RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPRN (Homo sapiens)

Ensembl gene IDs: ENSG00000203772

Ensembl transcript IDs: ENST00000414069.2

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGGGTCTGAGTTAGCTCCTGGCTCCACTGAGCAGGCCGTCAGCTaGCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGG +
Preference number: 1 (lower is better)
Translates to: LGSELAPGSTEQAVS*QPTTRIPRPCSEAW
Trigger: CCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGCCTGCTCAGTGGAGCCAGGAGCTAACTCAGACCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp GGCCAGGGGCATTGCTGGCAGTGTGGACGGGAGGCTGCAGGGCGCTaGCTCCTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGG +
Preference number: 1 (lower is better)
Translates to: GQGHCWQCGREAAGR*LLWLSALELESSAW
Trigger: CCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAGGAGGCAGCGCCCTGCAGCCTCCCGTCCACACTGCCAGCAATGCCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 90 bp CCCTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATaGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGT +
Preference number: 1 (lower is better)
Translates to: PWGMFRAGLRGTPCT*LCCAMTGRPPGMGS
Trigger: ACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp AGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTGTaGCCAGGGAGGCCTCTTCAGCGGGATTGGCAGTTGCTGTGCCCT +
Preference number: 1 (lower is better)
Translates to: RGCLQGNACTVQPVL*PGRPLQRDWQLLCP
Trigger: AGGGCACAGCAACTGCCAATCCCGCTGAAGAGGCCTCCCTGGGCACAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp GCTGCTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTaGAGCCTGTGCTGTGCCCAGGGAGGCCTCTTCAGCGGGATTGGC +
Preference number: 1 (lower is better)
Translates to: AASEEGAAFREMRAP*SLCCAQGGLFSGIG
Trigger: GCCAATCCCGCTGAAGAGGCCTCCCTGGGCACAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp CCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAACAGCTaGTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTG +
Preference number: 1 (lower is better)
Translates to: PTTRIPRPCSEAWNS*FRRRGCLQGNACTV
Trigger: CACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 90 bp AGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTaGAACAGCTGCTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCG +
Preference number: 1 (lower is better)
Translates to: SCQPTTRIPRPCSEA*NSCFRRRGCLQGNA
Trigger: CGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 90 bp CTTGGCCTGCTGGTCTTGGAGGCGTTGAGCTTGGTCTGGAAGGGGTaGAGGAGCGTCTGGGCTCACTGGGCCAGGGGCATTGCTGGCAGT +
Preference number: 1 (lower is better)
Translates to: LGLLVLEALSLVWKG*RSVWAHWARGIAGS
Trigger: ACTGCCAGCAATGCCCCTGGCCCAGTGAGCCCAGACGCTCCTCCACCCCTTCCAGACCAAGCTCAACGCCTCCAAGACCAGCAGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp GGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTaGTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGAC +
Preference number: 1 (lower is better)
Translates to: GMFRAGLRGTPCTWL*CAMTGRPPGMGSRD
Trigger: GTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR TCA 90 bp GACTGGAGAGCTAGAGAACGTGGCAGACCCAAGACCTCTCAGTGCTaGGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGGGAAGCAGA +
Preference number: 1 (lower is better)
Translates to: DWRARERGRPKTSQC*AHGGCPRLAGLGSR
Trigger: TCTGCTTCCCAGTCCCGCCAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGTTCTCTAGCTCTCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp GAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTaGTGTGCCCAGGGAGGCCTCTTCAGCGGGATTGGCAGTTGCTGT +
Preference number: 1 (lower is better)
Translates to: EEGAAFREMRAPCSL*CAQGGLFSGIGSCC
Trigger: ACAGCAACTGCCAATCCCGCTGAAGAGGCCTCCCTGGGCACAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 90 bp AGAAGGGCTTCTCTGCCTATGAGGATCTGGGGCAGGGCTTGGCCTTaGCCTGCTGGTCTTGGAGGCGTTGAGCTTGGTCTGGAAGGGGTG +
Preference number: 1 (lower is better)
Translates to: RRASLPMRIWGRAWP*PAGLGGVELGLEGV
Trigger: CACCCCTTCCAGACCAAGCTCAACGCCTCCAAGACCAGCAGGCCAAGGCCAAGCCCTGCCCCAGATCCTCATAGGCAGAGAAGCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 90 bp CCTCCTGGGGGAAATGTCAGAAGGGCTTCTCTGCCTATGAGGATCTaGGGCAGGGCTTGGCCTTGGCCTGCTGGTCTTGGAGGCGTTGAG +
Preference number: 1 (lower is better)
Translates to: PPGGNVRRASLPMRI*GRAWPWPAGLGGVE
Trigger: CTCAACGCCTCCAAGACCAGCAGGCCAAGGCCAAGCCCTGCCCCAGATCCTCATAGGCAGAGAAGCCCTTCTGACATTTCCCCCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 90 bp CGCTGCCTCCTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTaGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGA +
Preference number: 1 (lower is better)
Translates to: RCLLWLSALELESSA*LSPANSFQILTQAR
Trigger: TCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAGGAGGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp GTGCTGTGCCCAGGGAGGCCTCTTCAGCGGGATTGGCAGTTGCTGTaGCCTGAGAACAGGCAGAACTGTGTGATCCCTGAATGTGAACCT +
Preference number: 1 (lower is better)
Translates to: VLCPGRPLQRDWQLL*PENRQNCVIPECEP
Trigger: AGGTTCACATTCAGGGATCACACAGTTCTGCCTGTTCTCAGGGCACAGCAACTGCCAATCCCGCTGAAGAGGCCTCCCTGGGCACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 90 bp AATGTCAGAAGGGCTTCTCTGCCTATGAGGATCTGGGGCAGGGCTTaGCCTTGGCCTGCTGGTCTTGGAGGCGTTGAGCTTGGTCTGGAA +
Preference number: 1 (lower is better)
Translates to: NVRRASLPMRIWGRA*PWPAGLGGVELGLE
Trigger: TTCCAGACCAAGCTCAACGCCTCCAAGACCAGCAGGCCAAGGCCAAGCCCTGCCCCAGATCCTCATAGGCAGAGAAGCCCTTCTGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR TCA 90 bp AGCGGGATTGGCAGTTGCTGTGCCCTGAGAACAGGCAGAACTGTGTaGTCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTC +
