRRPQDPETY*CLGTCA
Trigger: TGCACACGTGCCCAGGCACAAGTATGTCTCTGGGTC...CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS GCA 90 bp GCGTGTGTGCCCCGCTGTCTCATGGCCCACGTGATCTGCCACACGTaGAGCCCACGGGTATACCCGACTTTGCCCCTGATAGCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: ACVPRCLMAHVICHT*SPRVYPTLPLIASV
Trigger: CACGGACGCTATCAGGGGCAAAGTCGGGTATACCCGTGGGCTGCACGTGTGGCAGATCACGTGGGCCATGAGACAGCGGGGCACACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS-3UTR CAA 90 bp CCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTAAAGAGGAGCCTGTGTaGGAATCGGTCCTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PSGRRLSELAPGGCRAGGKEEPV*ESVLVP
Trigger: TGGGACAAGGACCGATTCCAACACAGGCTCCTCTTT...ACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGGCGCAGTGTTCAGTATaGCCTTCCCTGGAACTGCAG +
Preference number: 5 (lower is better)
Translates to: PLSMATDAGPRCRVRRPQAQCSV*PSLELQ
Trigger: CTGCAGTTCCAGGGAAGGCAATACTGAACACTGCGC...CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS TCA 90 bp GGCGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATaGTGGCGAACGTCACTGGTAGAGGAGGTAGGCCTTGAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: GGSVSWHQVAVALAV*WRTSLVEEVGLEGS
Trigger: GCTTCCCTCAAGGCCTACCTCCTCTACCAGTGACGTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTTGGCACCAGGTGGCTTCCTTCACAAAGACATaGAGCGATCGGTCGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QGAAAPAAGGSVSWHQVASFTKT*SDRSLL
Trigger: CAACAACGACCGATCGCTCAATGTCTTTGTGAAGGA...AGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS GCA 90 bp AGGACACAGGGGGCATGTCCAGTAGCAGATCCAGCCGGGTGGGCTTaGAGTAATCCAGACCCTGGAGCTCCTGCTTCAGGGGCCTGTACG +
Preference number: 5 (lower is better)
Translates to: RTQGACPVADPAGWA*SNPDPGAPASGACT
Trigger: CGTACAGGCCCCTGAAGCAGGAGCTCCAGGGTCTGGATTACTGCAAGCCCACCCGGCTGGATCTGCTACTGGACATGCCCCCTGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS-3UTR CAA 90 bp CCTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGAAGGCTGGGTATGTTTaGCTTGGCTGGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: PLSMATDAGPRCRVRRPQKAGYV*LGWFLP
Trigger: TGGCAAGAACCAGCCAAGCAAAACATACCCAGCCTT...CTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS GCA 90 bp ATTGCCTTCCCTGGAACTGCAGCCTGGAGGGTGCTTCCCCAGCCCTaGTTCCTGAAGCTTCCAAGCTCATGCGCCGAGACAGTAGCTCCG +
Preference number: 5 (lower is better)
Translates to: IAFPGTAAWRVLPQP*FLKLPSSCAETVAP
Trigger: CGGAGCTACTGTCTCGGCGCATGAGCTTGGAAGCTTCAGGAAGCAGGGCTGGGGAAGCACCCTCCAGGCTGCAGTTCCAGGGAAGGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS CCA 90 bp CATCATAGGACACAGGGGGCATGTCCAGTAGCAGATCCAGCCGGGTaGGCTTGCAGTAATCCAGACCCTGGAGCTCCTGCTTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: HHRTQGACPVADPAG*ACSNPDPGAPASGA
Trigger: GGCCCCTGAAGCAGGAGCTCCAGGGTCTGGATTACTGCAAGCCCACCCGGCTGGATCTGCTACTGGACATGCCCCCTGTGTCCTATGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS-3UTR CAA 90 bp GCCAGGGATAGGGCACCCCTCTCTTCCGGCAGCCGAGCTACCCCTCTTGAGGCTCTCATGTCCACAGTCTaGATCCCTCCAGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: ARDRAPLSSGSRATPLEALMSTV*IPPVTF
Trigger: GAAGGTCACTGGAGGGATCAAGACTGTGGACATGAG...AGCCTCAAGAGGGGTAGCTCGGCTGCCGGAAGAGAGGGGTGCCCTATCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CAA 90 bp ACGGAGGATGAGGGAAGACCAGGGACCTCTGTCCATGGCTACGGATGCCGGTCCTGTTGGAATCGGTCCTaGTCCCATGGAGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: TEDEGRPGTSVHGYGCRSCWNRS*SHGGSH
