RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPRYD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000167778

Ensembl transcript IDs: ENST00000301463.9, ENST00000537540.1, ENST00000547257.1, ENST00000547837.5, ENST00000550252.1, ENST00000550564.1

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCTGCGGGTGCTaGGTGGGTGCCGGGCCTGGGCCAGCCCCACATCCACGATGCTTT +
Preference number: 1 (lower is better)
Translates to: LQGPRSPPRSSGCGC*VGAGPGPAPHPRCF
Trigger: AAAGCATCGTGGATGTGGGGCTGGCCCAGGCCCGGCACCCACTCAGCACCCGCAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR GCA 90 bp GGCCTGAGCCAGTGGGGGCAGAGTGACTACACACCTCCAGGGGCCTaGTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTG +
Preference number: 1 (lower is better)
Translates to: GLSQWGQSDYTPPGA*WVNEASGKSGTGCL
Trigger: CAGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGGCTCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
3UTR CCA 90 bp GGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCAGGTTGGGGTaGGGAGCCAGCTCTCAAGGGAAAGATGGAGAGCCAGTGGGGGCA +
Preference number: 1 (lower is better)
Translates to: GARDLDPLWCLSRLG*GASSQGKDGEPVGA
Trigger: TGCCCCCACTGGCTCTCCATCTTTCCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547257.1
3UTR GCA 90 bp CCCTACAGCCCTACCCGCTCTGTGCAAACCAAGGCCAACAGCTCCTaGTGCCTCTTCCTCCCTGGAAAAGTCACTGTTACGGGGAGGGGG +
Preference number: 1 (lower is better)
Translates to: PYSPTRSVQTKANSS*CLFLPGKVTVTGRG
Trigger: CCCCCTCCCCGTAACAGTGACTTTTCCAGGGAGGAAGAGGCAGCAGGAGCTGTTGGCCTTGGTTTGCACAGAGCGGGTAGGGCTGTAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR GCA 90 bp ATGGAGAGCCAGTGGGGGCAGAGTGACTACACACCTCCAGGGGCCTaGTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTG +
Preference number: 1 (lower is better)
Translates to: MESQWGQSDYTPPGA*WVNEASGKSGTGCL
Trigger: CAGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGGCTCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547257.1
3UTR TCA 90 bp CACCCACACAGGGCCGGTGAGGGAAAGGGGGACCCAGAAGCCCACTaGCCAAAGCGAGTGGGACCACCCACATACCAACACCATTCTTTG +
Preference number: 1 (lower is better)
Translates to: HPHRAGEGKGDPEAH*PKRVGPPTYQHHSL
Trigger: CAAAGAATGGTGTTGGTATGTGGGTGGTCCCACTCGCTTTGGTCAGTGGGCTTCTGGGTCCCCCTTTCCCTCACCGGCCCTGTGTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR GCA 90 bp CTACCCTCTACAAAGCATCATGCCCGAATAGCAGCTGAGATAGGGTaGTCACGCCTCTCCACCCACACAGGGCCGGTGAGGGAAAGGGGG +
Preference number: 1 (lower is better)
Translates to: LPSTKHHARIAAEIG*SRLSTHTGPVRERG
Trigger: CCCCCTTTCCCTCACCGGCCCTGTGTGGGTGGAGAGGCGTGAGCACCCTATCTCAGCTGCTATTCGGGCATGATGCTTTGTAGAGGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 90 bp GGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCAGGTTGGGGTaGGGAGCCAGCTCTCAAGGGAAAGATGGAGAGCCTAGAGGAGTC +
Preference number: 1 (lower is better)
Translates to: GARDLDPLWCLSRLG*GASSQGKDGEPRGV
Trigger: GACTCCTCTAGGCTCTCCATCTTTCCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR GCA 90 bp GCCCAACATTGGTCCACATCTCCCCATGAGCAAGCTGCCTTCGGCTaGCCCCATCCAGCAGTCCTGTTCCTAGCCCAGTGGACTAGAAAG +
Preference number: 1 (lower is better)
Translates to: AQHWSTSPHEQAAFG*PHPAVLFLAQWTRK
Trigger: CTTTCTAGTCCACTGGGCTAGGAACAGGACTGCTGGATGGGGGCAGCCGAAGGCAGCTTGCTCATGGGGAGATGTGGACCAATGTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR TCA 90 bp GCTGTCTACTCTACCCTCTACAAAGCATCATGCCCGAATAGCAGCTaGGATAGGGTGCTCACGCCTCTCCACCCACACAGGGCCGGTGAG +
Preference number: 1 (lower is better)
Translates to: AVYSTLYKASCPNSS*DRVLTPLHPHRAGE
Trigger: CTCACCGGCCCTGTGTGGGTGGAGAGGCGTGAGCACCCTATCTCAGCTGCTATTCGGGCATGATGCTTTGTAGAGGGTAGAGTAGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR TCA 90 bp CATATGATTCCCATCCCTGGCCCAACATTGGTCCACATCTCCCCATaGGCAAGCTGCCTTCGGCTGCCCCCATCCAGCAGTCCTGTTCCT +
Preference number: 1 (lower is better)
Translates to: HMIPIPGPTLVHISP*ASCLRLPPSSSPVP
Trigger: AGGAACAGGACTGCTGGATGGGGGCAGCCGAAGGCAGCTTGCTCATGGGGAGATGTGGACCAATGTTGGGCCAGGGATGGGAATCATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 90 bp CCGGTGAGGGAAAGGGGGACCCAGAAGCCCACTGACCAAAGCGAGTaGGACCACCCACATACCAACACCATTCTTTGGGTCCATTCCTGT +
Preference number: 1 (lower is better)
Translates to: PVRERGTQKPTDQSE*DHPHTNTILWVHSC
Trigger: ACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGGTCCCACTCGCTTTGGTCAGTGGGCTTCTGGGTCCCCCTTTCCCTCACCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 90 bp GCTGCCTTCGGCTGCCCCCATCCAGCAGTCCTGTTCCTAGCCCAGTaGACTAGAAAGGCTCCTGGTTCCGGCCATACTGATAAATACGGA +
Preference number: 1 (lower is better)
Translates to: AAFGCPHPAVLFLAQ*TRKAPGSGHTDKYG
Trigger: TCCGTATTTATCAGTATGGCCGGAACCAGGAGCCTTTCTAGTCCACTGGGCTAGGAACAGGACTGCTGGATGGGGGCAGCCGAAGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 90 bp GCTCAGGCCTGTAGCCAGGCCCATGGAACATATGATTCCCATCCCTaGCCCAACATTGGTCCACATCTCCCCATGAGCAAGCTGCCTTCG +
Preference number: 1 (lower is better)
Translates to: AQACSQAHGTYDSHP*PNIGPHLPMSKLPS
Trigger: CGAAGGCAGCTTGCTCATGGGGAGATGTGGACCAATGTTGGGCCAGGGATGGGAATCATATGTTCCATGGGCCTGGCTACAGGCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 90 bp ACTGACCAAAGCGAGTGGGACCACCCACATACCAACACCATTCTTTaGGTCCATTCCTGTCCAACCAGGGACTCAGGCCCAGGGACTGAC +
Preference number: 1 (lower is better)
Translates to: TDQSEWDHPHTNTIL*VHSCPTRDSGPGTD
Trigger: GTCAGTCCCTGGGCCTGAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGGTCCCACTCGCTTTGGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR GCA 90 bp CATGGAAGATCTTCCCATCGTCTGCATGATAAGCCACAGACCCTCTaGTCCAGCCAGGGTGCCTGTTCTTGGGATAGTCCTTCCGTGCCA +
Preference number: 1 (lower is better)
Translates to: HGRSSHRLHDKPQTL*SSQGACSWDSPSVP
Trigger: TGGCACGGAAGGACTATCCCAAGAACAGGCACCCTGGCTGGAGCAGAGGGTCTGTGGCTTATCATGCAGACGATGGGAAGATCTTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR TCA 90 bp GAGGGCTTGGTGGGGAGGACACATGTAAGTGCTAGAATCAAACACTaGAGCGAAACAGGCAACTGGCACAAGCAGCAAGCTGAGGCATGG +
Preference number: 1 (lower is better)
Translates to: EGLVGRTHVSARIKH*SETGNWHKQQAEAW
Trigger: CCATGCCTCAGCTTGCTGCTTGTGCCAGTTGCCTGTTTCGCTTCAGTGTTTGATTCTAGCACTTACATGTGTCCTCCCCACCAAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR CCA 90 bp GCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCTGCGGGTGCTAGTGGGTGCCGGGCCTaGGCCAGCCCCACATCCACG +
Preference number: 2 (lower is better)
Translates to: AFLSRVHDLHLEVVAAGASGCRA*ASPTST
Trigger: CGTGGATGTGGGGCTGGCCCAGGCCCGGCACCCACT...AGCACCCGCAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR-3UTR TCA 90 bp ATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACAGCCCCTCCAGTGGGGGCAGAGTaGCTACACACCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: MEGEKGVKALVPCHLTAPPVGAE*LHTSRG
Trigger: GCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGG...AGGGGCTGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR-3UTR TCA 90 bp AGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAAGCGTGACAGGGGCCTaGGCCAGTGGGGGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: SLSPNTRELGTWVALVKKSVTGA*ASGGRV
Trigger: CACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCT...TTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR GCA 90 bp GGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTaGCTGGCCCAGCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GQSDYTPPGACWVNEASGKSGTG*LAQQRV
Trigger: CACCCTCTGCTGGGCCAGGCACCCAGTTCCTGACTT...CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
3UTR-3UTR CCA 90 bp GCTAAGGCTCTGGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCCCCAGAGCCGGTAAACGAAGCCTCTaGGAAGTCAGGAACTGGGTG +
Preference number: 2 (lower is better)
Translates to: AKALGSCPHAGRETGPRAGKRSL*EVRNWV
Trigger: CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACC...GGCTCTGGGGCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR-3UTR CCA 90 bp GTGAGGGAAAGGGGGACCCAGAAGCCCACTGACCAAAGCGAGTGGGACCACCCAAGGGGCCTGAGCCAGTaGGGGCAGAGTGACTACACA +
Preference number: 2 (lower is better)
Translates to: VRERGTQKPTDQSEWDHPRGLSQ*GQSDYT
Trigger: TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCT...TGGGTGGTCCCACTCGCTTTGGTCAGTGGGCTTCTGGGTCCCCCTTTCCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR CCA 90 bp GCAGCACAACAGCTCACCCGCTTTCCCTACAGCCCTACCCGCTCTGTGCAAACCCTGAGCAGGTTGGGGTaGGGAGCCAGCTCTCAAGGG +
Preference number: 2 (lower is better)
Translates to: AAQQLTRFPYSPTRSVQTLSRLG*GASSQG
Trigger: CCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAG...GGTTTGCACAGAGCGGGTAGGGCTGTAGGGAAAGCGGGTGAGCTGTTGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR TCA 90 bp CTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGTATGGGGAGCCAGCCAGTGGGGGCAGAGTaGCTACACACCTCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LLNMQQAPTHVGPGMGSQPVGAE*LHTSRG
Trigger: GCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGG...CTGGCTCCCCATACCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR-3UTR TCA 90 bp GCCCCAGAGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTGTGAAAGGACAGAGATaGCCAAAGAGAGGTCCCCTG +
Preference number: 2 (lower is better)
Translates to: APEPQPQYPGARDMGGTGVKGQR*PKRGPL
Trigger: CAGGGGACCTCTCTTTGGTCATCTCTGTCCTTTCAC...ACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCTCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR GCA 90 bp CCAGGGACTCAGGCCCAGGGACTGACAACAGTGGCAGCACCAGGTCAGAAACGTAAGTCAGGAACTGGGTaGCTGGCCCAGCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: PGTQAQGLTTVAAPGQKRKSGTG*LAQQRV
Trigger: CACCCTCTGCTGGGCCAGGCACCCAGTTCCTGACTT...ACGTTTCTGACCTGGTGCTGCCACTGTTGTCAGTCCCTGGGCCTGAGTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR CCA 90 bp GCTTGCTCAGCTAAGGCTCTGGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCCTCTCAAGGGAAAGATaGAGAGCCAGTGGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: ACSAKALGSCPHAGRETGLSRER*RASGGR
Trigger: TCTGCCCCCACTGGCTCTCCATCTTTCCCTTGAGAG...GCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGAGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547257.1
3UTR-3UTR CCA 90 bp CATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGCACGCTCAGCTAAGGCTCTaGGGTCTTGCCCTCACGCTG +
Preference number: 2 (lower is better)
Translates to: HFIHRRVGSEGQREAQQHAQLRL*GLALTL
Trigger: CAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGAGC...GTGCTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR GCA 90 bp AGAAAGGATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACAAGTCAGGAACTGGGTaGCTGGCCCAGCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: RKDGRGERSEGPSALSPHKSGTG*LAQQRV
Trigger: CACCCTCTGCTGGGCCAGGCACCCAGTTCCTGACTT...GTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCATCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR-3UTR GCA 90 bp AACACTTATTCACAGGAAGGTCAAAGCCTCATCTCCCAGGGGACGTATCTGTGCAGGGAGGGGCCACGCTaGCCCTCTGGGCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: NTYSQEGQSLISQGTYLCREGPR*PSGLAQ
Trigger: CTGAGCAAGCCCAGAGGGGCAGCGTGGCCCCTCCCT...GCACAGATACGTCCCCTGGGAGATGAGGCTTTGACCTTCCTGTGAATAAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR CCA 90 bp TACATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGAGGCACCCACCCATGTaGGTCCAGGTATGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: YIHFIHRRVGSEGQREAQRHPPM*VQVWGA
Trigger: GGCTCCCCATACCTGGACCCACATGGGTGGGTGCCT...CTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR TCA 90 bp GCCTGTAGCCAGGCCCATGGAACATATGATTCCCATCCCTGGCCCAACATTGGTGGAGAAATACCATGGTaGGTAGGGGAGGGGGCTGTC +
Preference number: 2 (lower is better)
Translates to: ACSQAHGTYDSHPWPNIGGEIPW*VGEGAV
Trigger: GACAGCCCCCTCCCCTACTCACCATGGTATTTCTCC...ACCAATGTTGGGCCAGGGATGGGAATCATATGTTCCATGGGCCTGGCTACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR GCA 90 bp TCACCTCACAGCCCCTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTACACCTCCAGGGGCCTaGTGGGTAAACGAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: SPHSPSLLNMQQAPTHVGTPPGA*WVNEAS