Preference number: 1 (lower is better)
Translates to: SGIGSCCALRTGRTV*SLNVNLKFKGLGKL
Trigger: GAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTTCTCAGGGCACAGCAACTGCCAATCCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 90 bp TGCAGATCACGAAGTGTCCATCATAACTGGAACATTCCATCAGCTTaGAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTT +
Preference number: 1 (lower is better)
Translates to: CRSRSVHHNWNIPSA*SAVVCEGLVQLSPF
Trigger: AAATGGGCTGAGCTGCACCAGACCCTCACACACCACAGCACTGCAAGCTGATGGAATGTTCCAGTTATGATGGACACTTCGTGATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR TCA 90 bp TGGGGCAGGAAGTATTCAGGTTGGCTGTGTCAGATGCTAATGTGCTaGATCAACAGTCATTGCAGATCACGAAGTGTCCATCATAACTGG +
Preference number: 1 (lower is better)
Translates to: WGRKYSGWLCQMLMC*INSHCRSRSVHHNW
Trigger: CCAGTTATGATGGACACTTCGTGATCTGCAATGACTGTTGATTCAGCACATTAGCATCTGACACAGCCAACCTGAATACTTCCTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGTGGGAGGTGGCAGGCTaGGGCGGCGTGGGCAGGACG +
Preference number: 2 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGWEVAG*GGVGRT
Trigger: CGTCCTGCCCACGCCGCCTCAGCCTGCCACCTCCCA...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCGGGGAAGGCAGAGGCTaGCAGGGCCCGTGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTGEGRG*QGPWWV
Trigger: CACCCACCACGGGCCCTGCCAGCCTCTGCCTTCCCC...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGCATGGGTGTCCTGCTaGGCGCTGGGCCCCGCCACT +
Preference number: 2 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCAWVSC*ALGPAT
Trigger: AGTGGCGGGGCCCAGCGCCCAGCAGGACACCCATGC...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGGGGTGGAGGAGCGTCTaGGCTCACTGGGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGGWRSV*AHWARG
Trigger: GCCCCTGGCCCAGTGAGCCCAGACGCTCCTCCACCC...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGGGCAGGACGGTGGATaGCGGGTCCACAGGGACAGC +
Preference number: 2 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCGQDGG*RVHRDS
Trigger: GCTGTCCCTGTGGACCCGCCATCCACCGTCCTGCCC...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCAGGCTGAGGCGGCGTaGGCAGGACGGTGGATGGCG +
Preference number: 2 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPQAEAA*AGRWMA
Trigger: CGCCATCCACCGTCCTGCCCACGCCGCCTCAGCCTG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTGGCCAGGGGCATTGCTaGCAGTGTGGACGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASGQGHC*QCGREA
Trigger: AGCCTCCCGTCCACACTGCCAGCAATGCCCCTGGCC...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGGAGCAGGCCGTCAGCTaGCAGCCCACCACGCGGATA +
Preference number: 2 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGEQAVS*QPTTRI
Trigger: TATCCGCGTGGTGGGCTGGCAGCTGACGGCCTGCTC...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCCTCTAGGTGGGAGGTaGCAGGCTGAGGCGGCGTGG +
Preference number: 2 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPPLGGR*QAEAAW
Trigger: CCACGCCGCCTCAGCCTGCCACCTCCCACCTAGAGG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTCGCAGAGAGCCAGGATaGACGTTCCTCGGACGGACG +
Preference number: 2 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASRREPG*TFLGRT
Trigger: CGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCG...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGGGGATGCAGTCCGGCTaGGGGCGAGGCTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: AWLSPANSFQILTQARTQGMQSG*GRGCPQ
Trigger: CTGGGGACAGCCTCGCCCTCAGCCGGACTGCATCCC...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTCCTGAAGTTAGCCCCTaGGTGCCACCTGCATCGTGC +
Preference number: 2 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASPEVSP*VPPASC
Trigger: GCACGATGCAGGTGGCACTCAGGGGCTAACTTCAGG...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCGTGCCACCTGCATCGTaGCATAACCCTGACCGCCTG +
Preference number: 2 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTVPPAS*HNPDRL
Trigger: CAGGCGGTCAGGGTTATGGCACGATGCAGGTGGCAC...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGGCTCAGCCTCTTGCATaGGTGTCCTGCTGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGAQPLA*VSCWAL
Trigger: CAGCGCCCAGCAGGACACCCATGCAAGAGGCTGAGC...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCCAGGCTGGCGGGACTaGGAAGCAGAGGGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPPGWRD*EAEGWS
Trigger: AGACCAGCCCTCTGCTTCCCAGTCCCGCCAGCCTGG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCTTCCAGGTGGGCATCTaGAAAGTTGAGGGGGCTCCG +
Preference number: 2 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTFQVGI*KVEGAP
Trigger: CGGAGCCCCCTCAACTTTGCAGATGCCCACCTGGAA...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACGCTGGGCCCCGCCACTaGCCCCCTGCTTGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: LWLSALELESSAWLSPANAGPRH*PPACFG
Trigger: CCCAAAGCAAGCAGGGGGCCAGTGGCGGGGCCCAGC...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGGCTTGCTTTGGGGTCTaGGTTAGCTCCTGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGACFGV*VSSWLH
Trigger: GTGGAGCCAGGAGCTAACTCAGACCCCAAAGCAAGC...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACCAGGCCCAGGAGGGATaGAGTCCGGCTGAGGGCGAG +
Preference number: 2 (lower is better)
Translates to: LWLSALELESSAWLSPANQAQEG*SPAEGE
Trigger: CTCGCCCTCAGCCGGACTGCATCCCTCCTGGGCCTG...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCCCTACCCTGGATGAGTaGGTGACTGGAGAGCTAGAG +
Preference number: 2 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTPTLDE*VTGELE
