Pregenerated sensors for SPRR1B (Homo sapiens)

Ensembl gene IDs: ENSG00000169469

Ensembl transcript IDs: ENST00000307098.5

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	GACTCATACGCAGAATGGGATAGGGGATTCAGCATCTGGTGGCCGGCTCCTCAAGCTGGGAACTCATGCTaGAACAGTGACTGGTCCTGG	+
Preference number: 4 (lower is better) Translates to: DSYAEWDRGFSIWWPAPQAGNSC*NSDWSW Trigger: CCAGGACCAGTCACTGTTGCAGCATGAGTTCCCAGC...TTGAGGAGCCGGCCACCAGATGCTGAATCCCCTATCCCATTCTGCGTATGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307098.5
CDS-3UTR GCA 90 bp	GACTCATACGCAGAATGGGATAGGGGATTCAGCATCTGGTGGCCGGCTCCTCAAGCTGCTGGGAACTCATaGTGCAACAGTGACTGGTCC	+
Preference number: 4 (lower is better) Translates to: DSYAEWDRGFSIWWPAPQAAGNS*CNSDWS Trigger: GGACCAGTCACTGTTGCAGCATGAGTTCCCAGCAGC...TTGAGGAGCCGGCCACCAGATGCTGAATCCCCTATCCCATTCTGCGTATGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307098.5
CDS-3UTR CCA 90 bp	GACTCATACGCAGAATGGGATAGGGGATTCAGCATCTGGTGGCCGGCTCCTCAATGCTGCAACAGTGACTaGTCCTGGTGTGAAGAGAGG	+
Preference number: 4 (lower is better) Translates to: DSYAEWDRGFSIWWPAPQCCNSD*SWCEER Trigger: CCTCTCTTCACACCAGGACCAGTCACTGTTGCAGCA...TTGAGGAGCCGGCCACCAGATGCTGAATCCCCTATCCCATTCTGCGTATGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307098.5
CDS-3UTR CCA 90 bp	GACTCATACGCAGAATGGGATAGGGGATTCAGCATCTGGTGGCCGGCTCCTCAAGACTCATACGCAGAATaGGATAGGGGATTCAGCATC	+
Preference number: 4 (lower is better) Translates to: DSYAEWDRGFSIWWPAPQDSYAE*DRGFSI Trigger: GATGCTGAATCCCCTATCCCATTCTGCGTATGAGTC...TTGAGGAGCCGGCCACCAGATGCTGAATCCCCTATCCCATTCTGCGTATGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307098.5
CDS-3UTR CCA 90 bp	GACTCATACGCAGAATGGGATAGGGGATTCAGCATCTGGTGGCCGGCTCCTCAAAACAGTGACTGGTCCTaGTGTGAAGAGAGGAATACT	+
Preference number: 4 (lower is better) Translates to: DSYAEWDRGFSIWWPAPQNSDWS*CEERNT Trigger: AGTATTCCTCTCTTCACACCAGGACCAGTCACTGTT...TTGAGGAGCCGGCCACCAGATGCTGAATCCCCTATCCCATTCTGCGTATGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307098.5
CDS GCA 90 bp	GGCAAGGCTGTTTCACCTGCTGCTGCTGAAGCTGAGGGGGTGGGGTaGAAGGCTGCTTCTGCTGCTGGGAACTCATGCTGCAACAGTGAC	+
Preference number: 5 (lower is better) Translates to: GKAVSPAAAEAEGVG*KAASAAGNSCCNSD Trigger: GTCACTGTTGCAGCATGAGTTCCCAGCAGCAGAAGCAGCCTTGCACCCCACCCCCTCAGCTTCAGCAGCAGCAGGTGAAACAGCCTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307098.5
CDS CCA 72 bp	AGGCTGTTTCACCTGCTGCTGCTGAAGCTGAGGGGGTaGGGTGCAAGGCTGCTTCTGCTGCTGGGAACTCAT	+
Preference number: 6 (lower is better) Translates to: RLFHLLLLKLRG*GARLLLLLGTH Trigger: ATGAGTTCCCAGCAGCAGAAGCAGCCTTGCACCCCACCCCCTCAGCTTCAGCAGCAGCAGGTGAAACAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307098.5

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