Trigger: AGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGT...ACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAGGGGCTGTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR-3UTR GCA 90 bp ATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGCTAGATCCTCTGTGGTaGCTGAGCAGGTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: IHFIHRRVGSEGQREAQQLDPLW*LSRLGW
Trigger: CCACCCCAACCTGCTCAGGCACCACAGAGGATCTAG...CTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR GCA 90 bp GCCTGTTCTTGGGATAGTCCTTCCGTGCCAGCCCCAGGGCGATGTAGCATTTCTGCCCCACATCCACGATaGTTTTGCCCTTCCCTAAGT +
Preference number: 2 (lower is better)
Translates to: ACSWDSPSVPAPGRCSISAPHPR*FCPSLS
Trigger: ACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGC...AGAAATGCTACATCGCCCTGGGGCTGGCACGGAAGGACTATCCCAAGAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR-3UTR CCA 90 bp AGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGTAAACGAAGCCTCTaGGAAGTCAGGAACTGGGTG +
Preference number: 2 (lower is better)
Translates to: SLSPNTRELGTWVALVKKGKRSL*EVRNWV
Trigger: CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACC...TTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR-3UTR CCA 90 bp CAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGATGAAGATGGAGAGCCAGTaGGGGCAGAGTGACTACACA +
Preference number: 2 (lower is better)
Translates to: QPQYPGARDMGGTGKERMKMESQ*GQSDYT
Trigger: TGTGTAGTCACTCTGCCCCCACTGGCTCTCCATCTT...CATCCTTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547257.1
3UTR-3UTR CCA 90 bp CATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGCACACCAACACCATTCTTTaGGTCCATTCCTGTCCAACC +
Preference number: 2 (lower is better)
Translates to: HFIHRRVGSEGQREAQQHTNTIL*VHSCPT
Trigger: GGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGT...GTGCTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR GCA 90 bp GATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCTGCGCATCCACGATGCTTTTaGCCTTCCCTAAGTACTCCA +
Preference number: 2 (lower is better)
Translates to: DVAFLSRVHDLHLEVVAAHPRCF*PSLSTP
Trigger: TGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATG...CGCAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR-3UTR CCA 90 bp AACACTTATTCACAGGAAGGTCAAAGCCTCATCTCCCAGGGGACGTATCTGTGCTCATACATCGTAGGGTaGGAAGCGAGGGCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: NTYSQEGQSLISQGTYLCSYIVG*EARAKG
Trigger: CCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGA...GCACAGATACGTCCCCTGGGAGATGAGGCTTTGACCTTCCTGTGAATAAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR CCA 90 bp AACACTTATTCACAGGAAGGTCAAAGCCTCATCTCCCAGGGGACGTATCTGTGCACCAGGTCAGAAACGTaGGCACAGAGAAGCGTGACA +
Preference number: 2 (lower is better)
Translates to: NTYSQEGQSLISQGTYLCTRSET*AQRSVT
Trigger: TGTCACGCTTCTCTGTGCCCACGTTTCTGACCTGGT...GCACAGATACGTCCCCTGGGAGATGAGGCTTTGACCTTCCTGTGAATAAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR-3UTR TCA 90 bp ACTTTAGCCGAAATTGGAGTCAACACTTATTCACAGGAAGGTCAAAGCCTCATCGCTAGAATCAAACACTaGAGCGAAACAGGCAACTGG +
Preference number: 2 (lower is better)
Translates to: TLAEIGVNTYSQEGQSLIARIKH*SETGNW
Trigger: CCAGTTGCCTGTTTCGCTTCAGTGTTTGATTCTAGC...GATGAGGCTTTGACCTTCCTGTGAATAAGTGTTGACTCCAATTTCGGCTAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 72 bp CCACGCTGCCCCTCTGGGCTTGCTCAGCTAAGGCTCTaGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCC +
Preference number: 3 (lower is better)
Translates to: PRCPSGLAQLRL*GLALTLAGRQA
Trigger: GGCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGAGCAAGCCCAGAGGGGCAGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR TCA 72 bp TCAGAAACGTGGGCACAGAGAAGCGTGACAGGGGCCTaGGCCAGTGGGGGCAGAGTGACTACACACCTCCAG +
Preference number: 3 (lower is better)
Translates to: SETWAQRSVTGA*ASGGRVTTHLQ
Trigger: CTGGAGGTGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCCCACGTTTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
3UTR CCA 72 bp TGGGGGCAGAGTGACTACACACCTCCAGGGGCCTGCTaGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGG +
Preference number: 3 (lower is better)
Translates to: WGQSDYTPPGAC*VNEASGKSGTG
Trigger: CCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
3UTR GCA 72 bp CAGTGGGGGCAGAGTGACTACACACCTCCAGGGGCCTaGTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACT +
Preference number: 3 (lower is better)
Translates to: QWGQSDYTPPGA*WVNEASGKSGT
Trigger: AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
3UTR GCA 72 bp ACAAAGCATCATGCCCGAATAGCAGCTGAGATAGGGTaGTCACGCCTCTCCACCCACACAGGGCCGGTGAGG +
Preference number: 3 (lower is better)
Translates to: TKHHARIAAEIG*SRLSTHTGPVR
Trigger: CCTCACCGGCCCTGTGTGGGTGGAGAGGCGTGAGCACCCTATCTCAGCTGCTATTCGGGCATGATGCTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 72 bp ACATGCAACAGGCACCCACCCATGTGGGTCCAGGTATaGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: TCNRHPPMWVQV*GARDLDPLWCL
Trigger: CAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATACCTGGACCCACATGGGTGGGTGCCTGTTGCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
3UTR CCA 72 bp GGCTGCCCCCATCCAGCAGTCCTGTTCCTAGCCCAGTaGACTAGAAAGGCTCCTGGTTCCGGCCATACTGAT +
Preference number: 3 (lower is better)
Translates to: GCPHPAVLFLAQ*TRKAPGSGHTD
Trigger: ATCAGTATGGCCGGAACCAGGAGCCTTTCTAGTCCACTGGGCTAGGAACAGGACTGCTGGATGGGGGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 72 bp AGCGAGTGGGACCACCCACATACCAACACCATTCTTTaGGTCCATTCCTGTCCAACCAGGGACTCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: SEWDHPHTNTIL*VHSCPTRDSGP
Trigger: TGGGCCTGAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGGTCCCACTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 72 bp GAAAGGGGGACCCAGAAGCCCACTGACCAAAGCGAGTaGGACCACCCACATACCAACACCATTCTTTGGGTC +
Preference number: 3 (lower is better)
Translates to: ERGTQKPTDQSE*DHPHTNTILWV
Trigger: GACCCAAAGAATGGTGTTGGTATGTGGGTGGTCCCACTCGCTTTGGTCAGTGGGCTTCTGGGTCCCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR TCA 72 bp TCTACCCTCTACAAAGCATCATGCCCGAATAGCAGCTaGGATAGGGTGCTCACGCCTCTCCACCCACACAGG +
Preference number: 3 (lower is better)
Translates to: STLYKASCPNSS*DRVLTPLHPHR
Trigger: CCTGTGTGGGTGGAGAGGCGTGAGCACCCTATCTCAGCTGCTATTCGGGCATGATGCTTTGTAGAGGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR GCA 72 bp AAGGACAGAGATGACCAAAGAGAGGTCCCCTGGCCCTaGCAGGGGTATGACAGCAGCAACTGGTTCACACAA +
Preference number: 3 (lower is better)
Translates to: KDRDDQREVPWP*QGYDSSNWFTQ
Trigger: TTGTGTGAACCAGTTGCTGCTGTCATACCCCTGGCAGGGCCAGGGGACCTCTCTTTGGTCATCTCTGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR GCA 72 bp TCTTCCCATCGTCTGCATGATAAGCCACAGACCCTCTaGTCCAGCCAGGGTGCCTGTTCTTGGGATAGTCCT +
Preference number: 3 (lower is better)
Translates to: SSHRLHDKPQTL*SSQGACSWDSP
Trigger: AGGACTATCCCAAGAACAGGCACCCTGGCTGGAGCAGAGGGTCTGTGGCTTATCATGCAGACGATGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR GCA 72 bp TGTAACAGCGTGGCCCAAAGGGGTCCCCCACACCACTaGCATGGAAGATCTTCCCATCGTCTGCATGATAAG +
Preference number: 3 (lower is better)
Translates to: CNSVAQRGPPHH*HGRSSHRLHDK
Trigger: CTTATCATGCAGACGATGGGAAGATCTTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGTTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR TCA 72 bp CCTTCCCTAAGTACTCCAGCAGAGTCCCACAGACTCTaGCATCATGTAGCCGGCCCCATTCATCCTCGTAAC +
Preference number: 3 (lower is better)
Translates to: PSLSTPAESHRL*HHVAGPIHPRN
Trigger: GTTACGAGGATGAATGGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTCTGCTGGAGTACTTAGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
3UTR CCA 72 bp TCTCTGGTCTGTACATACATTTCATACATCGTAGGGTaGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGCACA +
Preference number: 3 (lower is better)
Translates to: SLVCTYISYIVG*EARAKGRPSST
Trigger: TGTGCTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTATGTACAGACCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CCA 72 bp TGTAGCCAGGCCCATGGAACATATGATTCCCATCCCTaGCCCAACATTGGTCCACATCTCCCCATGAGCAAG +
Preference number: 3 (lower is better)
Translates to: CSQAHGTYDSHP*PNIGPHLPMSK
Trigger: CTTGCTCATGGGGAGATGTGGACCAATGTTGGGCCAGGGATGGGAATCATATGTTCCATGGGCCTGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR TCA 72 bp GTGGGGAGGACACATGTAAGTGCTAGAATCAAACACTaGAGCGAAACAGGCAACTGGCACAAGCAGCAAGCT +
Preference number: 3 (lower is better)
Translates to: VGRTHVSARIKH*SETGNWHKQQA
Trigger: AGCTTGCTGCTTGTGCCAGTTGCCTGTTTCGCTTCAGTGTTTGATTCTAGCACTTACATGTGTCCTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp GCTAAGGCTCTGGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCCCCAGAGCCAGGGAGGGGCCACGCTaGCCCTCTGGGCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AKALGSCPHAGRETGPRAREGPR*PSGLAQ
Trigger: CTGAGCAAGCCCAGAGGGGCAGCGTGGCCCCTCCCT...GGCTCTGGGGCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR TCA 90 bp CCCCAGAGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAGGCCCAGCTCAGCGTTaGGGTGCAGCCGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PQSLSPNTRELGTWVALVGPAQR*GAAAPP
Trigger: AGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCC...TACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCTCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp CCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGAGTGGGTGCCGGGCCTaGGCCAGCCCCACATCCACG +
Preference number: 4 (lower is better)
Translates to: PGACWVNEASGKSGTGCLSGCRA*ASPTST
Trigger: CGTGGATGTGGGGCTGGCCCAGGCCCGGCACCCACT...CAGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp CATGAGCAAGCTGCCTTCGGCTGCCCCCATCCAGCAGTCCTGTTCCTAGCCCAGCCCACACAGGGCCGGTaGGGGAAAGGGGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: HEQAAFGCPHPAVLFLAQPTQGR*GKGGPR
Trigger: TCTGGGTCCCCCTTTCCCTCACCGGCCCTGTGTGGG...CTGGGCTAGGAACAGGACTGCTGGATGGGGGCAGCCGAAGGCAGCTTGCTCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCAGGGAGGGGCCACGCTaGCCCTCTGGGCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCREGPR*PSGLAQ
Trigger: CTGAGCAAGCCCAGAGGGGCAGCGTGGCCCCTCCCT...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR TCA 90 bp CCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGCCAGTGGGGGCAGAGTaGCTACACACCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGACWVNEASGKSGTGCLPVGAE*LHTSRG
Trigger: GCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGG...CAGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR TCA 90 bp TCTGTGGTGCCTGAGCAGGTTGGGGTGGGGAGCCAGCTCTCAAGGGAAAGATGGAGCGTGACAGGGGCCTaGGCCAGTGGGGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVVPEQVGVGSQLSRERWSVTGA*ASGGRV
Trigger: CACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCT...CCATCTTTCCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAGGCACCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGAGCGTGACAGGGGCCTaGGCCAGTGGGGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVSVTGA*ASGGRV
Trigger: CACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCT...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp GCTAAGGCTCTGGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCCCCAGAGCCTGCCCGAATAGCAGCTaGGATAGGGTGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: AKALGSCPHAGRETGPRACPNSS*DRVLTP
Trigger: AGGCGTGAGCACCCTATCTCAGCTGCTATTCGGGCA...GGCTCTGGGGCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACAGCACAAGCAGCAAGCTaGGGCATGGGACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTAQAAS*GMGRGR
Trigger: CCTGCCCCGTCCCATGCCTCAGCTTGCTGCTTGTGC...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp CCCCAGAGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTACTGCCCCTCTGGGCTTaGTCAGCTAAGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PQSLSPNTRELGTWVALVLPLWA*SAKALG
Trigger: CCCCAGAGCCTTAGCTGAGCAAGCCCAGAGGGGCAG...TACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp GCTTGCTCAGCTAAGGCTCTGGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCAGGCACCCACCCATGTaGGTCCAGGTATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ACSAKALGSCPHAGRETGRHPPM*VQVWGA
Trigger: GGCTCCCCATACCTGGACCCACATGGGTGGGTGCCT...GCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGAGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp GCTTGCTCAGCTAAGGCTCTGGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCGCCACGCTGCCCCTCTaGGCTTGCTCAGCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: ACSAKALGSCPHAGRETGATLPL*ACSAKA