Trigger: CTCTAGCTCTCCAGTCACCCACTCATCCAGGGTAGG...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGGGCTGGCAGGGCCCGTaGTGGGTGCTGGTCTTGACT +
Preference number: 2 (lower is better)
Translates to: AWLSPANSFQILTQARTQGWQGP*WVLVLT
Trigger: AGTCAAGACCAGCACCCACCACGGGCCCTGCCAGCC...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTTGGTCTGGAAGGGGTaGAGGAGCGTCTGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPLVWKG*RSVWAH
Trigger: GTGAGCCCAGACGCTCCTCCACCCCTTCCAGACCAA...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGCAGCTTGCAGTGCTGTaGTGTGTGAGGGTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGQLAVL*CVRVWC
Trigger: GCACCAGACCCTCACACACCACAGCACTGCAAGCTG...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGGTCTTGGAGGCGTTaGGCTTGGTCTGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPWSWRR*AWSGRG
Trigger: ACCCCTTCCAGACCAAGCTCAACGCCTCCAAGACCA...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCGCGTGGGCAGGACGGTaGATGGCGGGTCCACAGGGA +
Preference number: 2 (lower is better)
Translates to: LELESSAWLSPANSFQILAWAGR*MAGPQG
Trigger: TCCCTGTGGACCCGCCATCCACCGTCCTGCCCACGC...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCGTTGTTGGAGCAAAGTaGGTCTCTCACGGATCTCGG +
Preference number: 2 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTVVGAK*VSHGSR
Trigger: CCGAGATCCGTGAGAGACCCACTTTGCTCCAACAAC...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCATCACGGATCTCGGCCTaGGGGTGTGGGGGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: AREQCLVESCQQLPDPHPSRISA*GCGGEG
Trigger: GCCTTCTCCCCCACACCCTCAGGCCGAGATCCGTGA...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACCCGCCACTGGCCCCCTaGTTGCTTTGGGGTCTGAGT +
Preference number: 2 (lower is better)
Translates to: LWLSALELESSAWLSPANPPLAP*LLWGLS
Trigger: ACTCAGACCCCAAAGCAAGCAGGGGGCCAGTGGCGG...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCACAGGTGTGTCCAGTaGTGGAGGCAAGTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPHRCVQ*WRQVLV
Trigger: GACAAGGACTTGCCTCCAGCACTGGACACACCTGTG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGTCCGGTGGGTCTCTCTaGTGTGAGGAGACTCAGACC +
Preference number: 2 (lower is better)
Translates to: GRVEGDALHMALLCNDWKSGGSL*CEETQT
Trigger: GGTCTGAGTCTCCTCACAGCAGAGAGACCCACCGGA...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CAA 90 bp TGCCTCCTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTaGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACC +
Preference number: 2 (lower is better)
Translates to: CLLWLSALELESSAW*SPANSFQILTQART
Trigger: GGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAGGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGACAGGCAGAACTGTGTaGTCCCTGAATGTGAACCTG +
Preference number: 2 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGTGRTV*SLNVNL
Trigger: CAGGTTCACATTCAGGGATCACACAGTTCTGCCTGT...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACTGGCAGGGCCCGTGGTaGGTGCTGGTCTTGACTTTG +
Preference number: 2 (lower is better)
Translates to: LWLSALELESSAWLSPANWQGPW*VLVLTL
Trigger: CAAAGTCAAGACCAGCACCCACCACGGGCCCTGCCA...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCGAGGCCTGGAACAGCTaGTTCCGAAGAAGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: LELESSAWLSPANSFQILEAWNS*FRRRGC
Trigger: GCAGCCCCTTCTTCGGAAGCAGCTGTTCCAGGCCTC...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGAAGTTAGCCCCTGAGTaGCACCTGCATCGTGCCATA +
Preference number: 2 (lower is better)
Translates to: GRVEGDALHMALLCNDWKKLAPE*HLHRAI
Trigger: TATGGCACGATGCAGGTGGCACTCAGGGGCTAACTT...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCACTTCAGGGAAATGCGTaGACCGTGCAGCCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: AREQCLVESCQQLPDPHPLQGNA*TVQPVL
Trigger: CAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAG...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCCCCTGTTCCGAGGCCTaGAACAGCTGCTTCCGAAGA +
Preference number: 2 (lower is better)
Translates to: LELESSAWLSPANSFQILPCSEA*NSCFRR
Trigger: TCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGG...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCACCTGTCCTTGGATGTTaGGGGGCTCAGCCTCTTGCA +
Preference number: 2 (lower is better)
Translates to: AREQCLVESCQQLPDPHPPVLGC*GAQPLA
Trigger: TGCAAGAGGCTGAGCCCCCCAACATCCAAGGACAGG...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGTGGGTGCTGGTCTTaGCTTTGGTGTCCACTGAGT +
Preference number: 2 (lower is better)
Translates to: AREQCLVESCQQLPDPHPGGCWS*LWCPLS
Trigger: ACTCAGTGGACACCAAAGTCAAGACCAGCACCCACC...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCCAGATGCTAATGTGCTaGATCAACAGTCATTGCAGA +
Preference number: 2 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCQMLMC*INSHCR
Trigger: TCTGCAATGACTGTTGATTCAGCACATTAGCATCTG...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR GCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCATTCCGAAGAAGGGGCTaGCTTCAGGGAAATGCGTGC +
Preference number: 2 (lower is better)
Translates to: AREQCLVESCQQLPDPHPFRRRG*LQGNAC
Trigger: GCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAA...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCTTGTTTCAAGTTGTTaGAGCAAAGTGGGTCTCTCA +
Preference number: 2 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPLVSSC*SKVGLS
Trigger: TGAGAGACCCACTTTGCTCCAACAACTTGAAACAAG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR TCA 90 bp GAGAACGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCACTAAGGAGGGTAAAGTaGCTTGTTTCAAGTTGTTGG +