Trigger: GTGGCTGCCTCCATGGGACAAGGACCGATTCCAACA...GGACCGGCATCCGTAGCCATGGACAGAGGTCCCTGGTCTTCCCTCATCCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CTCTGTCCATGGCTACGGATGCCGGTCCAAGGTGCAGGGTGCGGCGGCCCCAGCTTTTTCAAAGAGGGGTaGTATACGGACGGCATGCAG +
Preference number: 5 (lower is better)
Translates to: LCPWLRMPVQGAGCGGPSFFKEG*YTDGMQ
Trigger: CTGCATGCCGTCCGTATACAACCCCTCTTTGAAAAA...GCTGGGGCCGCCGCACCCTGCACCTTGGACCGGCATCCGTAGCCATGGACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACCTCATGTCCACAGTCTaGATCCCTCCAGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: RLSELAPGGCRAGGMMANLMSTV*IPPVTF
Trigger: GAAGGTCACTGGAGGGATCAAGACTGTGGACATGAG...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp GCCAGGGATAGGGCACCCCTCTCTTCCGGCAGCCGAGCTACCCCTCTTGAGGCTCTGGGTATGTTTTGCTaGGCTGGTTCTTGCCATCGT +
Preference number: 5 (lower is better)
Translates to: ARDRAPLSSGSRATPLEALGMFC*AGSCHR
Trigger: ACGATGGCAAGAACCAGCCAAGCAAAACATACCCAG...AGCCTCAAGAGGGGTAGCTCGGCTGCCGGAAGAGAGGGGTGCCCTATCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CAA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACAAAGAGGAGCCTGTGTaGGAATCGGTCCTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: RLSELAPGGCRAGGMMANKEEPV*ESVLVP
Trigger: TGGGACAAGGACCGATTCCAACACAGGCTCCTCTTT...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CGGCTCAGTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACTTGAGCGATCGGTCGTaGTTGTTCCATGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: RLSELAPGGCRAGGMMANLSDRS*LFHECS
Trigger: GCTGCATTCATGGAACAACAACGACCGATCGCTCAA...GTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp AAAAGAATAAATACAGGGTACGGGGCACCGGCAGCCAGGATGGGTGCTGGGTGCCGGGTATACCCGACTTaGCCCCTGATAGCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: KRINTGYGAPAARMGAGCRVYPT*PLIASV
Trigger: CACGGACGCTATCAGGGGCAAAGTCGGGTATACCCG...GCACCCAGCACCCATCCTGGCTGCCGGTGCCCCGTACCCTGTATTTATTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS-3UTR CAA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGTGTTGGAATCGGTCCTaGTCCCATGGAGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRCWNRS*SHGGSH
Trigger: GTGGCTGCCTCCATGGGACAAGGACCGATTCCAACA...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp GCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTGTTCCCACCCCGAGCAGATaGGAGCTCAATGTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: AGMLPSADVGKGERGACVPTPSR*ELNVGL
Trigger: AAGCCCTACATTGAGCTCCAATCTGCTCGGGGTGGG...AACACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS TCA 90 bp GTGGGGTCCCTCATGTCCACAGTCTTGATCCCTCCAGTGACCTTCTaGCCCATGTTCGCCCCTGGCTTCACCTTCTTACCGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: VGSLMSTVLIPPVTF*PMFAPGFTFLPTPK
Trigger: CTTGGGAGTCGGTAAGAAGGTGAAGCCAGGGGCGAACATGGGTCAGAAGGTCACTGGAGGGATCAAGACTGTGGACATGAGGGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS-3UTR CAA 90 bp GGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGTATTCCCCACGAGGGTaGTGTACCCGACAGAGTGCA +
Preference number: 5 (lower is better)
Translates to: GLYTDGMQGCCLLLMSGRYSPRG*CTRQSA
Trigger: TGCACTCTGTCGGGTACACAACCCTCGTGGGGAATA...CCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp TTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGTATTCCCCACGAGGGTaGTGTACCCGACAGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LYTDGMQGCCLLLMSGRGYSPRG*CTRQSA
