Pregenerated sensors for SPRR4 (Homo sapiens)
Ensembl gene IDs: ENSG00000184148Ensembl transcript IDs: ENST00000328051.3
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAACAGGAGAGAAGCCCAGAGCAGGGGGCATCATGGAGAGGAATaGGGCAGAAACTGTGCACCAGCCTCTGTGACCCTACTTGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: ENRREAQSRGHHGEE*GRNCAPASVTLLVR Trigger: CCTGACAAGTAGGGTCACAGAGGCTGGTGCACAGTTTCTGCCTCATTCCTCTCCATGATGCCCCCTGCTCTGGGCTTCTCTCCTGTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| 3UTR CCA 90 bp | AACCCCAGAAGAAGCCCAGACACTTTCCTCACTTTGGGAAATGGATaGGCCTTAGCTGTGGCCACGCTGGAGCCTGCAGAGAATGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: NPRRSPDTFLTLGNG*ALAVATLEPAENEV Trigger: GACCTCATTCTCTGCAGGCTCCAGCGTGGCCACAGCTAAGGCCCATCCATTTCCCAAAGTGAGGAAAGTGTCTGGGCTTCTTCTGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| 3UTR TCA 90 bp | AGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTaGGAGGAGGGTAGGCTCAAGAGCTGGAGGGAAGAGGAGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: RNPYNASLHLGQEEM*EEGRLKSWREEEKE Trigger: TTCCTTCTCCTCTTCCCTCCAGCTCTTGAGCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTGTGCACCAGCCTCTGTGACCCTACTTGTCAGGGTGGAACCCCAGAAGAACCAAGGTGGTATGTGTaGGGAAGGGTACGATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: KLCTSLCDPTCQGGTPEEPRWYV*GRVRWE Trigger: TTCCCATCGTACCCTTCCCCACACATACCACCTTGG...TTCTTCTGGGGTTCCACCCTGACAAGTAGGGTCACAGAGGCTGGTGCACAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | ATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGTGGGCACTGCTGCTaGTGCCGCTGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ILTMLPYILGRRRCERRVGGHCC*CRCCCW Trigger: CCAGCAGCAGCAGCGGCAGCAGCAGCAGTGCCCACC...TACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | ATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTACTCTGGGGTGGGCACTaGTGCTGCTGCCGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILTMLPYILGRRRCERRVLWGGH*CCCRCC Trigger: GCAGCAGCGGCAGCAGCAGCAGTGCCCACCCCAGAG...TACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | ATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTATTCACTTGCTGCTGCTaGGCCCTCTGGGGTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ILTMLPYILGRRRCERRVFTCCC*ALWGGH Trigger: GTGCCCACCCCAGAGGGCCCAGCAGCAGCAAGTGAA...TACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR TCA 90 bp | ATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTATCTGCTGGGCTGGAATaGTGGTGCCTTTCGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ILTMLPYILGRRRCERRVSAGLE*WCLSVG Trigger: GCCCACCGAAAGGCACCATCATTCCAGCCCAGCAGA...TACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR TCA 90 bp | ATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGGCAGGAGGAGATGTaGGAGGAGGGTAGGCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: ILTMLPYILGRRRCERRVGQEEM*EEGRLK Trigger: CTTGAGCCTACCCTCCTCTCACATCTCCTCCTGCCC...TACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCTTGCTCTTGGAGGCTTaGTGGGCTGAGGGACACTTC | + |
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Preference number: 4 (lower is better) Translates to: LTMLPYILGRRRCERRVGLLLEA*WAEGHF Trigger: GAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAA...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCCCCTACTTGTCAGGGTaGAACCCCAGAAGAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LTMLPYILGRRRCERRVGPYLSG*NPRRSP Trigger: TGGGCTTCTTCTGGGGTTCCACCCTGACAAGTAGGG...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR TCA 90 bp | GTACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGAGTGCACCAGCCTCTGTaGCCCTACTTGTCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VRWEEILTMLPYILGRRRVHQPL*PYLSGW Trigger: CCACCCTGACAAGTAGGGTCACAGAGGCTGGTGCAC...TCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | AAACTGTGCACCAGCCTCTGTGACCCTACTTGTCAGGGTGGAACCCCAGAAGAACATTGCTTCTTGACCTaGGGAGCACATGGATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KLCTSLCDPTCQGGTPEEHCFLT*GAHGSL Trigger: CAAGGATCCATGTGCTCCCCAGGTCAAGAAGCAATG...TTCTTCTGGGGTTCCACCCTGACAAGTAGGGTCACAGAGGCTGGTGCACAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCGATGGTGCCTTTCGGTaGGCATTGCTTCTTGACCTG | + |