Preference number: 2 (lower is better)
Translates to: ENVADPRPLSAEPMEDAPLRRVK*LVSSCW
Trigger: CCAACAACTTGAAACAAGTCACTTTACCCTCCTTAG...TGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CAA 90 bp GCATCGTGCCATAACCCTGACCGCCTGGGGCAGGAAGTATTCAGGTaGGCTGTGTCAGATGCTAATGTGCTGAATCAACAGTCATTGCAG +
Preference number: 2 (lower is better)
Translates to: ASCHNPDRLGQEVFR*AVSDANVLNQQSLQ
Trigger: CTGCAATGACTGTTGATTCAGCACATTAGCATCTGACACAGCCAACCTGAATACTTCCTGCCCCAGGCGGTCAGGGTTATGGCACGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp GAGAACGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGAAGTTCAAAGGACTTaGAAAGCTCTGGAATGTGTT +
Preference number: 2 (lower is better)
Translates to: ENVADPRPLSAEPMEDAPEVQRT*KALECV
Trigger: AACACATTCCAGAGCTTTCCAAGTCCTTTGAACTTC...TGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAATTTCACTGCTTCTTTTaGGGAGGGTCAGATTCCTCA +
Preference number: 2 (lower is better)
Translates to: CVIPECEPEVQRTWKALEFHCFF*GGSDSS
Trigger: TGAGGAATCTGACCCTCCCCAAAAGAAGCAGTGAAA...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR TCA 72 bp GCAGAGGCTGGCAGGGCCCGTGGTGGGTGCTGGTCTTaGCTTTGGTGTCCACTGAGTCCCGAGGCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: AEAGRARGGCWS*LWCPLSPEAQA
Trigger: GGCCTGAGCCTCGGGACTCAGTGGACACCAAAGTCAAGACCAGCACCCACCACGGGCCCTGCCAGCCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp AGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTaGTGTGCAATGACTGGAAGGCCGCCCGGCATGGGC +
Preference number: 3 (lower is better)
Translates to: RAGLRGTPCTWL*CAMTGRPPGMG
Trigger: GCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp GCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTaGTGTGCCCAGGGAGGCCTCTTCAGCGGGATTGGC +
Preference number: 3 (lower is better)
Translates to: AAFREMRAPCSL*CAQGGLFSGIG
Trigger: GCCAATCCCGCTGAAGAGGCCTCCCTGGGCACAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 72 bp CCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTaGAACAGCTGCTTCCGAAGAAGGGGCTGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: PTTRIPRPCSEA*NSCFRRRGCLQ
Trigger: CTGAAGGCAGCCCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp TGCTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTaGACCGTGCAGCCTGTGCTGTGCCCAGGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: CFRRRGCLQGNA*TVQPVLCPGRP
Trigger: AGGCCTCCCTGGGCACAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp CAGCTGCTTCCGAAGAAGGGGCTGCCTTCAGGGAAATaGGTGCACCGTGCAGCCTGTGCTGTGCCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: QLLPKKGLPSGK*VHRAACAVPRE
Trigger: CTCCCTGGGCACAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 72 bp ATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATaGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGC +
Preference number: 3 (lower is better)
Translates to: MFRAGLRGTPCT*LCCAMTGRPPG
Trigger: GCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CAA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTGGTGGGTGCTGGTCTaGACTTTGGTGTCCACTGAG +
Preference number: 3 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASWWVLV*TLVSTE
Trigger: CTCAGTGGACACCAAAGTCAAGACCAGCACCCACCA...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp TCCGAGGCCTGGAACAGCTGCTTCCGAAGAAGGGGCTaGCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTG +
Preference number: 3 (lower is better)
Translates to: SEAWNSCFRRRG*LQGNACTVQPV
Trigger: CACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp CGGATACCCAGGCCCTGTTCCGAGGCCTGGAACAGCTaGTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCG +
Preference number: 3 (lower is better)
Translates to: RIPRPCSEAWNS*FRRRGCLQGNA
Trigger: CGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp TGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTaGACATGGCTTTGCTGTGCAATGACTGGAAGGCCG +
Preference number: 3 (lower is better)
Translates to: WGMFRAGLRGTP*TWLCCAMTGRP
Trigger: CGGCCTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp GGGTCTCTCTGCTGTGAGGAGACTCAGACCACCCCCTaGCTCCTGGGGGAAATGTCAGAAGGGCTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: GSLCCEETQTTP*LLGEMSEGLLC
Trigger: GCAGAGAAGCCCTTCTGACATTTCCCCCAGGAGGCAGGGGGTGGTCTGAGTCTCCTCACAGCAGAGAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 72 bp CCTGTGCTGTGCCCAGGGAGGCCTCTTCAGCGGGATTaGCAGTTGCTGTGCCCTGAGAACAGGCAGAACTGT +
Preference number: 3 (lower is better)
Translates to: PVLCPGRPLQRD*QLLCPENRQNC
Trigger: ACAGTTCTGCCTGTTCTCAGGGCACAGCAACTGCCAATCCCGCTGAAGAGGCCTCCCTGGGCACAGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CAA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCGGCCCCCTGCTTGCTTaGGGGTCTGAGTTAGCTCCT +
Preference number: 3 (lower is better)
Translates to: LELESSAWLSPANSFQILGPLLA*GSELAP
Trigger: AGGAGCTAACTCAGACCCCAAAGCAAGCAGGGGGCC...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp CCAGGGAGGCCTCTTCAGCGGGATTGGCAGTTGCTGTaGCCTGAGAACAGGCAGAACTGTGTGATCCCTGAA +
Preference number: 3 (lower is better)
Translates to: PGRPLQRDWQLL*PENRQNCVIPE
Trigger: TTCAGGGATCACACAGTTCTGCCTGTTCTCAGGGCACAGCAACTGCCAATCCCGCTGAAGAGGCCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR GCA 72 bp TGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTaGCAACAGCTTCCAGATCCTCACCCAGGCCAGAAC +
Preference number: 3 (lower is better)
Translates to: CPGAREQCLVES*QQLPDPHPGQN
