Pregenerated sensors for SPRR2G (Homo sapiens)
Ensembl gene IDs: ENSG00000159516Ensembl transcript IDs: ENST00000368748.5
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAACCACCATCTACATCACAGACAGCAAAGCGAGATTAGGCAGTaGTCTGGCTGCTCATCTTCCAACAACATATCGGTTTTCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: RNHHLHHRQQSEIRQ*SGCSSSNNISVFRT Trigger: AGTTCTGAAAACCGATATGTTGTTGGAAGATGAGCAGCCAGATCACTGCCTAATCTCGCTTTGCTGTCTGTGATGTAGATGGTGGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| 3UTR-3UTR TCA 90 bp | ATAAACACACTTGCTCTCAGGATAGGAACCACCATCTACATCACAGACAGCAAACAGCTGAAGGGAAGATaGTGGAGTCCTGGGAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: INTLALRIGTTIYITDSKQLKGR*WSPGSK Trigger: CTTACTCCCAGGACTCCATCATCTTCCCTTCAGCTG...TTTGCTGTCTGTGATGTAGATGGTGGTTCCTATCCTGAGAGCAAGTGTGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAAGAATAAACACACTTGCTCTCAGGATAGGAACCACCATCTACATCACAGCCTCCCACTACAGCTaGAGGGAAGATGATGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: SKRINTLALRIGTTIYITASHYS*REDDGV Trigger: GACTCCATCATCTTCCCTTCAGCTGTAGTGGGAGGC...TGTGATGTAGATGGTGGTTCCTATCCTGAGAGCAAGTGTGTTTATTCTTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGAACTAAGCCTTTTCTCTGTCAACGCTCAAGCCAGACAGAGGTTAGGGAGTAAGAAGAGCCACTaGATCTTGTTGTTTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: FSELSLFSVNAQARQRLGSKKSH*ILLFHG Trigger: ACCATGAAACAACAAGATCCAGTGGCTCTTCTTACT...CCCTAACCTCTGTCTGGCTTGAGCGTTGACAGAGAAAAGGCTTAGTTCTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| 3UTR TCA 72 bp | GGAAGATGCAGCCTCCCACTACAGCTGAAGGGAAGATaGTGGAGTCCTGGGAGTAAGAAGAGCCACTGGATC | + |
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Preference number: 3 (lower is better) Translates to: GRCSLPLQLKGR*WSPGSKKSHWI Trigger: GATCCAGTGGCTCTTCTTACTCCCAGGACTCCATCATCTTCCCTTCAGCTGTAGTGGGAGGCTGCATCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| 3UTR TCA 72 bp | ACAGAGGTTAGGGAAGATGCAGCCTCCCACTACAGCTaGAGGGAAGATGATGGAGTCCTGGGAGTAAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: TEVREDAASHYS*REDDGVLGVRR Trigger: TCTTCTTACTCCCAGGACTCCATCATCTTCCCTTCAGCTGTAGTGGGAGGCTGCATCTTCCCTAACCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| 3UTR TCA 72 bp | CATCTACATCACAGACAGCAAAGCGAGATTAGGCAGTaGTCTGGCTGCTCATCTTCCAACAACATATCGGTT | + |
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Preference number: 3 (lower is better) Translates to: HLHHRQQSEIRQ*SGCSSSNNISV Trigger: AACCGATATGTTGTTGGAAGATGAGCAGCCAGATCACTGCCTAATCTCGCTTTGCTGTCTGTGATGTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| 3UTR-3UTR CAA 90 bp | AAAGCGAGATTAGGCAGTGATCTGGCTGCTCATCTTCCAACAACATATCGGTTTAGCCACTGGATCTTGTaGTTTCATGGTCCTGATGAA | + |
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Preference number: 3 (lower is better) Translates to: KARLGSDLAAHLPTTYRFSHWIL*FHGPDE Trigger: TTCATCAGGACCATGAAACAACAAGATCCAGTGGCT...AAACCGATATGTTGTTGGAAGATGAGCAGCCAGATCACTGCCTAATCTCGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR GCA 90 bp | CCTTTTCTCTGTCAACGCTCAAGCCAGACAGAGGTTAGGGAAGATGCAGCCTCCCAGGGTGGGTATGGTTaGACAGGAGGGCATTTATCC | + |
