RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPRYD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000176422

Ensembl transcript IDs: ENST00000338146.7

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAATCAGGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGGATCTaGCCCATCACAGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGC +
Preference number: 1 (lower is better)
Translates to: ESGSVMAATLANGGI*PITGESVLSAEAVR
Trigger: GCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATGACACTGCCTGATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TGGGCACCTGTGGTCCCAGCTGCTCGGGAGGCTAAGGCAGGAGAATaGTATGAACCCGGGAGGCGGAGCTTGCAGTTGAGCCGAGATCCT +
Preference number: 1 (lower is better)
Translates to: WAPVVPAAREAKAGE*YEPGRRSLQLSRDP
Trigger: AGGATCTCGGCTCAACTGCAAGCTCCGCCTCCCGGGTTCATACCATTCTCCTGCCTTAGCCTCCCGAGCAGCTGGGACCACAGGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TCAGCTGTAGGTCTCCCAGGGCTTGAGCAAGAACCTGGGAGCAGCTaGGCAGCAACACCCTGGAGCCAATCACAGCCCCTCCTGGGGAAG +
Preference number: 1 (lower is better)
Translates to: SAVGLPGLEQEPGSS*AATPWSQSQPLLGK
Trigger: CTTCCCCAGGAGGGGCTGTGATTGGCTCCAGGGTGTTGCTGCCCAGCTGCTCCCAGGTTCTTGCTCAAGCCCTGGGAGACCTACAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp CCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCTaGGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCATTCCT +
Preference number: 1 (lower is better)
Translates to: PSPTVGSAPSQARVC*VLKQCATPSASCIP
Trigger: AGGAATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp TTAGCCCCTGGCTGCATTTCGCCATGGCATGCTGTCCTCTCCAGCTaGCCCAGTGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCAT +
Preference number: 1 (lower is better)
Translates to: LAPGCISPWHAVLSS*PSGSLTPLPGAPAH
Trigger: ATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGGGGCAGCTGGAGAGGACAGCATGCCATGGCGAAATGCAGCCAGGGGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp AGGGGAGGCAGGGCACAGGTGCCGAACACAGGCCAACCCCTTTCATaGCATCTGTCTGCCTCCAGGCACTCTGTGGGCCACACAAAGATC +
Preference number: 1 (lower is better)
Translates to: RGGRAQVPNTGQPLS*HLSASRHSVGHTKI
Trigger: GATCTTTGTGTGGCCCACAGAGTGCCTGGAGGCAGACAGATGCCATGAAAGGGGTTGGCCTGTGTTCGGCACCTGTGCCCTGCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp AACACTGCTCAGGGCCGAGGGAACAGGACAGACTGTCCTTGCCCTTaGCCTTTCCCTACACCCGAGGGTCCCATGTGCAGGTTCACGTCA +
Preference number: 1 (lower is better)
Translates to: NTAQGRGNRTDCPCP*PFPTPEGPMCRFTS
Trigger: TGACGTGAACCTGCACATGGGACCCTCGGGTGTAGGGAAAGGGCAAGGGCAAGGACAGTCTGTCCTGTTCCCTCGGCCCTGAGCAGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp GGCACAGGTGCCGAACACAGGCCAACCCCTTTCATGGCATCTGTCTaGCTCCAGGCACTCTGTGGGCCACACAAAGATCCCCTTCTGCCT +
Preference number: 1 (lower is better)
Translates to: GTGAEHRPTPFMASV*LQALCGPHKDPLLP
Trigger: AGGCAGAAGGGGATCTTTGTGTGGCCCACAGAGTGCCTGGAGGCAGACAGATGCCATGAAAGGGGTTGGCCTGTGTTCGGCACCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTaGATGGTCAACGGTGAGATGCTGGGCAAGAGGAAGGGGAGGCAG +
Preference number: 1 (lower is better)
Translates to: WPSQTQTCGVSPCAL*MVNGEMLGKRKGRQ
Trigger: CTGCCTCCCCTTCCTCTTGCCCAGCATCTCACCGTTGACCATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTTGACTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp TCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTaGCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCATAGGGGG +
Preference number: 1 (lower is better)
Translates to: SGAILLVVPNVMGMM*LSPPLDKLGNSHRG
Trigger: CCCCCTATGGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp CCAAATGCCAGAGACAAGGGGAGGACAGCACTATTGGGCACTGATTaGCCACTTCTGGGTGTGGGACACCTGCAGGCAAGGGTGAATGGC +
Preference number: 1 (lower is better)
Translates to: PNARDKGRTALLGTD*PLLGVGHLQARVNG
Trigger: GCCATTCACCCTTGCCTGCAGGTGTCCCACACCCAGAAGTGGCCAATCAGTGCCCAATAGTGCTGTCCTCCCCTTGTCTCTGGCATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TTTCTCTACCCACTCATGTCCAGGTGGCAGCCTACATCCCTCAGCTaGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTG +
Preference number: 1 (lower is better)
Translates to: FLYPLMSRWQPTSLS*PSQTQTCGVSPCAL
Trigger: CAGTGCACAGGGAGACACCCCACAGGTCTGGGTTTGACTTGGCCAGCTGAGGGATGTAGGCTGCCACCTGGACATGAGTGGGTAGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp ACACCCACTTTATCCTCAGCTTCAGTTCTGTTCCCCAGGTGGGCCTaGCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC +
Preference number: 1 (lower is better)
Translates to: TPTLSSASVLFPRWA*QPSQLYQEPSSWWY
Trigger: GTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCCCACCTGGGGAACAGAACTGAAGCTGAGGATAAAGTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp TGTGAAGCCCCTCACCTATGCCATCTCCATAAGCACCCTAGGCACTaGCTACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCG +
Preference number: 1 (lower is better)
Translates to: CEAPHLCHLHKHPRH*LRAQVCGQRAKWPA
Trigger: CGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGAGATGGCATAGGTGAGGGGCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp CTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATaGTGTGCCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCATA +
Preference number: 1 (lower is better)
Translates to: LYQEPSSWWYPMSWE*CACHPHWTSWGTAI
Trigger: TATGGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp CAGCAGGGACCCACATGTTATGCTGACAATGTCAGTATAAGAGACTaGACCACCTCCGTCATCCCCACTCAGTACTGTTCCCTGCCCCCA +
Preference number: 1 (lower is better)
Translates to: QQGPTCYADNVSIRD*TTSVIPTQYCSLPP
Trigger: TGGGGGCAGGGAACAGTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGCATAACATGTGGGTCCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp GCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTaGGCTACAACAAGCTCTCCCTCAATGAGGAAGGTGAGCACTACC +
Preference number: 1 (lower is better)
Translates to: ALTTCTSLWAKSQVA*ATTSSPSMRKVSTT
Trigger: GGTAGTGCTCACCTTCCTCATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp CTTCTCCACATCCATCTCCCTTTTCTCTACCCACTCATGTCCAGGTaGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGT +
Preference number: 1 (lower is better)
Translates to: LLHIHLPFLYPLMSR*QPTSLSWPSQTQTC
Trigger: ACAGGTCTGGGTTTGACTTGGCCAGCTGAGGGATGTAGGCTGCCACCTGGACATGAGTGGGTAGAGAAAAGGGAGATGGATGTGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp ACAGCTATCCAGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTaGCCCACTCAAAACCATCCCAGCTCTTCACCCAGGTCTCCTCTT +
Preference number: 1 (lower is better)
Translates to: TAIQRDWASRYSLMA*PTQNHPSSSPRSPL
Trigger: AAGAGGAGACCTGGGTGAAGAGCTGGGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGGATAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp ATTCCCTCAGCAGACAGAGTACAGAGAAGGGCCTCAGAGGACACCTaGAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTACAGCCTA +
Preference number: 1 (lower is better)
Translates to: IPSADRVQRRASEDT*STAIQRDWASRYSL
Trigger: TAGGCTGTACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCCTTCTCTGTACTCTGTCTGCTGAGGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp AGAAGGGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTaGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCAT +
Preference number: 1 (lower is better)
Translates to: RRASEDTCSTAIQRD*ASRYSLMACPTQNH
Trigger: ATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTaGGGCTCTGATTCCTTTGAGGGTCCCCAGAAGGCACATGAGGCA +
Preference number: 1 (lower is better)
Translates to: CSCIPHICSALQGDW*GSDSFEGPQKAHEA
Trigger: TGCCTCATGTGCCTTCTGGGGACCCTCAAAGGAATCAGAGCCCCACCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp CTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTaGTGGGGCTCTGATTCCTTTGAGGGTCCCCAGAAGGCACATGAG +
Preference number: 1 (lower is better)
Translates to: LCSCIPHICSALQGD*WGSDSFEGPQKAHE
Trigger: CTCATGTGCCTTCTGGGGACCCTCAAAGGAATCAGAGCCCCACCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp AGGAGACAGGATTCGAGTCAGGAAAATGAACGTGGGAGTCAGGGATaGGGGTTTGGATTGAGAATGGAAGTGGGATGGCCCAGCAAGCTG +
Preference number: 1 (lower is better)
Translates to: RRQDSSQENERGSQG*GFGLRMEVGWPSKL
Trigger: CAGCTTGCTGGGCCATCCCACTTCCATTCTCAATCCAAACCCTCATCCCTGACTCCCACGTTCATTTTCCTGACTCGAATCCTGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp GGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTaGAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCCTACACAC +
Preference number: 1 (lower is better)
Translates to: GGATFPWMMLCSSTI*RWSNCFKITRTPTH
Trigger: GTGTGTAGGAGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp GCTGCTTTCCCACTACCCTCAGGTTTGCCTTGTCAGCCATGGATATaGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTG +
Preference number: 1 (lower is better)
Translates to: AAFPLPSGLPCQPWI*NRKTMTRAQLCMLL
Trigger: CAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTGAGGGTAGTGGGAAAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp CCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTaGTTCAAGATTACCAGGACTCCTACACACTCTCTGAAACTCAGG +
Preference number: 1 (lower is better)
Translates to: PWMMLCSSTIWRWSN*FKITRTPTHSLKLR
Trigger: CCTGAGTTTCAGAGAGTGTGTAGGAGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp GCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTaGTCAAACTGCTTCAAGATTACCAGGACTCCTACACACTCTCTG +
Preference number: 1 (lower is better)
Translates to: ATFPWMMLCSSTIWR*SNCFKITRTPTHSL
Trigger: CAGAGAGTGTGTAGGAGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTaGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTGC +
Preference number: 1 (lower is better)
Translates to: CLIISLFLSGGATFP*MMLCSSTIWRWSNC
Trigger: GCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp CTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTaGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTG +
Preference number: 1 (lower is better)
Translates to: LSTSPLPDHIIIPLR*GNIPLDDAVQFNHL
Trigger: CAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp TCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGATGATGCTGTaGAGTTCAACCATCTGGAGGTGGTCAAACTGCTTCAAGATTACC +
Preference number: 1 (lower is better)
Translates to: SLFLSGGATFPWMML*SSTIWRWSNCFKIT
Trigger: GGTAATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGAGAGGAATAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TACCAGGTGCACCAGCCCATACTAGAAGCCTTATTTCCAGAAATGTaGAAATCTGCTGGCCTCAGAGAGGAAAGCCTCTTGACAAGACCT +
Preference number: 1 (lower is better)
Translates to: YQVHQPILEALFPEM*KSAGLREESLLTRP
Trigger: AGGTCTTGTCAAGAGGCTTTCCTCTCTGAGGCCAGCAGATTTCCACATTTCTGGAAATAAGGCTTCTAGTATGGGCTGGTGCACCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp CTGCTATCCATCTGTCATGAGCCCAGTGCTAAGAAGAGAGAACACTaGCTCTCTCAAGATAGAGGTGGAAGCTTGTTCCTGCCTCTCATT +
Preference number: 1 (lower is better)
Translates to: LLSICHEPSAKKREH*LSQDRGGSLFLPLI
Trigger: AATGAGAGGCAGGAACAAGCTTCCACCTCTATCTTGAGAGAGTCAGTGTTCTCTCTTCTTAGCACTGGGCTCATGACAGATGGATAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp AGCCACCATGCAAATATATACAACCACCACTCTCCACGTCTCCTTTaGCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCC +
Preference number: 1 (lower is better)
Translates to: SHHANIYNHHSPRLL*LIISLFLSGGATFP
Trigger: GGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGGTTGTATATATTTGCATGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp AGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTaGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGC +
Preference number: 1 (lower is better)
Translates to: RIWEVGMAIYMALVV*RNLLPLARTCCCYC
Trigger: GCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTaGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA +
Preference number: 1 (lower is better)
Translates to: SPLPLPEETIMREIL*WRDSSYHAHVHIHR
Trigger: TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp GAATATTTCAGAGTAGCACATTCCATAACACTTCAGCAATACCCTTaGACTAAGCATCCATGGAGGAGGGTCACAGGGCACAGCTGGCAT +
Preference number: 1 (lower is better)
Translates to: EYFRVAHSITLQQYP*TKHPWRRVTGHSWH
Trigger: ATGCCAGCTGTGCCCTGTGACCCTCCTCCATGGATGCTTAGTCCAAGGGTATTGCTGAAGTGTTATGGAATGTGCTACTCTGAAATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp ACCATGCAAATATATACAACCACCACTCTCCACGTCTCCTTTGCCTaGTCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGA +
Preference number: 1 (lower is better)
Translates to: TMQIYTTTTLHVSFA*SYHYSSQVGQHSPG
Trigger: TCCAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGGTTGTATATATTTGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp ACTAAGCATCCATGGAGGAGGGTCACAGGGCACAGCTGGCATAGGTaGGTTCAATTAATGTCATGTGGGTATGATTTGTGTTCCAGAACA +
Preference number: 1 (lower is better)
Translates to: TKHPWRRVTGHSWHR*VQLMSCGYDLCSRT
Trigger: TGTTCTGGAACACAAATCATACCCACATGACATTAATTGAACTCACCTATGCCAGCTGTGCCCTGTGACCCTCCTCCATGGATGCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp ATACATGGGTTTCAGCAATGCCACGTAAGTCCCTACTCAGAGGACTaGCTGAAAGCATTGTGGTGTATGTGTGTGTACTTAGGATGGGGA +
Preference number: 1 (lower is better)
Translates to: IHGFQQCHVSPYSED*LKALWCMCVYLGWG
Trigger: TCCCCATCCTAAGTACACACACATACACCACAATGCTTTCAGTCAGTCCTCTGAGTAGGGACTTACGTGGCATTGCTGAAACCCATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp CCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTaGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA +
Preference number: 1 (lower is better)
Translates to: PLPLPEETIMREILW*RDSSYHAHVHIHRI
Trigger: TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp GAAAGAAGTTTGTCATTCCTGATTTTGAGGAGTTCACGGGCCATGTaGATCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGGCAAAG +
Preference number: 1 (lower is better)
Translates to: ERSLSFLILRSSRAM*IASLRMSKSSLEAK
Trigger: CTTTGCCTCCAGTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATGGCCCGTGAACTCCTCAAAATCAGGAATGACAAACTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 90 bp CTCCCAACACCCACTCCTCCAACTTCAAGTACTAAATTGGGTGTTTaGTTCAGATTCCAGTCAGAGAAGGAAACAGGGGATCGGAATTAT +
Preference number: 1 (lower is better)
Translates to: LPTPTPPTSSTKLGV*FRFQSEKETGDRNY
Trigger: ATAATTCCGATCCCCTGTTTCCTTCTCTGACTGGAATCTGAAGCAAACACCCAATTTAGTACTTGAAGTTGGAGGAGTGGGTGTTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 90 bp TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATaGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGA +
Preference number: 1 (lower is better)
Translates to: WRDSSYHAHVHIHRI*EVGMAIYMALVVWR
Trigger: TCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 90 bp CCCCTCATTTTAGAGGTACGGAAACTAAGACCTAGAAAGGTAAACTaGTTTGCCAAAGGTAACAGAGCTGTTGATCCCAAACCTGAAGAC +
Preference number: 1 (lower is better)
Translates to: PLILEVRKLRPRKVN*FAKGNRAVDPKPED
Trigger: GTCTTCAGGTTTGGGATCAACAGCTCTGTTACCTTTGGCAAATCAGTTTACCTTTCTAGGTCTTAGTTTCCGTACCTCTAAAATGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCCTGTCACCCCCATTaGACAAGCTGGGGAACAGCC +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECACHPH*TSWGTA
Trigger: GGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGC...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTCAGGAGCCATCCTCCTaGTGGTACCCAATGTCATGG +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECQEPSS*WYPMSW
Trigger: CCATGACATTGGGTACCACCAGGAGGATGGCTCCTG...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCCTCAGAGGACACCTaGAGTACAGCTATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECASEDT*STAIQR
Trigger: TCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGC...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAAGTGGGAGGATCGCTTaGGCCTGGGAGGTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPISGRIA*AWEVKA
Trigger: AGCTTTGACCTCCCAGGCTCAAGCGATCCTCCCACT...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGGACCAAGGGCCAAATaGCAGAGACAAGGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPIGPRAK*QRQGED
Trigger: GTCCTCCCCTTGTCTCTGGCATTTGGCCCTTGGTCC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACCCCATTGGACAAGCTaGGGAACAGCCATAGGGGGA +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPIPHWTS*GTAIGG