Trigger: GTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 72 bp TCTGCTGTGAGGAGACTCAGACCACCCCCTGCCTCCTaGGGGAAATGTCAGAAGGGCTTCTCTGCCTATGAG +
Preference number: 3 (lower is better)
Translates to: SAVRRLRPPPAS*GKCQKGFSAYE
Trigger: CTCATAGGCAGAGAAGCCCTTCTGACATTTCCCCCAGGAGGCAGGGGGTGGTCTGAGTCTCCTCACAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CAA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGACTTGTTTCAAGTTGTaGGAGCAAAGTGGGTCTCTC +
Preference number: 3 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGTCFKL*EQSGSL
Trigger: GAGAGACCCACTTTGCTCCAACAACTTGAAACAAGT...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CAA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACGTGCTGGTCTTGACTTaGGTGTCCACTGAGTCCCGA +
Preference number: 3 (lower is better)
Translates to: LWLSALELESSAWLSPANVLVLT*VSTESR
Trigger: TCGGGACTCAGTGGACACCAAAGTCAAGACCAGCAC...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CAA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGCAGGAAGTATTCAGGTaGGCTGTGTCAGATGCTAAT +
Preference number: 3 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGQEVFR*AVSDAN
Trigger: ATTAGCATCTGACACAGCCAACCTGAATACTTCCTG...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 72 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTaGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACC +
Preference number: 3 (lower is better)
Translates to: LWLSALELESSA*LSPANSFQILT
Trigger: GGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 72 bp TTCCATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTCTaGTGCAGCTCAGCCCATTTTCCAGGTGGGCATCTG +
Preference number: 3 (lower is better)
Translates to: FHQLAVLWCVRV*CSSAHFPGGHL
Trigger: CAGATGCCCACCTGGAAAATGGGCTGAGCTGCACCAGACCCTCACACACCACAGCACTGCAAGCTGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR-3UTR CAA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCGTGACTTGTTTCAAGTaGTTGGAGCAAAGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPVTCFK*LEQSGS
Trigger: AGACCCACTTTGCTCCAACAACTTGAAACAAGTCAC...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CCA 72 bp AACAGTCATTGCAGATCACGAAGTGTCCATCATAACTaGAACATTCCATCAGCTTGCAGTGCTGTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: NSHCRSRSVHHN*NIPSACSAVVC
Trigger: ACACACCACAGCACTGCAAGCTGATGGAATGTTCCAGTTATGATGGACACTTCGTGATCTGCAATGACTGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR TCA 72 bp AAGTATTCAGGTTGGCTGTGTCAGATGCTAATGTGCTaGATCAACAGTCATTGCAGATCACGAAGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: KYSGWLCQMLMC*INSHCRSRSVH
Trigger: ATGGACACTTCGTGATCTGCAATGACTGTTGATTCAGCACATTAGCATCTGACACAGCCAACCTGAATACTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTCTCCGCGGCCGCCCTTaGCTGCGCCGCTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASLRGRP*LRRCRR
Trigger: TCTGCGACAGCGGCGCAGCCAAGGGCGGCCGCGGAG...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTGGGTGGAGGAGCGTCTaGGCTCACTGGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASGWRSV*AHWARG
Trigger: GCCCCTGGCCCAGTGAGCCCAGACGCTCCTCCACCC...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCGGGCAGGACGGTGGATaGCGGGTCCACAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTGQDGG*RVHRDS
Trigger: GCTGTCCCTGTGGACCCGCCATCCACCGTCCTGCCC...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGGCGTGGGCAGGACGGTaGATGGCGGGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGAWAGR*MAGPQG
Trigger: TCCCTGTGGACCCGCCATCCACCGTCCTGCCCACGC...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TCCCACCAGCCGCAGAGAGCCAGGATGGACGTTCCTCGGACGGACGGTTTTCCTCAGGCTGAGGCGGCGTaGGCAGGACGGTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SHQPQRARMDVPRTDGFPQAEAA*AGRWMA
Trigger: CGCCATCCACCGTCCTGCCCACGCCGCCTCAGCCTG...AGGAAAACCGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCGGCTGGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTGTGGCCCCTCTTTGCTaGCTGGCTGCCTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASVAPLC*LAASAA
Trigger: GGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCAC...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCGCAGAGCCCAAGCACTaGCTTCGCCCCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTAEPKH*LRPSVP
Trigger: GGGCACTGAGGGGCGAAGCCAGTGCTTGGGCTCTGC...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CAA 72 bp GGCTGGCAGGGCCCGTGGTGGGTGCTGGTCTTGACTTaGGTGTCCACTGAGTCCCGAGGCTCAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GWQGPWWVLVLT*VSTESRGSGPG
Trigger: TCCTGGGCCTGAGCCTCGGGACTCAGTGGACACCAAAGTCAAGACCAGCACCCACCACGGGCCCTGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CAA 72 bp CCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTaGCGGTGGTGGCCTGACCGTCCCACAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGTSCAEAPAAS*RWWPDRPTAAS
Trigger: GGAGGCTGCTGTGGGACGGTCAGGCCACCACCGCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CAA 72 bp CAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTaGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QGRVEGDALHMA*LCNDWKAARHG
Trigger: CCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCTCACGGATCTCGGCCTaGGGGTGTGGGGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCSRISA*GCGGEG
Trigger: GCCTTCTCCCCCACACCCTCAGGCCGAGATCCGTGA...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTGGCTTTGCTGTGCAATaGCTGGAAGGCCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASGFAVQ*LEGRPA
Trigger: TGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCC...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCCGCAGAGAGCCAGGATaGACGTTCCTCGGACGGACG +