Trigger: AGCCTTAGCTGAGCAAGCCCAGAGGGGCAGCGTGGC...GCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGAGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR TCA 90 bp GCTCCAGCCAGGGTGCCTGTTCTTGGGATAGTCCTTCCGTGCCAGCCCCAGGGCAACTGTCCACCATCATaGCGCTGTCGTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: APARVPVLGIVLPCQPQGNCPPS*RCRPHG
Trigger: GCCGTGAGGACGACAGCGTCATGATGGTGGACAGTT...GCCCTGGGGCTGGCACGGAAGGACTATCCCAAGAACAGGCACCCTGGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR TCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGGGGCACAGAGAAGCGTaGCAGGGGCCTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVGHREA*QGPEPV
Trigger: CACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCCC...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp TCCAGCAGAGTCCCACAGACTCTGACATCATGTAGCCGGCCCCATTCATCCTCGAGTGGGTGCCGGGCCTaGGCCAGCCCCACATCCACG +
Preference number: 4 (lower is better)
Translates to: SSRVPQTLTSCSRPHSSSSGCRA*ASPTST
Trigger: CGTGGATGTGGGGCTGGCCCAGGCCCGGCACCCACT...CGAGGATGAATGGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp CCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGCCTCCAGGGGCCTGCTaGGTAAACGAAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGACWVNEASGKSGTGCLPPGAC*VNEASG
Trigger: CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG...CAGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CCA 90 bp GGAAAGATGGAGAGCCAGTGGGGGCAGAGTGACTACACACCTCCAGGGGCCTGCAGGCACCCACCCATGTaGGTCCAGGTATGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GKMESQWGQSDYTPPGACRHPPM*VQVWGA
Trigger: GGCTCCCCATACCTGGACCCACATGGGTGGGTGCCT...GCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGGCTCTCCATCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547257.1
CDS-3UTR CCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGTCTTGCCCTCACGCTaGCAGGGAGACAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPVLPSR*QGDRPQ
Trigger: CTGGGGCCTGTCTCCCTGCCAGCGTGAGGGCAAGAC...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp CAGGTCAGAAACGTGGGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGGCTCAGCTAAGGCTCTaGGGTCTTGCCCTCACGCTG +
Preference number: 4 (lower is better)
Translates to: QVRNVGTEKRDRGLSQWGAQLRL*GLALTL
Trigger: CAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGAGC...CCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCCCACGTTTCTGACCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp AGATGGAGAGCCAGTGGGGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGGCTCAGCTAAGGCTCTaGGGTCTTGCCCTCACGCTG +
Preference number: 4 (lower is better)
Translates to: RWRASGGRVTTHLQGPAGAQLRL*GLALTL
Trigger: CAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGAGC...CCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGGCTCTCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547257.1
CDS-3UTR TCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCCCGGAGTTGCACTTTaGCCCAAACTGGCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCPGVAL*PKLAAL
Trigger: AAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGG...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp AGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGCCCAGCTCAGCGTTaGGGTGCAGCCGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SDYTPPGACWVNEASGKSGPAQR*GAAAPP
Trigger: AGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCC...TGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCTCCTCACCCAGGGAGTaGATGCCCACTGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCSSPRE*MPTAGN
Trigger: GTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGA...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp TCTGCTCCAGCCAGGGTGCCTGTTCTTGGGATAGTCCTTCCGTGCCAGCCCCAGTCCTCACCCAGGGAGTaGATGCCCACTGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SAPARVPVLGIVLPCQPQSSPRE*MPTAGN
Trigger: GTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGA...CTGGGGCTGGCACGGAAGGACTATCCCAAGAACAGGCACCCTGGCTGGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp ACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACACCTAGCTCAGCGTTGAGGTaGAGCCGCACCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: TEKRDRGLSQWGQSDYTPSSALR*SRTSSP
Trigger: GGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCT...AGGTGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp GGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGGGGATAGTCCTTCCGTaGCAGCCCCAGGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: GQSDYTPPGACWVNEASGGIVLP*QPQGDV
Trigger: TACATCGCCCTGGGGCTGGCACGGAAGGACTATCCC...CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCAAGCTGCCTTCGGCTaGCCCCATCCAGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVQAAFG*PHPAVL
Trigger: CAGGACTGCTGGATGGGGGCAGCCGAAGGCAGCTTG...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp CCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGCCCTTTGTAACAGCGTaGCCCAAAGGGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PGACWVNEASGKSGTGCLPFVTA*PKGVPH
Trigger: GTGGGGGACCCCTTTGGGCCACGCTGTTACAAAGGG...CAGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp CGATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCTGCGGCCCAGCTCAGCGTTaGGGTGCAGCCGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RCSISLQGPRSPPRSSGCGPAQR*GAAAPP
Trigger: AGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCC...GCAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR TCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACAAACTGTCCACCATCATaGCGCTGTCGTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTNCPPS*RCRPHG
Trigger: GCCGTGAGGACGACAGCGTCATGATGGTGGACAGTT...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp TGCCAGCCCCAGGGCGATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAGTCCCACAGACTCTaGCATCATGTAGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: CQPQGDVAFLSRVHDLHLESHRL*HHVAGP
Trigger: GGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTC...GAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCGCCCTGGGGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR TCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACACCTGGTGCAGGTACATaGCATTCCGCACGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTPGAGT*HSARSG
Trigger: TCCGGAACGTGCGGAATGTCATGTACCTGCACCAGG...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp CTCAGGCCTGTAGCCAGGCCCATGGAACATATGATTCCCATCCCTGGCCCAACACCAGTGGGGGCAGAGTaGCTACACACCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRPVARPMEHMIPIPGPTPVGAE*LHTSRG
Trigger: GCCCCTGGAGGTGTGTAGTCACTCTGCCCCCACTGG...TGTTGGGCCAGGGATGGGAATCATATGTTCCATGGGCCTGGCTACAGGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp ACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACACCTGTCCACATCTCCCCATaGGCAAGCTGCCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: TEKRDRGLSQWGQSDYTPVHISP*ASCLRL
Trigger: CAGCCGAAGGCAGCTTGCTCATGGGGAGATGTGGAC...AGGTGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp CTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACGCCCCACAGCAATGGTaGCCCGGACTCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LHTSRGLLGKRSLWEVRNAPQQW*PGLHCP
Trigger: TGGACAGTGGAGTCCGGGGCACCATTGCTGTGGGGC...GTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACATCCGGTCCCCGGAGTTaGACTTTGACCCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTSGPRS*TLTQTG
Trigger: GCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGA...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCAGGACACAGGCTCAATaGCACAGCCAATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCRTQAQ*HSQSGP
Trigger: GGGACCGGATTGGCTGTGGCATTGAGCCTGTGTCCT...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCGGAGTGCATGCCCACTaGTGGGAACAGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCGVHAH*WEQSIW
Trigger: CCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCC...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp TGCCAGCCCCAGGGCGATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCCACCCAGGGAGTGCATaGCCACTGCTGGGAACAGTC +
Preference number: 4 (lower is better)
Translates to: CQPQGDVAFLSRVHDLHLHPGSA*PLLGTV
Trigger: GACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTG...GAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCGCCCTGGGGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTCACCCAGGGAGTGCATaGCCACTGCTGGGAACAGTC +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPHPGSA*PLLGTV
Trigger: GACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTG...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGTCCTCACCCAGGGAGTaGATGCCCACTGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVSSPRE*MPTAGN
Trigger: GTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGA...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp TGTAACAGCGTGGCCCAAAGGGGTCCCCCACACCACTGCCATGGAAGATCTTCCAGCTCAGCGTTGAGGTaGAGCCGCACCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: CNSVAQRGPPHHCHGRSSSSALR*SRTSSP
Trigger: GGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCT...GGAAGATCTTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGTTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGAAGTCAGGAACTGGGTaGCTGGCCCAGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVKSGTG*LAQQRV
Trigger: CACCCTCTGCTGGGCCAGGCACCCAGTTCCTGACTT...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR GCA 90 bp CATGAGCAAGCTGCCTTCGGCTGCCCCCATCCAGCAGTCCTGTTCCTAGCCCAGGCCCTACCCGCTCTGTaGAAACCAAGGCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: HEQAAFGCPHPAVLFLAQALPAL*KPRPTA
Trigger: AGCTGTTGGCCTTGGTTTGCACAGAGCGGGTAGGGC...CTGGGCTAGGAACAGGACTGCTGGATGGGGGCAGCCGAAGGCAGCTTGCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCGTGCATGCCCACTGCTaGGAACAGTCCATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCVHAHC*EQSIWG
Trigger: TCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCAC...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGAGGGGCCTGAGCCAGTaGGGGCAGAGTGACTACACA +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVRGLSQ*GQSDYT
Trigger: TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCT...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp ATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACAGCCCCTCTGAGCAGGTTGGGGTaGGGAGCCAGCTCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: MEGEKGVKALVPCHLTAPLSRLG*GASSQG
Trigger: CCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAG...AGGGGCTGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR TCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGAACTGTCCACCATCATaGCGCTGTCGTCCTCACGGC +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVNCPPS*RCRPHG
Trigger: GCCGTGAGGACGACAGCGTCATGATGGTGGACAGTT...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp CAGGTCAGAAACGTGGGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGGCCCCACATCCACGATaGTTTTGCCCTTCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: QVRNVGTEKRDRGLSQWGAPHPR*FCPSLS
Trigger: ACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGC...CCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCCCACGTTTCTGACCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACAGGTCCCCCACACCACTaGCATGGAAGATCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTGPPHH*HGRSSH
Trigger: ATGGGAAGATCTTCCATGGCAGTGGTGTGGGGGACC...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTACACCTCCAGGGGCCTaGTGGGTAAACGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPTPPGA*WVNEAS
Trigger: AGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGT...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR GCA 90 bp CATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGCACGCAGCTGAGATAGGGTaGTCACGCCTCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: HFIHRRVGSEGQREAQQHAAEIG*SRLSTH
Trigger: GTGGGTGGAGAGGCGTGAGCACCCTATCTCAGCTGC...GTGCTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp GTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCAGGTTGGGGTGGCTAGATCCTCTGTGGTaGCTGAGCAGGTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VWGARDLDPLWCLSRLGWLDPLW*LSRLGW