Trigger: TCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGGGG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTTGTGCTTCACATTGCTaGCTCTTCTCCTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECCASHC*LFSLGS
Trigger: AGACCCCAAGGAGAAGAGCCAGCAATGTGAAGCACA...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACCACTCATGTCCAGGTaGCAGCCTACATCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPIPLMSR*QPTSLS
Trigger: GCTGAGGGATGTAGGCTGCCACCTGGACATGAGTGG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 90 bp GTAAGAAAACACTGCTCAGGGCCGAGGGAACAGGACAGACTGTCCTaGCCCTTGCCCTTTCCCTACACCCGAGGGTCCCATGTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: VRKHCSGPREQDRLS*PLPFPYTRGSHVQV
Trigger: AACCTGCACATGGGACCCTCGGGTGTAGGGAAAGGGCAAGGGCAAGGACAGTCTGTCCTGTTCCCTCGGCCCTGAGCAGTGTTTTCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTACCACAGGTAGGCAGTaGGTGATATTTCTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECTTGRQ*VIFLEG
Trigger: TCCTTCCAGAAATATCACTCACTGCCTACCTGTGGT...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTATGAGAGAGATACTCTaGTGGAGGGACTCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECMREIL*WRDSSY
Trigger: GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCAT...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATCCCCAGAAGGCACATaGGGCACAGCAGGGACCCAC +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTSPEGT*GTAGTH
Trigger: GTGGGTCCCTGCTGTGCCTCATGTGCCTTCTGGGGA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTTGGAGGTGGTCAAACTaGTTCAAGATTACCAGGACT +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECWRWSN*FKITRT
Trigger: AGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCA...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTTTCCTGATCGAGGCTTaGAAAGTGAATCCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECFLIEA*KVNPFA
Trigger: GGCAAAAGGATTCACTTTGCAAGCCTCGATCAGGAA...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACTCTCTTCCTTGCAGTaGTTTCCTAAGGGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPILSSLQ*FPKGVD
Trigger: GTCCACCCCCTTAGGAAAGCACTGCAAGGAAGAGAG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGTACCCTGCCTCAAATaGGCACTTACCACAGGTAGG +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPIVPCLK*ALTTGR
Trigger: CCTACCTGTGGTAAGTGCCCATTTGAGGCAGGGTAC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGGCTGCATTTCGCCATaGCATGCTGTCCTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVGCISP*HAVLSS
Trigger: GCTGGAGAGGACAGCATGCCATGGCGAAATGCAGCC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGGCCACTTCTGGGTGTaGGACACCTGCAGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYGHFWV*DTCRQG
Trigger: CCCTTGCCTGCAGGTGTCCCACACCCAGAAGTGGCC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGGAGGCCAAGGTGGGCTaGTCACATGAGGCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWEAKVG*SHEARS
Trigger: ACTCCTGGCCTCATGTGATCAGCCCACCTTGGCCTC...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACTGAGATTACAGGCATaGACCATCATGCTGGCCAAT +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPILRLQA*TIMLAN
Trigger: ATTGGCCAGCATGATGGTTCATGCCTGTAATCTCAG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCCGAGATTGTGCCATTaGACTGTAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVPRLCH*TVAWAT
Trigger: TGTTGCCCAGGCTACAGTGCAATGGCACAATCTCGG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGACTGAGCCGAGATTGTaGCATTGCACTGTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVTEPRL*HCTVAW
Trigger: CCAGGCTACAGTGCAATGGCACAATCTCGGCTCAGT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCCCGAGGGTCCCATGTaGAGGTTCACGTCACATCTT +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKPEGPM*RFTSHL
Trigger: AAGATGTGACGTGAACCTGCACATGGGACCCTCGGG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGACTGTCCTTGCCCTTaGCCTTTCCCTACACCCGAG +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYDCPCP*PFPTPE
Trigger: CTCGGGTGTAGGGAAAGGGCAAGGGCAAGGACAGTC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCATTAGCCAGACGTGGTaGCACGCGCCTGTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVISQTW*HAPVVP
Trigger: TGGGACCACAGGCGCGTGCCACCACGTCTGGCTAAT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAAATCAGGCAGTGTCATaGCAGCCACCCTCGCCAACG +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTNQAVS*QPPSPT
Trigger: CGTTGGCGAGGGTGGCTGCCATGACACTGCCTGATT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAAATGTGGAAATCTGCTaGCCTCAGAGAGGAAAGCCT +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPINVEIC*PQRGKP
Trigger: AGGCTTTCCTCTCTGAGGCCAGCAGATTTCCACATT...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGACTTGGAGGCTGAAGTaGGAGGATCGCTTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKTWRLK*EDRLSL
Trigger: CAGGCTCAAGCGATCCTCCCACTTCAGCCTCCAAGT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTGGGCAGCAACACCCTaGAGCCAATCACAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWWAATP*SQSQPL
Trigger: GAGGGGCTGTGATTGGCTCCAGGGTGTTGCTGCCCA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 90 bp TACAGCTATCCAGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTaGCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: YSYPERLGFKVQPNG*PHSKPSQLFTQVSS
Trigger: AGAGGAGACCTGGGTGAAGAGCTGGGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGGATAGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGGATGGAATACAGTCTaGGAAAGGCCTGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKGWNTV*ERPGQR
Trigger: CCTTTGCCCAGGCCTTTCTCAGACTGTATTCCATCC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACGAAGGTCTGTGGCACTaGGCTACTGGGGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: REILWWRDSSYHAHVHIHEGLWH*ATGEGG
Trigger: CCCTCCTTCCCCAGTAGCTCAGTGCCACAGACCTTC...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGAGGCAGAGTTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKRQSLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAAACTCTGCCT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCAACATTCCCCTGGATaGTGCTGTGCAGTTCAACCA +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVQHSPG*CCAVQP
Trigger: TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGAAACTCATCCAGTCTaGCACCAGTTCACAAAGAAC +
Preference number: 2 (lower is better)
Translates to: KARAFLGATGRREPLCPIETHPV*HQFTKN
Trigger: GTTCTTTGTGAACTGGTGTCAGACTGGATGAGTTTC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCGTTAGACCCACGGCGTaGAGGGGCAGAAATTCGGGT +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVVRPTA*RGRNSG
Trigger: ACCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAAC...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGACAACTATGACAACCTaGGGCACTGTGCTCGGAAGT +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVTTMTT*GTVLGS
Trigger: ACTTCCGAGCACAGTGCCTCAGGTTGTCATAGTTGT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTCCACTAGATCCTTCTaGCCCTTCCCTCTGTCATCC +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKSTRSF*PFPLSS
Trigger: GGATGACAGAGGGAAGGGTCAGAAGGATCTAGTGGA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACACGTCACCTGGAACTGTaGGTTGGCCTTGAACAGGGT +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTRHLEL*VGLEQG
Trigger: ACCCTGTTCAAGGCCAACTCACAGTTCCAGGTGACG...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGTATGGAGAGCTACACTaGTTCAGTGGGGACCAAGCA +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVYGELH*FSGDQA
Trigger: TGCTTGGTCCCCACTGAAGCAGTGTAGCTCTCCATA...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGTCATGGACAGCCCCTaGTCAAGAAAAAGCATGAGC +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVVMDSP*SRKSMS
Trigger: GCTCATGCTTTTTCTTGAGCAGGGGCTGTCCATGAC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAACTCGCGCACAGCTCTaGATGTTGCTGCAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTTRAQL*MLLQLK
Trigger: CTTCAGCTGCAGCAACATGCAGAGCTGTGCGCGAGT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCTTCCCCAGGTGGGCCTaGCAGCCAAGTCAGCTGTAT +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVFPRWA*QPSQLY
Trigger: ATACAGCTGACTTGGCTGGCAGGCCCACCTGGGGAA...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAAGGCTGAGGCAGAAGTaGTTGAACCTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTRLRQK*LNLGGR
Trigger: TCTGCCTCCCAGGTTCAAGCACTTCTGCCTCAGCCT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTGCTACTTAGCCCCTaGCTGCATTTCGCCATGGCA +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKLLLSP*LHFAMA
Trigger: TGCCATGGCGAAATGCAGCCAGGGGCTAAGTAGCAA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTCCCCCATAACCCCATaGTCAATGCTGGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKSPITP*SMLVPL
Trigger: CAATGGCACCAGCATTGACCATGGGGTTATGGGGGA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACTGTGGAGGTCACTTGTaGATCAGGCAGTGTCATGGC +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYCGGHL*IRQCHG
Trigger: GCCATGACACTGCCTGATTCACAAGTGACCTCCACA...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGAGGTCAAAGCTGCAGTaGGCCATGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWRSKLQ*AMIVPL
Trigger: CAGTGGCACGATCATGGCTCACTGCAGCTTTGACCT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGAGGCATGAACCATCATaGTGGCCAATGGGATGGAGT +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKRHEPS*WPMGWS
Trigger: ACTCCATCCCATTGGCCAGCATGATGGTTCATGCCT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGGGTCTCTCCTATGTTaGCTAGGCTGGTCTCAAACC +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYGSLLC*LGWSQT
Trigger: GGTTTGAGACCAGCCTAGGCAACATAGGAGAGACCC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGGGGCAACATTCCCCTaGATGATGCTGTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYGATFP*MMLCSS
Trigger: TGAACTGCACAGCATCATCCAGGGGAATGTTGCCCC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGATTATTCCTCTCAGGTaGGGCAACATTCCCCTGGAT +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVIIPLR*GNIPLD
Trigger: ATCCAGGGGAATGTTGCCCCACCTGAGAGGAATAAT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCAAAATTAGCCAGACGTaGTGGCACGCGCCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVKISQT*WHAPVV
Trigger: GACCACAGGCGCGTGCCACCACGTCTGGCTAATTTT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACGGCTGGCCAAAGGCGTaGTTAGGGACTCCAGTAATG +
Preference number: 2 (lower is better)
Translates to: REILWWRDSSYHAHVHIHGWPKA*LGTPVM
Trigger: CATTACTGGAGTCCCTAATCACGCCTTTGGCCAGCC...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCAGCTAGACTATGACTaGGTGCTGCAGGGTACAAAA +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKQLDYD*VLQGTK
Trigger: TTTTGTACCCTGCAGCACTCAGTCATAGTCTAGCTG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCGGAACAGAAAGACTATaGCTCGCGCACAGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVGTERL*LAHSSA
Trigger: TGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCC...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACAGTTTGCCTTCCACGTaGGTTTCTGGCTCTGCTATC +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYSLPST*VSGSAI
Trigger: GATAGCAGAGCCAGAAACTCACGTGGAAGGCAAACT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGGGCTAGTCAACCTGTaGGGTATTAATAGAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVGLVNL*GINRAS
Trigger: AGAAGCTCTATTAATACCTCACAGGTTGACTAGCCC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTCCTGGCTAGCACGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSWLAR*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCGTGCTAGCCAGGA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCATGGGTTTCAGCAATaGCACGTAAGTCCCTACTCA +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKHGFQQ*HVSPYS
Trigger: TGAGTAGGGACTTACGTGGCATTGCTGAAACCCATG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGATGATTATGACAGACTaGCTGGGTGTCAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVMIMTD*LGVRGT
Trigger: TGTACCTCTGACACCCAGCCAGTCTGTCATAATCAT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCAGTTCGAGACCAGCCTaGCCAATATGGCAAAACCCC +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVSSRPA*PIWQNP
Trigger: GGGGTTTTGCCATATTGGCCAGGCTGGTCTCGAACT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGGAAATCTACTCCCCTTaGCCAGGACATGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWEIYSP*PGHAAA
Trigger: AGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTC...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGAGAGAGATACTCTGGTaGAGGGACTCTAGCTACCAT +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKREILW*RDSSYH
Trigger: ATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGCCAAAAGGTTGAGGTaGATTGTGGTCATGCAGTCA +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKAKRLR*IVVMQS
Trigger: TGACTGCATGACCACAATCCACCTCAACCTTTTGGC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCCTCCAGCTGCCCCAGTaGCTCTCTAACCCCACTACC +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISLQLPQ*LSNPTT
Trigger: GGTAGTGGGGTTAGAGAGCCACTGGGGCAGCTGGAG...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCTACAAACCTGTATCTaGGACCTGCCTCATCCCATT +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKLQTCI*DLPHPI
Trigger: AATGGGATGAGGCAGGTCCCAGATACAGGTTTGTAG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCCTATTGGGCACTGATTaGCCACTTCTGGGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVLLGTD*PLLGVG
Trigger: TCCCACACCCAGAAGTGGCCAATCAGTGCCCAATAG...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGGAGGCTTTGTTCAGTaGCTAAGACTCTTGGTGGTT +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKGGFVQ*LRLLVV
Trigger: AACCACCAAGAGTCTTAGCCACTGAACAAAGCCTCC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 90 bp GATCTAGGCAACTCTAGCTGCTTTCCCACTACCCTCAGGTTTGCCTaGTCAGCCATGGATATGGAACAGAAAGACTATGACTCGCGCACA +
Preference number: 2 (lower is better)
Translates to: DLGNSSCFPTTLRFA*SAMDMEQKDYDSRT
Trigger: TGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTGAGGGTAGTGGGAAAGCAGCTAGAGTTGCCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATCGAGGCTTGCAAAGTaGATCCTTTTGCCAAGGACA +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTSRLAK*ILLPRT
Trigger: TGTCCTTGGCAAAAGGATTCACTTTGCAAGCCTCGA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCACAAAGAACACCTGTaGTTCCAGTCTGATCTAGGC +
Preference number: 2 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVHKEHL*FQSDLG
Trigger: GCCTAGATCAGACTGGAATCACAGGTGTTCTTTGTG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATCCTGGCTAACACGGTaGAACCTGGTCTCTATTGAA +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTSWLTR*NLVSIE
Trigger: TTCAATAGAGACCAGGTTTCACCGTGTTAGCCAGGA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAGAGAGGAAAGCCTCTTaGCAAGACCTGAGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTERKAS*QDLSSE
Trigger: TTCTGAACTCAGGTCTTGTCAAGAGGCTTTCCTCTC...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTTCGAGTCAGGAAAATaGACGTGGGAGTCAGGGATG +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWFESGK*TWESGM
Trigger: CATCCCTGACTCCCACGTTCATTTTCCTGACTCGAA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGTACAGCCTAATGGCTTaGCCCACTCAAAACCATCCC +
Preference number: 2 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWYSLMA*PTQNHP
Trigger: GGGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTA...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCCATTTCGCCATGGCATaGTGTCCTCTCCAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISHFAMA*CPLQLP
Trigger: GGGCAGCTGGAGAGGACAGCATGCCATGGCGAAATG...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTCTAAAAGATTCTCTTaGCCCTCAACCTCAACTCTG +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKSKRFS*PSTSTL
Trigger: CAGAGTTGAGGTTGAGGGTCAAGAGAATCTTTTAGA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGCCAAAAGGCAGAGTTTaGAGTGAGCCAAGATCATGC +