Trigger: TGCACTCTGTCGGGTACACAACCCTCGTGGGGAATA...CCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTAGCGATCGGTCGTTGTaGTTCCATGAATGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HAGMLPSADVGKGERGACSDRSL*FHECSS
Trigger: GCTGCTGCATTCATGGAACAACAACGACCGATCGCT...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS TCA 90 bp AAGCTCATGCGCCGAGACAGTAGCTCCGGCCACCAAGATCCACCCTaGGCTTCTCCAAGCTTCTGCTCGTTTGTCTGTCACACACTTACC +
Preference number: 5 (lower is better)
Translates to: KLMRRDSSSGHQDPP*ASPSFCSFVCHTLT
Trigger: GGTAAGTGTGTGACAGACAAACGAGCAGAAGCTTGGAGAAGCTCAGGGTGGATCTTGGTGGCCGGAGCTACTGTCTCGGCGCATGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS-3UTR CAA 90 bp TTTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATCGGGTATACCCGACTTaGCCCCTGATAGCGTCCGTG +
Preference number: 5 (lower is better)
Translates to: FQRGVVYGRHAGMLPSADRVYPT*PLIASV
Trigger: CACGGACGCTATCAGGGGCAAAGTCGGGTATACCCG...ATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp CATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGGAAAGAGGAGCCTGTCTGGGTATGTTTTGCTaGGCTGGTTCTTGCCATCGT +
Preference number: 5 (lower is better)
Translates to: HAGMLPSADVGKGERGACLGMFC*AGSCHR
Trigger: ACGATGGCAAGAACCAGCCAAGCAAAACATACCCAG...ACAGGCTCCTCTTTCCCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS-3UTR CAA 90 bp GTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATGTCGGGAAGGGGTTTTTCAAAGAGGGGTaGTATACGGACGGCATGCAG +
Preference number: 5 (lower is better)
Translates to: VVYGRHAGMLPSADVGKGFFKEG*YTDGMQ
Trigger: CTGCATGCCGTCCGTATACAACCCCTCTTTGAAAAA...CCCCTTCCCGACATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS TCA 90 bp TCCCAAGGCAAACTCATCAATCTCGTGGTCTCGTCTCCAGTATTCTaGTCGGGGCCAGACAGAATTCCTAATGAGGGCTGCCAGGAGACC +
Preference number: 5 (lower is better)
Translates to: SQGKLINLVVSSPVF*SGPDRIPNEGCQET
Trigger: GGTCTCCTGGCAGCCCTCATTAGGAATTCTGTCTGGCCCCGATCAGAATACTGGAGACGAGACCACGAGATTGATGAGTTTGCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS CCA 90 bp CACAGTCTTGATCCCTCCAGTGACCTTCTGACCCATGTTCGCCCCTaGCTTCACCTTCTTACCGACTCCCAAGGCAAACTCATCAATCTC +
Preference number: 5 (lower is better)
Translates to: HSLDPSSDLLTHVRP*LHLLTDSQGKLINL
Trigger: GAGATTGATGAGTTTGCCTTGGGAGTCGGTAAGAAGGTGAAGCCAGGGGCGAACATGGGTCAGAAGGTCACTGGAGGGATCAAGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS TCA 90 bp TCCCGTCGTCCATGTCCAGGGCTACCAGGAAGGAGTCAGGGACAATaGATGTCTCATCTGGTTCCAGAAAGGCTGGGTATGTTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SRRPCPGLPGRSQGQ*MSHLVPERLGMFCL
Trigger: CAAGCAAAACATACCCAGCCTTTCTGGAACCAGATGAGACATTCATTGTCCCTGACTCCTTCCTGGTAGCCCTGGACATGGACGACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS CCA 90 bp GTCCAGGGCTACCAGGAAGGAGTCAGGGACAATGAATGTCTCATCTaGTTCCAGAAAGGCTGGGTATGTTTTGCTTGGCTGGTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: VQGYQEGVRDNECLI*FQKGWVCFAWLVLA
Trigger: GGCAAGAACCAGCCAAGCAAAACATACCCAGCCTTTCTGGAACCAGATGAGACATTCATTGTCCCTGACTCCTTCCTGGTAGCCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS CCA 90 bp GGCTTCACCTTCTTACCGACTCCCAAGGCAAACTCATCAATCTCGTaGTCTCGTCTCCAGTATTCTGATCGGGGCCAGACAGAATTCCTA +
Preference number: 5 (lower is better)
