Pregenerated sensors for SPRR5 (Homo sapiens)
Ensembl gene IDs: ENSG00000283227Ensembl transcript IDs: ENST00000636302.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGAAGAGTAGAGCTCGAGGAAGCCGCCAGCTGCCAGCCTGGTGCTaGCTCTCCTGCAAGTGTGAAGTGTGGCTGCATCCAGAAGCACTG | + |
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Preference number: 1 (lower is better) Translates to: KKSRARGSRQLPAWC*LSCKCEVWLHPEAL Trigger: CAGTGCTTCTGGATGCAGCCACACTTCACACTTGCAGGAGAGGCAGCACCAGGCTGGCAGCTGGCGGCTTCCTCGAGCTCTACTCTTCTT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR CCA 90 bp | GCACTGGTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTaGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCC | + |
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Preference number: 1 (lower is better) Translates to: ALVSRALLGLWSVRC*PRRNFMLCFSWGFA Trigger: GGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR GCA 90 bp | GAAGCACTGGTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATaGTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: EALVSRALLGLWSVR*WPRRNFMLCFSWGF Trigger: GAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAGTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR GCA 90 bp | AAACAGGAGCTGAGGGGAAGCGTGGTAGGAGAAGATGCCTGTGCATaGCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: KQELRGSVVGEDACA*RSCFQQGNVDACQE Trigger: TTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCCCTCAGCTCCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR GCA 90 bp | TTGAAAACAGGAGCTGAGGGGAAGCGTGGTAGGAGAAGATGCCTGTaGATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCA | + |
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Preference number: 1 (lower is better) Translates to: LKTGAEGKRGRRRCL*MPLMFPAGQCRCMS Trigger: TGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCCCTCAGCTCCTGTTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR TCA 90 bp | CGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATaGTTAGATAGTTTAGAACCAGATCCTTGTCTGAGATGGAAACTG | + |
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Preference number: 1 (lower is better) Translates to: RSCFQQGNVDACQER*LDSLEPDPCLRWKL Trigger: CAGTTTCCATCTCAGACAAGGATCTGGTTCTAAACTATCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR-3UTR GCA 90 bp | CGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTCTGTGGAGTGTAAGATaGTGGCCCAGAAGGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: RGRRRCLCMPLMFPAGQCLWSVR*WPRRNF Trigger: GAAGTTCCTTCTGGGCCAGCATCTTACACTCCACAG...ACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR-3UTR CCA 90 bp | CGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTATGCTCTGTTTTTCCTaGGGGTTCGCCTCTGATCAC | + |
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Preference number: 2 (lower is better) Translates to: RGRRRCLCMPLMFPAGQCMLCFS*GFASDH Trigger: GTGATCAGAGGCGAACCCCCAGGAAAAACAGAGCAT...ACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR-3UTR CCA 90 bp | GTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTATGCAAGTGTGAAGTGTaGCTGCATCCAGAAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: VVGEDACACRSCFQQGNVCKCEV*LHPEAL Trigger: CAGTGCTTCTGGATGCAGCCACACTTCACACTTGCA...TACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR-3UTR TCA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGAATCCAGAAGCACTGGTaGGCAGGGCTTTGCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PLMFPAGQCRCMSGKMIRIQKHW*AGLCLA Trigger: GGCCAAGCAAAGCCCTGCTCACCAGTGCTTCTGGAT...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR-3UTR CCA 90 bp | TGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGAGATCCTTGTCTGAGATaGAAACTGCAGCTGCTAATT | + |