Preference number: 2 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWPKGRV*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAAACTCTGCCTTTTGG...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCCACTACCCTCAGGTTTaGCTTGTCAGCCATGGATAT +
Preference number: 2 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVHYPQV*LVSHGY
Trigger: ATATCCATGGCTGACAAGGCAAACCTGAGGGTAGTG...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGAGGGGATCGGAATTATaGCATCGGCTATTATCTCAA +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKRGSEL*HRLLSQ
Trigger: TTGAGATAATAGCCGATGGCATAATTCCGATCCCCT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTCCATTGGCTTTACTaGTATCTCTACAGGATTGCG +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKFHWLY*YLYRIA
Trigger: CGCAATCCTGTAGAGATAGCAGTAAAGCCAATGGAA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACGAAATTGGCAGTAGTTaGTGGGTGGGGAAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: REILWWRDSSYHAHVHIHEIGSS*WVGKRR
Trigger: CCTCCTTTTCCCCACCCACCAACTACTGCCAATTTC...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTGCAGTTCAACCATCTaGAGGTGGTCAAACTGCTTC +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWCSSTI*RWSNCF
Trigger: GAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTTCCACGTGAGTTTCTaGCTCTGCTATCCATCTGTC +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWFHVSF*LCYPSV
Trigger: GACAGATGGATAGCAGAGCCAGAAACTCACGTGGAA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 90 bp CAGCCACCATGCAAATATATACAACCACCACTCTCCACGTCTCCTTaGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCC +
Preference number: 2 (lower is better)
Translates to: QPPCKYIQPPLSTSP*PDHIIIPLRWGNIP
Trigger: GGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGGTTGTATATATTTGCATGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 90 bp TTTCCAGAAATGTGGAAATCTGCTGGCCTCAGAGAGGAAAGCCTCTaGACAAGACCTGAGTTCAGAAGGGCTAGTCAACCTGTGAGGTAT +
Preference number: 2 (lower is better)
Translates to: FPEMWKSAGLREESL*TRPEFRRASQPVRY
Trigger: ATACCTCACAGGTTGACTAGCCCTTCTGAACTCAGGTCTTGTCAAGAGGCTTTCCTCTCTGAGGCCAGCAGATTTCCACATTTCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCAAGCAGTCATTTGGTaGCTTAGGCTAGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWQAVIW*LRLVLS
Trigger: AGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACACACAGCTGGCATAGGTaGGTTCAATTAATGTCATGT +
Preference number: 2 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTHSWHR*VQLMSC
Trigger: ACATGACATTAATTGAACTCACCTATGCCAGCTGTG...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTTCCTGCGGCATGTATaGCTTCTCTGGCCAGTTTGC +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISFLRHV*LLWPVC
Trigger: GCAAACTGGCCAGAGAAGTCATACATGCCGCAGGAA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTAAGTGTATTCTGCTaGCAAGGGAAGCATAGGTTT +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKLSVFC*QGKHRF
Trigger: AAACCTATGCTTCCCTTGGCAGCAGAATACACTTAA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACTACCTTCATTATATGTaGCCTCAAGGTTATAGGGGC +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYYLHYM*PQGYRG
Trigger: GCCCCTATAACCTTGAGGGCACATATAATGAAGGTA...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCACACCCTCAGCCTCATaGATTCCTGCGGCATGTATG +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISTPSAS*IPAACM
Trigger: CATACATGCCGCAGGAATGCATGAGGCTGAGGGTGT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTACTTAGCCCCTGGCTaGATTTCGCCATGGCATGCT +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISYLAPG*ISPWHA
Trigger: AGCATGCCATGGCGAAATGCAGCCAGGGGCTAAGTA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGAAAATTGAACACATTTaGAGCAGCAGGACCAGACTA +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKKIEHI*SSRTRL
Trigger: TAGTCTGGTCCTGCTGCTGCAAATGTGTTCAATTTT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACTCAACCATCTGGAGGTaGTCAAACTGCTTCAAGATT +
Preference number: 2 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYSTIWR*SNCFKI
Trigger: AATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGA...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCACGTCTCCTTTGCCTaGTCATATCATTATTCCTCT +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWHVSFA*SYHYSS
Trigger: AGAGGAATAATGATATGATCAGGCAAAGGAGACGTG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCCTTCTCTGGCCAGTTTaGCTTCCACGTGAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISLLWPV*LPREFL
Trigger: CAGAAACTCACGTGGAAGGCAAACTGGCCAGAGAAG...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGGTTCATTTAGTTTGTaGTGTGATGTAGTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKGSFSL*CDVVLS
Trigger: AGACAGAACTACATCACACCACAAACTAAATGAACC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGAGTATCTCAACAAAATaGCTGGGAATGAATACATGG +
Preference number: 2 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKSISTK*LGMNTW
Trigger: CCATGTATTCATTCCCAGCCATTTTGTTGAGATACT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTTCAGCTGAGACCCTaGCAGTGTGAAAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQLQLRP*QCERAD
Trigger: ATCAGCCCTTTCACACTGTCAGGGTCTCAGCTGAAG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGACTGTGAGTTGGCCTTaGACAGGGTGTCAGACTAGC +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQTVSWP*TGCQTS
Trigger: GCTAGTCTGACACCCTGTTCAAGGCCAACTCACAGT...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTCTCCACGTCTCCTTTaGCTGATCATATCATTATTC +
Preference number: 2 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSPRLL*LIISLF
Trigger: GAATAATGATATGATCAGGCAAAGGAGACGTGGAGA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTCTAGGCAACTCTAGCTaGTTTCCCACTACCCTCAGG +
Preference number: 2 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCLGNSS*FPTTLR
Trigger: CCTGAGGGTAGTGGGAAAGCAGCTAGAGTTGCCTAG...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGGTCATGGGAATGATGTaGCTGTCACCCCCATTGGAC +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQVMGMM*LSPPLD
Trigger: GTCCAATGGGGGTGACAGGCACATCATTCCCATGAC...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCAGGTAAGAAAACACTaGTCAGGGCCGAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQQVRKH*SGPREQ
Trigger: CTGTTCCCTCGGCCCTGAGCAGTGTTTTCTTACCTG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACATGGCTTTAGTAGTCTaGAGAAATCTACTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: REILWWRDSSYHAHVHIHMALVV*RNLLPL
Trigger: CAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCAT...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGACAGAATATGGGAAGTaGGAATGGCTATATACATGG +
Preference number: 2 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWTEYGK*EWLYTW
Trigger: CCATGTATATAGCCATTCCCACTTCCCATATTCTGT...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGTTTGCAGCTAGACTATaGCTGAGTGCTGCAGGGTAC +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQFAARL*LSAAGY
Trigger: GTACCCTGCAGCACTCAGTCATAGTCTAGCTGCAAA...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCAGGTTAAGTGTATTCTaGTGCCAAGGGAAGCATAGG +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISRLSVF*CQGKHR
Trigger: CCTATGCTTCCCTTGGCAGCAGAATACACTTAACCT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCAGGAGCCAATGGAAGTaGGGTGTTTTCAGAAGGATA +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISRSQWK*GVFRRI
Trigger: TATCCTTCTGAAAACACCGCACTTCCATTGGCTCCT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGCTACACTGCTTCAGTaGGGACCAAGCAGTCATTTG +
Preference number: 2 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCATLLQ*GPSSHL
Trigger: CAAATGACTGCTTGGTCCCCACTGAAGCAGTGTAGC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGGTGAGTTTCTGGCTCTaGTATCCATCTGTCATGAGC +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQVSFWL*YPSVMS
Trigger: GCTCATGACAGATGGATAGCAGAGCCAGAAACTCAC...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTTGCCTTGTCAGCCATaGATATGGAACAGAAAGACT +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISLPCQP*IWNRKT
Trigger: AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGATGGGGTGTAAGGAATaGGGATGGAGATCAGGGATA +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQMGCKE*GWRSGI
Trigger: TATCCCTGATCTCCATCCCCATTCCTTACACCCCAT...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTCTGAAGAAACCATCATaGGAGAGATACTCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCLKKPS*ERYSGG
Trigger: TCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAG...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCAATGTCATGTGGGTATaGTTTGTGTTCCAGAACAAG +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISNVMWV*FVFQNK
Trigger: CTTGTTCTGGAACACAAATCATACCCACATGACATT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCAACTTGTTTATTTTCTaGTTTGGGGCACACCCACTT +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISNLFIF*FGAHPL
Trigger: AAGTGGGTGTGCCCCAAATCAGAAAATAAACAAGTT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGGGAAGGCAATTAGGTTaGGACTCCTTAGACGAGTTT +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQGRQLG*DSLDEF
Trigger: AAACTCGTCTAAGGAGTCTCAACCTAATTGCCTTCC...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGACCAGTTTTCCTAGATaGCTAGACAGTTTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQTSFPR*LDSLGC
Trigger: ACACCCCAAACTGTCTAGTCATCTAGGAAAACTGGT...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACCTCAACTCCAAATACTaGTTTAGGTTAAGTGTATTC +
Preference number: 2 (lower is better)
Translates to: REILWWRDSSYHAHVHIHLNSKY*FRLSVF
Trigger: GAATACACTTAACCTAAAGCAGTATTTGGAGTTGAG...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR GCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTACTATGACTGAGTGCTaGAGGGTACAAAATGGGAAG +
Preference number: 2 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCTMTEC*RVQNGK
Trigger: CTTCCCATTTTGTACCCTGCAGCACTCAGTCATAGT...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTGTCAGCCATGGATATaGAACAGAAAGACTATGACT +
Preference number: 2 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISCQPWI*NRKTMT
Trigger: AGTCATAGTCTTTCTGTTCCATATCCATGGCTGACA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR TCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGTTAGCCATTGTTATTaGGTGTTAAGAGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCVSHCY*VLRAVS
Trigger: GGACACTGCTCTTAACACTCAATAACAATGGCTAAC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCCACCAAAAATACTATaGAGAGCTACACTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQPPKIL*RATLLQ
Trigger: CTGAAGCAGTGTAGCTCTCCATAGTATTTTTGGTGG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGTCCAGAACAAGACTGTaGTCAACCTGTTATTTGCTG +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQSRTRL*STCYLL
Trigger: CAGCAAATAACAGGTTGACCACAGTCTTGTTCTGGA...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGGTTTATTTTCTGATTTaGGGCACACCCACTTTATCC +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQVYFLI*GTPTLS
Trigger: GGATAAAGTGGGTGTGCCCCAAATCAGAAAATAAAC...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGTTATTTCCAGAAATGTaGAAATCTGCTGGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQLFPEM*KSAGLR
Trigger: TCTGAGGCCAGCAGATTTCCACATTTCTGGAAATAA...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGGTCAAGGTTATAACTaGGATAATGATTATGACAGA +
Preference number: 2 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCGQGYN*DNDYDR
Trigger: TCTGTCATAATCATTATCCCAGTTATAACCTTGACC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp CAGGGCCGAGGGAACAGGACAGACTGTCCTTGCCCTTaGCCTTTCCCTACACCCGAGGGTCCCATGTGCAGG +
Preference number: 3 (lower is better)
Translates to: QGRGNRTDCPCP*PFPTPEGPMCR
Trigger: CCTGCACATGGGACCCTCGGGTGTAGGGAAAGGGCAAGGGCAAGGACAGTCTGTCCTGTTCCCTCGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp GGTCTCCCAGGGCTTGAGCAAGAACCTGGGAGCAGCTaGGCAGCAACACCCTGGAGCCAATCACAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: GLPGLEQEPGSS*AATPWSQSQPL
Trigger: GAGGGGCTGTGATTGGCTCCAGGGTGTTGCTGCCCAGCTGCTCCCAGGTTCTTGCTCAAGCCCTGGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp ATCAGGCAGTGTCATGGCAGCCACCCTCGCCAACGGTaGGATCTGCCCCATCACAGGCGAGAGTGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: IRQCHGSHPRQR*DLPHHRRECAE
Trigger: CTCAGCACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATGACACTGCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp TTCGCCATGGCATGCTGTCCTCTCCAGCTGCCCCAGTaGCTCTCTAACCCCACTACCAGGTGCACCAGCCCA +
Preference number: 3 (lower is better)
Translates to: FAMACCPLQLPQ*LSNPTTRCTSP
Trigger: TGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGGGGCAGCTGGAGAGGACAGCATGCCATGGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp GTGGTCCCAGCTGCTCGGGAGGCTAAGGCAGGAGAATaGTATGAACCCGGGAGGCGGAGCTTGCAGTTGAGC +
Preference number: 3 (lower is better)
Translates to: VVPAAREAKAGE*YEPGRRSLQLS
Trigger: GCTCAACTGCAAGCTCCGCCTCCCGGGTTCATACCATTCTCCTGCCTTAGCCTCCCGAGCAGCTGGGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCTaGGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: TVGSAPSQARVC*VLKQCATPSAS
Trigger: TGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGTGATGGGGCAGATCCCACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp GGCTGCATTTCGCCATGGCATGCTGTCCTCTCCAGCTaGCCCAGTGGCTCTCTAACCCCACTACCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: GCISPWHAVLSS*PSGSLTPLPGA
Trigger: TGCACCTGGTAGTGGGGTTAGAGAGCCACTGGGGCAGCTGGAGAGGACAGCATGCCATGGCGAAATGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp GCAGGTCCTGACCCCTGCCTAGGACCAAGGGCCAAATaGCAGAGACAAGGGGAGGACAGCACTATTGGGCAC +
Preference number: 3 (lower is better)
Translates to: AGPDPCLGPRAK*QRQGEDSTIGH
Trigger: GTGCCCAATAGTGCTGTCCTCCCCTTGTCTCTGGCATTTGGCCCTTGGTCCTAGGCAGGGGTCAGGACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp CCACTCATGTCCAGGTGGCAGCCTACATCCCTCAGCTaGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PLMSRWQPTSLS*PSQTQTCGVSP
Trigger: GGGAGACACCCCACAGGTCTGGGTTTGACTTGGCCAGCTGAGGGATGTAGGCTGCCACCTGGACATGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp GCCGAACACAGGCCAACCCCTTTCATGGCATCTGTCTaGCTCCAGGCACTCTGTGGGCCACACAAAGATCCC +
Preference number: 3 (lower is better)
Translates to: AEHRPTPFMASV*LQALCGPHKDP
Trigger: GGGATCTTTGTGTGGCCCACAGAGTGCCTGGAGGCAGACAGATGCCATGAAAGGGGTTGGCCTGTGTTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGGGAGGACAGCACTATaGGGCACTGATTGGCCACTT +
Preference number: 3 (lower is better)
Translates to: KARAFLGATGRREPLCPIGRTAL*GTDWPL
Trigger: AAGTGGCCAATCAGTGCCCAATAGTGCTGTCCTCCC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp GATCTGCCCCATCACAGGCGAGAGTGTGCTGAGTGCTaGAGCAGTGCGCAACACCCTCAGCCTCATGCATTC +
Preference number: 3 (lower is better)
Translates to: DLPHHRRECAEC*SSAQHPQPHAF
Trigger: GAATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGTGATGGGGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp AGAGACAAGGGGAGGACAGCACTATTGGGCACTGATTaGCCACTTCTGGGTGTGGGACACCTGCAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: RDKGRTALLGTD*PLLGVGHLQAR
Trigger: CCTTGCCTGCAGGTGTCCCACACCCAGAAGTGGCCAATCAGTGCCCAATAGTGCTGTCCTCCCCTTGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp CCCTTTCATGGCATCTGTCTGCCTCCAGGCACTCTGTaGGCCACACAAAGATCCCCTTCTGCCTGCAGTCCT +
Preference number: 3 (lower is better)
Translates to: PFHGICLPPGTL*ATQRSPSACSP
Trigger: AGGACTGCAGGCAGAAGGGGATCTTTGTGTGGCCCACAGAGTGCCTGGAGGCAGACAGATGCCATGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp TACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTaGGGTGTCTCCCTGTGCACTGTGGATGGTCAACGG +
Preference number: 3 (lower is better)
Translates to: YIPQLAKSNPDL*GVSLCTVDGQR
Trigger: CCGTTGACCATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTTGACTTGGCCAGCTGAGGGATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCAGGACAGACTGTCCTaGCCCTTGCCCTTTCCCTAC +
Preference number: 3 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVQDRLS*PLPFPY