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Preference number: 4 (lower is better) Translates to: LTMLPYILGRRRCERRVGDGAFR*ALLLDL Trigger: CAGGTCAAGAAGCAATGCCCACCGAAAGGCACCATC...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCACTTCTGTTTGCTCTTaGAGGCTTGCTGGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LTMLPYILGRRRCERRVGTSVCS*RLAGLR Trigger: CCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGT...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCACATTTAACAGGGGGTaGCTGACAAGGCTGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LTMLPYILGRRRCERRVGTFNRG*LTRLLH Trigger: GTGAAGCAGCCTTGTCAGCCACCCCCTGTTAAATGT...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR TCA 90 bp | GATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGTTAACAGGGGGTGGCTaGCAAGGCTGCTTCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: DGKKSLQCFLTSWAGGDVLTGGG*QGCFTC Trigger: GCAAGTGAAGCAGCCTTGTCAGCCACCCCCTGTTAA...CACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR TCA 90 bp | GTACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGAGTGGGCATTGCTTCTTaGCCTGGGGAGCACATGGAT | + |
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Preference number: 4 (lower is better) Translates to: VRWEEILTMLPYILGRRRVGIAS*PGEHMD Trigger: ATCCATGTGCTCCCCAGGTCAAGAAGCAATGCCCAC...TCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | GTACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGACCTTTCGGTGGGCATTaGTTCTTGACCTGGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VRWEEILTMLPYILGRRRPFGGH*FLTWGA Trigger: TGCTCCCCAGGTCAAGAAGCAATGCCCACCGAAAGG...TCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | GATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGGCTGAGGGACACTTCTaGTGGGCTGGAATGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: DGKKSLQCFLTSWAGGDVAEGHF*WAGMMV Trigger: CACCATCATTCCAGCCCAGCAGAAGTGTCCCTCAGC...CACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCGAGCACATGGATCCTTaGTTTTGGGTGCACATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LTMLPYILGRRRCERRVGEHMDP*FWVHMS Trigger: AGACATGTGCACCCAAAACCAAGGATCCATGTGCTC...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | TACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATTGCTGCCGCTGCTGCTaGTGGGAAGACATTGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: YDGKKSLQCFLTSWAGGDCCRCC*WEDIAL Trigger: TAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCAGCA...ATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | TACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATTGCCGCTGCTGCTGCTaGGAAGACATTGCTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: YDGKKSLQCFLTSWAGGDCRCCC*EDIALG Trigger: TCCTAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCA...ATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | GATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGGGGAGAGCATCGGGGTaGGATATAGAAGAAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: DGKKSLQCFLTSWAGGDVGRASG*DIEEAK Trigger: CTTGGCTTCTTCTATATCCCACCCCGATGCTCTCCC...CACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR TCA 90 bp | TACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGGTGCACATGTCTCTTaGCATTTAACAGGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: YDGKKSLQCFLTSWAGGDGAHVS*HLTGGG Trigger: GCCACCCCCTGTTAAATGTCAAGAGACATGTGCACC...ATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | AAACTGTGCACCAGCCTCTGTGACCCTACTTGTCAGGGTGGAACCCCAGAAGAAATCCTTGGTTTTGGGTaGACATGTCTCTTGACATTT | + |