Translates to: GFTFLPTPKANSSIS*SRLQYSDRGQTEFL
Trigger: TAGGAATTCTGTCTGGCCCCGATCAGAATACTGGAGACGAGACCACGAGATTGATGAGTTTGCCTTGGGAGTCGGTAAGAAGGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS-3UTR CAA 90 bp TTTCAAAGAGGGGTTGTATACGGACGGCATGCAGGGATGCTGCCTTCTGCTGATCAAGCTTCTGCTCGTTaGTCTGTCACACACTTACCT +
Preference number: 5 (lower is better)
Translates to: FQRGVVYGRHAGMLPSADQASAR*SVTHLP
Trigger: AGGTAAGTGTGTGACAGACAAACGAGCAGAAGCTTG...ATCAGCAGAAGGCAGCATCCCTGCATGCCGTCCGTATACAACCCCTCTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS CAA 90 bp ATGAGGGCTGCCAGGAGACCTCTGCAAGCTGCGCAGTGTTCAGTATaGCCGCGCCCGGGGTGCCGCCGCCGCCGCTGCTCTCCAAGGCCG +
Preference number: 6 (lower is better)
Translates to: MRAARRPLQAAQCSV*PRPGCRRRRCSPRP
Trigger: CGGCCTTGGAGAGCAGCGGCGGCGGCGGCACCCCGGGCGCGGCAATACTGAACACTGCGCAGCTTGCAGAGGTCTCCTGGCAGCCCTCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS CAA 90 bp CAAGGTGCAGGGTGCGGCGGCCCCAGCGGCAGGCGGCTCAGTGAGTaGGCACCAGGTGGCTGTCGCGCTGGCGGTATGATGGCGAACGTC +
Preference number: 6 (lower is better)
Translates to: QGAGCGGPSGRRLSE*APGGCRAGGMMANV
Trigger: GACGTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCACTGAGCCGCCTGCCGCTGGGGCCGCCGCACCCTGCACCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS TCA 72 bp CCACGGCGTGTGTGCCCCGCTGTCTCATGGCCCACGTaGTCTGCCACACGTGCAGCCCACGGGTATACCCGA +
Preference number: 6 (lower is better)
Translates to: PRRVCPAVSWPT*SATRAAHGYTR
Trigger: TCGGGTATACCCGTGGGCTGCACGTGTGGCAGATCACGTGGGCCATGAGACAGCGGGGCACACACGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS TCA 72 bp CCAGGGCCAGGCGCACCGAGCGACGGCACAAATCCATaGGCGGCAGCGGCTCGGGATCGAGTCCGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: PGPGAPSDGTNP*AAAARDRVRSS
Trigger: ACTTGAACGGACTCGATCCCGAGCCGCTGCCGCTCATGGATTTGTGCCGTCGCTCGGTGCGCCTGGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
CDS GCA 72 bp GCGTGTGTGCCCCGCTGTCTCATGGCCCACGTGATCTaGCACACGTGCAGCCCACGGGTATACCCGACTTTG +
Preference number: 6 (lower is better)
Translates to: ACVPRCLMAHVI*HTCSPRVYPTL
Trigger: CAAAGTCGGGTATACCCGTGGGCTGCACGTGTGGCAGATCACGTGGGCCATGAGACAGCGGGGCACACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS GCA 72 bp ATTCCTAATGAGGGCTGCCAGGAGACCTCTGCAAGCTaGGCAGTGTTCAGTATTGCCGCGCCCGGGGTGCCG +
Preference number: 6 (lower is better)
Translates to: IPNEGCQETSAS*AVFSIAAPGVP
Trigger: CGGCACCCCGGGCGCGGCAATACTGAACACTGCGCAGCTTGCAGAGGTCTCCTGGCAGCCCTCATTAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328089.11
CDS GCA 72 bp CCCCGCTGTCTCATGGCCCACGTGATCTGCCACACGTaGAGCCCACGGGTATACCCGACTTTGCCCCTGATA +
Preference number: 6 (lower is better)
Translates to: PRCLMAHVICHT*SPRVYPTLPLI
Trigger: TATCAGGGGCAAAGTCGGGTATACCCGTGGGCTGCACGTGTGGCAGATCACGTGGGCCATGAGACAGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS TCA 72 bp GTGAGTTGGCACCAGGTGGCTGTCGCGCTGGCGGTATaGTGGCGAACGTCACTGGTAGAGGAGGTAGGCCTT +
Preference number: 6 (lower is better)
Translates to: VSWHQVAVALAV*WRTSLVEEVGL
Trigger: AAGGCCTACCTCCTCTACCAGTGACGTTCGCCATCATACCGCCAGCGCGACAGCCACCTGGTGCCAACTCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328089.11
ENST00000357898.3
CDS TCA 72 bp CGCCGAGACAGTAGCTCCGGCCACCAAGATCCACCCTaGGCTTCTCCAAGCTTCTGCTCGTTTGTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: RRDSSSGHQDPP*ASPSFCSFVCH