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Preference number: 2 (lower is better) Translates to: CACRSCFQQGNVDACQERDPCLR*KLQLLI Trigger: AATTAGCAGCTGCAGTTTCCATCTCAGACAAGGATC...TCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR-3UTR CAA 90 bp | CTGCTAATTAAGAAGAGTAGAGCTCGAGGAAGCCGCCAGCTGCCAGCCTGGTGCCTGGTGAGCAGGGCTTaGCTTGGCCTGTGGAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LLIKKSRARGSRQLPAWCLVSRA*LGLWSV Trigger: TACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAG...GCACCAGGCTGGCAGCTGGCGGCTTCCTCGAGCTCTACTCTTCTTAATTAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR GCA 72 bp | GGAGCTGAGGGGAAGCGTGGTAGGAGAAGATGCCTGTaGATGCCGCTCATGTTTCCAGCAGGGCAATGTAGA | + |
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Preference number: 3 (lower is better) Translates to: GAEGKRGRRRCL*MPLMFPAGQCR Trigger: TCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCCCTCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR GCA 72 bp | CTGAGGGGAAGCGTGGTAGGAGAAGATGCCTGTGCATaGCGCTCATGTTTCCAGCAGGGCAATGTAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: LRGSVVGEDACA*RSCFQQGNVDA Trigger: TGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR GCA 72 bp | AAAACAGGAGCTGAGGGGAAGCGTGGTAGGAGAAGATaGCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: KTGAEGKRGRRR*LCMPLMFPAGQ Trigger: TTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCCCTCAGCTCCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR CCA 72 bp | CCAGAAGCACTGGTGAGCAGGGCTTTGCTTGGCCTGTaGAGTGTAAGATGCTGGCCCAGAAGGAACTTCATG | + |
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Preference number: 3 (lower is better) Translates to: PEALVSRALLGL*SVRCWPRRNFM Trigger: CATGAAGTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAGTGCTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR GCA 72 bp | GTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATaGTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: VSRALLGLWSVR*WPRRNFMLCFS Trigger: GGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR-3UTR CAA 90 bp | AGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCTTTAGAACCAGATCCTaGTCTGAGATGGAAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: RRRCLCMPLMFPAGQCRCFRTRS*SEMETA Trigger: TGCAGTTTCCATCTCAGACAAGGATCTGGTTCTAAA...GCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| 3UTR TCA 72 bp | TTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATaGTTAGATAGTTTAGAACCAGATCCTTGTCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: FQQGNVDACQER*LDSLEPDPCLR Trigger: TCTCAGACAAGGATCTGGTTCTAAACTATCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GAGGGGAAGCGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGCACTGCTGAGGGGGTaGGCACTTGGGGGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: EGKRGRRRCLCMPLMFPAALLRG*ALGGTG Trigger: CCCTGTGCCCCCAAGTGCCCACCCCCTCAGCAGTGC...TGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCAGAGGGGGTGGGCACTTaGGGGCACAGGGCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GEDACACRSCFQQGNVDAEGVGT*GHRAPG Trigger: GCCAGGAGCCCTGTGCCCCCAAGTGCCCACCCCCTC...TGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | AAGCGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAAGAGGAAGCCGCCAGCTaGCAGCCTGGTGCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KRGRRRCLCMPLMFPAGQEEAAS*QPGAAS Trigger: AGAGGCAGCACCAGGCTGGCAGCTGGCGGCTTCCTC...TTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR TCA 90 bp | CTGGTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTGGCCCAGAAGGATCCAGAAGCACTGGTaGGCAGGGCTTTGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LVSRALLGLWSVRCWPRRIQKHW*AGLCLA Trigger: GGCCAAGCAAAGCCCTGCTCACCAGTGCTTCTGGAT...CCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | ACTGGTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTGGCCCAGAAGCCCAGGGCTTACTTCTaGTTGGACGTCTGGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: TGEQGFAWPVECKMLAQKPRAYF*LDVWHC Trigger: GCAGTGCCAGACGTCCAAGCAGAAGTAAGCCCTGGG...CTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR TCA 90 bp | GTAAGATGCTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCCCTGGGGGTTCGCCTCTaGTCACATGCCCAGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: VRCWPRRNFMLCFSWGFALGVRL*SHAQGL Trigger: TAAGCCCTGGGCATGTGATCAGAGGCGAACCCCCAG...GGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCATCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR TCA 90 bp | GTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTGGCCCAGAAGGAACCCTCTCCTGCAAGTGTaGAGTGTGGCTGCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSRALLGLWSVRCWPRRNPLLQV*SVAASR Trigger: TCTGGATGCAGCCACACTTCACACTTGCAGGAGAGG...GTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTGGCCCAGAAGGAACGGGCTTACTTCTGCTTaGACGTCTGGCACTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VSRALLGLWSVRCWPRRNGLTSA*TSGTAE Trigger: CTCAGCAGTGCCAGACGTCCAAGCAGAAGTAAGCCC...GTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTGGCCCAGAAGGATTCTGGGCTGGACTTaGAACAAGGTTCACCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: LVSRALLGLWSVRCWPRRILGWT*NKVHQR Trigger: TCGCTGGTGAACCTTGTTGCAAGTCCAGCCCAGAAT...CCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | AGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCCTGCCAGCCTGGTGCTaGCTCTCCTGCAAGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: RRRCLCMPLMFPAGQCRCLPAWC*LSCKCE Trigger: TTCACACTTGCAGGAGAGGCAGCACCAGGCTGGCAG...GCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GAGGGGAAGCGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAAGGTGTGGAGGGGTTTaGGATGCTCTGAGCCTATCT | + |
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Preference number: 4 (lower is better) Translates to: EGKRGRRRCLCMPLMFPARCGGV*DALSLS Trigger: AGATAGGCTCAGAGCATCCCAAACCCCTCCACACCT...TGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGAGGGGGCTGGCAAGGCTaGTTGGTCTGTTGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLMFPAGQCRCMSGKMIRGGWQG*LVCWGG Trigger: CCCACCCCAACAGACCAAGCAGCCTTGCCAGCCCCC...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | GGGAAGCGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCCAGAAGGAACTTCATaGTCTGTTTTTCCTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GKRGRRRCLCMPLMFPAGPEGTS*SVFPGG Trigger: ACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGG...CCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | TGCTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCCTCTGATTGGTGCTGCCTCTCCTaGAAGTGTGAAGTGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CWPRRNFMLCFSWGFASDWCCLS*KCEVWL Trigger: CAGCCACACTTCACACTTGCAGGAGAGGCAGCACCA...ATCAGAGGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GCTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCCTCTGATCTGCAAGTGTGAAGTGTaGCTGCATCCAGAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: AGPEGTSCSVFPGGSPLICKCEV*LHPEAL Trigger: CAGTGCTTCTGGATGCAGCCACACTTCACACTTGCA...GATCAGAGGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | GTAAGATGCTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCCTGGAGGGGTTTGGGATaGTCTGAGCCTATCTACCTT | + |
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Preference number: 4 (lower is better) Translates to: VRCWPRRNFMLCFSWGFAWRGLG*SEPIYL Trigger: AAGGTAGATAGGCTCAGAGCATCCCAAACCCCTCCA...GGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCATCTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | CTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGGAAGATGCCTGTGCATaGCGCTCATGTTTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LCMPLMFPAGQCRCMSGKEDACA*RSCFQQ Trigger: CTGCTGGAAACATGAGCGGCATGCACAGGCATCTTC...CTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | GGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCAAGGAGAAGATGCCTGTaGATGCCGCTCATGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GEDACACRSCFQQGNVDARRRCL*MPLMFP Trigger: TGGAAACATGAGCGGCATGCACAGGCATCTTCTCCT...TGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAATGCTCTGTTTTTCCTaGGGGTTCGCCTCTGATCAC | + |