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Preference number: 4 (lower is better) Translates to: KLCTSLCDPTCQGGTPEEILGFG*TCLLTF Trigger: AAATGTCAAGAGACATGTGCACCCAAAACCAAGGAT...TTCTTCTGGGGTTCCACCCTGACAAGTAGGGTCACAGAGGCTGGTGCACAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | ATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTATGCTTCCTTACATCTTaGGCAGGAGGAGATGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILTMLPYILGRRRCERRVCFLTS*AGGDVR Trigger: TCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCA...TACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | ATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTATGGGGAAGGGTACGATaGGAAGAAATCCTTACAATG | + |
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Preference number: 4 (lower is better) Translates to: ILTMLPYILGRRRCERRVWGRVR*EEILTM Trigger: CATTGTAAGGATTTCTTCCCATCGTACCCTTCCCCA...TACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR GCA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCAAGAAATCCTTACAATaGTTCCTTACATCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LTMLPYILGRRRCERRVGKKSLQ*FLTSWA Trigger: TGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTT...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CCA 90 bp | GTACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGAATGGATCCTTGGTTTTaGGTGCACATGTCTCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: VRWEEILTMLPYILGRRRMDPWF*VHMSLD Trigger: GTCAAGAGACATGTGCACCCAAAACCAAGGATCCAT...TCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | TGCTGCTGGGCCCTCTGGGGTGGGCACTGCTGCTGCTGCCGCTGCTaGTGCTGGGAAGACATTGCTCTAGGAACAGGTGAGCCAGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: CCWALWGGHCCCCRC*CWEDIALGTGEPEA Trigger: CGCCTCTGGCTCACCTGTTCCTAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCAGCAGCAGCAGTGCCCACCCCAGAGGGCCCAGCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | TGCTGCTGCTGGGCCCTCTGGGGTGGGCACTGCTGCTGCTGCCGCTaGTGCTGCTGGGAAGACATTGCTCTAGGAACAGGTGAGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: CCCWALWGGHCCCCR*CCWEDIALGTGEPE Trigger: CTCTGGCTCACCTGTTCCTAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCAGCAGCAGCAGTGCCCACCCCAGAGGGCCCAGCAGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | GGCTGCTTCACTTGCTGCTGCTGGGCCCTCTGGGGTGGGCACTGCTaGTGCTGCCGCTGCTGCTGCTGGGAAGACATTGCTCTAGGAACA | + |
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Preference number: 5 (lower is better) Translates to: GCFTCCCWALWGGHC*CCRCCCWEDIALGT Trigger: TGTTCCTAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCAGCAGCAGCAGTGCCCACCCCAGAGGGCCCAGCAGCAGCAAGTGAAGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | TTCACTTGCTGCTGCTGGGCCCTCTGGGGTGGGCACTGCTGCTGCTaGCGCTGCTGCTGCTGGGAAGACATTGCTCTAGGAACAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: FTCCCWALWGGHCCC*RCCCWEDIALGTGE Trigger: CTCACCTGTTCCTAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCAGCAGCAGCAGTGCCCACCCCAGAGGGCCCAGCAGCAGCAAGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | TGCTTCACTTGCTGCTGCTGGGCCCTCTGGGGTGGGCACTGCTGCTaGTGCCGCTGCTGCTGCTGGGAAGACATTGCTCTAGGAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: CFTCCCWALWGGHCC*CRCCCWEDIALGTG Trigger: ACCTGTTCCTAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCAGCAGCAGCAGTGCCCACCCCAGAGGGCCCAGCAGCAGCAAGTGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS TCA 90 bp | TCCAGTCCATCCTTACTTCTGTTTGCTCTTGGAGGCTTGCTGGGCTaGGGGACACTTCTGCTGGGCTGGAATGATGGTGCCTTTCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSPSLLLFALGGLLG*GTLLLGWNDGAFRW Trigger: CCACCGAAAGGCACCATCATTCCAGCCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGTAAGGATGGACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | GGACACTTCTGCTGGGCTGGAATGATGGTGCCTTTCGGTGGGCATTaGTTCTTGACCTGGGGAGCACATGGATCCTTGGTTTTGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GHFCWAGMMVPFGGH*FLTWGAHGSLVLGA Trigger: TGCACCCAAAACCAAGGATCCATGTGCTCCCCAGGTCAAGAAGCAATGCCCACCGAAAGGCACCATCATTCCAGCCCAGCAGAAGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS CCA 90 bp | TTCTGTTTGCTCTTGGAGGCTTGCTGGGCTGAGGGACACTTCTGCTaGGCTGGAATGATGGTGCCTTTCGGTGGGCATTGCTTCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: FCLLLEACWAEGHFC*AGMMVPFGGHCFLT Trigger: GGTCAAGAAGCAATGCCCACCGAAAGGCACCATCATTCCAGCCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | CTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGAGGAGGGTAGGCGCCTTTCGGTGGGCATaGCTTCTTGACCTGGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LTMLPYILGRRRCERRVGAFRWA*LLDLGS Trigger: GCTCCCCAGGTCAAGAAGCAATGCCCACCGAAAGGC...GCCTACCCTCCTCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | TACTTCTGTTTGCTCTTGGAGGCTTGCTGGGCTGAGGGACACTTCTaGTGGGCTGGAATGATGGTGCCTTTCGGTGGGCATTGCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: YFCLLLEACWAEGHF*WAGMMVPFGGHCFL Trigger: CAAGAAGCAATGCCCACCGAAAGGCACCATCATTCCAGCCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 90 bp | AGGATGGTGGATGATGGTAATATCCAGTCCATCCTTACTTCTGTTTaGTCTTGGAGGCTTGCTGGGCTGAGGGACACTTCTGCTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RMVDDGNIQSILTSV*SWRLAGLRDTSAGL Trigger: CAGCCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGTAAGGATGGACTGGATATTACCATCATCCACCATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | GATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGACAAGGCTGCTTCACTaGCTGCTGCTGGGCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: DGKKSLQCFLTSWAGGDVTRLLH*LLLGPL Trigger: CAGAGGGCCCAGCAGCAGCAAGTGAAGCAGCCTTGT...CACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | GATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGGGTGGGCATTGCTTCTaGACCTGGGGAGCACATGGA | + |
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Preference number: 5 (lower is better) Translates to: DGKKSLQCFLTSWAGGDVGGHCF*TWGAHG Trigger: TCCATGTGCTCCCCAGGTCAAGAAGCAATGCCCACC...CACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | GATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGGGAGCACATGGATCCTaGGTTTTGGGTGCACATGTC | + |
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Preference number: 5 (lower is better) Translates to: DGKKSLQCFLTSWAGGDVGAHGS*VLGAHV Trigger: GACATGTGCACCCAAAACCAAGGATCCATGTGCTCC...CACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | GGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGAGATACTTCTGTTTGCTCTaGGAGGCTTGCTGGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GKKSLQCFLTSWAGGDVRYFCLL*EACWAE Trigger: CTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGTA...TCTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | TACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGGGTGCACATGTCTCTaGACATTTAACAGGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: YDGKKSLQCFLTSWAGGDGCTCL*TFNRGW Trigger: CCACCCCCTGTTAAATGTCAAGAGACATGTGCACCC...ATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | GTACGATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGAATGCTTCCTTACATCTaGGGCAGGAGGAGATGTGAG | + |