Trigger: GTAGGGAAAGGGCAAGGGCAAGGACAGTCTGTCCTG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp GAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATaGTGTGCCTGTCACCCCCATTGGACAAGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: EPSSWWYPMSWE*CACHPHWTSWG
Trigger: TCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp TTATCCTCAGCTTCAGTTCTGTTCCCCAGGTGGGCCTaGCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCC +
Preference number: 3 (lower is better)
Translates to: LSSASVLFPRWA*QPSQLYQEPSS
Trigger: GGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCCCACCTGGGGAACAGAACTGAAGCTGAGGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGCCGAGATTGTGCCATaGCACTGTAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKAEIVP*HCSLGN
Trigger: GTTGCCCAGGCTACAGTGCAATGGCACAATCTCGGC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp CCAGGCCAGGGCAGTTATTCACGTCACCTGGAACTGTaGGTTGGCCTTGAACAGGGTGTCAGACTAGCCCAT +
Preference number: 3 (lower is better)
Translates to: PGQGSYSRHLEL*VGLEQGVRLAH
Trigger: ATGGGCTAGTCTGACACCCTGTTCAAGGCCAACTCACAGTTCCAGGTGACGTGAATAACTGCCCTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp CAGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTaGCCCACTCAAAACCATCCCAGCTCTTCACCCAGG +
Preference number: 3 (lower is better)
Translates to: QRDWASRYSLMA*PTQNHPSSSPR
Trigger: CCTGGGTGAAGAGCTGGGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp ATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTaGCTGTCACCCCCATTGGACAAGCTGGGGAACAGC +
Preference number: 3 (lower is better)
Translates to: ILLVVPNVMGMM*LSPPLDKLGNS
Trigger: GCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp GTGAATGGCCAGGCCAGGGCAGTTATTCACGTCACCTaGAACTGTGAGTTGGCCTTGAACAGGGTGTCAGAC +
Preference number: 3 (lower is better)
Translates to: VNGQARAVIHVT*NCELALNRVSD
Trigger: GTCTGACACCCTGTTCAAGGCCAACTCACAGTTCCAGGTGACGTGAATAACTGCCCTGGCCTGGCCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGAGAAATCTACTCCCCTaGGCCAGGACATGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKRNLLP*ARTCCC
Trigger: GCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCCACTACCCTCAGGTTaGCCTTGTCAGCCATGGATA +
Preference number: 3 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVPLPSG*PCQPWI
Trigger: TATCCATGGCTGACAAGGCAAACCTGAGGGTAGTGG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTaGGCTACAACAAGCTCTCCCTCAATGAGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: TCTSLWAKSQVA*ATTSSPSMRKV
Trigger: CACCTTCCTCATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp ATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTaGGGCTCTGATTCCTTTGAGGGTCCCCAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: IPHICSALQGDW*GSDSFEGPQKA
Trigger: TGCCTTCTGGGGACCCTCAAAGGAATCAGAGCCCCACCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGATAGAGGTGGAAGCTaGTTCCTGCCTCTCATTCAC +
Preference number: 3 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVDRGGS*FLPLIH
Trigger: GTGAATGAGAGGCAGGAACAAGCTTCCACCTCTATC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGACCTGGAACTGTGAGTaGGCCTTGAACAGGGTGTCA +
Preference number: 3 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKTWNCE*ALNRVS
Trigger: TGACACCCTGTTCAAGGCCAACTCACAGTTCCAGGT...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp CCTCACCTATGCCATCTCCATAAGCACCCTAGGCACTaGCTACGTGCACAAGTTTGTGGGCAAAGAGCCAAG +
Preference number: 3 (lower is better)
Translates to: PHLCHLHKHPRH*LRAQVCGQRAK
Trigger: CTTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGAGATGGCATAGGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp TGCCCTTGCCCTTTCCCTACACCCGAGGGTCCCATGTaGAGGTTCACGTCACATCTTCACCTATTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: CPCPFPTPEGPM*RFTSHLHLFFV
Trigger: AACAAAGAATAGGTGAAGATGTGACGTGAACCTGCACATGGGACCCTCGGGTGTAGGGAAAGGGCAAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp CCACTACCCTCAGGTTTGCCTTGTCAGCCATGGATATaGAACAGAAAGACTATGACTCGCGCACAGCTCTGC +
Preference number: 3 (lower is better)
Translates to: PLPSGLPCQPWI*NRKTMTRAQLC
Trigger: GCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTGAGGGTAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp GACTTCTCTGGCCAGTTTGCCTTCCACGTGAGTTTCTaGCTCTGCTATCCATCTGTCATGAGCCCAGTGCTA +
Preference number: 3 (lower is better)
Translates to: DFSGQFAFHVSF*LCYPSVMSPVL
Trigger: TAGCACTGGGCTCATGACAGATGGATAGCAGAGCCAGAAACTCACGTGGAAGGCAAACTGGCCAGAGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp TGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTaGTGGGGCTCTGATTCCTTTGAGGGTCCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: CIPHICSALQGD*WGSDSFEGPQK
Trigger: CTTCTGGGGACCCTCAAAGGAATCAGAGCCCCACCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAAGGGTCTCTCCTATGTaGCCTAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTRVSPM*PRLVSN
Trigger: GTTTGAGACCAGCCTAGGCAACATAGGAGAGACCCT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACACCCTCAGGTTTGCCTaGTCAGCCATGGATATGGAA +
Preference number: 3 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYTLRFA*SAMDME
Trigger: TTCCATATCCATGGCTGACAAGGCAAACCTGAGGGT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGAATTGTGCTTCACATaGCTGGCTCTTCTCCTTGGG +
Preference number: 3 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYELCFT*LALLLG
Trigger: CCCAAGGAGAAGAGCCAGCAATGTGAAGCACAATTC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp TCTGGCCAGTTTGCCTTCCACGTGAGTTTCTGGCTCTaGTATCCATCTGTCATGAGCCCAGTGCTAAGAAGA +
Preference number: 3 (lower is better)
Translates to: SGQFAFHVSFWL*YPSVMSPVLRR
Trigger: TCTTCTTAGCACTGGGCTCATGACAGATGGATAGCAGAGCCAGAAACTCACGTGGAAGGCAAACTGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGAAGATGATCATGATATaGCACAGAGGACCCAACACT +
Preference number: 3 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVKMIMI*HRGPNT
Trigger: AGTGTTGGGTCCTCTGTGCAATATCATGATCATCTT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGGGGAAAAGGAGGGTTaGGCTGTATGCCTAGCTTTC +
Preference number: 3 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLGEKEG*AVCLAF
Trigger: GAAAGCTAGGCATACAGCCAAACCCTCCTTTTCCCC...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp GACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTaGCAGGTGAGATGCTTTGCATATAGTACTTACTAT +
Preference number: 3 (lower is better)
Translates to: DKLGNSHRGTSF*QVRCFAYSTYY
Trigger: ATAGTAAGTACTATATGCAAAGCATCTCACCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp CCCACATGTTATGCTGACAATGTCAGTATAAGAGACTaGACCACCTCCGTCATCCCCACTCAGTACTGTTCC +
Preference number: 3 (lower is better)
Translates to: PTCYADNVSIRD*TTSVIPTQYCS
Trigger: GGAACAGTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGCATAACATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp CCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTaGTCAAACTGCTTCAAGATTACCAGGACTCCTACA +
Preference number: 3 (lower is better)
Translates to: PWMMLCSSTIWR*SNCFKITRTPT
Trigger: TGTAGGAGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp AGAGTAGCACATTCCATAACACTTCAGCAATACCCTTaGACTAAGCATCCATGGAGGAGGGTCACAGGGCAC +
Preference number: 3 (lower is better)
Translates to: RVAHSITLQQYP*TKHPWRRVTGH
Trigger: GTGCCCTGTGACCCTCCTCCATGGATGCTTAGTCCAAGGGTATTGCTGAAGTGTTATGGAATGTGCTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTGGTCAACCTGTTATTaGCTGCCTATAGTGGCGATG +
Preference number: 3 (lower is better)
Translates to: KLLCSCIPHICSALQGDWWSTCY*LPIVAM
Trigger: CATCGCCACTATAGGCAGCAAATAACAGGTTGACCA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTGCCTAAGCCCTTTCTaGCCAAGACTTTCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: KLLCSCIPHICSALQGDWCLSPF*PRLSKP
Trigger: TGGCTTTGAAAGTCTTGGCAAGAAAGGGCTTAGGCA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCAAGACTCTTGGTGGTTaGTATTTCCCCAGGAATCCC +
Preference number: 3 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVKTLGG*YFPRNP
Trigger: GGGATTCCTGGGGAAATACAAACCACCAAGAGTCTT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp CCATGGAGGAGGGTCACAGGGCACAGCTGGCATAGGTaGGTTCAATTAATGTCATGTGGGTATGATTTGTGT +
Preference number: 3 (lower is better)
Translates to: PWRRVTGHSWHR*VQLMSCGYDLC
Trigger: ACACAAATCATACCCACATGACATTAATTGAACTCACCTATGCCAGCTGTGCCCTGTGACCCTCCTCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp ATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTaGTTCAAGATTACCAGGACTCCTACACACTCTCTG +
Preference number: 3 (lower is better)
Translates to: MLCSSTIWRWSN*FKITRTPTHSL
Trigger: CAGAGAGTGTGTAGGAGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp GAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTaGAGAAATCTACTCCCCTTGGCCAGGACATGCTGC +
Preference number: 3 (lower is better)
Translates to: EVGMAIYMALVV*RNLLPLARTCC
Trigger: GCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp CCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTaGTGGAGGGACTCTAGCTACCATGCACATGTACAT +
Preference number: 3 (lower is better)
Translates to: PLPEETIMREIL*WRDSSYHAHVH
Trigger: ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp ACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTaGAGGTGGTCAAACTGCTTCAAGATTACCAGGACT +
Preference number: 3 (lower is better)
Translates to: TFPWMMLCSSTI*RWSNCFKITRT
Trigger: AGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCGTACAGCCTAATGGCTaGCCCCACTCAAAACCATCC +
Preference number: 3 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISVQPNG*PHSKPS
Trigger: GGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTAC...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCATTCCTGATCGAGGCTaGCAAAGTGAATCCTTTTGC +
Preference number: 3 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVIPDRG*QSESFC
Trigger: GCAAAAGGATTCACTTTGCAAGCCTCGATCAGGAAT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATCATGTGGGTATGATTaGTGTTCCAGAACAAGACTG +
Preference number: 3 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTSCGYD*CSRTRL
Trigger: CAGTCTTGTTCTGGAACACAAATCATACCCACATGA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTGCTGGCTCTTCTCCTaGGGGTCTCAGCTTAGATGT +
Preference number: 3 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISCWLFS*GSQLRC
Trigger: ACATCTAAGCTGAGACCCCAAGGAGAAGAGCCAGCA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCAGGAAGGCAATTAGGTaGAGACTCCTTAGACGAGTT +
Preference number: 3 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVRKAIR*RLLRRV
Trigger: AACTCGTCTAAGGAGTCTCAACCTAATTGCCTTCCT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp CCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATaGATACATGGGTTTCAGCAATGCCACGTAAGTCCC +
Preference number: 3 (lower is better)
Translates to: PGVAVSQQNGWE*IHGFQQCHVSP
Trigger: GGGACTTACGTGGCATTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp TCGCTTCTCAGAGATTTCCTGGGGCTGGGAGTCCTATaGATGAGAGATGAGAAGCAGAACTTCTGTAAATGG +
Preference number: 3 (lower is better)
Translates to: SLLRDFLGLGVL*MRDEKQNFCKW
Trigger: CCATTTACAGAAGTTCTGCTTCTCATCTCTCATTCATAGGACTCCCAGCCCCAGGAAATCTCTGAGAAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTaGAGGGACTCTAGCTACCATGCACATGTACATATC +
Preference number: 3 (lower is better)
Translates to: LPEETIMREILW*RDSSYHAHVHI
Trigger: GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CCA 72 bp CTGAAAGCATTGTGGTGTATGTGTGTGTACTTAGGATaGGGACAAGAGGAATGGGGGAGAGAGAATCTTAGG +
Preference number: 3 (lower is better)
Translates to: LKALWCMCVYLG*GQEEWGRENLR
Trigger: CCTAAGATTCTCTCTCCCCCATTCCTCTTGTCCCCATCCTAAGTACACACACATACACCACAATGCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACACAGTCATTTGTAAACTaGTTAAGAGTACAGCCTAAC +
Preference number: 3 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTQSFVN*LRVQPN
Trigger: GTTAGGCTGTACTCTTAACAAGTTTACAAATGACTG...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp TCATCCAGTCTGACACCAGTTCACAAAGAACACCTGTaGTTCCAGTCTGATCTAGGCAACTCTAGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: SSSLTPVHKEHL*FQSDLGNSSCF
Trigger: AAAGCAGCTAGAGTTGCCTAGATCAGACTGGAATCACAGGTGTTCTTTGTGAACTGGTGTCAGACTGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR GCA 72 bp GCAAATATATACAACCACCACTCTCCACGTCTCCTTTaGCTGATCATATCATTATTCCTCTCAGGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: ANIYNHHSPRLL*LIISLFLSGGA
Trigger: TGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGGTTGTATATATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp ATATATACAACCACCACTCTCCACGTCTCCTTTGCCTaGTCATATCATTATTCCTCTCAGGTGGGGCAACAT +
Preference number: 3 (lower is better)
Translates to: IYTTTTLHVSFA*SYHYSSQVGQH
Trigger: ATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGGTTGTATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR TCA 72 bp TTTCAGCAATGCCACGTAAGTCCCTACTCAGAGGACTaGCTGAAAGCATTGTGGTGTATGTGTGTGTACTTA +
Preference number: 3 (lower is better)
Translates to: FQQCHVSPYSED*LKALWCMCVYL
Trigger: TAAGTACACACACATACACCACAATGCTTTCAGTCAGTCCTCTGAGTAGGGACTTACGTGGCATTGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR-3UTR CAA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTCTCTCCACGTCTCCTTaGCCTGATCATATCATTATT +
Preference number: 3 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCLSTSP*PDHIII
Trigger: AATAATGATATGATCAGGCAAAGGAGACGTGGAGAG...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTCACCCTCGCCAACGGTaGGATCTGCCCCATCACAGG +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECHPRQR*DLPHHR
Trigger: CCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTG...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCCAACGGTGGGATCTaGCCCATCACAGGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECANGGI*PITGES
Trigger: ACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGC...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTATTAGCCAGACGTGGTaGCACGCGCCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECISQTW*HAPVVP
Trigger: TGGGACCACAGGCGCGTGCCACCACGTCTGGCTAAT...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTCATTTCGCCATGGCATaGTGTCCTCTCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECHFAMA*CPLQLP
Trigger: GGGCAGCTGGAGAGGACAGCATGCCATGGCGAAATG...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGGCTGCATTTCGCCATaGCATGCTGTCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECGCISP*HAVLSS
Trigger: GCTGGAGAGGACAGCATGCCATGGCGAAATGCAGCC...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTTGGGATCCAGGTGTGTaGGCAGCAACATTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECWDPGV*AATLCS
Trigger: GGAGCACAATGTTGCTGCTCACACACCTGGATCCCA...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGGGCACCTCAAGCCCTaGATGGGTCAGCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVGHLKP*MGQQLP
Trigger: GGGGAGCTGCTGACCCATTCAGGGCTTGAGGTGCCC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTACTGTGAGTTGGCCTTaGACAGGGTGTCAGACTAGC +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECTVSWP*TGCQTS
Trigger: GCTAGTCTGACACCCTGTTCAAGGCCAACTCACAGT...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGTACCCTGCCTCAAATaGGCACTTACCACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECVPCLK*ALTTGR
Trigger: CCTACCTGTGGTAAGTGCCCATTTGAGGCAGGGTAC...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTTCTCCCTGTGCACTGTaGATGGTCAACGGTGAGATG +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECSPCAL*MVNGEM
Trigger: CATCTCACCGTTGACCATCCACAGTGCACAGGGAGA...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTTTCGAGTCAGGAAAATaGACGTGGGAGTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECFESGK*TWESGM
Trigger: CATCCCTGACTCCCACGTTCATTTTCCTGACTCGAA...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTATAAAGAGATGTCTTTaGGAGGCCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECIKRCL*EAEAGG
Trigger: TCCACCTGCCTCGGCCTCCCAAAGACATCTCTTTAT...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGGCGGAGCTTGCAGTTaGGCCGAGATCCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKGGACS*AEILPL