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Preference number: 4 (lower is better) Translates to: PFLCQRSSQTEVREDAASQGGYG*TGGHLS Trigger: GGATAAATGCCCTCCTGTGCAACCATACCCACCCTG...GGAGGCTGCATCTTCCCTAACCTCTGTCTGGCTTGAGCGTTGACAGAGAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR GCA 90 bp | GACAGCAAAGCGAGATTAGGCAGTGATCTGGCTGCTCATCTTCCAACAACATATGGTGGAGGTGGGCAATaGTCAGGTGGACAAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: DSKARLGSDLAAHLPTTYGGGGQ*SGGQGG Trigger: TCCTCCTTGTCCACCTGAGCATTGCCCACCTCCACC...ATATGTTGTTGGAAGATGAGCAGCCAGATCACTGCCTAATCTCGCTTTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGAACTAAGCCTTTTCTCTGTCAACGCTCAAGCCAGACAGAGGTTAGGCTTCTGCTGGCAGGGTaGGTATGGTTGCACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VFRTKPFLCQRSSQTEVRLLLAG*VWLHRR Trigger: CCTCCTGTGCAACCATACCCACCCTGCCAGCAGAAG...CCTAACCTCTGTCTGGCTTGAGCGTTGACAGAGAAAAGGCTTAGTTCTGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR TCA 90 bp | TTTTCAGAACTAAGCCTTTTCTCTGTCAACGCTCAAGCCAGACAGAGGTTAGGGGCCTCCCACTACAGCTaGAGGGAAGATGATGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FSELSLFSVNAQARQRLGASHYS*REDDGV Trigger: GACTCCATCATCTTCCCTTCAGCTGTAGTGGGAGGC...CCCTAACCTCTGTCTGGCTTGAGCGTTGACAGAGAAAAGGCTTAGTTCTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGAACTAAGCCTTTTCTCTGTCAACGCTCAAGCCAGACAGAGGTTAGGTGGGCAATGCTCAGGTaGACAAGGAGGAGGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: VFRTKPFLCQRSSQTEVRWAMLR*TRRRQV Trigger: TACCTGCCTCCTCCTTGTCCACCTGAGCATTGCCCA...CCTAACCTCTGTCTGGCTTGAGCGTTGACAGAGAAAAGGCTTAGTTCTGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACACTTGCTCTCAGGATAGGAACCACCATCTACATCACAGACAGCAAACTGGCATGGTGGAGGTaGGCAATGCTCAGGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: INTLALRIGTTIYITDSKLAWWR*AMLRWT Trigger: TGTCCACCTGAGCATTGCCCACCTCCACCATGCCAG...TTTGCTGTCTGTGATGTAGATGGTGGTTCCTATCCTGAGAGCAAGTGTGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR GCA 90 bp | CCTTTTCTCTGTCAACGCTCAAGCCAGACAGAGGTTAGGGAAGATGCAGCCTCCTCTAGTGATGTTACTTaGTCTTGGGTGGATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PFLCQRSSQTEVREDAASSSDVT*SWVDTS Trigger: AGAAGTATCCACCCAAGAGCAAGTAACATCACTAGA...GGAGGCTGCATCTTCCCTAACCTCTGTCTGGCTTGAGCGTTGACAGAGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CCA 90 bp | TCCAACAACATATCGGTTTTCAGAACTAAGCCTTTTCTCTGTCAACGCTCAAGCGGAGGGCATTTATCCTaGCATGGTGGAGGTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SNNISVFRTKPFLCQRSSGGHLS*HGGGGQ Trigger: TTGCCCACCTCCACCATGCCAGGATAAATGCCCTCC...GCTTGAGCGTTGACAGAGAAAAGGCTTAGTTCTGAAAACCGATATGTTGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR TCA 90 bp | CTGGCTGCTCATCTTCCAACAACATATCGGTTTTCAGAACTAAGCCTTTTCTCTAGCGAGATTAGGCAGTaGTCTGGCTGCTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LAAHLPTTYRFSELSLFSSEIRQ*SGCSSS Trigger: GGAAGATGAGCAGCCAGATCACTGCCTAATCTCGCT...AGAGAAAAGGCTTAGTTCTGAAAACCGATATGTTGTTGGAAGATGAGCAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CCA 90 bp | GTAAGAAGAGCCACTGGATCTTGTTGTTTCATGGTCCTGATGAATTCTAGTGATGCATTTATCCTGGCATaGTGGAGGTGGGCAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: VRRATGSCCFMVLMNSSDAFILA*WRWAML Trigger: GAGCATTGCCCACCTCCACCATGCCAGGATAAATGC...ATCACTAGAATTCATCAGGACCATGAAACAACAAGATCCAGTGGCTCTTCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR TCA 90 bp | TGCTCATCTTCCAACAACATATCGGTTTTCAGAACTAAGCCTTTTCTCTGTCAACAGCTGAAGGGAAGATaGTGGAGTCCTGGGAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: CSSSNNISVFRTKPFLCQQLKGR*WSPGSK Trigger: CTTACTCCCAGGACTCCATCATCTTCCCTTCAGCTG...TTGACAGAGAAAAGGCTTAGTTCTGAAAACCGATATGTTGTTGGAAGATGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CCA 90 bp | GACAGCAAAGCGAGATTAGGCAGTGATCTGGCTGCTCATCTTCCAACAACATATAGTAAGAAGAGCCACTaGATCTTGTTGTTTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: DSKARLGSDLAAHLPTTYSKKSH*ILLFHG Trigger: ACCATGAAACAACAAGATCCAGTGGCTCTTCTTACT...ATATGTTGTTGGAAGATGAGCAGCCAGATCACTGCCTAATCTCGCTTTGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS CCA 90 bp | GCAGGGTGGGTATGGTTGCACAGGAGGGCATTTATCCTGGCATGGTaGAGGTGGGCAATGCTCAGGTGGACAAGGAGGAGGCAGGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: AGWVWLHRRAFILAW*RWAMLRWTRRRQVR Trigger: CCTTACCTGCCTCCTCCTTGTCCACCTGAGCATTGCCCACCTCCACCATGCCAGGATAAATGCCCTCCTGTGCAACCATACCCACCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CAA 90 bp | CCTGGGAGTAAGAAGAGCCACTGGATCTTGTTGTTTCATGGTCCTGATGAATTCGCAGGGTGGGTATGGTaGCACAGGAGGGCATTTATC | + |
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Preference number: 5 (lower is better) Translates to: PGSKKSHWILLFHGPDEFAGWVW*HRRAFI Trigger: GATAAATGCCCTCCTGTGCAACCATACCCACCCTGC...GAATTCATCAGGACCATGAAACAACAAGATCCAGTGGCTCTTCTTACTCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CAA 90 bp | GGAGTCCTGGGAGTAAGAAGAGCCACTGGATCTTGTTGTTTCATGGTCCTGATGAGCCACTGGATCTTGTaGTTTCATGGTCCTGATGAA | + |
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Preference number: 5 (lower is better) Translates to: GVLGVRRATGSCCFMVLMSHWIL*FHGPDE Trigger: TTCATCAGGACCATGAAACAACAAGATCCAGTGGCT...CATCAGGACCATGAAACAACAAGATCCAGTGGCTCTTCTTACTCCCAGGACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CAA 90 bp | CCTGGGAGTAAGAAGAGCCACTGGATCTTGTTGTTTCATGGTCCTGATGAATTCAAGAGCCACTGGATCTaGTTGTTTCATGGTCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: PGSKKSHWILLFHGPDEFKSHWI*LFHGPD Trigger: ATCAGGACCATGAAACAACAAGATCCAGTGGCTCTT...GAATTCATCAGGACCATGAAACAACAAGATCCAGTGGCTCTTCTTACTCCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS-3UTR CAA 90 bp | TTTTCAGAACTAAGCCTTTTCTCTGTCAACGCTCAAGCCAGACAGAGGTTAGGGGAAACATGTGCTTTATaGGGGAGAAGCAAAAGAATA | + |
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Preference number: 5 (lower is better) Translates to: FSELSLFSVNAQARQRLGETCAL*GRSKRI Trigger: TATTCTTTTGCTTCTCCCCAATAAAGCACATGTTTC...CCCTAACCTCTGTCTGGCTTGAGCGTTGACAGAGAAAAGGCTTAGTTCTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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| CDS CCA 72 bp | CAGGGTGGGTATGGTTGCACAGGAGGGCATTTATCCTaGCATGGTGGAGGTGGGCAATGCTCAGGTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: QGGYGCTGGHLS*HGGGGQCSGGQ Trigger: TTGTCCACCTGAGCATTGCCCACCTCCACCATGCCAGGATAAATGCCCTCCTGTGCAACCATACCCACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368748.5 |
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