Preference number: 4 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTRREPG*TFLGRT
Trigger: CGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCG...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGGGGAAGGCAGAGGCTaGCAGGGCCCGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GRVEGDALHMALLCNDWKGEGRG*QGPWWV
Trigger: CACCCACCACGGGCCCTGCCAGCCTCTGCCTTCCCC...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGGGCCAGGGGCATTGCTaGCAGTGTGGACGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGGQGHC*QCGREA
Trigger: AGCCTCCCGTCCACACTGCCAGCAATGCCCCTGGCC...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCGAGCAGGCCGTCAGCTaGCAGCCCACCACGCGGATA +
Preference number: 4 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPEQAVS*QPTTRI
Trigger: TATCCGCGTGGTGGGCTGGCAGCTGACGGCCTGCTC...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCCTGGCTGGCTGCCTCTaGTGCCCCATACCCCACACA +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCLAGCL*CPIPHT
Trigger: TGTGTGGGGTATGGGGCAGCAGAGGCAGCCAGCCAG...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGCTCAGCCTCTTGCATaGGTGTCCTGCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCAQPLA*VSCWAL
Trigger: CAGCGCCCAGCAGGACACCCATGCAAGAGGCTGAGC...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TCCCACCAGCCGCAGAGAGCCAGGATGGACGTTCCTCGGACGGACGGTTTTCCTCCAGGCTGGCGGGACTaGGAAGCAGAGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SHQPQRARMDVPRTDGFPPGWRD*EAEGWS
Trigger: AGACCAGCCCTCTGCTTCCCAGTCCCGCCAGCCTGG...AGGAAAACCGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCGGCTGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGCTGCCTCTTTGCGGTaGTGGCCTGACCGTCCCACA +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCAASLR*WPDRPT
Trigger: TGTGGGACGGTCAGGCCACCACCGCAAAGAGGCAGC...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCCAGTGCTGTGGTGTGTaGGGGTCTGGTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCQCCGV*GSGAAQ
Trigger: CTGAGCTGCACCAGACCCTCACACACCACAGCACTG...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGCCAGCACGTTGCGGGTaGCCAGTTCATCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGPARCG*PVHLRG
Trigger: CCCACGAAGATGAACTGGGCACCCGCAACGTGCTGG...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCAGCGGGATTGGCAGTTaGTGTGCCCTGAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTSGIGS*CALRTG
Trigger: GCCTGTTCTCAGGGCACAGCAACTGCCAATCCCGCT...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TCCCACCAGCCGCAGAGAGCCAGGATGGACGTTCCTCGGACGGACGGTTTTCCTGTGCAGCCTGTGCTGTaGCCAGGGAGGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SHQPQRARMDVPRTDGFPVQPVL*PGRPLQ
Trigger: CTGAAGAGGCCTCCCTGGGCACAGCACAGGCTGCAC...AGGAAAACCGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCGGCTGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTCTTCAGGGAAATGCGTaGACCGTGCAGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASLQGNA*TVQPVL
Trigger: CAGCACAGGCTGCACGGTGCACGCATTTCCCTGAAG...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGCAGGCCCAGGAGGGATaGAGTCCGGCTGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: AWLSPANSFQILTQARTQQAQEG*SPAEGE
Trigger: CTCGCCCTCAGCCGGACTGCATCCCTCCTGGGCCTG...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCTCTTTGCTGGCTGGCTaGCTCTGCTGCCCCATACCC +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCSLLAG*LCCPIP
Trigger: GGGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGA...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCGCCAGGGACATCCTGTaGAGAAGCTCCGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPARDIL*RSSGCL
Trigger: GAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGC...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGGCTGGCAGGGCCCGTaGTGGGTGCTGGTCTTGACT +
Preference number: 4 (lower is better)
Translates to: GRVEGDALHMALLCNDWKGWQGP*WVLVLT
Trigger: AGTCAAGACCAGCACCCACCACGGGCCCTGCCAGCC...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCTTGGTCTGGAAGGGGTaGAGGAGCGTCTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCLVWKG*RSVWAH
Trigger: GTGAGCCCAGACGCTCCTCCACCCCTTCCAGACCAA...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCCACCCCCTGCCTCCTaGGGGAAATGTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPPPPAS*GKCQKG
Trigger: GCCCTTCTGACATTTCCCCCAGGAGGCAGGGGGTGG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTGGCCCTGGTGCTCAGTaGCCCCTCTTTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPKKGLPSGKCVHRAACAGPGAQ*PLFAGW
Trigger: CCAGCCAGCAAAGAGGGGCCACTGAGCACCAGGGCC...AGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp CTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTAGGACATGGAGAGGGTaGGATCCCAAGGCCACGGCG +
Preference number: 4 (lower is better)
Translates to: LPKKGLPSGKCVHRAACARTWRG*DPKATA
Trigger: CGCCGTGGCCTTGGGATCTCACCCTCTCCATGTCCT...AGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGCGGCCGCCCTTGGCTaGGCCGCTGTCGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: AREQCLVESCQQLPDPHPAAALG*AAVAEE
Trigger: TTCCTCTGCGACAGCGGCGCAGCCAAGGGCGGCCGC...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGCCGCCACTGGCCCCCTaGTTGCTTTGGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRVEGDALHMALLCNDWKPPLAP*LLWGLS
Trigger: ACTCAGACCCCAAAGCAAGCAGGGGGCCAGTGGCGG...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTCACAGGTGTGTCCAGTaGTGGAGGCAAGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASHRCVQ*WRQVLV