Trigger: CAGTGGCAGGATCTCGGCTCAACTGCAAGCTCCGCC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTCACTACCCTCAGGTTTaGCTTGTCAGCCATGGATAT +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECHYPQV*LVSHGY
Trigger: ATATCCATGGCTGACAAGGCAAACCTGAGGGTAGTG...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTAGGAGGGAACCCCTCTaGCCTATAGAAGACAGAATT +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECRREPL*PIEDRI
Trigger: AATTCTGTCTTCTATAGGGCAGAGGGGTTCCCTCCT...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACAGGAGCCATCCTCCTaGTGGTACCCAATGTCATGG +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPIQEPSS*WYPMSW
Trigger: CCATGACATTGGGTACCACCAGGAGGATGGCTCCTG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGTTCTGTTCCCCAGGTaGGCCTGCCAGCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVVLFPR*ACQPSQ
Trigger: CTGACTTGGCTGGCAGGCCCACCTGGGGAACAGAAC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGTTATTCACGTCACCTaGAACTGTGAGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECVIHVT*NCELAL
Trigger: CAAGGCCAACTCACAGTTCCAGGTGACGTGAATAAC...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGCTCTCCAGGGAGACTaGTGGGGCTCTGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPIALQGD*WGSDSF
Trigger: AAAGGAATCAGAGCCCCACCAGTCTCCCTGGAGAGC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGAGGCTCGGGCATTTCTaGGAGCAACAGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVRLGHF*EQQAGG
Trigger: CCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGTCCCCAGAAGGCACATaGGGCACAGCAGGGACCCAC +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVSPEGT*GTAGTH
Trigger: GTGGGTCCCTGCTGTGCCTCATGTGCCTTCTGGGGA...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGTGGGGTGTCTCCCTGTaGACTGTGGATGGTCAACGG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVWGVSL*TVDGQR
Trigger: CCGTTGACCATCCACAGTGCACAGGGAGACACCCCA...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCCCCATTGGACAAGCTaGGGAACAGCCATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVPHWTS*GTAIGG
Trigger: TCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGGGG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTGGGCAGCAACACCCTaGAGCCAATCACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKWAATP*SQSQPL
Trigger: GAGGGGCTGTGATTGGCTCCAGGGTGTTGCTGCCCA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAGGCAGGAGAATGGTATaGACCCGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTGRRMV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCATACCATTCTCCTGCC...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGCCTGCAGTCCTGTGTaGAGCCCCTCACCTATGCCA +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYACSPV*SPSPMP
Trigger: TGGCATAGGTGAGGGGCTTCACACAGGACTGCAGGC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCCCACCTTCTCTGGCTaGCCAATACCCTCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKPTFSG*PIPSTG
Trigger: CCCAGTTGAGGGTATTGGGCAGCCAGAGAAGGTGGG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGACTCGCGCACAGCTCTaGATGTTGCTGCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVTRAQL*MLLQLK
Trigger: CTTCAGCTGCAGCAACATGCAGAGCTGTGCGCGAGT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCCCGAGGGTCCCATGTaGAGGTTCACGTCACATCTT +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVPEGPM*RFTSHL
Trigger: AAGATGTGACGTGAACCTGCACATGGGACCCTCGGG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGCTGTCCTCTCCAGCTaGCCCAGTGGCTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYAVLSS*PSGSLT
Trigger: GGTTAGAGAGCCACTGGGGCAGCTGGAGAGGACAGC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAAGGCATGAACCATCATaGTGGCCAATGGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPIRHEPS*WPMGWS
Trigger: ACTCCATCCCATTGGCCAGCATGATGGTTCATGCCT...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAACAAAGATCCCCTTCTaGCTGCAGTCCTGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPITKIPF*LQSCVK
Trigger: CTTCACACAGGACTGCAGGCAGAAGGGGATCTTTGT...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGCTACACTGCTTCAGTaGGGACCAAGCAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPIATLLQ*GPSSHL
Trigger: CAAATGACTGCTTGGTCCCCACTGAAGCAGTGTAGC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTCCACCAAAAATACTATaGAGAGCTACACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECPPKIL*RATLLQ
Trigger: CTGAAGCAGTGTAGCTCTCCATAGTATTTTTGGTGG...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACCTCCAGCTGCCCCAGTaGCTCTCTAACCCCACTACC +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYLQLPQ*LSNPTT
Trigger: GGTAGTGGGGTTAGAGAGCCACTGGGGCAGCTGGAG...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAAGCCTCCCGAGTAGCTaGCATACACCACCATGCCCG +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTSLPSS*HTPPCP
Trigger: CGGGCATGGTGGTGTATGCCAGCTACTCGGGAGGCT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 72 bp CCAGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTaGCCCCACTCAAAACCATCCCAGCTCTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: PERLGFKVQPNG*PHSKPSQLFTQ
Trigger: CTGGGTGAAGAGCTGGGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCACCCGTATCATCTCTaGAGAGTGCCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKHPYHL*RVPGCC
Trigger: ACAGCAGCCTGGCACTCTTCAGAGATGATACGGGTG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGAGGCAGAGTTTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVRQSLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAAACTCTGCCT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATATTAGAAAGCATGGTATaGGCACAGGTCATGGACAGC +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPILESMV*AQVMDS
Trigger: GCTGTCCATGACCTGTGCTCATACCATGCTTTCTAA...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACAGCTAGACTATGACTaGGTGCTGCAGGGTACAAAA +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPIQLDYD*VLQGTK
Trigger: TTTTGTACCCTGCAGCACTCAGTCATAGTCTAGCTG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGAGAGGAAAGCCTCTTaGCAAGACCTGAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPIERKAS*QDLSSE
Trigger: TTCTGAACTCAGGTCTTGTCAAGAGGCTTTCCTCTC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGTCCACTAGATCCTTCTaGCCCTTCCCTCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVSTRSF*PFPLSS
Trigger: GGATGACAGAGGGAAGGGTCAGAAGGATCTAGTGGA...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGTGGATGGTCAACGGTaGGATGCTGGGCAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKVDGQR*DAGQEE
Trigger: TTCCTCTTGCCCAGCATCTCACCGTTGACCATCCAC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCTAGGCAACTCTAGCTaGTTTCCCACTACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVLGNSS*FPTTLR
Trigger: CCTGAGGGTAGTGGGAAAGCAGCTAGAGTTGCCTAG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGACACCCTCAGCCTCATaGATTCCTGCGGCATGTATG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVTPSAS*IPAACM
Trigger: CATACATGCCGCAGGAATGCATGAGGCTGAGGGTGT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACATGGGTTTCAGCAATaGCACGTAAGTCCCTACTCA +
Preference number: 4 (lower is better)
Translates to: KARAFLGATGRREPLCPIHGFQQ*HVSPYS
Trigger: TGAGTAGGGACTTACGTGGCATTGCTGAAACCCATG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTTGGCATACACCACCATaGCCGACTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECWHTPP*PTNFCI
Trigger: AATACAAAAATTAGTCGGGCATGGTGGTGTATGCCA...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCTGGGGCTTTCTCGTTaGCCAACATGGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVLGLSR*PTWCTT
Trigger: AGTGGTACACCATGTTGGCCAACGAGAAAGCCCCAG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGCCTGTCACCCCCATTaGACAAGCTGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWACHPH*TSWGTA
Trigger: GGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACAATCAGGCAGTGTCATaGCAGCCACCCTCGCCAACG +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYNQAVS*QPPSPT
Trigger: CGTTGGCGAGGGTGGCTGCCATGACACTGCCTGATT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGGCCACTTCTGGGTGTaGGACACCTGCAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLGHFWV*DTCRQG
Trigger: CCCTTGCCTGCAGGTGTCCCACACCCAGAAGTGGCC...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCACTCATGTCCAGGTaGCAGCCTACATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVPLMSR*QPTSLS
Trigger: GCTGAGGGATGTAGGCTGCCACCTGGACATGAGTGG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACTCTGTCTGTAGCGTGTaGACCACAGAGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYSVCSV*TTETWL
Trigger: GAGCCAGGTCTCTGTGGTTCACACGCTACAGACAGA...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAGGCTGGCCAAAGGCGTaGTTAGGGACTCCAGTAATG +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTGWPKA*LGTPVM
Trigger: CATTACTGGAGTCCCTAATCACGCCTTTGGCCAGCC...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGGTTAGACCCACGGCGTaGAGGGGCAGAAATTCGGGT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWVRPTA*RGRNSG
Trigger: ACCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAAC...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGAGTGGGAGGATCGCTTaGGCCTGGGAGGTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSGRIA*AWEVKA
Trigger: AGCTTTGACCTCCCAGGCTCAAGCGATCCTCCCACT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGTCCGTGGCTCCAGAGTaGGTCCCAGCTGCATTTCTC +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWSVAPE*VPAAFL
Trigger: GAGAAATGCAGCTGGGACTCACTCTGGAGCCACGGA...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACCAACCTGAGGCACTGTaGTCGGAAGTTAGACCCACG +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYQPEAL*SEVRPT
Trigger: CGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGTTG...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGAGGCTGAGGCAGAAGTaGTTGAACCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVRLRQK*LNLGGR
Trigger: TCTGCCTCCCAGGTTCAAGCACTTCTGCCTCAGCCT...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCAGGTAAGAAAACACTaGTCAGGGCCGAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKQVRKH*SGPREQ
Trigger: CTGTTCCCTCGGCCCTGAGCAGTGTTTTCTTACCTG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGTCACCCGGGCTGGAGTaGAATGGTGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVSPGLE*NGAISA
Trigger: AGCTGAGATTGCACCATTGCACTCCAGCCCGGGTGA...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCAACTCCCAATCGTTTaGCTCCCCAGCGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWQLPIV*LPSGTS
Trigger: GCTTGTGCCGCTGGGGAGCCAAACGATTGGGAGTTG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGTGGACTAAGCATCCATaGAGGAGGGTCACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVWTKHP*RRVTGH
Trigger: GTGCCCTGTGACCCTCCTCCATGGATGCTTAGTCCA...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACAAAATTAGCCAGACGTaGTGGCACGCGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYKISQT*WHAPVV
Trigger: GACCACAGGCGCGTGCCACCACGTCTGGCTAATTTT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGAAGGGCAGTAGGGGTTaGGGGCTTCAGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLKGSRG*GLQLRP
Trigger: GGGTCTCAGCTGAAGCCCCCAACCCCTACTGCCCTT...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAACTTGGAGGCTGAAGTaGGAGGATCGCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTTWRLK*EDRLSL
Trigger: CAGGCTCAAGCGATCCTCCCACTTCAGCCTCCAAGT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAGGGCAAAGAGCCAAGTaGCCTGCGCTACAACAAGCT +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTGQRAK*PALQQA
Trigger: AGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCC...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTCAACGGTGAGATGCTaGGCAAGAGGAAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSTVRC*ARGRGG
Trigger: GCCTCCCCTTCCTCTTGCCCAGCATCTCACCGTTGA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCTGCGCTGGGCATAGGTaGACACCCAGGAACGATCAT +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVCAGHR*TPRNDH
Trigger: ATGATCGTTCCTGGGTGTTCACCTATGCCCAGCGCA...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAGGAACAGAAAGACTATaGCTCGCGCACAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTGTERL*LAHSSA
Trigger: TGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCC...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATTCCTGCGGCATGTATaGCTTCTCTGGCCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTFLRHV*LLWPVC
Trigger: GCAAACTGGCCAGAGAAGTCATACATGCCGCAGGAA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGAGTGTGCTGAGTGCTaGAGCAGTGCGCAACACCCT +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLECAEC*SSAQHP
Trigger: AGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTC...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGTGAGGAAAAGAGGCTaGGTCTCTCCCCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYVRKRG*VSPLVL
Trigger: CAGAACAAGGGGAGAGACTCAGCCTCTTTTCCTCAC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGAGGGGGACCAGCTTCTaGCAGGTGAGATGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWRGTSF*QVRCFA
Trigger: TGCAAAGCATCTCACCTGGCAGAAGCTGGTCCCCCT...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACTACTTAGCCCCTGGCTaGATTTCGCCATGGCATGCT +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYYLAPG*ISPWHA
Trigger: AGCATGCCATGGCGAAATGCAGCCAGGGGCTAAGTA...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTATCTGGGACCTaGCTCATCCCATTCCCATCT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVPVSGT*LIPFPS
Trigger: AGATGGGAATGGGATGAGGCAGGTCCCAGATACAGG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACGTCAGTATAAGAGACTaGACCACCTCCGTCATCCCC +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYVSIRD*TTSVIP
Trigger: GGGGATGACGGAGGTGGTGCAGTCTCTTATACTGAC...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGGAAGCCCCTCACCTATaGCATCTCCATAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVEAPHL*HLHKHP
Trigger: AGGGTGCTTATGGAGATGGCATAGGTGAGGGGCTTC...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTGGTCAACGGTGAGATaGTGGGCAAGAGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWWSTVR*WARGRG
Trigger: TCCCCTTCCTCTTGCCCAGCATCTCACCGTTGACCA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCTCTCTGGGCCTCTGTaGAGGCAACTCCCAATCGTT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWLSGPL*RQLPIV
Trigger: AACGATTGGGAGTTGCCTCCACAGAGGCCCAGAGAG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACTCAAGGCCACCTTGGTaGGCTCCAATCCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHSRPPW*APIPPS
Trigger: GCTTGGTGGGATTGGAGCCCACCAAGGTGGCCTTGA...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGAAAGGCAGGCACCACTaGACCCCGGAAATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWKGRHH*TPEICL
Trigger: CAGACAGATTTCCGGGGTCCAGTGGTGCCTGCCTTT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGGAAATCTACTCCCCTTaGCCAGGACATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVEIYSP*PGHAAA
Trigger: AGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTC...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATTGCTACTTAGCCCCTaGCTGCATTTCGCCATGGCA +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTLLLSP*LHFAMA
Trigger: TGCCATGGCGAAATGCAGCCAGGGGCTAAGTAGCAA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGCACTGCACTCCAGCCTaGGTGACAAGGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWHCTPA*VTRVTK
Trigger: CTTTGTCACCCTTGTCACCCAGGCTGGAGTGCAGTG...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGATGGGGTGTAAGGAATaGGGATGGAGATCAGGGATA +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVMGCKE*GWRSGI
Trigger: TATCCCTGATCTCCATCCCCATTCCTTACACCCCAT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGCTAAGGCAGGAGAATaGTATGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLAKAGE*YEPGRR
Trigger: CCGCCTCCCGGGTTCATACCATTCTCCTGCCTTAGC...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGACGTGCACAAGTTTGTaGGCAAAGAGCCAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVTCTSL*AKSQVA