Trigger: CCACCCCAACCTGCTCAGGCACCACAGAGGATCTAG...CCACCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR GCA 90 bp ACCATTCTTTGGGTCCATTCCTGTCCAACCAGGGACTCAGGCCCAGGGACTGACAAGGCTCTGGGGTCTTaGCCTCACGCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TILWVHSCPTRDSGPGTDKALGS*PHAGRE
Trigger: CTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTT...GTCAGTCCCTGGGCCTGAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp TCACAGCCCCTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGAAGGCTCTGGGGTCTTaGCCTCACGCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQPLSLKHATGTHPCGSRKALGS*PHAGRE
Trigger: CTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTT...CCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAGGGGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTCAAACTGGCGGCCCTTaGCTCGGCCATTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPQTGGP*LGHCTA
Trigger: AGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTG...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACACAGGGTGCCTGTTCTTaGGATAGTCCTTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTQGACS*DSPSVP
Trigger: TGGCACGGAAGGACTATCCCAAGAACAGGCACCCTG...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp AGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCACCTCCAGGGGCCTGCTaGGTAAACGAAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SDYTPPGACWVNEASGKSPPGAC*VNEASG
Trigger: CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG...TGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CCA 90 bp CAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGATGGCCACGCTGCCCCTCTaGGCTTGCTCAGCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: QPQYPGARDMGGTGKERMATLPL*ACSAKA
Trigger: AGCCTTAGCTGAGCAAGCCCAGAGGGGCAGCGTGGC...CATCCTTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR TCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTCATCCATCTTGTTCATaGGAACAAACCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPHPSCS*EQTGAA
Trigger: GGCGGCCCCGGTTTGTTCTCATGAACAAGATGGATG...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp TACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTCCCGGAGTTGCACTTTaGCCCAAACTGGCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: YTPPGACWVNEASGKSGTPGVAL*PKLAAL
Trigger: AAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGG...AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp CTCAGGCCTGTAGCCAGGCCCATGGAACATATGATTCCCATCCCTGGCCCAACAGAGTCCCACAGACTCTaGCATCATGTAGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRPVARPMEHMIPIPGPTESHRL*HHVAGP
Trigger: GGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTC...TGTTGGGCCAGGGATGGGAATCATATGTTCCATGGGCCTGGCTACAGGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp TACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGAGTCCCACAGACTCTaGCATCATGTAGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: YTPPGACWVNEASGKSGTESHRL*HHVAGP
Trigger: GGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTC...AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp TCAGCTAAGGCTCTGGGGTCTTGCCCTCACGCTGGCAGGGAGACAGGCCCCAGATCTTGCCATTCCGAGTaGAGAAAACCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SAKALGSCPHAGRETGPRSCHSE*RKPPPS
Trigger: GGAAGGTGGTGGTTTTCTTCACTCGGAATGGCAAGA...TCTGGGGCCTGTCTCCCTGCCAGCGTGAGGGCAAGACCCCAGAGCCTTAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR TCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACAGGTGCAGATCTACTTTaGCTTTCTCCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTGADLL*LSPRSS
Trigger: TGAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACC...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp TACATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGGGGCACAGAGAAGCGTaGCAGGGGCCTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: YIHFIHRRVGSEGQREAQGHREA*QGPEPV
Trigger: CACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCCC...CTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp CATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGCACGGAGAAATACCATGGTaGGTAGGGGAGGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HFIHRRVGSEGQREAQQHGEIPW*VGEGAV
Trigger: GACAGCCCCCTCCCCTACTCACCATGGTATTTCTCC...GTGCTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp CCCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGTCCCACAGGCCCCACAGCAATGGTaGCCCGGACTCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PTSTMLLPFPKYSSRVPQAPQQW*PGLHCP
Trigger: TGGACAGTGGAGTCCGGGGCACCATTGCTGTGGGGC...CTGTGGGACTCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp ATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACAGCCCCTGGAGTGCATGCCCACTaGTGGGAACAGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: MEGEKGVKALVPCHLTAPGVHAH*WEQSIW
Trigger: CCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCC...AGGGGCTGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp AGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAACACCCAGGGAGTGCATaGCCACTGCTGGGAACAGTC +
Preference number: 4 (lower is better)
Translates to: SLSPNTRELGTWVALVKKHPGSA*PLLGTV
Trigger: GACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTG...TTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp TCTGCTCCAGCCAGGGTGCCTGTTCTTGGGATAGTCCTTCCGTGCCAGCCCCAGGCCCCACATCCACGATaGTTTTGCCCTTCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: SAPARVPVLGIVLPCQPQAPHPR*FCPSLS
Trigger: ACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGC...CTGGGGCTGGCACGGAAGGACTATCCCAAGAACAGGCACCCTGGCTGGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp AGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGGATAGTCCTTCCGTaGCAGCCCCAGGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: SLSPNTRELGTWVALVKKGIVLP*QPQGDV
Trigger: TACATCGCCCTGGGGCTGGCACGGAAGGACTATCCC...TTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp TCACAGCCCCTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGAAGTCAGGAACTGGGTaGCTGGCCCAGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SQPLSLKHATGTHPCGSRKSGTG*LAQQRV
Trigger: CACCCTCTGCTGGGCCAGGCACCCAGTTCCTGACTT...CCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAGGGGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp GATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCTGCGCCAGCCCCACAGCAATaGTGCCCCGGACTCCACTGT +
Preference number: 4 (lower is better)
Translates to: DVAFLSRVHDLHLEVVAAPAPQQ*CPGLHC
Trigger: ACAGTGGAGTCCGGGGCACCATTGCTGTGGGGCTGG...CGCAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp ACTCTACCCTCTACAAAGCATCATGCCCGAATAGCAGCTGAGATAGGGTGCTCAAGTGGGTGCCGGGCCTaGGCCAGCCCCACATCCACG +
Preference number: 4 (lower is better)
Translates to: TLPSTKHHARIAAEIGCSSGCRA*ASPTST
Trigger: CGTGGATGTGGGGCTGGCCCAGGCCCGGCACCCACT...TGAGCACCCTATCTCAGCTGCTATTCGGGCATGATGCTTTGTAGAGGGTAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp GCCTGTTCTTGGGATAGTCCTTCCGTGCCAGCCCCAGGGCGATGTAGCATTTCTCCCTTTGTAACAGCGTaGCCCAAAGGGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ACSWDSPSVPAPGRCSISPFVTA*PKGVPH
Trigger: GTGGGGGACCCCTTTGGGCCACGCTGTTACAAAGGG...AGAAATGCTACATCGCCCTGGGGCTGGCACGGAAGGACTATCCCAAGAACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp CCCCAGAGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTATCAGCATTCCAATGGTaGGGAAGAAGCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PQSLSPNTRELGTWVALVSAFQW*GRSLQK
Trigger: CTTCTGGAGGCTTCTTCCCCACCATTGGAATGCTGA...TACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCAGCTCAGCATTCCAATaGTGGGGAAGAAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCSSAFQ*WGRSLQ
Trigger: CTGGAGGCTTCTTCCCCACCATTGGAATGCTGAGCT...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CCA 90 bp GGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGGGTAAACGAAGCCTCTaGGAAGTCAGGAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: GQSDYTPPGACWVNEASGGKRSL*EVRNWV
Trigger: CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACC...CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CCA 90 bp CAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGATGGAAGGGCCTCCAGGGGCCTGCTaGGTAAACGAAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QYPGARDMGGTGKERMEGPPGAC*VNEASG
Trigger: CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG...CCCTTCCATCCTTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp TACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTAGGGGCCTGAGCCAGTaGGGGCAGAGTGACTACACA +
Preference number: 4 (lower is better)
Translates to: YTPPGACWVNEASGKSGTRGLSQ*GQSDYT
Trigger: TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCT...AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp ATGTGGGTCCAGGTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCGACCTAGATCCTCTGTaGTGCCTGAGCAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: MWVQVWGARDLDPLWCLSDLDPL*CLSRLG
Trigger: CCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTC...GCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATACCTGGACCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp CCACCCACATACCAACACCATTCTTTGGGTCCATTCCTGTCCAACCAGGGACTCGTCTTGCCCTCACGCTaGCAGGGAGACAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPTYQHHSLGPFLSNQGLVLPSR*QGDRPQ
Trigger: CTGGGGCCTGTCTCCCTGCCAGCGTGAGGGCAAGAC...GAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACAACCGGTAGTGCAGGTTaGGGTCATCCATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTTGSAG*GHPSCS
Trigger: TGAACAAGATGGATGACCTCAACCTGCACTACCGGT...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGGGTGCAGATCTACTTTaGCTTTCTCCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVGADLL*LSPRSS
Trigger: TGAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACC...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR GCA 90 bp ACCTCACAGCCCCTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCTCCGGTCCCCGGAGTTaGACTTTGACCCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: TSQPLSLKHATGTHPCGSSGPRS*TLTQTG
Trigger: GCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGA...GGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAGGGGCTGTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp TACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTAGGACACAGGCTCAATaGCACAGCCAATCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: YTPPGACWVNEASGKSGTRTQAQ*HSQSGP
Trigger: GGGACCGGATTGGCTGTGGCATTGAGCCTGTGTCCT...AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTAAGATCTGGGCGGTCTaGACATCAAAGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPKIWAV*TSKDTG
Trigger: GCCTGTGTCCTTTGATGTGCAGACCGCCCAGATCTT...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp TACATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGAGCTCAGCGTTGAGGTaGAGCCGCACCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: YIHFIHRRVGSEGQREAQSSALR*SRTSSP
Trigger: GGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCT...CTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGGCCCCACATCCACGATaGTTTTGCCCTTCCCTAAGT +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVAPHPR*FCPSLS
Trigger: ACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGC...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp CGATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCTGCGGGATAGTCCTTCCGTaGCAGCCCCAGGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: RCSISLQGPRSPPRSSGCGIVLP*QPQGDV
Trigger: TACATCGCCCTGGGGCTGGCACGGAAGGACTATCCC...GCAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp CATGAGCAAGCTGCCTTCGGCTGCCCCCATCCAGCAGTCCTGTTCCTAGCCCAGGATCTTCCCATCGTCTaGATGATAAGCCACAGACCC +
Preference number: 4 (lower is better)
Translates to: HEQAAFGCPHPAVLFLAQDLPIV*MISHRP
Trigger: GGGTCTGTGGCTTATCATGCAGACGATGGGAAGATC...CTGGGCTAGGAACAGGACTGCTGGATGGGGGCAGCCGAAGGCAGCTTGCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTTCTTCCCCTTCCTGGTaGAGGTACATGACATTCCGC +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPSSPSW*RYMTFR