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Preference number: 5 (lower is better) Translates to: VRWEEILTMLPYILGRRRMLPYI*GRRRCE Trigger: CTCACATCTCCTCCTGCCCAAGATGTAAGGAAGCAT...TCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATCGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS-3UTR CAA 90 bp | GATGGGAAGAAATCCTTACAATGCTTCCTTACATCTTGGGCAGGAGGAGATGTGGACACTTTCCTCACTTaGGGAAATGGATGGGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: DGKKSLQCFLTSWAGGDVDTFLT*GNGWAL Trigger: TAAGGCCCATCCATTTCCCAAAGTGAGGAAAGTGTC...CACATCTCCTCCTGCCCAAGATGTAAGGAAGCATTGTAAGGATTTCTTCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS CCA 72 bp | TGGGGTGGGCACTGCTGCTGCTGCCGCTGCTGCTGCTaGGAAGACATTGCTCTAGGAACAGGTGAGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: WGGHCCCCRCCC*EDIALGTGEPE Trigger: CTCTGGCTCACCTGTTCCTAGAGCAATGTCTTCCCAGCAGCAGCAGCGGCAGCAGCAGCAGTGCCCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS CCA 72 bp | CTCTTGGAGGCTTGCTGGGCTGAGGGACACTTCTGCTaGGCTGGAATGATGGTGCCTTTCGGTGGGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: LLEACWAEGHFC*AGMMVPFGGHC Trigger: GCAATGCCCACCGAAAGGCACCATCATTCCAGCCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 72 bp | TTGCTCTTGGAGGCTTGCTGGGCTGAGGGACACTTCTaGTGGGCTGGAATGATGGTGCCTTTCGGTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LLLEACWAEGHF*WAGMMVPFGGH Trigger: ATGCCCACCGAAAGGCACCATCATTCCAGCCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS CAA 90 bp | GGGACACTTCTGCTGGGCTGGAATGATGGTGCCTTTCGGTGGGCATaGCTTCTTGACCTGGGGAGCACATGGATCCTTGGTTTTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GTLLLGWNDGAFRWA*LLDLGSTWILGFGC Trigger: GCACCCAAAACCAAGGATCCATGTGCTCCCCAGGTCAAGAAGCAATGCCCACCGAAAGGCACCATCATTCCAGCCCAGCAGAAGTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 72 bp | TGCTGGGCTGGAATGATGGTGCCTTTCGGTGGGCATTaGTTCTTGACCTGGGGAGCACATGGATCCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: CWAGMMVPFGGH*FLTWGAHGSLV Trigger: AACCAAGGATCCATGTGCTCCCCAGGTCAAGAAGCAATGCCCACCGAAAGGCACCATCATTCCAGCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 72 bp | CCAGTCCATCCTTACTTCTGTTTGCTCTTGGAGGCTTaGTGGGCTGAGGGACACTTCTGCTGGGCTGGAATG | + |
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Preference number: 6 (lower is better) Translates to: PVHPYFCLLLEA*WAEGHFCWAGM Trigger: CATTCCAGCCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGTAAGGATGGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS CAA 72 bp | GCTGGAATGATGGTGCCTTTCGGTGGGCATTGCTTCTaGACCTGGGGAGCACATGGATCCTTGGTTTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: AGMMVPFGGHCF*TWGAHGSLVLG Trigger: ACCCAAAACCAAGGATCCATGTGCTCCCCAGGTCAAGAAGCAATGCCCACCGAAAGGCACCATCATTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS CCA 72 bp | ATGATGGTGCCTTTCGGTGGGCATTGCTTCTTGACCTaGGGAGCACATGGATCCTTGGTTTTGGGTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: MMVPFGGHCFLT*GAHGSLVLGAH Trigger: ATGTGCACCCAAAACCAAGGATCCATGTGCTCCCCAGGTCAAGAAGCAATGCCCACCGAAAGGCACCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS CCA 72 bp | GGTAATATCCAGTCCATCCTTACTTCTGTTTGCTCTTaGAGGCTTGCTGGGCTGAGGGACACTTCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GNIQSILTSVCS*RLAGLRDTSAG Trigger: CCCAGCAGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGTAAGGATGGACTGGATATTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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| CDS GCA 72 bp | GATGATGGTAATATCCAGTCCATCCTTACTTCTGTTTaGTCTTGGAGGCTTGCTGGGCTGAGGGACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: DDGNIQSILTSV*SWRLAGLRDTS Trigger: AGAAGTGTCCCTCAGCCCAGCAAGCCTCCAAGAGCAAACAGAAGTAAGGATGGACTGGATATTACCATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328051.3 |
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