Trigger: GGCCACTTGGCTCTTTGCCCACAAACTTGTGCACGT...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGCCTCCAGGCACTCTGTaGGCCACACAAAGATCCCCT +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLPPGTL*ATQRSP
Trigger: AGGGGATCTTTGTGTGGCCCACAGAGTGCCTGGAGG...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCCTGTGCACTGTGGATaGTCAACGGTGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWPVHCG*STVRCW
Trigger: CCAGCATCTCACCGTTGACCATCCACAGTGCACAGG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGTTCTCAGAGATTTCCTaGGGCTGGGAGTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVFSEIS*GWESYE
Trigger: TTCATAGGACTCCCAGCCCCAGGAAATCTCTGAGAA...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTCCTCTTCCTCTCCCTaGAGAAACCATCATGAGAGA +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKSSSSP*RNHHER
Trigger: TCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGCACAAAGAACACCTGTaGTTCCAGTCTGATCTAGGC +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKHKEHL*FQSDLG
Trigger: GCCTAGATCAGACTGGAATCACAGGTGTTCTTTGTG...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGAGGCAGAGGTTGCAGTaGGCCAAGACCGCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQRQRLQ*AKTARH
Trigger: GTGGCGCGCGGTCTTGGCTCACTGCAACCTCTGCCT...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAACAACTATGACAACCTaGGGCACTGTGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTTTMTT*GTVLGS
Trigger: ACTTCCGAGCACAGTGCCTCAGGTTGTCATAGTTGT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACCATGATGGCTGCCCTTaGTCTCTACTTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYHDGCP*SLLPGK
Trigger: CTTACCTGGAAGTAGAGATCAAGGGCAGCCATCATG...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACAAAGGGCTGATGTCCTaGAGAGAAATGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYKGLMS*REMLSP
Trigger: AGGGGAGAGCATTTCTCTTCAGGACATCAGCCCTTT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCATGAGAGAGGCAGTGTaGTGGTTTGTGCCTAAGCCC +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVMREAV*WFVPKP
Trigger: GGGCTTAGGCACAAACCATCACACTGCCTCTCTCAT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCCGTGGGAGTCAGGGATaGGGGTTTGGATTGAGAATG +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVRGSQG*GFGLRM
Trigger: CATTCTCAATCCAAACCCTCATCCCTGACTCCCACG...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACTCTCCCCTTGTTCTGTaGTGGCTCCATCTACAAACC +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYSPLVL*WLHLQT
Trigger: GGTTTGTAGATGGAGCCATCACAGAACAAGGGGAGA...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGCGTCACCTGGAACTGTaGGTTGGCCTTGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLRHLEL*VGLEQG
Trigger: ACCCTGTTCAAGGCCAACTCACAGTTCCAGGTGACG...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGAGCACTATTGGGCACTaGTTGGCCACTTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWSTIGH*LATSGC
Trigger: ACACCCAGAAGTGGCCAATCAGTGCCCAATAGTGCT...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGTGGAGGTGGTCAAACTaGTTCAAGATTACCAGGACT +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVWRWSN*FKITRT
Trigger: AGTCCTGGTAATCTTGAAGCAGTTTGACCACCTCCA...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCCCTGGATGATGCTGTaGAGTTCAACCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWPWMML*SSTIWR
Trigger: CCTCCAGATGGTTGAACTGCACAGCATCATCCAGGG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGGTCTCTCCTATGTTaGCTAGGCTGGTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWGSLLC*LGWSQT
Trigger: GGTTTGAGACCAGCCTAGGCAACATAGGAGAGACCC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACCATGGTCAATGCTGGTaGCATTGTTGTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYHGQCW*HCCQLP
Trigger: AGGGAGCTGACAACAATGGCACCAGCATTGACCATG...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAAGAGCCAAGTGGCCTaGGCTACAACAAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHKSQVA*ATTSSP
Trigger: GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTT...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACTTCATGGCATCTGTCTaGCTCCAGGCACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHFMASV*LQALCG
Trigger: CCCACAGAGTGCCTGGAGGCAGACAGATGCCATGAA...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACTCTCGTTGGCCAACATaGTGTACCACTTGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHSRWPT*CTTCAG
Trigger: CCCAGCGCAAGTGGTACACCATGTTGGCCAACGAGA...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTGCAGTTCAACCATCTaGAGGTGGTCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKCSSTI*RWSNCF
Trigger: GAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGGGGGCAACATTCCCCTaGATGATGCTGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWGATFP*MMLCSS
Trigger: TGAACTGCACAGCATCATCCAGGGGAATGTTGCCCC...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCATCATGCTGGCCAATaGGATGGAGTAAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVHHAGQ*DGVKLQ
Trigger: CTGGAGCTTTACTCCATCCCATTGGCCAGCATGATG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCTATTGGGCACTGATTaGCCACTTCTGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWLLGTD*PLLGVG
Trigger: TCCCACACCCAGAAGTGGCCAATCAGTGCCCAATAG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCCCCATGGTCAATGCTaGTGCCATTGTTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWPHGQC*CHCCQL
Trigger: GAGCTGACAACAATGGCACCAGCATTGACCATGGGG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTCCCCCATAACCCCATaGTCAATGCTGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSPITP*SMLVPL
Trigger: CAATGGCACCAGCATTGACCATGGGGTTATGGGGGA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 72 bp GGCTGTCAGGGAGGCTTTGTTCAGTGGCTAAGACTCTaGGTGGTTTGTATTTCCCCAGGAATCCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: GCQGGFVQWLRL*VVCISPGIPHN
Trigger: GTTATGGGGGATTCCTGGGGAAATACAAACCACCAAGAGTCTTAGCCACTGAACAAAGCCTCCCTGACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCAACATTCCCCTGGATaGTGCTGTGCAGTTCAACCA +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWQHSPG*CCAVQP
Trigger: TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCTTTGCAGCTAGACTATaGCTGAGTGCTGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVFAARL*LSAAGY
Trigger: GTACCCTGCAGCACTCAGTCATAGTCTAGCTGCAAA...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGAAACTCATCCAGTCTaGCACCAGTTCACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKETHPV*HQFTKN
Trigger: GTTCTTTGTGAACTGGTGTCAGACTGGATGAGTTTC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAAGGTGTTGCAGCTCCTaGATTGTGCTTCACATTGCT +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTRCCSS*IVLHIA
Trigger: AGCAATGTGAAGCACAATTCAGGAGCTGCAACACCT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGAGTTTGCCTTCCACGTaGGTTTCTGGCTCTGCTATC +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWSLPST*VSGSAI
Trigger: GATAGCAGAGCCAGAAACTCACGTGGAAGGCAAACT...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGTGTGGAGGTCACTTGTaGATCAGGCAGTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLCGGHL*IRQCHG
Trigger: GCCATGACACTGCCTGATTCACAAGTGACCTCCACA...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACCTTCAGCTGAGACCCTaGCAGTGTGAAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHLQLRP*QCERAD
Trigger: ATCAGCCCTTTCACACTGTCAGGGTCTCAGCTGAAG...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCCCCTACTCAGAGGACTaGCTGAAAGCATTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVPYSED*LKALWC
Trigger: ACACCACAATGCTTTCAGTCAGTCCTCTGAGTAGGG...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACTCCTGGCTAGCACGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHSWLAR*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCGTGCTAGCCAGGA...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACTGTGGATCGCATCTTTaGGGATGTCAAAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYCGSHL*GCQRAH
Trigger: GTGAGCTCTTTGACATCCTCAAAGATGCGATCCACA...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACGGACATGTCCACATCTaGCACTCCTATCCGGAACTG +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHGHVHI*HSYPEL
Trigger: CAGTTCCGGATAGGAGTGGCAGATGTGGACATGTCC...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCAAAAGGCAGAGTTTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVPKGRV*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAAACTCTGCCTTTTGG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTCCTGATCGAGGCTTaGAAAGTGAATCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKFLIEA*KVNPFA
Trigger: GGCAAAAGGATTCACTTTGCAAGCCTCGATCAGGAA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGCAGTGGCTAAGTGTCTaGACCAAAGGGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWQWLSV*TKGFKT
Trigger: GGTCTTGAACCCTTTGGTGCAGACACTTAGCCACTG...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGACTGAGCCGAGATTGTaGCATTGCACTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLTEPRL*HCTVAW
Trigger: CCAGGCTACAGTGCAATGGCACAATCTCGGCTCAGT...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGCTCTCTTCCTTGCAGTaGTTTCCTAAGGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLLSSLQ*FPKGVD
Trigger: GTCCACCCCCTTAGGAAAGCACTGCAAGGAAGAGAG...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGAGGGGATCGGAATTATaGCATCGGCTATTATCTCAA +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVRGSEL*HRLLSQ
Trigger: TTGAGATAATAGCCGATGGCATAATTCCGATCCCCT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGAAATTGGCAGTAGTTaGTGGGTGGGGAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWEIGSS*WVGKRR
Trigger: CCTCCTTTTCCCCACCCACCAACTACTGCCAATTTC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAATGAGAGAGATACTCTaGTGGAGGGACTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTMREIL*WRDSSY
Trigger: GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCAT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAAAAGTGGAGGAGGGTaGGCACAGCTTCTCCACCTA +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHKSGGG*AQLLHL
Trigger: TAGGTGGAGAAGCTGTGCCCACCCTCCTCCACTTTT...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGGTAATCCGAGCTACTTaGAGGCTGAAGTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWVIRAT*RLKWED
Trigger: ATCCTCCCACTTCAGCCTCCAAGTAGCTCGGATTAC...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCTACAAACCTGTATCTaGGACCTGCCTCATCCCATT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVLQTCI*DLPHPI
Trigger: AATGGGATGAGGCAGGTCCCAGATACAGGTTTGTAG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGGGAGGCTTTGTTCAGTaGCTAAGACTCTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVGGFVQ*LRLLVV
Trigger: AACCACCAAGAGTCTTAGCCACTGAACAAAGCCTCC...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATGTCAAAGAGCTCACTaGAGGCAAAGTGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTCQRAH*RQSESQ
Trigger: CTGACTCTCACTTTGCCTCCAGTGAGCTCTTTGACA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGAGTTCACGGGCCATGTaGATCGCATCTTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSSRAM*IASLRM
Trigger: CATCCTCAAAGATGCGATCCACATGGCCCGTGAACT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGAAGGTCTGTGGCACTaGGCTACTGGGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCEGLWH*ATGEGG
Trigger: CCCTCCTTCCCCAGTAGCTCAGTGCCACAGACCTTC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGAGGCCAAGGTGGGCTaGTCACATGAGGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCEAKVG*SHEARS
Trigger: ACTCCTGGCCTCATGTGATCAGCCCACCTTGGCCTC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCACCACAGGTAGGCAGTaGGTGATATTTCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVTTGRQ*VIFLEG
Trigger: TCCTTCCAGAAATATCACTCACTGCCTACCTGTGGT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGAATGTCATGTGGGTATaGTTTGTGTTCCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVNVMWV*FVFQNK
Trigger: CTTGTTCTGGAACACAAATCATACCCACATGACATT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTCCTGGCTAACACGGTaGAACCTGGTCTCTATTGAA +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSWLTR*NLVSIE
Trigger: TTCAATAGAGACCAGGTTTCACCGTGTTAGCCAGGA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGGGGCTAGTCAACCTGTaGGGTATTAATAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVGLVNL*GINRAS
Trigger: AGAAGCTCTATTAATACCTCACAGGTTGACTAGCCC...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACACACATGAGTAAGCAATaGGTCTGGGTGAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTHMSKQ*VWVRKR
Trigger: TCTTTTCCTCACCCAGACTCATTGCTTACTCATGTG...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGAAGCACCCTAGGCACTaGCTACGTGCACAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLKHPRH*LRAQVC
Trigger: ACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTT...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCCTAGAAAGGTAAACTaGTTTGCCAAAGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVPRKVN*FAKGNR
Trigger: TCTGTTACCTTTGGCAAATCAGTTTACCTTTCTAGG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCAAGCGCAAAGAACGTaGAAAAAGCAGCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWQAQRT*KKQRHL
Trigger: AAGATGGCGCTGCTTTTTGCACGTTCTTTGCGCTTG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCACTCCTATCCGGAACTaGTGGGAGCGCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISTPIRN*WERFTV
Trigger: GACAGTGAAGCGCTCCCAGCAGTTCCGGATAGGAGT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGGATCATCAACACCAATaGAGCTATCCCGGGACATGT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWDHQHQ*SYPGTC
Trigger: ACATGTCCCGGGATAGCTGCATTGGTGTTGATGATC...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACAGGTTAAGTGTATTCTaGTGCCAAGGGAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYRLSVF*CQGKHR
Trigger: CCTATGCTTCCCTTGGCAGCAGAATACACTTAACCT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGGCAGCTCCTGAATTGTaGTTCACATTGCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWAAPEL*FTLLAL
Trigger: AAGAGCCAGCAATGTGAAGCACAATTCAGGAGCTGC...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACCTTCTCTGGCCAGTTTaGCTTCCACGTGAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHLLWPV*LPREFL
Trigger: CAGAAACTCACGTGGAAGGCAAACTGGCCAGAGAAG...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCAGTGTGATGGTTTGTaGCTAAGCCCTTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWQCDGL*LSPFLP
Trigger: TGGCAAGAAAGGGCTTAGGCACAAACCATCACACTG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCTATCTCTACAGGATTaGGGATACACAAAGATATGG +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVLSLQD*GYTKIW
Trigger: CCATATCTTTGTGTATCCGCAATCCTGTAGAGATAG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTCAACCATCTGGAGGTaGTCAAACTGCTTCAAGATT +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKSTIWR*SNCFKI
Trigger: AATCTTGAAGCAGTTTGACCACCTCCAGATGGTTGA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGTGTCAGCCATGGATATaGAACAGAAAGACTATGACT +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVCQPWI*NRKTMT
Trigger: AGTCATAGTCTTTCTGTTCCATATCCATGGCTGACA...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGCTTCAGCAATACCCTTaGACTAAGCATCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWLQQYP*TKHPWR
Trigger: CCTCCATGGATGCTTAGTCCAAGGGTATTGCTGAAG...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGTTTATTTTCTGATTTaGGGCACACCCACTTTATCC +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVVYFLI*GTPTLS
Trigger: GGATAAAGTGGGTGTGCCCCAAATCAGAAAATAAAC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACTGTGCTTCACATTGCTaGCTCTTCTCCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHCASHC*LFSLGS
Trigger: AGACCCCAAGGAGAAGAGCCAGCAATGTGAAGCACA...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACTGTGTGTACTTAGGATaGGGACAAGAGGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHCVYLG*GQEEWG
Trigger: CCCCCATTCCTCTTGTCCCCATCCTAAGTACACACA...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGAAAGAGAGGAGCCAATaGAAGTGCGGTGTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVKERSQ*KCGVFR