Trigger: GCGGAATGTCATGTACCTGCACCAGGAAGGGGAAGA...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp CAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGATGACACCTCCAGGGGCCTaGTGGGTAAACGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QPQYPGARDMGGTGKERMTPPGA*WVNEAS
Trigger: AGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGT...CATCCTTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTTGGGAACAGTCCATCTaGGGACATGGGCATGATGGT +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPWEQSI*GHGHDG
Trigger: ACCATCATGCCCATGTCCCCAGATGGACTGTTCCCA...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp CAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGATGGTGCATGCCCACTGCTaGGAACAGTCCATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QPQYPGARDMGGTGKERMVHAHC*EQSIWG
Trigger: TCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCAC...CATCCTTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp CTTTGTAACAGCGTGGCCCAAAGGGGTCCCCCACACCACTGCCATGGAAGATCTGTGCATGCCCACTGCTaGGAACAGTCCATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LCNSVAQRGPPHHCHGRSVHAHC*EQSIWG
Trigger: TCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCAC...AGATCTTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGTTACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp CATGTGGGTCCAGGTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCAGGGTGCCTGTTCTTaGGATAGTCCTTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: HVGPGMGSQRPRSSVVPEQGACS*DSPSVP
Trigger: TGGCACGGAAGGACTATCCCAAGAACAGGCACCCTG...CTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATACCTGGACCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp ATAGTCCTTCCGTGCCAGCCCCAGGGCGATGTAGCATTTCTCTCCAGGGTCCACCAGGGTGCCTGTTCTTaGGATAGTCCTTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: IVLPCQPQGDVAFLSRVHQGACS*DSPSVP
Trigger: TGGCACGGAAGGACTATCCCAAGAACAGGCACCCTG...GTGGACCCTGGAGAGAAATGCTACATCGCCCTGGGGCTGGCACGGAAGGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCTCCTCTTCCCCTTCCTaGTGCAGGTACATGACATTC +
Preference number: 4 (lower is better)
Translates to: PPGACWVNEASGKSGTGCSSSPS*CRYMTF
Trigger: GAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGA...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGGGTAAACGAAGCCTCTaGGAAGTCAGGAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVGKRSL*EVRNWV
Trigger: CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACC...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CCA 90 bp GTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCAGGTTGGGGTGGACCAGGTCAGAAACGTaGGCACAGAGAAGCGTGACA +
Preference number: 4 (lower is better)
Translates to: VWGARDLDPLWCLSRLGWTRSET*AQRSVT
Trigger: TGTCACGCTTCTCTGTGCCCACGTTTCTGACCTGGT...CCACCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp CCCCAGAGCCTCAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAACCAACACCATTCTTTaGGTCCATTCCTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: PQSLSPNTRELGTWVALVTNTIL*VHSCPT
Trigger: GGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGT...TACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTGAGGCTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp GTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCAGGTTGGGGTGGACTGACCAAAGCGAGTaGGACCACCCACATACCAAC +
Preference number: 4 (lower is better)
Translates to: VWGARDLDPLWCLSRLGWTDQSE*DHPHTN
Trigger: GTTGGTATGTGGGTGGTCCCACTCGCTTTGGTCAGT...CCACCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp TACATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCTGAGCAGGTTGGGGTaGGGAGCCAGCTCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: YIHFIHRRVGSEGQREAQLSRLG*GASSQG
Trigger: CCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAG...CTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp GCCTGTAGCCAGGCCCATGGAACATATGATTCCCATCCCTGGCCCAACATTGGTCAGCAAGCTGAGGCATaGGACGGGGCAGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: ACSQAHGTYDSHPWPNIGQQAEA*DGAGKG
Trigger: CCCTTTTCCTGCCCCGTCCCATGCCTCAGCTTGCTG...ACCAATGTTGGGCCAGGGATGGGAATCATATGTTCCATGGGCCTGGCTACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGAGCGAAACAGGCAACTaGCACAAGCAGCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVSETGN*HKQQAE
Trigger: CTCAGCTTGCTGCTTGTGCCAGTTGCCTGTTTCGCT...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp ATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACAGCCCCTTCCCTGGCCCAACATTaGTCCACATCTCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: MEGEKGVKALVPCHLTAPSLAQH*STSPHE
Trigger: CTCATGGGGAGATGTGGACCAATGTTGGGCCAGGGA...AGGGGCTGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp CTGTGGTGCCTGAGCAGGTTGGGGTGGGGAGCCAGCTCTCAAGGGAAAGATGGAAAGATGGAGAGCCAGTaGGGGCAGAGTGACTACACA +
Preference number: 4 (lower is better)
Translates to: LWCLSRLGWGASSQGKDGKMESQ*GQSDYT
Trigger: TGTGTAGTCACTCTGCCCCCACTGGCTCTCCATCTT...TCCATCTTTCCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAGGCACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547257.1
CDS-3UTR CCA 90 bp ATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACAGCCCCTCTCTCAAGGGAAAGATaGAGAGCCAGTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MEGEKGVKALVPCHLTAPLSRER*RASGGR
Trigger: TCTGCCCCCACTGGCTCTCCATCTTTCCCTTGAGAG...AGGGGCTGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547257.1
CDS-3UTR TCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGCTTCCCATTTTTGGTaGAGAAGATCTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPASHFW*RRSGRS
Trigger: AGACCGCCCAGATCTTCTTCACCAAAAATGGGAAGC...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp GCCTGTAGCCAGGCCCATGGAACATATGATTCCCATCCCTGGCCCAACATTGGTCCTGGTGCAGGTACATaGCATTCCGCACGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: ACSQAHGTYDSHPWPNIGPGAGT*HSARSG
Trigger: TCCGGAACGTGCGGAATGTCATGTACCTGCACCAGG...ACCAATGTTGGGCCAGGGATGGGAATCATATGTTCCATGGGCCTGGCTACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTTCTTGCCATTCCGAGTaGAGAAAACCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPSCHSE*RKPPPS
Trigger: GGAAGGTGGTGGTTTTCTTCACTCGGAATGGCAAGA...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR TCA 90 bp ATGTGGGTCCAGGTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCGGTGCAGATCTACTTTaGCTTTCTCCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: MWVQVWGARDLDPLWCLSGADLL*LSPRSS
Trigger: TGAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACC...GCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATACCTGGACCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR GCA 90 bp GATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCTGCGGGAGTGCATGCCCACTaGTGGGAACAGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: DVAFLSRVHDLHLEVVAAGVHAH*WEQSIW
Trigger: CCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCC...CGCAGCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGATCTTCCCATCGTCTaGATGATAAGCCACAGACCC +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPDLPIV*MISHRP
Trigger: GGGTCTGTGGCTTATCATGCAGACGATGGGAAGATC...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp TGGGCCAGCCCCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGGTCCCCCACACCACTaGCATGGAAGATCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: WASPTSTMLLPFPKYSSRGPPHH*HGRSSH
Trigger: ATGGGAAGATCTTCCATGGCAGTGGTGTGGGGGACC...TCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGCTGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp CTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGTATGGGGAGCCAGGCCAACAGCTCCTGCTaGCTCTTCCTCCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLNMQQAPTHVGPGMGSQANSSC*LFLPGK
Trigger: TTTTCCAGGGAGGAAGAGGCAGCAGGAGCTGTTGGC...CTGGCTCCCCATACCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp GAAAGGATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACACAAACTGGCGGCCCTTaGCTCGGCCATTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: ERMEGEKGVKALVPCHLTQTGGP*LGHCTA
Trigger: AGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTG...TGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCATCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp GGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGTTGGTGAAGAAGATCTaGGCGGTCTGCACATCAAAG +
Preference number: 4 (lower is better)
Translates to: GQSDYTPPGACWVNEASGLVKKI*AVCTSK
Trigger: CTTTGATGTGCAGACCGCCCAGATCTTCTTCACCAA...CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp CCACCCACATACCAACACCATTCTTTGGGTCCATTCCTGTCCAACCAGGGACTCCCCTTTGTAACAGCGTaGCCCAAAGGGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PPTYQHHSLGPFLSNQGLPFVTA*PKGVPH
Trigger: GTGGGGGACCCCTTTGGGCCACGCTGTTACAAAGGG...GAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTTCCTCTTCCCCTTCCTaGTGCAGGTACATGACATTC +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPSSSPS*CRYMTF
Trigger: GAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGA...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTTCAGCATTCCAATGGTaGGGAAGAAGCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPSAFQW*GRSLQK
Trigger: CTTCTGGAGGCTTCTTCCCCACCATTGGAATGCTGA...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CCA 90 bp ATGTGGGTCCAGGTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCGGTAAACGAAGCCTCTaGGAAGTCAGGAACTGGGTG +
Preference number: 4 (lower is better)
Translates to: MWVQVWGARDLDPLWCLSGKRSL*EVRNWV
Trigger: CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACC...GCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATACCTGGACCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp CCACCCACATACCAACACCATTCTTTGGGTCCATTCCTGTCCAACCAGGGACTCCAAAGAGAGGTCCCCTaGCCCTGCCAGGGGTATGAC +
Preference number: 4 (lower is better)
Translates to: PPTYQHHSLGPFLSNQGLQREVP*PCQGYD
Trigger: GTCATACCCCTGGCAGGGCCAGGGGACCTCTCTTTG...GAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
3UTR CAA 72 bp AAGCGAGTGGGACCACCCACATACCAACACCATTCTTaGGGTCCATTCCTGTCCAACCAGGGACTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KRVGPPTYQHHS*GPFLSNQGLRP
Trigger: GGGCCTGAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGGTCCCACTCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp CCCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGTCCCACAGCATCCATCTTGTTCATaGGAACAAACCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PTSTMLLPFPKYSSRVPQHPSCS*EQTGAA
Trigger: GGCGGCCCCGGTTTGTTCTCATGAACAAGATGGATG...CTGTGGGACTCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR TCA 90 bp TCACAGCCCCTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGGTGAAAGGACAGAGATaGCCAAAGAGAGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SQPLSLKHATGTHPCGSRVKGQR*PKRGPL
Trigger: CAGGGGACCTCTCTTTGGTCATCTCTGTCCTTTCAC...CCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAGGGGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp CTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGTATGGGGAGCCAGAAGATCTGGGCGGTCTaGACATCAAAGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: LLNMQQAPTHVGPGMGSQKIWAV*TSKDTG
Trigger: GCCTGTGTCCTTTGATGTGCAGACCGCCCAGATCTT...CTGGCTCCCCATACCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCATCCACGATGCTTTTaGCCTTCCCTAAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVHPRCF*PSLSTP
Trigger: TGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATG...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp CCTTCCGTGCCAGCCCCAGGGCGATGTAGCATTTCTCTCCAGGGTCCACGATCTCATCCACGATGCTTTTaGCCTTCCCTAAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: PSVPAPGRCSISLQGPRSHPRCF*PSLSTP
Trigger: TGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATG...AGATCGTGGACCCTGGAGAGAAATGCTACATCGCCCTGGGGCTGGCACGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp AGAAAGGATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACGGTCCCCCACACCACTaGCATGGAAGATCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RKDGRGERSEGPSALSPHGPPHH*HGRSSH
Trigger: ATGGGAAGATCTTCCATGGCAGTGGTGTGGGGGACC...GTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCATCCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp ACCATTCTTTGGGTCCATTCCTGTCCAACCAGGGACTCAGGCCCAGGGACTGACTCTTCCCCTTCCTGGTaGAGGTACATGACATTCCGC +