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Preference number: 4 (lower is better) Translates to: VVGEDACACRSCFQQGNVMLCFS*GFASDH Trigger: GTGATCAGAGGCGAACCCCCAGGAAAAACAGAGCAT...TACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GTGAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTGGCCCAGAAGGAACGATCCTTGTCTGAGATaGAAACTGCAGCTGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: VSRALLGLWSVRCWPRRNDPCLR*KLQLLI Trigger: AATTAGCAGCTGCAGTTTCCATCTCAGACAAGGATC...GTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGACGTGGTAGGAGAAGATaGCTGTGCATGCCGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: PLMFPAGQCRCMSGKMIRRGRRR*LCMPLM Trigger: CATGAGCGGCATGCACAGGCATCTTCTCCTACCACG...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGATCGCCTCTGATCACATaGCCAGGGCTTACTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLMFPAGQCRCMSGKMIRSPLIT*PGLTSA Trigger: AGCAGAAGTAAGCCCTGGGCATGTGATCAGAGGCGA...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGAGAGCAGGGCTTTGCTTaGCCTGTGGAGTGTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: PLMFPAGQCRCMSGKMIREQGFA*PVECKM Trigger: CATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTC...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGACTGTGGAGTGTAAGATaGTGGCCCAGAAGGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: PLMFPAGQCRCMSGKMIRLWSVR*WPRRNF Trigger: GAAGTTCCTTCTGGGCCAGCATCTTACACTCCACAG...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR GCA 90 bp | CTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGGCAGGGCAATGTAGATaGATGTCAGGAAAGATGATT | + |
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Preference number: 4 (lower is better) Translates to: LCMPLMFPAGQCRCMSGKAGQCR*MSGKMI Trigger: AATCATCTTTCCTGACATGCATCTACATTGCCCTGC...CTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR TCA 90 bp | AGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCGCATGTCAGGAAAGATaGTTAGATAGTTTAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: RRRCLCMPLMFPAGQCRCACQER*LDSLEP Trigger: TGGTTCTAAACTATCTAATCATCTTTCCTGACATGC...GCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR TCA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGAGGGTTTGGGATGCTCTaGGCCTATCTACCTTTTATA | + |
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Preference number: 4 (lower is better) Translates to: PLMFPAGQCRCMSGKMIRGFGML*AYLPFI Trigger: TATAAAAGGTAGATAGGCTCAGAGCATCCCAAACCC...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CCA 90 bp | GATAGTTTAGAACCAGATCCTTGTCTGAGATGGAAACTGCAGCTGCTAATTAAGTCTGCTGAGACATTCTaGGCTGGACTTGCAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: DSLEPDPCLRWKLQLLIKSAETF*AGLATR Trigger: CCTTGTTGCAAGTCCAGCCCAGAATGTCTCAGCAGA...CTTAATTAGCAGCTGCAGTTTCCATCTCAGACAAGGATCTGGTTCTAAACTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR TCA 90 bp | GATAGTTTAGAACCAGATCCTTGTCTGAGATGGAAACTGCAGCTGCTAATTAAGTCTGTTTTAATTGTTTaGAAACAGGAGCTGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: DSLEPDPCLRWKLQLLIKSVLIV*KQELRG Trigger: TCCCCTCAGCTCCTGTTTTCAAACAATTAAAACAGA...CTTAATTAGCAGCTGCAGTTTCCATCTCAGACAAGGATCTGGTTCTAAACTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CAA 90 bp | GTAAGATGCTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCCCAGGGCTCCTGGCACTaGGGTGGGGGCTGGCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: VRCWPRRNFMLCFSWGFAQGSWH*GGGWQG Trigger: GCCTTGCCAGCCCCCACCCAAGTGCCAGGAGCCCTG...GGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCATCTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CAA 90 bp | GGGAAGCGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCATTCTGGGCTGGACTaGCAACAAGGTTCACCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GKRGRRRCLCMPLMFPAGHSGLD*QQGSPA Trigger: CGCTGGTGAACCTTGTTGCAAGTCCAGCCCAGAATG...CCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTACCACGCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS TCA 90 bp | GCCCAGAAGGAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCCTCTaGTCACATGCCCAGGGCTTACTTCTGCTTGGACGTCTGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: AQKELHALFFLGVRL*SHAQGLLLLGRLAL Trigger: CAGTGCCAGACGTCCAAGCAGAAGTAAGCCCTGGGCATGTGATCAGAGGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CAA 