Trigger: TCTGAAAACACCGCACTTCCATTGGCTCCTCTCTTT...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 72 bp CCCAGGCATTCCGAAAGAAGTTTGTCATTCCTGATTTaGAGGAGTTCACGGGCCATGTGGATCGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: PRHSERSLSFLI*RSSRAMWIASL
Trigger: CAAAGATGCGATCCACATGGCCCGTGAACTCCTCAAAATCAGGAATGACAAACTTCTTTCGGAATGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGCTGAAGAAACCATCATaGGAGAGATACTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWLKKPS*ERYSGG
Trigger: TCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAG...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGCAAGCAGTCATTTGGTaGCTTAGGCTAGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWQAVIW*LRLVLS
Trigger: AGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTG...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCGCTCAAGAAAAAGCATaGGCTGGCCACACATGTAAT +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVAQEKA*AGHTCN
Trigger: ATTACATGTGTGGCCAGCTCATGCTTTTTCTTGAGC...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCACGTCTCCTTTGCCTaGTCATATCATTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVHVSFA*SYHYSS
Trigger: AGAGGAATAATGATATGATCAGGCAAAGGAGACGTG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGTCGAGGCTTGCAAAGTaGATCCTTTTGCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLSRLAK*ILLPRT
Trigger: TGTCCTTGGCAAAAGGATTCACTTTGCAAGCCTCGA...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGCCAGCTTCTGCCAGGTaGGATGCTTTGCATATAGTA +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLPASAR*DALHIV
Trigger: TACTATATGCAAAGCATCTCACCTGGCAGAAGCTGG...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAACAAGCCAAAAGGTTaGGGTGGATTGTGGTCATGC +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHNKPKG*GGLWSC
Trigger: GCATGACCACAATCCACCTCAACCTTTTGGCTTGTT...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGAAGGCAATTAGGTTaGGACTCCTTAGACGAGTTT +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWGRQLG*DSLDEF
Trigger: AAACTCGTCTAAGGAGTCTCAACCTAATTGCCTTCC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTTGTTGTCAGCTCCCTaGTCAAGGTCAGTGCCACCT +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISLLSAP*SRSVPP
Trigger: AGGTGGCACTGACCTTGATCAGGGAGCTGACAACAA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGTCTAAAAGATTCTCTTaGCCCTCAACCTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVSKRFS*PSTSTL
Trigger: CAGAGTTGAGGTTGAGGGTCAAGAGAATCTTTTAGA...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTCTCCACGTCTCCTTTaGCTGATCATATCATTATTC +
Preference number: 4 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKSPRLL*LIISLF
Trigger: GAATAATGATATGATCAGGCAAAGGAGACGTGGAGA...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCGTCATGGGAATGATGTaGCTGTCACCCCCATTGGAC +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISVMGMM*LSPPLD
Trigger: GTCCAATGGGGGTGACAGGCACATCATTCCCATGAC...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGTTCCCCAGGTGGGCCTaGCAGCCAAGTCAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQFPRWA*QPSQLY
Trigger: ATACAGCTGACTTGGCTGGCAGGCCCACCTGGGGAA...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCCCGAGATTGTGCCATTaGACTGTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISPRLCH*TVAWAT
Trigger: TGTTGCCCAGGCTACAGTGCAATGGCACAATCTCGG...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGTGAGTTTCTGGCTCTaGTATCCATCTGTCATGAGC +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLVSFWL*YPSVMS
Trigger: GCTCATGACAGATGGATAGCAGAGCCAGAAACTCAC...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGACTGTCCTTGCCCTTaGCCTTTCCCTACACCCGAG +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCDCPCP*PFPTPE
Trigger: CTCGGGTGTAGGGAAAGGGCAAGGGCAAGGACAGTC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGGACCAAGGGCCAAATaGCAGAGACAAGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCGPRAK*QRQGED
Trigger: GTCCTCCCCTTGTCTCTGGCATTTGGCCCTTGGTCC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCCTGATCAAGGTCAGTaGCACCTTAACCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWPDQGQ*HLNLLI
Trigger: TATCAGAAGGTTAAGGTGGCACTGACCTTGATCAGG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTCAGCCCCACCTTCTCTaGCTGCCCAATACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCQPHLL*LPNTLN
Trigger: GTTGAGGGTATTGGGCAGCCAGAGAAGGTGGGGCTG...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCATGATTATGACAGACTaGCTGGGTGTCAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVMIMTD*LGVRGT
Trigger: TGTACCTCTGACACCCAGCCAGTCTGTCATAATCAT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGAGAGAGATACTCTGGTaGAGGGACTCTAGCTACCAT +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLREILW*RDSSYH
Trigger: ATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATTGCCTTGTCAGCCATaGATATGGAACAGAAAGACT +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTLPCQP*IWNRKT
Trigger: AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCGAGCCATCCTCCTGGTaGTACCCAATGTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISEPSSW*YPMSWE
Trigger: TTCCCATGACATTGGGTACCACCAGGAGGATGGCTC...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGTTCCACGTGAGTTTCTaGCTCTGCTATCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLFHVSF*LCYPSV
Trigger: GACAGATGGATAGCAGAGCCAGAAACTCACGTGGAA...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAATGTGGAAATCTGCTaGCCTCAGAGAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHNVEIC*PQRGKP
Trigger: AGGCTTTCCTCTCTGAGGCCAGCAGATTTCCACATT...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACCTCTTTCTCTGCAGATaGACTGTAACAAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYLFLCR*TVTKQR
Trigger: TCTCTGCTTTGTTACAGTCCATCTGCAGAGAAAGAG...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTGATTGGCCACTTCTaGGTGTGGGACACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQLIGHF*VWDTCR
Trigger: CCTGCAGGTGTCCCACACCCAGAAGTGGCCAATCAG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGTTAGCCATTGTTATTaGGTGTTAAGAGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWVSHCY*VLRAVS
Trigger: GGACACTGCTCTTAACACTCAATAACAATGGCTAAC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGCACAGCTGGCATAGGTaGGTTCAATTAATGTCATGT +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWHSWHR*VQLMSC
Trigger: ACATGACATTAATTGAACTCACCTATGCCAGCTGTG...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGGTTGGGGGCTTCAGCTaGGACCCTGACAGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQVGGFS*DPDSVK
Trigger: TTTCACACTGTCAGGGTCTCAGCTGAAGCCCCCAAC...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACTCTGTAGTTGACACATaGGTAAGCAATGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: REILWWRDSSYHAHVHIHSVVDT*VSNESG
Trigger: CCCAGACTCATTGCTTACTCATGTGTCAACTACAGA...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGTGGGAGTCCTATGAATaGGAGATGAGAAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLWESYE*EMRSRT
Trigger: AGTTCTGCTTCTCATCTCTCATTCATAGGACTCCCA...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTATGGAGAGCTACACTaGTTCAGTGGGGACCAAGCA +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISYGELH*FSGDQA
Trigger: TGCTTGGTCCCCACTGAAGCAGTGTAGCTCTCCATA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCGTCATGGACAGCCCCTaGTCAAGAAAAAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISVMDSP*SRKSMS
Trigger: GCTCATGCTTTTTCTTGAGCAGGGGCTGTCCATGAC...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGTTCTGCCAGGTGAGATaGTTTGCATATAGTACTTAC +
Preference number: 4 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVFCQVR*FAYSTY
Trigger: GTAAGTACTATATGCAAAGCATCTCACCTGGCAGAA...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAACTAAATTGGGTGTTTaGTTCAGATTCCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTTKLGV*FRFQSE
Trigger: CTCTGACTGGAATCTGAAGCAAACACCCAATTTAGT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAATCTCTCTCTTTCTCTaGAGATGGACTGTAACAAAG +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTISLFL*RWTVTK
Trigger: CTTTGTTACAGTCCATCTGCAGAGAAAGAGAGAGAT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACAAAATTGAACACATTTaGAGCAGCAGGACCAGACTA +
Preference number: 4 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYKIEHI*SSRTRL
Trigger: TAGTCTGGTCCTGCTGCTGCAAATGTGTTCAATTTT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTTCCATTGGCTTTACTaGTATCTCTACAGGATTGCG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWFHWLY*YLYRIA
Trigger: CGCAATCCTGTAGAGATAGCAGTAAAGCCAATGGAA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCCTATCCGGAACTGCTaGGAGCGCTTCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQPIRNC*ERFTVT
Trigger: AGTGACAGTGAAGCGCTCCCAGCAGTTCCGGATAGG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGGGTCAAGGTTATAACTaGGATAATGATTATGACAGA +
Preference number: 4 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVGQGYN*DNDYDR
Trigger: TCTGTCATAATCATTATCCCAGTTATAACCTTGACC...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAACAGAATATGGGAAGTaGGAATGGCTATATACATGG +
Preference number: 4 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTTEYGK*EWLYTW
Trigger: CCATGTATATAGCCATTCCCACTTCCCATATTCTGT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTCCAGAACAAGACTGTaGTCAACCTGTTATTTGCTG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSRTRL*STCYLL
Trigger: CAGCAAATAACAGGTTGACCACAGTCTTGTTCTGGA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGAGCTTCTTAACCAAGTaGAGCCTCAATGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWSFLTK*SLNVPF
Trigger: AAAAGGGACATTGAGGCTCCACTTGGTTAAGAAGCT...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTTCAAACCCAGACCTGTaGGGTGTCTCCCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCSNPDL*GVSLCT
Trigger: AGTGCACAGGGAGACACCCCACAGGTCTGGGTTTGA...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCCTACATCCCTCAGCTaGCCAAGTCAAACCCAGACC +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQPTSLS*PSQTQT
Trigger: GGTCTGGGTTTGACTTGGCCAGCTGAGGGATGTAGG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCAACTTGTTTATTTTCTaGTTTGGGGCACACCCACTT +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVNLFIF*FGAHPL
Trigger: AAGTGGGTGTGCCCCAAATCAGAAAATAAACAAGTT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCAACTTCTGTAAATGGTaGCATGGCTTCATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVNFCKW*HGFMCF
Trigger: GAAACACATGAAGCCATGTCACCATTTACAGAAGTT...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCTTAAGTGTATTCTGCTaGCAAGGGAAGCATAGGTTT +
Preference number: 4 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVLSVFC*QGKHRF
Trigger: AAACCTATGCTTCCCTTGGCAGCAGAATACACTTAA...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGCCTCAGAGGACACCTaGAGTACAGCTATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCASEDT*STAIQR
Trigger: TCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGACTATGCTGAGTGTTTaGTCAGGTTCAGAAATTTCC +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWTMLSV*SGSEIS
Trigger: GGAAATTTCTGAACCTGAGCAAACACTCAGCATAGT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCCCAATACCCTCAACTaGGGCTTTCTCGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQPNTLN*GFLVGQ
Trigger: TTGGCCAACGAGAAAGCCCCAGTTGAGGGTATTGGG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCGCCAAAAGGTTGAGGTaGATTGTGGTCATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISAKRLR*IVVMQS
Trigger: TGACTGCATGACCACAATCCACCTCAACCTTTTGGC...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCTCAGGGATGAGGGTTTaGATTGAGAATGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISSGMRV*IENGSG
Trigger: CCCACTTCCATTCTCAATCCAAACCCTCATCCCTGA...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGTGCTGGCCAATGGGATaGAGTAAAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQCWPMG*SKAPAW
Trigger: CCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCA...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 72 bp TGCAAATATATACAACCACCACTCTCCACGTCTCCTTaGCCTGATCATATCATTATTCCTCTCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CKYIQPPLSTSP*PDHIIIPLRWG
Trigger: GCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGGTTGTATATATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 72 bp TTGTGTTCCAGAACAAGACTGTGGTCAACCTGTTATTaGCTGCCTATAGTGGCGATGTCTCAGCTCTTCGAA +
Preference number: 4 (lower is better)
Translates to: LCSRTRLWSTCY*LPIVAMSQLFE
Trigger: TTCGAAGAGCTGAGACATCGCCACTATAGGCAGCAAATAACAGGTTGACCACAGTCTTGTTCTGGAACACAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
3UTR CAA 72 bp GAGAGGCAGTGTGATGGTTTGTGCCTAAGCCCTTTCTaGCCAAGACTTTCAAAGCCAAAAACTTCACCAGTT +
Preference number: 4 (lower is better)
Translates to: ERQCDGLCLSPF*PRLSKPKTSPV
Trigger: AACTGGTGAAGTTTTTGGCTTTGAAAGTCTTGGCAAGAAAGGGCTTAGGCACAAACCATCACACTGCCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTTACAGCCTAATGGCTTaGCCCACTCAAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCYSLMA*PTQNHP
Trigger: GGGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTA...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCACTATGACTGAGTGCTaGAGGGTACAAAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISTMTEC*RVQNGK
Trigger: CTTCCCATTTTGTACCCTGCAGCACTCAGTCATAGT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGAGTATCTCAACAAAATaGCTGGGAATGAATACATGG +
Preference number: 4 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSISTK*LGMNTW
Trigger: CCATGTATTCATTCCCAGCCATTTTGTTGAGATACT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCCAAAATGGCTGGGAATaGATACATGGGTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISQNGWE*IHGFQQ
Trigger: TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTG...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGCTCAACTCCAAATACTaGTTTAGGTTAAGTGTATTC +
Preference number: 4 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWLNSKY*FRLSVF
Trigger: GAATACACTTAACCTAAAGCAGTATTTGGAGTTGAG...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCATGGCTTTAGTAGTCTaGAGAAATCTACTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISMALVV*RNLLPL
Trigger: CAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCAT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTATTATTCCTCTCAGGTaGGGCAACATTCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCIIPLR*GNIPLD
Trigger: ATCCAGGGGAATGTTGCCCCACCTGAGAGGAATAAT...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTAGGAGCCAATGGAAGTaGGGTGTTTTCAGAAGGATA +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCRSQWK*GVFRRI
Trigger: TATCCTTCTGAAAACACCGCACTTCCATTGGCTCCT...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTAAAGAAAGACTTTTCTaGCCACCCTATCTCATGTGG +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCKERLF*PPYLMW
Trigger: CCACATGAGATAGGGTGGTCAGAAAAGTCTTTCTTT...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGTACCTTCATTATATGTaGCCTCAAGGTTATAGGGGC +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQYLHYM*PQGYRG
Trigger: GCCCCTATAACCTTGAGGGCACATATAATGAAGGTA...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR GCA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCCAAAAGGGGAAGGTTaGCTCAGAATTCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQPKGEG*LRILLF
Trigger: AAAAAGGAGAATTCTGAGGCAACCTTCCCCTTTTGG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR TCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTACCCACATGTTATGCTaGCAATGTCAGTATAAGAGA +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCTHMLC*QCQYKR
Trigger: TCTCTTATACTGACATTGTCAGCATAACATGTGGGT...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CCA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGGTTCATTTAGTTTGTaGTGTGATGTAGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCGSFSL*CDVVLS
Trigger: AGACAGAACTACATCACACCACAAACTAAATGAACC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATATGCCTGTCACCCCCATaGGACAAGCTGGGGAACAGC +