Preference number: 4 (lower is better)
Translates to: TILWVHSCPTRDSGPGTDSSPSW*RYMTFR
Trigger: GCGGAATGTCATGTACCTGCACCAGGAAGGGGAAGA...GTCAGTCCCTGGGCCTGAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp AACACTTATTCACAGGAAGGTCAAAGCCTCATCTCCCAGGGGACGTATCTGTGCCTGCCCCTCTGGGCTTaGTCAGCTAAGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NTYSQEGQSLISQGTYLCLPLWA*SAKALG
Trigger: CCCCAGAGCCTTAGCTGAGCAAGCCCAGAGGGGCAG...GCACAGATACGTCCCCTGGGAGATGAGGCTTTGACCTTCCTGTGAATAAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp ACTCTACCCTCTACAAAGCATCATGCCCGAATAGCAGCTGAGATAGGGTGCTCACCAGCCCCACAGCAATaGTGCCCCGGACTCCACTGT +
Preference number: 4 (lower is better)
Translates to: TLPSTKHHARIAAEIGCSPAPQQ*CPGLHC
Trigger: ACAGTGGAGTCCGGGGCACCATTGCTGTGGGGCTGG...TGAGCACCCTATCTCAGCTGCTATTCGGGCATGATGCTTTGTAGAGGGTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp TCTGTGGTGCCTGAGCAGGTTGGGGTGGGGAGCCAGCTCTCAAGGGAAAGATGGTTGGTGAAGAAGATCTaGGCGGTCTGCACATCAAAG +
Preference number: 4 (lower is better)
Translates to: SVVPEQVGVGSQLSRERWLVKKI*AVCTSK
Trigger: CTTTGATGTGCAGACCGCCCAGATCTTCTTCACCAA...CCATCTTTCCCTTGAGAGCTGGCTCCCCACCCCAACCTGCTCAGGCACCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp TCACAGCCCCTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGAGCTCAGCATTCCAATaGTGGGGAAGAAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQPLSLKHATGTHPCGSRSSAFQ*WGRSLQ
Trigger: CTGGAGGCTTCTTCCCCACCATTGGAATGCTGAGCT...CCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAGGGGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS-3UTR CCA 90 bp TACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTAGCTCAGCATTCCAATaGTGGGGAAGAAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YTPPGACWVNEASGKSGTSSAFQ*WGRSLQ
Trigger: CTGGAGGCTTCTTCCCCACCATTGGAATGCTGAGCT...AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CCA 90 bp GAAAGGATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACATCATACATCGTAGGGTaGGAAGCGAGGGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ERMEGEKGVKALVPCHLTSYIVG*EARAKG
Trigger: CCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGA...TGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCATCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp TACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTACCGGTAGTGCAGGTTaGGGTCATCCATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: YTPPGACWVNEASGKSGTTGSAG*GHPSCS
Trigger: TGAACAAGATGGATGACCTCAACCTGCACTACCGGT...AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp CTTTGTAACAGCGTGGCCCAAAGGGGTCCCCCACACCACTGCCATGGAAGATCTACCGGTAGTGCAGGTTaGGGTCATCCATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LCNSVAQRGPPHHCHGRSTGSAG*GHPSCS
Trigger: TGAACAAGATGGATGACCTCAACCTGCACTACCGGT...AGATCTTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGTTACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR TCA 90 bp AGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCATGTTTGAACCTCTCCTaGTATCGGAAAGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: SDYTPPGACWVNEASGKSCLNLS*YRKART
Trigger: GGTCCGAGCTTTCCGATATCAGGAGAGGTTCAAACA...TGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp CCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTGCTACAAGGATATGTTTaGACCTCTCCTGATATCGGA +
Preference number: 4 (lower is better)
Translates to: PGACWVNEASGKSGTGCLLQGYV*TSPDIG
Trigger: TCCGATATCAGGAGAGGTTCAAACATATCCTTGTAG...CAGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR TCA 90 bp CAGCCCCAATACCCGGGAGCTAGGGACATGGGTGGCACTGGTAAAGAAAGGATGGCTTCCCATTTTTGGTaGAGAAGATCTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: QPQYPGARDMGGTGKERMASHFW*RRSGRS
Trigger: AGACCGCCCAGATCTTCTTCACCAAAAATGGGAAGC...CATCCTTTCTTTACCAGTGCCACCCATGTCCCTAGCTCCCGGGTATTGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp GGAGTCAACACTTATTCACAGGAAGGTCAAAGCCTCATCTCCCAGGGGACGTATGACCCAGAAGCCCACTaGCCAAAGCGAGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: GVNTYSQEGQSLISQGTYDPEAH*PKRVGP
Trigger: TGGTCCCACTCGCTTTGGTCAGTGGGCTTCTGGGTC...ATACGTCCCCTGGGAGATGAGGCTTTGACCTTCCTGTGAATAAGTGTTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp ATGTGGGTCCAGGTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCGCTAGAATCAAACACTaGAGCGAAACAGGCAACTGG +
Preference number: 4 (lower is better)
Translates to: MWVQVWGARDLDPLWCLSARIKH*SETGNW
Trigger: CCAGTTGCCTGTTTCGCTTCAGTGTTTGATTCTAGC...GCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATACCTGGACCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp GCAGCACAACAGCTCACCCGCTTTCCCTACAGCCCTACCCGCTCTGTGCAAACCACACCTCAAAATAATTaGTGTCCTTGGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: AAQQLTRFPYSPTRSVQTTPQNN*CPWSGV
Trigger: GACCCCTGACCAAGGACAGCAATTATTTTGAGGTGT...GGTTTGCACAGAGCGGGTAGGGCTGTAGGGAAAGCGGGTGAGCTGTTGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp TGGGCCAGCCCCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGATCTTCCCATCGTCTaGATGATAAGCCACAGACCC +
Preference number: 4 (lower is better)
Translates to: WASPTSTMLLPFPKYSSRDLPIV*MISHRP
Trigger: GGGTCTGTGGCTTATCATGCAGACGATGGGAAGATC...TCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp CCCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGTCCCACAGTGGGAACAGTCCATCTaGGGACATGGGCATGATGGT +
Preference number: 4 (lower is better)
Translates to: PTSTMLLPFPKYSSRVPQWEQSI*GHGHDG
Trigger: ACCATCATGCCCATGTCCCCAGATGGACTGTTCCCA...CTGTGGGACTCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR TCA 90 bp ATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGTCTTGCCATTCCGAGTaGAGAAAACCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: IHFIHRRVGSEGQREAQQSCHSE*RKPPPS
Trigger: GGAAGGTGGTGGTTTTCTTCACTCGGAATGGCAAGA...CTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp AGTGGACTAGAAAGGCTCCTGGTTCCGGCCATACTGATAAATACGGAAACTCCAGCCCTGCCAGGGGTATaGCAGCAGCAACTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SGLERLLVPAILINTETPALPGV*QQQLVH
Trigger: GTGAACCAGTTGCTGCTGTCATACCCCTGGCAGGGC...TGGAGTTTCCGTATTTATCAGTATGGCCGGAACCAGGAGCCTTTCTAGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp CTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACACACCTCAAAATAATTaGTGTCCTTGGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LHTSRGLLGKRSLWEVRNTPQNN*CPWSGV
Trigger: GACCCCTGACCAAGGACAGCAATTATTTTGAGGTGT...GTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR GCA 90 bp AGCCCCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGTCCCAATGGTAGAGCCCACTTaGCATCATCAGCATGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPTSTMLLPFPKYSSRVPMVEPT*HHQHGR
Trigger: CCTACCATGCTGATGATGGCAAGTGGGCTCTACCAT...TGGGACTCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp GCCTGTTCTTGGGATAGTCCTTCCGTGCCAGCCCCAGGGCGATGTAGCATTTCTAATAATTGCTGTCCTTaGTCAGGGGTCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ACSWDSPSVPAPGRCSISNNCCP*SGVEKP
Trigger: TGGCTTCTCGACCCCTGACCAAGGACAGCAATTATT...AGAAATGCTACATCGCCCTGGGGCTGGCACGGAAGGACTATCCCAAGAACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp AGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAAATAATTGCTGTCCTTaGTCAGGGGTCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SDYTPPGACWVNEASGKSNNCCP*SGVEKP
Trigger: TGGCTTCTCGACCCCTGACCAAGGACAGCAATTATT...TGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CCA 90 bp CCACCCACATACCAACACCATTCTTTGGGTCCATTCCTGTCCAACCAGGGACTCTGGGAACAGTCCATCTaGGGACATGGGCATGATGGT +
Preference number: 4 (lower is better)
Translates to: PPTYQHHSLGPFLSNQGLWEQSI*GHGHDG
Trigger: ACCATCATGCCCATGTCCCCAGATGGACTGTTCCCA...GAGTCCCTGGTTGGACAGGAATGGACCCAAAGAATGGTGTTGGTATGTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp AACACTTATTCACAGGAAGGTCAAAGCCTCATCTCCCAGGGGACGTATCTGTGCGACCTAGATCCTCTGTaGTGCCTGAGCAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: NTYSQEGQSLISQGTYLCDLDPL*CLSRLG
Trigger: CCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTC...GCACAGATACGTCCCCTGGGAGATGAGGCTTTGACCTTCCTGTGAATAAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp TACATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCTGTTCCTAGCCCAGTaGACTAGAAAGGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: YIHFIHRRVGSEGQREAQLFLAQ*TRKAPG
Trigger: ACCAGGAGCCTTTCTAGTCCACTGGGCTAGGAACAG...CTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp CCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGTCCCACAGATGTTTGAACCTCTCCTaGTATCGGAAAGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: PHPRCFCPSLSTPAESHRCLNLS*YRKART
Trigger: GGTCCGAGCTTTCCGATATCAGGAGAGGTTCAAACA...TCTGTGGGACTCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CCA 90 bp CTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGTATGGGGAGTATGATTCCCATCCCTaGCCCAACATTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LSLKHATGTHPCGSRYGEYDSHP*PNIGPH
Trigger: ATGTGGACCAATGTTGGGCCAGGGATGGGAATCATA...CTCCCCATACCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp TGGGCCAGCCCCACATCCACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGACTACAAGGATATGTTTaGACCTCTCCTGATATCGGA +
Preference number: 4 (lower is better)
Translates to: WASPTSTMLLPFPKYSSRLQGYV*TSPDIG
Trigger: TCCGATATCAGGAGAGGTTCAAACATATCCTTGTAG...TCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGTGGGGCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR TCA 90 bp GAAAGGATGGAAGGGGAGAAAGGAGTGAAGGCCCTAGTGCCCTGTCACCTCACACTACAAGGATATGTTTaGACCTCTCCTGATATCGGA +
Preference number: 4 (lower is better)
Translates to: ERMEGEKGVKALVPCHLTLQGYV*TSPDIG
Trigger: TCCGATATCAGGAGAGGTTCAAACATATCCTTGTAG...TGTGAGGTGACAGGGCACTAGGGCCTTCACTCCTTTCTCCCCTTCCATCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR GCA 90 bp ACGATGCTTTTGCCCTTCCCTAAGTACTCCAGCAGAGTCCCACAGACTCTGACAACACCTCAAAATAATTaGTGTCCTTGGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: TMLLPFPKYSSRVPQTLTTPQNN*CPWSGV
Trigger: GACCCCTGACCAAGGACAGCAATTATTTTGAGGTGT...TGTCAGAGTCTGTGGGACTCTGCTGGAGTACTTAGGGAAGGGCAAAAGCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR GCA 90 bp ACTTTAGCCGAAATTGGAGTCAACACTTATTCACAGGAAGGTCAAAGCCTCATCACACCTCCAGGGGCCTaGTGGGTAAACGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TLAEIGVNTYSQEGQSLITPPGA*WVNEAS
Trigger: AGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGT...GATGAGGCTTTGACCTTCCTGTGAATAAGTGTTGACTCCAATTTCGGCTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp TCACCTCACAGCCCCTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTAACTTTAGCCGAAATTaGAGTCAACACTTATTCACA +
Preference number: 4 (lower is better)
Translates to: SPHSPSLLNMQQAPTHVGNFSRN*SQHLFT
Trigger: TGTGAATAAGTGTTGACTCCAATTTCGGCTAAAGTT...ACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAGGGGCTGTGAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR TCA 90 bp ACTTTAGCCGAAATTGGAGTCAACACTTATTCACAGGAAGGTCAAAGCCTCATCTGTTTGAACCTCTCCTaGTATCGGAAAGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: TLAEIGVNTYSQEGQSLICLNLS*YRKART
Trigger: GGTCCGAGCTTTCCGATATCAGGAGAGGTTCAAACA...GATGAGGCTTTGACCTTCCTGTGAATAAGTGTTGACTCCAATTTCGGCTAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CCA 90 bp ACTTTAGCCGAAATTGGAGTCAACACTTATTCACAGGAAGGTCAAAGCCTCATCAATAATTGCTGTCCTTaGTCAGGGGTCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLAEIGVNTYSQEGQSLINNCCP*SGVEKP
Trigger: TGGCTTCTCGACCCCTGACCAAGGACAGCAATTATT...GATGAGGCTTTGACCTTCCTGTGAATAAGTGTTGACTCCAATTTCGGCTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CAA 90 bp GGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGCGGCCCAGCTCAGCGTaGAGGTGCAGCCGCACCTCC +
Preference number: 5 (lower is better)
Translates to: GQSDYTPPGACWVNEASGRPSSA*RCSRTS
Trigger: GGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCG...CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS GCA 90 bp ACCATCATGACGCTGTCGTCCTCACGGCCCAGCTCAGCGTTGAGGTaGAGCCGCACCTCCTCACCCAGGGAGTGCATGCCCACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TIMTLSSSRPSSALR*SRTSSPRECMPTAG
Trigger: CCCAGCAGTGGGCATGCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCGTGAGGACGACAGCGTCATGATGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS-3UTR CAA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTCGGCCCAGCTCAGCGTaGAGGTGCAGCCGCACCTCC +
Preference number: 5 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPRPSSA*RCSRTS
Trigger: GGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCG...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS CCA 90 bp GAGGTGCAGCCGCACCTCCTCACCCAGGGAGTGCATGCCCACTGCTaGGAACAGTCCATCTGGGGACATGGGCATGATGGTAGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: EVQPHLLTQGVHAHC*EQSIWGHGHDGRAH
Trigger: GTGGGCTCTACCATCATGCCCATGTCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS-3UTR CAA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCCAAACTGGCGGCCCTaGGCTCGGCCATTGTACAGC +
Preference number: 5 (lower is better)
Translates to: PPGACWVNEASGKSGTGCPNWRP*ARPLYS
Trigger: GCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGG...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CAA 90 bp GGGCGATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCGAAGTAGTGGCCGGCCCAGCTCAGCGTaGAGGTGCAGCCGCACCTCC +
Preference number: 5 (lower is better)
Translates to: GRCSISLQGPRSPPRSSGRPSSA*RCSRTS
Trigger: GGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCG...GCCACTACTTCGAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS GCA 90 bp GTTGAGGTGCAGCCGCACCTCCTCACCCAGGGAGTGCATGCCCACTaGTGGGAACAGTCCATCTGGGGACATGGGCATGATGGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: VEVQPHLLTQGVHAH*WEQSIWGHGHDGRA
Trigger: GGCTCTACCATCATGCCCATGTCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS-3UTR CAA 90 bp GTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCAGGTTGGGGTGGCCAAACTGGCGGCCCTaGGCTCGGCCATTGTACAGC +
Preference number: 5 (lower is better)
Translates to: VWGARDLDPLWCLSRLGWPNWRP*ARPLYS
Trigger: GCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGG...CCACCCCAACCTGCTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS TCA 90 bp CACAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTTGCACTTTaGCCCAAACTGGCGGCCCTTGGCTCGGCCATTGTACAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: HRLNATANPVPGVAL*PKLAALGSAIVQLA
Trigger: GGCAAGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
CDS-3UTR CAA 90 bp CATGTGGGTCCAGGTATGGGGAGCCAGAGACCTAGATCCTCTGTGGTGCCTGAGCCCCGGAGTTGCACTTaGACCCAAACTGGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: HVGPGMGSQRPRSSVVPEPRSCT*TQTGGP
Trigger: AGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGG...CTCAGGCACCACAGAGGATCTAGGTCTCTGGCTCCCCATACCTGGACCCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS TCA 90 bp CACAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTTGCACTTTaGCCCAAACTGGCGGCCCTTGGCTCGGCCATTGTACAGCCTACA +
Preference number: 5 (lower is better)
Translates to: HRLNATANPVPGVAL*PKLAALGSAIVQPT
Trigger: TGTAGGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS GCA 90 bp TCCTCTTCCTCTTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTGGTaGAGGTACATGACATTCCGCACGTTCCGGACGGCCCGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSSSPSW*RYMTFRTFRTARAV
Trigger: GACTGCCCGGGCCGTCCGGAACGTGCGGAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAAGAGGAAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS CCA 90 bp CCATCCTCTTCCTCTTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTaGTGCAGGTACATGACATTCCGCACGTTCCGGACGGCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: PSSSSSSSSSSSSPS*CRYMTFRTFRTARA
Trigger: TGCCCGGGCCGTCCGGAACGTGCGGAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAAGAGGAAGAGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CAA 90 bp GGCACAGAGAAGCGTGACAGGGGCCTGAGCCAGTGGGGGCAGAGTGACTACACAGGGTGCAGATCTACTTaGACTTTCTCCCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GTEKRDRGLSQWGQSDYTGCRST*TFSPQL
Trigger: GAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACCC...TGTGTAGTCACTCTGCCCCCACTGGCTCAGGCCCCTGTCACGCTTCTCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CAA 90 bp GGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGGAGACTGAAGATGGCTaGAGTCTGGCAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: GQSDYTPPGACWVNEASGETEDG*SLAGQG
Trigger: GCCTTGACCTGCCAGACTCAAGCCATCTTCAGTCTC...CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547837.5
CDS TCA 90 bp ACAGACACAGGACCCGAGCCTGGCCTCCCAACTTCTCCCCAGCACTaGCAGCAGAGGCCTCATCCTCATCTTGCTGCTCCTGGTCATTCT +
Preference number: 5 (lower is better)
Translates to: TDTGPEPGLPTSPQH*QQRPHPHLAAPGHS
Trigger: AGAATGACCAGGAGCAGCAAGATGAGGATGAGGCCTCTGCTGTCAGTGCTGGGGAGAAGTTGGGAGGCCAGGCTCGGGTCCTGTGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS TCA 90 bp AGCCCCTCCCACCCTCCCACCCGCTACTTACAGTCCCACAGACTCTaGCATCATGTAGCCGGCCCCATTCATCCTCGTAACTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: SPSHPPTRYLQSHRL*HHVAGPIHPRNCPP
Trigger: TGGTGGACAGTTACGAGGATGAATGGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTGTAAGTAGCGGGTGGGAGGGTGGGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550252.1
CDS GCA 90 bp CAAAGGACACAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTTaGACTTTGACCCAAACTGGCGGCCCTTGGCTCGGCCATTGTACA +
Preference number: 5 (lower is better)
Translates to: QRTQAQCHSQSGPRS*TLTQTGGPWLGHCT
Trigger: TGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTGTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CCA 90 bp ATGCCACAGCCAATCCGGTCCCCGGAGTTGCACTTTGACCCAAACTaGCGGCCCTTGGCTCGGCCATTGTACAGCTTGCCATCATCAGCA +
Preference number: 5 (lower is better)
Translates to: MPQPIRSPELHFDPN*RPLARPLYSLPSSA
Trigger: TGCTGATGATGGCAAGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
CDS CCA 90 bp CTCCTCACCCAGGGAGTGCATGCCCACTGCTGGGAACAGTCCATCTaGGGACATGGGCATGATGGTAGAGCCCACCCGCTTCCCATTTTT +
Preference number: 5 (lower is better)
Translates to: LLTQGVHAHCWEQSI*GHGHDGRAHPLPIF
Trigger: AAAAATGGGAAGCGGGTGGGCTCTACCATCATGCCCATGTCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CCA 90 bp CTCCTCACCCAGGGAGTGCATGCCCACTGCTGGGAACAGTCCATCTaGGGACATGGGCATGATGGTAGAGCCCACTTGCCATCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LLTQGVHAHCWEQSI*GHGHDGRAHLPSSA
Trigger: TGCTGATGATGGCAAGTGGGCTCTACCATCATGCCCATGTCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CAA 90 bp CTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACATCCGGTCCCCGGAGTaGCACTTTGACCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LHTSRGLLGKRSLWEVRNIRSPE*HFDPNW
Trigger: CCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGAT...GTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CAA 90 bp CCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCACCCGCTTCCCATTTTaGGTGAAGAAGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: PPGACWVNEASGKSGTGCTRFPF*VKKIWA
Trigger: CGCCCAGATCTTCTTCACCAAAAATGGGAAGCGGGT...GCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CAA 90 bp ACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGGGGTGCAGATCTACTTaGACTTTCTCCCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: TSRGLLGKRSLWEVRNWVGCRST*TFSPQL
Trigger: GAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACCC...CACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS GCA 90 bp GAGCCCACCCGCTTCCCATTTTTGGTGAAGAAGATCTGGGCGGTCTaGACATCAAAGGACACAGGCTCAATGCCACAGCCAATCCGGTCC +
Preference number: 5 (lower is better)
Translates to: EPTRFPFLVKKIWAV*TSKDTGSMPQPIRS
Trigger: GGACCGGATTGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACCGCCCAGATCTTCTTCACCAAAAATGGGAAGCGGGTGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CCA 90 bp TCCCCAGCACTGACAGCAGAGGCCTCATCCTCATCTTGCTGCTCCTaGTCATTCTGTGATGGTACCCACTTACGTCCTGGCGTGAGCATC +
Preference number: 5 (lower is better)
Translates to: SPALTAEASSSSCCS*SFCDGTHLRPGVSI
Trigger: GATGCTCACGCCAGGACGTAAGTGGGTACCATCACAGAATGACCAGGAGCAGCAAGATGAGGATGAGGCCTCTGCTGTCAGTGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS CCA 90 bp CAATCCGGTCCCCGGAGTTGCACTTTGACCCAAACTGGCGGCCCTTaGCTCGGCCATTGTACAGCCTACAGACAGAGTAGTACAGACACA +
Preference number: 5 (lower is better)
Translates to: QSGPRSCTLTQTGGP*LGHCTAYRQSSTDT
Trigger: TGTGTCTGTACTACTCTGTCTGTAGGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS-3UTR CAA 90 bp TACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTCCCTTGGCTCGGCCATaGTACAGCTTGCCATCATCA +
Preference number: 5 (lower is better)
Translates to: YTPPGACWVNEASGKSGTPLARP*YSLPSS
Trigger: TGATGATGGCAAGCTGTACAATGGCCGAGCCAAGGG...AGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS-3UTR CAA 90 bp ATACATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGATCCGGTCCCCGGAGTaGCACTTTGACCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: IHFIHRRVGSEGQREAQQIRSPE*HFDPNW
Trigger: CCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGAT...CTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CAA 90 bp TGCCAGCCCCAGGGCGATGTAGCATTTCTCTCCAGGGTCCACGATCTCCACCTCACATCCACGATGCTTTaGCCCTTCCCTAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: CQPQGDVAFLSRVHDLHLTSTML*PFPKYS
Trigger: GGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGT...GAGGTGGAGATCGTGGACCCTGGAGAGAAATGCTACATCGCCCTGGGGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537540.1
CDS-3UTR CAA 90 bp TCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCAGGAACTGGGTGCCTACATCCACGATGCTTTaGCCCTTCCCTAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: SRGLLGKRSLWEVRNWVPTSTML*PFPKYS
Trigger: GGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGT...AGGCACCCAGTTCCTGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS TCA 90 bp GACAGCAGAGGCCTCATCCTCATCTTGCTGCTCCTGGTCATTCTGTaGTGGTACCCACTTACGTCCTGGCGTGAGCATCACCCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: DSRGLILILLLLVIL*WYPLTSWREHHPPL
Trigger: TAGAGGAGGGTGATGCTCACGCCAGGACGTAAGTGGGTACCATCACAGAATGACCAGGAGCAGCAAGATGAGGATGAGGCCTCTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS-3UTR CAA 90 bp CTCTCTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGTATGGGGAGCCCTTGGCTCGGCCATaGTACAGCTTGCCATCATCA +
Preference number: 5 (lower is better)
Translates to: LSLKHATGTHPCGSRYGEPLARP*YSLPSS
Trigger: TGATGATGGCAAGCTGTACAATGGCCGAGCCAAGGG...CTCCCCATACCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CAA 90 bp AAGCATCATGCCCGAATAGCAGCTGAGATAGGGTGCTCACGCCTCTCCACCCACACCCGCTTCCCATTTTaGGTGAAGAAGATCTGGGCG +
Preference number: 5 (lower is better)
Translates to: KHHARIAAEIGCSRLSTHTRFPF*VKKIWA
Trigger: CGCCCAGATCTTCTTCACCAAAAATGGGAAGCGGGT...GTGGGTGGAGAGGCGTGAGCACCCTATCTCAGCTGCTATTCGGGCATGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CAA 90 bp CATTTCATACATCGTAGGGTGGGAAGCGAGGGCCAAAGGGAGGCCCAGCAGCACACATCCACGATGCTTTaGCCCTTCCCTAAGTACTCC +
Preference number: 5 (lower is better)
Translates to: HFIHRRVGSEGQREAQQHTSTML*PFPKYS
Trigger: GGAGTACTTAGGGAAGGGCAAAAGCATCGTGGATGT...GTGCTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS-3UTR CAA 90 bp GGGCAGAGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGTTCTTCCCAATGATCTaGCCATTCCGAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: GQSDYTPPGACWVNEASGFFPMI*PFRVKK
Trigger: TTTCTTCACTCGGAATGGCAAGATCATTGGGAAGAA...CCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACTCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS GCA 90 bp CAAATTCATAGGAAAAGGGCCGGGTTGCACAGGAGCCAACTCACTTaGCATCATCAGCATGGTAGGCTACAGAGTCAGGCAACCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QIHRKRAGLHRSQLT*HHQHGRLQSQATSQ
Trigger: CTGGCTGGTTGCCTGACTCTGTAGCCTACCATGCTGATGATGGCAAGTGAGTTGGCTCCTGTGCAACCCGGCCCTTTTCCTATGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS CCA 90 bp ATGATGGTAGAGCCCACCCGCTTCCCATTTTTGGTGAAGAAGATCTaGGCGGTCTGCACATCAAAGGACACAGGCTCAATGCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: MMVEPTRFPFLVKKI*AVCTSKDTGSMPQP