Trigger: GTGACAGACAAACGAGCAGAAGCTTGGAGAAGCTCAGGGTGGATCTTGGTGGCCGGAGCTACTGTCTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS CCA 72 bp GCAGTGTTCAGTATTGCCTTCCCTGGAACTGCAGCCTaGAGGGTGCTTCCCCAGCCCTGCTTCCTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: AVFSIAFPGTAA*RVLPQPCFLKL
Trigger: AAGCTTCAGGAAGCAGGGCTGGGGAAGCACCCTCCAGGCTGCAGTTCCAGGGAAGGCAATACTGAACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS CCA 72 bp GATCCCTCCAGTGACCTTCTGACCCATGTTCGCCCCTaGCTTCACCTTCTTACCGACTCCCAAGGCAAACTC +
Preference number: 6 (lower is better)
Translates to: DPSSDLLTHVRP*LHLLTDSQGKL
Trigger: GAGTTTGCCTTGGGAGTCGGTAAGAAGGTGAAGCCAGGGGCGAACATGGGTCAGAAGGTCACTGGAGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS GCA 72 bp ATTCCTAATGAGGGCTGCCAGGAGACCTCTGCAAGCTaGGCAGTGTTCAGTATTGCTCAGGAAGCAGCCCCT +
Preference number: 6 (lower is better)
Translates to: IPNEGCQETSAS*AVFSIAQEAAP
Trigger: AGGGGCTGCTTCCTGAGCAATACTGAACACTGCGCAGCTTGCAGAGGTCTCCTGGCAGCCCTCATTAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450402.1
CDS GCA 72 bp ATTCCTAATGAGGGCTGCCAGGAGACCTCTGCAAGCTaGGCAGTGTTCAGTATTGCCTTCCCTGGAACTGCA +
Preference number: 6 (lower is better)
Translates to: IPNEGCQETSAS*AVFSIAFPGTA
Trigger: TGCAGTTCCAGGGAAGGCAATACTGAACACTGCGCAGCTTGCAGAGGTCTCCTGGCAGCCCTCATTAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS CAA 72 bp GCCAGGAGACCTCTGCAAGCTGCGCAGTGTTCAGTATaGCCTAATGGACGGAAAGACAAACAACCGGTGAGC +
Preference number: 6 (lower is better)
Translates to: ARRPLQAAQCSV*PNGRKDKQPVS
Trigger: GCTCACCGGTTGTTTGTCTTTCCGTCCATTAGGCAATACTGAACACTGCGCAGCTTGCAGAGGTCTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377399.2
CDS TCA 72 bp CCATGTCCAGGGCTACCAGGAAGGAGTCAGGGACAATaGATGTCTCATCTGGTTCCAGAAAGGCTGGGTATG +
Preference number: 6 (lower is better)
Translates to: PCPGLPGRSQGQ*MSHLVPERLGM
Trigger: CATACCCAGCCTTTCTGGAACCAGATGAGACATTCATTGTCCCTGACTCCTTCCTGGTAGCCCTGGACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS CAA 90 bp CCGGCCACCAAGATCCACCCTGAGCTTCTCCAAGCTTCTGCTCGTTaGTCTGTCACACACTTACCTAAAACTCAGTGGAGACAGTGTTCC +
Preference number: 6 (lower is better)
Translates to: PATKIHPELLQASAR*SVTHLPKTQWRQCS
Trigger: GGAACACTGTCTCCACTGAGTTTTAGGTAAGTGTGTGACAGACAAACGAGCAGAAGCTTGGAGAAGCTCAGGGTGGATCTTGGTGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357898.3
CDS TCA 72 bp CACAAAGACATTGAGCGATCGGTCGTTGTTGTTCCATaGATGCAGCAGCTGGACATCATAGGACACAGGGGG +
Preference number: 6 (lower is better)
Translates to: HKDIERSVVVVP*MQQLDIIGHRG
Trigger: CCCCCTGTGTCCTATGATGTCCAGCTGCTGCATTCATGGAACAACAACGACCGATCGCTCAATGTCTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS CCA 72 bp TTCTTACCGACTCCCAAGGCAAACTCATCAATCTCGTaGTCTCGTCTCCAGTATTCTGATCGGGGCCAGACA +
Preference number: 6 (lower is better)
Translates to: FLPTPKANSSIS*SRLQYSDRGQT
Trigger: TGTCTGGCCCCGATCAGAATACTGGAGACGAGACCACGAGATTGATGAGTTTGCCTTGGGAGTCGGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1
CDS TCA 72 bp AAACTCATCAATCTCGTGGTCTCGTCTCCAGTATTCTaGTCGGGGCCAGACAGAATTCCTAATGAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: KLINLVVSSPVF*SGPDRIPNEGC
Trigger: GCAGCCCTCATTAGGAATTCTGTCTGGCCCCGATCAGAATACTGGAGACGAGACCACGAGATTGATGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328089.11
ENST00000357898.3
ENST00000377399.2
ENST00000450402.1