Trigger: GACAAGGACTTGCCTCCAGCACTGGACACACCTGTG...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGTCCGGTGGGTCTCTCTaGTGTGAGGAGACTCAGACC +
Preference number: 4 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGSGGSL*CEETQT
Trigger: GGTCTGAGTCTCCTCACAGCAGAGAGACCCACCGGA...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGCTGGCTGCCTCTGCTaGCCCATACCCCACACACTC +
Preference number: 4 (lower is better)
Translates to: GRVEGDALHMALLCNDWKAGCLC*PIPHTL
Trigger: GAGTGTGTGGGGTATGGGGCAGCAGAGGCAGCCAGC...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGCCCTGTTCCGAGGCCTaGAACAGCTGCTTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGPCSEA*NSCFRR
Trigger: TCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGG...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCCAGCTTGCAGTGCTGTaGTGTGTGAGGGTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCQLAVL*CVRVWC
Trigger: GCACCAGACCCTCACACACCACAGCACTGCAAGCTG...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp GAGAACGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCAAGTCCTTGTCGTaGCTGTCCAGCGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: ENVADPRPLSAEPMEDAPGKSLS*LSSATP
Trigger: TGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCC...TGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp TGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGGTGGGTGCTGGTCTTaGCTTTGGTGTCCACTGAGT +
Preference number: 4 (lower is better)
Translates to: CRTWGQGHPVQKLRLPLCGGCWS*LWCPLS
Trigger: ACTCAGTGGACACCAAAGTCAAGACCAGCACCCACC...GCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACTTTGCGGTGGTGGCCTaGCCGTCCCACAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANFAVVA*PSHSSL
Trigger: GAGGCTGCTGTGGGACGGTCAGGCCACCACCGCAAA...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TCCCACCAGCCGCAGAGAGCCAGGATGGACGTTCCTCGGACGGACGGTTTTCCTCTGCCTTCAGGGAAATaGGTGCACCGTGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SHQPQRARMDVPRTDGFPLPSGK*VHRAAC
Trigger: ACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAG...AGGAAAACCGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCGGCTGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTGAGGCCTGGAACAGCTaGTTCCGAAGAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPKKGLPSGKCVHRAACAEAWNS*FRRRGC
Trigger: GCAGCCCCTTCTTCGGAAGCAGCTGTTCCAGGCCTC...AGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACGAGGCTGCAGGGCGCTaGCTCCTGTGGCTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANEAAGR*LLWLSA
Trigger: GGCACTAAGCCACAGGAGGCAGCGCCCTGCAGCCTC...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGCACATGGCTTTGCTGTaGAATGACTGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGHMALL*NDWKAA
Trigger: GGCGGCCTTCCAGTCATTGCACAGCAAAGCCATGTG...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCCCTCTAGGTGGGAGGTaGCAGGCTGAGGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LELESSAWLSPANSFQILPLGGR*QAEAAW
Trigger: CCACGCCGCCTCAGCCTGCCACCTCCCACCTAGAGG...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TCCCACCAGCCGCAGAGAGCCAGGATGGACGTTCCTCGGACGGACGGTTTTCCTCCTCTTCAGCGGGATTaGCAGTTGCTGTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SHQPQRARMDVPRTDGFPPLQRD*QLLCPE
Trigger: CTCAGGGCACAGCAACTGCCAATCCCGCTGAAGAGG...AGGAAAACCGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCGGCTGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCCTGTCCTTGGATGTTaGGGGGCTCAGCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPPVLGC*GAQPLA
Trigger: TGCAAGAGGCTGAGCCCCCCAACATCCAAGGACAGG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCGTCTGGGCTCACTaGGCCAGGGGCATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANSVWAH*ARGIAG
Trigger: GCCAGCAATGCCCCTGGCCCAGTGAGCCCAGACGCT...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GAGAACGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCACTGCCTATGAGGATCTaGGGCAGGGCTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ENVADPRPLSAEPMEDAPLPMRI*GRAWPW
Trigger: CCAAGGCCAAGCCCTGCCCCAGATCCTCATAGGCAG...TGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTGGTGTGTGAGGGTCTaGTGCAGCTCAGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASWCVRV*CSSAHF
Trigger: AAAATGGGCTGAGCTGCACCAGACCCTCACACACCA...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGAAGGCCGCCCGGCATaGGCAGTAGAGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: AREQCLVESCQQLPDPHPEGRPA*AVETPG
Trigger: GCCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTC...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAAGCTCCTGGCTCCACTaGGCAGGCCGTCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AREQCLVESCQQLPDPHPSSWLH*AGRQLP
Trigger: TGGCAGCTGACGGCCTGCTCAGTGGAGCCAGGAGCT...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp CTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTTGGTCTTGGAGGCGTTaGGCTTGGTCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LPKKGLPSGKCVHRAACAWSWRR*AWSGRG
Trigger: ACCCCTTCCAGACCAAGCTCAACGCCTCCAAGACCA...AGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTGCTTGGTTGAGTCCTaGCAACAGCTTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASCLVES*QQLPDP
Trigger: AGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCA...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGGTGCCACCTGCATCGTaGCATAACCCTGACCGCCTG +
Preference number: 4 (lower is better)
Translates to: AWLSPANSFQILTQARTQVPPAS*HNPDRL