Preference number: 5 (lower is better)
Translates to: KARAFLGATGRREPLCPICLSPP*DKLGNS
Trigger: GCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCA...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS TCA 90 bp GCAAAGGCAGGCACCACTGGACCCCGGAAATCTGTCTGTAGCGTGTaGACCACAGAGACCTGGCTCACATCCACCAGGCTCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AKAGTTGPRKSVCSV*TTETWLTSTRLSFW
Trigger: CCAGAAGCTGAGCCTGGTGGATGTGAGCCAGGTCTCTGTGGTTCACACGCTACAGACAGATTTCCGGGGTCCAGTGGTGCCTGCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTAGGCAGTGTGATGGTTaGTGCCTAAGCCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: HGSHPRQRWDLPHHRRECRQCDG*CLSPFL
Trigger: CAAGAAAGGGCTTAGGCACAAACCATCACACTGCCT...ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS CCA 90 bp GCTCAGCTTCTGGGCCTCATACTCCAGCAACAGCCCCACCTTCTCTaGCTGCCCAATACCCTCAACTGGGGCTTTCTCGTTGGCCAACAT +
Preference number: 5 (lower is better)
Translates to: AQLLGLILQQQPHLL*LPNTLNWGFLVGQH
Trigger: ATGTTGGCCAACGAGAAAGCCCCAGTTGAGGGTATTGGGCAGCCAGAGAAGGTGGGGCTGTTGCTGGAGTATGAGGCCCAGAAGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS GCA 90 bp ACGATCATCAACACCAATGCAGCTATCCCGGGACATGTCCACATCTaGCACTCCTATCCGGAACTGCTGGGAGCGCTTCACTGTCACTTC +
Preference number: 5 (lower is better)
Translates to: TIINTNAAIPGHVHI*HSYPELLGALHCHF
Trigger: GAAGTGACAGTGAAGCGCTCCCAGCAGTTCCGGATAGGAGTGGCAGATGTGGACATGTCCCGGGATAGCTGCATTGGTGTTGATGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGCAACTCCCAATCGTTaGGCTCCCCAGCGGCACAAG +
Preference number: 5 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWATPNR*APQRHK
Trigger: CTTGTGCCGCTGGGGAGCCAAACGATTGGGAGTTGC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGGCCGAGATTGTGCCATaGCACTGTAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVAEIVP*HCSLGN
Trigger: GTTGCCCAGGCTACAGTGCAATGGCACAATCTCGGC...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCTGAGGCAGAAGTGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVLRQKC*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCACTTCTGCCTCAG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGAGACTGTCCTTGCCCTaGCCCTTTCCCTACACCCGA +
Preference number: 5 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVRLSLP*PFPYTR
Trigger: TCGGGTGTAGGGAAAGGGCAAGGGCAAGGACAGTCT...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAAATCCCAGGGGAACTTaGGCCCTCCAGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTNPRGT*ALQLPL
Trigger: CAGAGGAAGCTGGAGGGCCAAAGTTCCCCTGGGATT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATACTGTATCCCTCATATTaGTTCAGCTCTCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: KARAFLGATGRREPLCPILYPSY*FSSPGR
Trigger: TCTCCCTGGAGAGCTGAACAAATATGAGGGATACAG...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGCCCACCAAGCCATATTaGACACCCGTATCATCTCTG +
Preference number: 5 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVPTKPY*TPVSSL
Trigger: CAGAGATGATACGGGTGTCAAATATGGCTTGGTGGG...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGACATTCAAGGCCACCTaGGTGGGCTCCAATCCCACC +
Preference number: 5 (lower is better)
Translates to: KLLCSCIPHICSALQGDWTFKAT*VGSNPT
Trigger: GGTGGGATTGGAGCCCACCAAGGTGGCCTTGAATGT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGGGGAAAAGGAGGGTTaGGCTGTATGCCTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKGEKEG*AVCLAF
Trigger: GAAAGCTAGGCATACAGCCAAACCCTCCTTTTCCCC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GCTGACAATGTCAGTATAAGAGACTGCACCACCTCCGTCATCCCCACTCAGTACAGAAATCTACTCCCCTaGGCCAGGACATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ADNVSIRDCTTSVIPTQYRNLLP*ARTCCC
Trigger: GCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCT...GTACTGAGTGGGGATGACGGAGGTGGTGCAGTCTCTTATACTGACATTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGGGGGCTCTGATTCCTTaGAGGGTCCCCAGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLGALIP*RVPRRH
Trigger: GTGCCTTCTGGGGACCCTCAAAGGAATCAGAGCCCC...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGACTACGTGCACAAGTTaGTGGGCAAAGAGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVTTCTS*WAKSQV
Trigger: CACTTGGCTCTTTGCCCACAAACTTGTGCACGTAGT...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGACTGGGGCTTTCTCGTaGGCCAACATGGTGTACCAC +
Preference number: 5 (lower is better)
Translates to: KLLCSCIPHICSALQGDWTGAFS*ANMVYH
Trigger: GTGGTACACCATGTTGGCCAACGAGAAAGCCCCAGT...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAAAGATGATCATGATATaGCACAGAGGACCCAACACT +
Preference number: 5 (lower is better)
Translates to: KARAFLGATGRREPLCPIKMIMI*HRGPNT
Trigger: AGTGTTGGGTCCTCTGTGCAATATCATGATCATCTT...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACATGCTGGCTCTTCTCCTaGGGGTCTCAGCTTAGATGT +
Preference number: 5 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTCWLFS*GSQLRC
Trigger: ACATCTAAGCTGAGACCCCAAGGAGAAGAGCCAGCA...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TCCAGGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGGATAGAGGTGGAAGCTaGTTCCTGCCTCTCATTCAC +
Preference number: 5 (lower is better)
Translates to: SRCVSSNIVLLTQAFRKKDRGGS*FLPLIH
Trigger: GTGAATGAGAGGCAGGAACAAGCTTCCACCTCTATC...CTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAACCTGGAACTGTGAGTaGGCCTTGAACAGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTTWNCE*ALNRVS
Trigger: TGACACCCTGTTCAAGGCCAACTCACAGTTCCAGGT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGGAGGACAGCACTATaGGGCACTGATTGGCCACTT +
Preference number: 5 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWGRTAL*GTDWPL
Trigger: AAGTGGCCAATCAGTGCCCAATAGTGCTGTCCTCCC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAGCTATCTCTACAGGATaGCGGATACACAAAGATATG +
Preference number: 5 (lower is better)
Translates to: KARAFLGATGRREPLCPIAISTG*RIHKDM
Trigger: CATATCTTTGTGTATCCGCAATCCTGTAGAGATAGC...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGTACAGCCTAATGGCTaGCCCCACTCAAAACCATCC +
Preference number: 5 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWVQPNG*PHSKPS
Trigger: GGATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTAC...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAAACTATGCTGAGTGTTaGCTCAGGTTCAGAAATTTC +
Preference number: 5 (lower is better)
Translates to: KARAFLGATGRREPLCPINYAEC*LRFRNF
Trigger: GAAATTTCTGAACCTGAGCAAACACTCAGCATAGTT...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACCCACTACCCTCAGGTTaGCCTTGTCAGCCATGGATA +
Preference number: 5 (lower is better)
Translates to: REILWWRDSSYHAHVHIHPLPSG*PCQPWI
Trigger: TATCCATGGCTGACAAGGCAAACCTGAGGGTAGTGG...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGGCTCGGGCATTTCTGGGAGCAACAGGCAGGAGGGAACCCCTCTGCCCTATAACTTCAAGTACTAAATaGGGTGTTTGCTTCAGATTC +
Preference number: 5 (lower is better)
Translates to: KARAFLGATGRREPLCPITSSTK*GVCFRF
Trigger: GAATCTGAAGCAAACACCCAATTTAGTACTTGAAGT...TATAGGGCAGAGGGGTTCCCTCCTGCCTGTTGCTCCCAGAAATGCCCGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGGGTCTCTCCTATGTaGCCTAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: REILWWRDSSYHAHVHIHRVSPM*PRLVSN
Trigger: GTTTGAGACCAGCCTAGGCAACATAGGAGAGACCCT...GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTCTCCCTCAATGAGGAAGGTGAGCACTACCAAGGCTCAGACCGTACTTACAAAGGTAACAGAGCTGTaGATCCCAAACCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: SSPSMRKVSTTKAQTVLTKVTEL*IPNLKT
Trigger: GGTCTTCAGGTTTGGGATCAACAGCTCTGTTACCTT...TGTAAGTACGGTCTGAGCCTTGGTAGTGCTCACCTTCCTCATTGAGGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp CCACCACTCTCCACGTCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGTGGTCAACCTGTTATTaGCTGCCTATAGTGGCGATG +
Preference number: 5 (lower is better)
Translates to: PPLSTSPLPDHIIIPLRWWSTCY*LPIVAM
Trigger: CATCGCCACTATAGGCAGCAAATAACAGGTTGACCA...CCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGACGTGGAGAGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCTGCCTAAGCCCTTTCTaGCCAAGACTTTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVCLSPF*PRLSKP
Trigger: TGGCTTTGAAAGTCTTGGCAAGAAAGGGCTTAGGCA...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GGCATGAACCATCATGCTGGCCAATGGGATGGAGTAAAGCTCCAGCATGGGGTGTTTCTCTTCCAGGTGTaGCAGTATCTCAACAAAATG +
Preference number: 5 (lower is better)
Translates to: GMNHHAGQWDGVKLQHGVFLFQV*QYLNKM
Trigger: CATTTTGTTGAGATACTGCAACACCTGGAAGAGAAA...CACCCCATGCTGGAGCTTTACTCCATCCCATTGGCCAGCATGATGGTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTTGTCATTCCTGATTTaGAGGAGTTCACGGGCCATG +
Preference number: 5 (lower is better)
Translates to: KLLCSCIPHICSALQGDWLSFLI*RSSRAM
Trigger: CATGGCCCGTGAACTCCTCAAAATCAGGAATGACAA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCAGGACAGACTGTCCTaGCCCTTGCCCTTTCCCTAC +
Preference number: 5 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQQDRLS*PLPFPY
Trigger: GTAGGGAAAGGGCAAGGGCAAGGACAGTCTGTCCTG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGAAGACTCTTGGTGGTTaGTATTTCCCCAGGAATCCC +
Preference number: 5 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLKTLGG*YFPRNP
Trigger: GGGATTCCTGGGGAAATACAAACCACCAAGAGTCTT...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCACCCTCAGGTTTGCCTaGTCAGCCATGGATATGGAA +
Preference number: 5 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISTLRFA*SAMDME
Trigger: TTCCATATCCATGGCTGACAAGGCAAACCTGAGGGT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCAGGGAGACTGGTCATGTGGGTATGATTaGTGTTCCAGAACAAGACTG +
Preference number: 5 (lower is better)
Translates to: KLLCSCIPHICSALQGDWSCGYD*CSRTRL
Trigger: CAGTCTTGTTCTGGAACACAAATCATACCCACATGA...CCAGTCTCCCTGGAGAGCTGAACAAATATGAGGGATACAGGAACACAGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCGAATTGTGCTTCACATaGCTGGCTCTTCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISELCFT*LALLLG
Trigger: CCCAAGGAGAAGAGCCAGCAATGTGAAGCACAATTC...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGGCTGAGTCTCTCCCCTaGTTCTGTGATGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQAESLP*FCDGSI
Trigger: GATGGAGCCATCACAGAACAAGGGGAGAGACTCAGC...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGACCAAAAGGGGAAGGTaGCCTCAGAATTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLTKRGR*PQNSPF
Trigger: AAAAGGAGAATTCTGAGGCAACCTTCCCCTTTTGGT...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TCTCCTTTGCCTGATCATATCATTATTCCTCTCAGGTGGGGCAACATTCCCCTGATGTGGATCGCATCTTaGAGGATGTCAAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SPLPDHIIIPLRWGNIPLMWIAS*RMSKSS
Trigger: TGAGCTCTTTGACATCCTCAAAGATGCGATCCACAT...CAGGGGAATGTTGCCCCACCTGAGAGGAATAATGATATGATCAGGCAAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCATTCCGAAAGAAGTTaGTCATTCCTGATTTTGAGG +
Preference number: 5 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVHSERS*SFLILR
Trigger: CCTCAAAATCAGGAATGACAAACTTCTTTCGGAATG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TTTGTTTCTCTGCCCTTCCTGATTAGCCCTGTCATGCCTTTCTCCCTAGCAGTCTGTTTATTTTCTGATTaGGGGCACACCCACTTTATC +
Preference number: 5 (lower is better)
Translates to: FVSLPFLISPVMPFSLAVCLFSD*GHTHFI
Trigger: GATAAAGTGGGTGTGCCCCAAATCAGAAAATAAACA...GACTGCTAGGGAGAAAGGCATGACAGGGCTAATCAGGAAGGGCAGAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp AGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCAGTCATTTGTAAACTaGTTAAGAGTACAGCCTAAC +
Preference number: 5 (lower is better)
Translates to: SCIRSHPPGGTQCHGNDVQSFVN*LRVQPN
Trigger: GTTAGGCTGTACTCTTAACAAGTTTACAAATGACTG...CACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGTATAAAGAGATGTCTTaGGGAGGCCGAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQYKEMS*GGRGRW
Trigger: CCACCTGCCTCGGCCTCCCAAAGACATCTCTTTATA...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCCAGTGGCTAAGACTCTaGGTGGTTTGTATTTCCCCA +
Preference number: 5 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISQWLRL*VVCISP
Trigger: TGGGGAAATACAAACCACCAAGAGTCTTAGCCACTG...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GAGCTGTTGATCCCAAACCTGAAGACCACTCAACCTTCTTTATTCCCAATTTCCATTCCTGATCGAGGCTaGCAAAGTGAATCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: ELLIPNLKTTQPSLFPISIPDRG*QSESFC
Trigger: GCAAAAGGATTCACTTTGCAAGCCTCGATCAGGAAT...GGAAATTGGGAATAAAGAAGGTTGAGTGGTCTTCAGGTTTGGGATCAACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTGTTGCAGCTCCTGAATaGTGCTTCACATTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCVAAPE*CFTLLA
Trigger: AGCCAGCAATGTGAAGCACAATTCAGGAGCTGCAAC...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp TTAATGTCATGTGGGTATGATTTGTGTTCCAGAACAAGACTGTGGTCAACCTGTAAACAACCAGAGGTGTaGCAGCTCCTGAATTGTGCT +
Preference number: 5 (lower is better)
Translates to: LMSCGYDLCSRTRLWSTCKQPEV*QLLNCA
Trigger: AGCACAATTCAGGAGCTGCAACACCTCTGGTTGTTT...ACAGGTTGACCACAGTCTTGTTCTGGAACACAAATCATACCCACATGACATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGAGGAAGGCAATTAGGTaGAGACTCCTTAGACGAGTT +
Preference number: 5 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQRKAIR*RLLRRV
Trigger: AACTCGTCTAAGGAGTCTCAACCTAATTGCCTTCCT...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGCTCTCCACGTCTCCTTaGCCTGATCATATCATTATT +
Preference number: 5 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQLSTSP*PDHIII
Trigger: AATAATGATATGATCAGGCAAAGGAGACGTGGAGAG...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS-3UTR CAA 90 bp GATAGGTATTATCCTCTAAGCTCCTGTGTTCCTGTATCCCTCATATTTGTTCAGAGGGGTTCATTTAGTTaGTGGTGTGATGTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: DRYYPLSSCVPVSLIFVQRGSFS*WCDVVL
Trigger: CAGAACTACATCACACCACAAACTAAATGAACCCCT...CTGAACAAATATGAGGGATACAGGAACACAGGAGCTTAGAGGATAATACCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS TCA 72 bp GGCACCACTGGACCCCGGAAATCTGTCTGTAGCGTGTaGACCACAGAGACCTGGCTCACATCCACCAGGCTC +
Preference number: 6 (lower is better)
Translates to: GTTGPRKSVCSV*TTETWLTSTRL
Trigger: GAGCCTGGTGGATGTGAGCCAGGTCTCTGTGGTTCACACGCTACAGACAGATTTCCGGGGTCCAGTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS CCA 72 bp CTCTCTGGGCCTCTGTGGAGGCAACTCCCAATCGTTTaGCTCCCCAGCGGCACAAGCGCAAAGAACGTGCAA +
Preference number: 6 (lower is better)
Translates to: LSGPLWRQLPIV*LPSGTSAKNVQ
Trigger: TTGCACGTTCTTTGCGCTTGTGCCGCTGGGGAGCCAAACGATTGGGAGTTGCCTCCACAGAGGCCCAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS CAA 90 bp AAACTGACGCCTCTCTGGGCCTCTGTGGAGGCAACTCCCAATCGTTaGGCTCCCCAGCGGCACAAGCGCAAAGAACGTGCAAAAAGCAGC +
Preference number: 6 (lower is better)
Translates to: KLTPLWASVEATPNR*APQRHKRKERAKSS
Trigger: GCTGCTTTTTGCACGTTCTTTGCGCTTGTGCCGCTGGGGAGCCAAACGATTGGGAGTTGCCTCCACAGAGGCCCAGAGAGGCGTCAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS CCA 72 bp CTGGCTGCCCAATACCCTCAACTGGGGCTTTCTCGTTaGCCAACATGGTGTACCACTTGCGCTGGGCATAGG +
Preference number: 6 (lower is better)
Translates to: LAAQYPQLGLSR*PTWCTTCAGHR
Trigger: CCTATGCCCAGCGCAAGTGGTACACCATGTTGGCCAACGAGAAAGCCCCAGTTGAGGGTATTGGGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS CCA 72 bp CTGGGCCTCATACTCCAGCAACAGCCCCACCTTCTCTaGCTGCCCAATACCCTCAACTGGGGCTTTCTCGTT +
Preference number: 6 (lower is better)
Translates to: LGLILQQQPHLL*LPNTLNWGFLV
Trigger: AACGAGAAAGCCCCAGTTGAGGGTATTGGGCAGCCAGAGAAGGTGGGGCTGTTGCTGGAGTATGAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS GCA 72 bp AACACCAATGCAGCTATCCCGGGACATGTCCACATCTaGCACTCCTATCCGGAACTGCTGGGAGCGCTTCAC +
Preference number: 6 (lower is better)
Translates to: NTNAAIPGHVHI*HSYPELLGALH
Trigger: GTGAAGCGCTCCCAGCAGTTCCGGATAGGAGTGGCAGATGTGGACATGTCCCGGGATAGCTGCATTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7
CDS CAA 90 bp ACATTCAAGGCCACCTTGGTGGGCTCCAATCCCACCAAGCCATATTaGACACCCGTATCATCTCTGAAGAGTGCCAGGCTGCTGTGGGCG +
Preference number: 6 (lower is better)
Translates to: TFKATLVGSNPTKPY*TPVSSLKSARLLWA
Trigger: CGCCCACAGCAGCCTGGCACTCTTCAGAGATGATACGGGTGTCAAATATGGCTTGGTGGGATTGGAGCCCACCAAGGTGGCCTTGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338146.7