90 bp | TGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGACTGGTGAGCAGGGCTTaGCTTGGCCTGTGGAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: CACRSCFQQGNVDACQERLVSRA*LGLWSV Trigger: TACACTCCACAGGCCAAGCAAAGCCCTGCTCACCAG...TCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS CCA 90 bp | AGTGTAAGATGCTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTaGGGGTTCGCCTCTGATCACATGCCCAGGGCTTACTTCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SVRCWPRRNFMLCFS*GFASDHMPRAYFCL Trigger: CAAGCAGAAGTAAGCCCTGGGCATGTGATCAGAGGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCATCTTACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS CCA 90 bp | CAACAAGGTTCACCAGCGACTGGAGCAGATAGGTGTGGAGGGGTTTaGGATGCTCTGAGCCTATCTACCTTTTATATACCTCTCATCCCT | + |
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Preference number: 5 (lower is better) Translates to: QQGSPATGADRCGGV*DALSLSTFYIPLIP Trigger: AGGGATGAGAGGTATATAAAAGGTAGATAGGCTCAGAGCATCCCAAACCCCTCCACACCTATCTGCTCCAGTCGCTGGTGAACCTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CAA 90 bp | GAGCAGGGCTTTGCTTGGCCTGTGGAGTGTAAGATGCTGGCCCAGAAGGAACTTTTTAGAACCAGATCCTaGTCTGAGATGGAAACTGCA | + |
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Preference number: 5 (lower is better) Translates to: EQGFAWPVECKMLAQKELFRTRS*SEMETA Trigger: TGCAGTTTCCATCTCAGACAAGGATCTGGTTCTAAA...AAGTTCCTTCTGGGCCAGCATCTTACACTCCACAGGCCAAGCAAAGCCCTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS-3UTR CAA 90 bp | CCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGATTCTGTTTTAATTGTTaGAAAACAGGAGCTGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PLMFPAGQCRCMSGKMIRFCFNC*KTGAEG Trigger: CCCCTCAGCTCCTGTTTTCAAACAATTAAAACAGAA...TCTAATCATCTTTCCTGACATGCATCTACATTGCCCTGCTGGAAACATGAGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS CCA 72 bp | TCGCCTCTGATCACATGCCCAGGGCTTACTTCTGCTTaGACGTCTGGCACTGCTGAGGGGGTGGGCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SPLITCPGLTSA*TSGTAEGVGTW Trigger: CCAAGTGCCCACCCCCTCAGCAGTGCCAGACGTCCAAGCAGAAGTAAGCCCTGGGCATGTGATCAGAGGCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS GCA 72 bp | TGCTCTGTTTTTCCTGGGGGTTCGCCTCTGATCACATaGCCAGGGCTTACTTCTGCTTGGACGTCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: CSVFPGGSPLIT*PGLTSAWTSGT Trigger: AGTGCCAGACGTCCAAGCAGAAGTAAGCCCTGGGCATGTGATCAGAGGCGAACCCCCAGGAAAAACAGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS CCA 72 bp | TGCTGGCCCAGAAGGAACTTCATGCTCTGTTTTTCCTaGGGGTTCGCCTCTGATCACATGCCCAGGGCTTAC | + |
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Preference number: 6 (lower is better) Translates to: CWPRRNFMLCFS*GFASDHMPRAY Trigger: GTAAGCCCTGGGCATGTGATCAGAGGCGAACCCCCAGGAAAAACAGAGCATGAAGTTCCTTCTGGGCCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS TCA 72 bp | GAACTTCATGCTCTGTTTTTCCTGGGGGTTCGCCTCTaGTCACATGCCCAGGGCTTACTTCTGCTTGGACGT | + |
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Preference number: 6 (lower is better) Translates to: ELHALFFLGVRL*SHAQGLLLLGR Trigger: ACGTCCAAGCAGAAGTAAGCCCTGGGCATGTGATCAGAGGCGAACCCCCAGGAAAAACAGAGCATGAAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS TCA 72 bp | CTGGAGCAGATAGGTGTGGAGGGGTTTGGGATGCTCTaGGCCTATCTACCTTTTATATACCTCTCATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LEQIGVEGFGML*AYLPFIYLSSL Trigger: CAGGGATGAGAGGTATATAAAAGGTAGATAGGCTCAGAGCATCCCAAACCCCTCCACACCTATCTGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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| CDS CCA 72 bp | TCACCAGCGACTGGAGCAGATAGGTGTGGAGGGGTTTaGGATGCTCTGAGCCTATCTACCTTTTATATACCT | + |
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Preference number: 6 (lower is better) Translates to: SPATGADRCGGV*DALSLSTFYIP Trigger: AGGTATATAAAAGGTAGATAGGCTCAGAGCATCCCAAACCCCTCCACACCTATCTGCTCCAGTCGCTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636302.1 |
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