Trigger: TGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACCGCCCAGATCTTCTTCACCAAAAATGGGAAGCGGGTGGGCTCTACCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS-3UTR CAA 90 bp AACACTTATTCACAGGAAGGTCAAAGCCTCATCTCCCAGGGGACGTATCTGTGCGGGTGCAGATCTACTTaGACTTTCTCCCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: NTYSQEGQSLISQGTYLCGCRST*TFSPQL
Trigger: GAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACCC...GCACAGATACGTCCCCTGGGAGATGAGGCTTTGACCTTCCTGTGAATAAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301463.9
CDS TCA 90 bp AAGGGTGCTGCCAGGCCACTTCCCTGTCCTGACCAGAAAAGTCTATaGAACACCCAATGGGAAAAGCCAGCCCAAGGTAGTTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: KGAARPLPCPDQKSL*NTQWEKPAQGSSSD
Trigger: ATCTGAAGAACTACCTTGGGCTGGCTTTTCCCATTGGGTGTTTCATAGACTTTTCTGGTCAGGACAGGGAAGTGGCCTGGCAGCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS-3UTR CAA 90 bp AGTGACTACACACCTCCAGGGGCCTGCTGGGTAAACGAAGCCTCTGGGAAGTCATTCTTCCCAATGATCTaGCCATTCCGAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: SDYTPPGACWVNEASGKSFFPMI*PFRVKK
Trigger: TTTCTTCACTCGGAATGGCAAGATCATTGGGAAGAA...TGACTTCCCAGAGGCTTCGTTTACCCAGCAGGCCCCTGGAGGTGTGTAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS-3UTR CAA 90 bp CTCTTAAACATGCAACAGGCACCCACCCATGTGGGTCCAGGTATGGGGAGCCAGTTCTTCCCAATGATCTaGCCATTCCGAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LLNMQQAPTHVGPGMGSQFFPMI*PFRVKK
Trigger: TTTCTTCACTCGGAATGGCAAGATCATTGGGAAGAA...CTGGCTCCCCATACCTGGACCCACATGGGTGGGTGCCTGTTGCATGTTTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547257.1
CDS GCA 90 bp TTCTTCAGATCTAAGATTCCCAAATTCATAGGAAAAGGGCCGGGTTaGACAGGAGCCAACTCACTTGCCATCATCAGCATGGTAGGCTAC +
Preference number: 5 (lower is better)
Translates to: FFRSKIPKFIGKGPG*TGANSLAIISMVGY
Trigger: GTAGCCTACCATGCTGATGATGGCAAGTGAGTTGGCTCCTGTGCAACCCGGCCCTTTTCCTATGAATTTGGGAATCTTAGATCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS TCA 90 bp AGTTTCCATGATAACTTAAAGTATCTCCATCTACAAGGATATGTTTaGACCTCTCCTGATATCGGAAAGCTCGGACCTCTCGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: SFHDNLKYLHLQGYV*TSPDIGKLGPLESP
Trigger: GGGAGATTCGAGAGGTCCGAGCTTTCCGATATCAGGAGAGGTTCAAACATATCCTTGTAGATGGAGATACTTTAAGTTATCATGGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550564.1
CDS GCA 72 bp ACGCTGTCGTCCTCACGGCCCAGCTCAGCGTTGAGGTaGAGCCGCACCTCCTCACCCAGGGAGTGCATGCCC +
Preference number: 6 (lower is better)
Translates to: TLSSSRPSSALR*SRTSSPRECMP
Trigger: GGGCATGCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCGTGAGGACGACAGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS GCA 72 bp GCGTTGAGGTGCAGCCGCACCTCCTCACCCAGGGAGTaGATGCCCACTGCTGGGAACAGTCCATCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: ALRCSRTSSPRE*MPTAGNSPSGD
Trigger: GTCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTCAACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CAA 72 bp ATCATGACGCTGTCGTCCTCACGGCCCAGCTCAGCGTaGAGGTGCAGCCGCACCTCCTCACCCAGGGAGTGC +
Preference number: 6 (lower is better)
Translates to: IMTLSSSRPSSA*RCSRTSSPREC
Trigger: GCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCGTGAGGACGACAGCGTCATGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CAA 90 bp CTGTCCACCATCATGACGCTGTCGTCCTCACGGCCCAGCTCAGCGTaGAGGTGCAGCCGCACCTCCTCACCCAGGGAGTGCATGCCCACT +
Preference number: 6 (lower is better)
Translates to: LSTIMTLSSSRPSSA*RCSRTSSPRECMPT
Trigger: AGTGGGCATGCACTCCCTGGGTGAGGAGGTGCGGCTGCACCTCAACGCTGAGCTGGGCCGTGAGGACGACAGCGTCATGATGGTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS GCA 72 bp CAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTTaGACTTTGACCCAAACTGGCGGCCCTTGGCTCGGC +
Preference number: 6 (lower is better)
Translates to: QAQCHSQSGPRS*TLTQTGGPWLG
Trigger: GCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS GCA 72 bp CAGCCGCACCTCCTCACCCAGGGAGTGCATGCCCACTaGTGGGAACAGTCCATCTGGGGACATGGGCATGAT +
Preference number: 6 (lower is better)
Translates to: QPHLLTQGVHAH*WEQSIWGHGHD
Trigger: ATCATGCCCATGTCCCCAGATGGACTGTTCCCAGCAGTGGGCATGCACTCCCTGGGTGAGGAGGTGCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CAA 72 bp ACAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTaGCACTTTGACCCAAACTGGCGGCCCTTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: TGSMPQPIRSPE*HFDPNWRPLAR
Trigger: CCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CCA 72 bp CCAATCCGGTCCCCGGAGTTGCACTTTGACCCAAACTaGCGGCCCTTGGCTCGGCCATTGTACAGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: PIRSPELHFDPN*RPLARPLYSLP
Trigger: TGGCAAGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
CDS CCA 72 bp CCAATCCGGTCCCCGGAGTTGCACTTTGACCCAAACTaGCGGCCCTTGGCTCGGCCATTGTACAGCCTACAG +
Preference number: 6 (lower is better)
Translates to: PIRSPELHFDPN*RPLARPLYSLQ
Trigger: CTGTAGGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS CAA 72 bp CAATGCCACAGCCAATCCGGTCCCCGGAGTTGCACTTaGACCCAAACTGGCGGCCCTTGGCTCGGCCATTGT +
Preference number: 6 (lower is better)
Translates to: QCHSQSGPRSCT*TQTGGPWLGHC
Trigger: ACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS CAA 90 bp ACACAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTTGCACTTaGACCCAAACTGGCGGCCCTTGGCTCGGCCATTGTACAGCTTGC +
Preference number: 6 (lower is better)
Translates to: TQAQCHSQSGPRSCT*TQTGGPWLGHCTAC
Trigger: GCAAGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
CDS CAA 90 bp ACACAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTTGCACTTaGACCCAAACTGGCGGCCCTTGGCTCGGCCATTGTACAGCCTAC +
Preference number: 6 (lower is better)
Translates to: TQAQCHSQSGPRSCT*TQTGGPWLGHCTAY
Trigger: GTAGGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS TCA 72 bp AATGCCACAGCCAATCCGGTCCCCGGAGTTGCACTTTaGCCCAAACTGGCGGCCCTTGGCTCGGCCATTGTA +
Preference number: 6 (lower is better)
Translates to: NATANPVPGVAL*PKLAALGSAIV
Trigger: TACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS GCA 72 bp CGACTCCCCATTCCCAGCAATTCAGACATGACCATGTaGCCACAGGTGTTCTGCCCAGCCTCCTCCGACCCA +
Preference number: 6 (lower is better)
Translates to: RLPIPSNSDMTM*PQVFCPASSDP
Trigger: TGGGTCGGAGGAGGCTGGGCAGAACACCTGTGGGCACATGGTCATGTCTGAATTGCTGGGAATGGGGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550252.1
CDS CAA 90 bp TCAAAGGACACAGGCTCAATGCCACAGCCAATCCGGTCCCCGGAGTaGCACTTTGACCCAAACTGGCGGCCCTTGGCTCGGCCATTGTAC +
Preference number: 6 (lower is better)
Translates to: SKDTGSMPQPIRSPE*HFDPNWRPLARPLY
Trigger: GTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTGTCCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS GCA 72 bp TCTGGGCGGTCTGCACATCAAAGGACACAGGCTCAATaGCACAGCCAATCCGGTCCCCGGAGTTGCACTTTG +
Preference number: 6 (lower is better)
Translates to: SGRSAHQRTQAQ*HSQSGPRSCTL
Trigger: CAAAGTGCAACTCCGGGGACCGGATTGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACCGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS GCA 72 bp TCTTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTGGTaGAGGTACATGACATTCCGCACGTTCCGGACGGCC +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSPSW*RYMTFRTFRTA
Trigger: GGCCGTCCGGAACGTGCGGAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS CCA 72 bp CCCCGGAGTTGCACTTTGACCCAAACTGGCGGCCCTTaGCTCGGCCATTGTACAGCTTGCCATCATCAGCAT +
Preference number: 6 (lower is better)
Translates to: PRSCTLTQTGGP*LGHCTACHHQH
Trigger: ATGCTGATGATGGCAAGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
CDS CCA 72 bp CCCCGGAGTTGCACTTTGACCCAAACTGGCGGCCCTTaGCTCGGCCATTGTACAGCCTACAGACAGAGTAGT +
Preference number: 6 (lower is better)
Translates to: PRSCTLTQTGGP*LGHCTAYRQSS
Trigger: ACTACTCTGTCTGTAGGCTGTACAATGGCCGAGCCAAGGGCCGCCAGTTTGGGTCAAAGTGCAACTCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS TCA 72 bp GGAGGCCCTAGCCACTCAAGGGGTGCAGATCTACTTTaGCTTTCTCCCCGCAGCTCAGCATTCCAATGGTGG +
Preference number: 6 (lower is better)
Translates to: GGPSHSRGADLL*LSPRSSAFQWW
Trigger: CCACCATTGGAATGCTGAGCTGCGGGGAGAAAGTCAAAGTAGATCTGCACCCCTTGAGTGGCTAGGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS TCA 72 bp CACCCTCCCACCCGCTACTTACAGTCCCACAGACTCTaGCATCATGTAGCCGGCCCCATTCATCCTCGTAAC +
Preference number: 6 (lower is better)
Translates to: HPPTRYLQSHRL*HHVAGPIHPRN
Trigger: GTTACGAGGATGAATGGGGCCGGCTACATGATGTCAGAGTCTGTGGGACTGTAAGTAGCGGGTGGGAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550252.1
CDS CCA 72 bp TCCTCTTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTaGTGCAGGTACATGACATTCCGCACGTTCCGGACG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSPS*CRYMTFRTFRT
Trigger: CGTCCGGAACGTGCGGAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301463.9
ENST00000547837.5
CDS GCA 72 bp AGGAAAAGGGCCGGGTTGCACAGGAGCCAACTCACTTaGCATCATCAGCATGGTAGGCTACAGAGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: RKRAGLHRSQLT*HHQHGRLQSQA
Trigger: TGCCTGACTCTGTAGCCTACCATGCTGATGATGGCAAGTGAGTTGGCTCCTGTGCAACCCGGCCCTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS CCA 72 bp CTGACAGCAGAGGCCTCATCCTCATCTTGCTGCTCCTaGTCATTCTGTGATGGTACCCACTTACGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LTAEASSSSCCS*SFCDGTHLRPG
Trigger: GCCAGGACGTAAGTGGGTACCATCACAGAATGACCAGGAGCAGCAAGATGAGGATGAGGCCTCTGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS GCA 72 bp TCCCCAGCACTGACAGCAGAGGCCTCATCCTCATCTTaGTGCTCCTGGTCATTCTGTGATGGTACCCACTTA +
Preference number: 6 (lower is better)
Translates to: SPALTAEASSSS*CSWSFCDGTHL
Trigger: TAAGTGGGTACCATCACAGAATGACCAGGAGCAGCAAGATGAGGATGAGGCCTCTGCTGTCAGTGCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS CCA 72 bp GAGCCCACCCGCTTCCCATTTTTGGTGAAGAAGATCTaGGCGGTCTGCACATCAAAGGACACAGGCTCAATG +
Preference number: 6 (lower is better)
Translates to: EPTRFPFLVKKI*AVCTSKDTGSM
Trigger: CATTGAGCCTGTGTCCTTTGATGTGCAGACCGCCCAGATCTTCTTCACCAAAAATGGGAAGCGGGTGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS TCA 72 bp GCCAGGCCACTTCCCTGTCCTGACCAGAAAAGTCTATaGAACACCCAATGGGAAAAGCCAGCCCAAGGTAGT +
Preference number: 6 (lower is better)
Translates to: ARPLPCPDQKSL*NTQWEKPAQGS
Trigger: ACTACCTTGGGCTGGCTTTTCCCATTGGGTGTTTCATAGACTTTTCTGGTCAGGACAGGGAAGTGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS GCA 72 bp CGCTTCCCATTTTTGGTGAAGAAGATCTGGGCGGTCTaGACATCAAAGGACACAGGCTCAATGCCACAGCCA +
Preference number: 6 (lower is better)
Translates to: RFPFLVKKIWAV*TSKDTGSMPQP
Trigger: TGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACCGCCCAGATCTTCTTCACCAAAAATGGGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000547837.5
ENST00000550252.1
ENST00000550564.1
CDS TCA 72 bp AGCCTTCAAGGGTGCTGCCAGGCCACTTCCCTGTCCTaGCCAGAAAAGTCTATGAAACACCCAATGGGAAAA +
Preference number: 6 (lower is better)
Translates to: SLQGCCQATSLS*PEKSMKHPMGK
Trigger: TTTTCCCATTGGGTGTTTCATAGACTTTTCTGGTCAGGACAGGGAAGTGGCCTGGCAGCACCCTTGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS CAA 90 bp AAGAAGCCTCCAGAAGGAACAACAGCATCCTTCTTCCCAATGATCTaGCCATTCCGAGTGAAGAAAACCACCACCTTCCTGCCCTCATGC +
Preference number: 6 (lower is better)
Translates to: KKPPEGTTASFFPMI*PFRVKKTTTFLPSC
Trigger: GCATGAGGGCAGGAAGGTGGTGGTTTTCTTCACTCGGAATGGCAAGATCATTGGGAAGAAGGATGCTGTTGTTCCTTCTGGAGGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301463.9
ENST00000547257.1
ENST00000547837.5
CDS TCA 72 bp GTATCTCCATCTACAAGGATATGTTTGAACCTCTCCTaGTATCGGAAAGCTCGGACCTCTCGAATCTCCCGG +
Preference number: 6 (lower is better)
Translates to: VSPSTRICLNLS*YRKARTSRISR
Trigger: CCGGGAGATTCGAGAGGTCCGAGCTTTCCGATATCAGGAGAGGTTCAAACATATCCTTGTAGATGGAGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550564.1
CDS GCA 72 bp TCTAAGATTCCCAAATTCATAGGAAAAGGGCCGGGTTaGACAGGAGCCAACTCACTTGCCATCATCAGCATG +
Preference number: 6 (lower is better)
Translates to: SKIPKFIGKGPG*TGANSLAIISM
Trigger: CATGCTGATGATGGCAAGTGAGTTGGCTCCTGTGCAACCCGGCCCTTTTCCTATGAATTTGGGAATCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550564.1
CDS TCA 72 bp GATAACTTAAAGTATCTCCATCTACAAGGATATGTTTaGACCTCTCCTGATATCGGAAAGCTCGGACCTCTC +
Preference number: 6 (lower is better)
Translates to: DNLKYLHLQGYV*TSPDIGKLGPL
Trigger: GAGAGGTCCGAGCTTTCCGATATCAGGAGAGGTTCAAACATATCCTTGTAGATGGAGATACTTTAAGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301463.9
ENST00000537540.1
ENST00000547837.5
ENST00000550564.1