Trigger: CAGGCGGTCAGGGTTATGGCACGATGCAGGTGGCAC...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACTGCAGAAGCTCCGGCTaGCTCTTTGCGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANCRSSG*LFAVVA
Trigger: GGCCACCACCGCAAAGAGGCAGCCGGAGCTTCTGCA...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGCCCTGCACATGGCTTTaGTGTGCAATGACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGPCTWL*CAMTGR
Trigger: CCTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGG...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCTTCGCCCCTCAGTaGCCTGGGGCATGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AREQCLVESCQQLPDPHPGFAPQ*PGACSG
Trigger: CCCTGAACATGCCCCAGGGCACTGAGGGGCGAAGCC...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGTGGCAGGGCCCGTGGTaGGTGCTGGTCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: AWLSPANSFQILTQARTQWQGPW*VLVLTL
Trigger: CAAAGTCAAGACCAGCACCCACCACGGGCCCTGCCA...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCAGGGCTTGGCCTTaGCCTGCTGGTCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AREQCLVESCQQLPDPHPGRAWP*PAGLGG
Trigger: GCCTCCAAGACCAGCAGGCCAAGGCCAAGCCCTGCC...TGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCAGCCCATTTTCCAGGTaGGCATCTGCAAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTSPFSR*ASAKLR
Trigger: CCTCAACTTTGCAGATGCCCACCTGGAAAATGGGCT...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACCCTGAAGTTAGCCCCTaGGTGCCACCTGCATCGTGC +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANPEVSP*VPPASC
Trigger: GCACGATGCAGGTGGCACTCAGGGGCTAACTTCAGG...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTTTCCGAAGAAGGGGCTaGCTTCAGGGAAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: LPKKGLPSGKCVHRAACAFRRRG*LQGNAC
Trigger: GCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAA...AGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CCTGGTGCTCAGTGGCCCCTCTTTGCTGGCTGGCTGCCTCTGCTGCCCCATACCAACATTCCATCAGCTTaGAGTGCTGTGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PGAQWPLFAGWLPLLPHTNIPSA*SAVVCE
Trigger: CTCACACACCACAGCACTGCAAGCTGATGGAATGTT...GGTATGGGGCAGCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAGCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCCTAGAGAGCAGTGCTTaGTTGAGTCCTGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPLESSA*LSPANS
Trigger: GCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAG...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACGCGTTGAGCTTGGTCTaGAAGGGGTGGAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANALSLV*KGWRSV
Trigger: GACGCTCCTCCACCCCTTCCAGACCAAGCTCAACGC...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGTGGGAGGTGGCAGGCTaGGGCGGCGTGGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWWEVAG*GGVGRT
Trigger: CGTCCTGCCCACGCCGCCTCAGCCTGCCACCTCCCA...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGCCTACCCTGGATGAGTaGGTGACTGGAGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: AWLSPANSFQILTQARTQPTLDE*VTGELE
Trigger: CTCTAGCTCTCCAGTCACCCACTCATCCAGGGTAGG...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGACAGGCAGAACTGTGTaGTCCCTGAATGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: GRVEGDALHMALLCNDWKTGRTV*SLNVNL
Trigger: CAGGTTCACATTCAGGGATCACACAGTTCTGCCTGT...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCGCTTGCTTTGGGGTCTaGGTTAGCTCCTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LELESSAWLSPANSFQILACFGV*VSSWLH
Trigger: GTGGAGCCAGGAGCTAACTCAGACCCCAAAGCAAGC...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGGTTGTTGGAGCAAAGTaGGTCTCTCACGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: AWLSPANSFQILTQARTQVVGAK*VSHGSR
Trigger: CCGAGATCCGTGAGAGACCCACTTTGCTCCAACAAC...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACGGGACGCCCTGCACATaGCTTTGCTGTGCAATGACT +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANGTPCT*LCCAMT
Trigger: AGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCC...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CAA 72 bp TGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTaGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: WLSALELESSAW*SPANSFQILTQ
Trigger: CTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp CAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTGGGATGCAGTCCGGCTaGGGGCGAGGCTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QNCVIPECEPEVQRTWKAGMQSG*GRGCPQ
Trigger: CTGGGGACAGCCTCGCCCTCAGCCGGACTGCATCCC...AGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGGCACCGTGCAGCCTGTaGTGTGCCCAGGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWAPCSL*CAQGGL
Trigger: GAGGCCTCCCTGGGCACAGCACAGGCTGCACGGTGC...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGGTGTGGACGGGAGGCTaGAGGGCGCTGCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWVWTGG*RALPPV
Trigger: CACAGGAGGCAGCGCCCTGCAGCCTCCCGTCCACAC...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAAGCATGGGTGTCCTGCTaGGCGCTGGGCCCCGCCACT +
Preference number: 4 (lower is better)
Translates to: CVIPECEPEVQRTWKALEAWVSC*ALGPAT
Trigger: AGTGGCGGGGCCCAGCGCCCAGCAGGACACCCATGC...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCGTGGGGCTGGTAGTATaGACTAAGGTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LELESSAWLSPANSFQILVGLVV*TKVLQD
Trigger: GTCCTGCAGCACCTTAGTCCATACTACCAGCCCCAC...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGGCATTGCTGGCAGTGTaGACGGGAGGCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWALLAV*TGGCRA
Trigger: CGCCCTGCAGCCTCCCGTCCACACTGCCAGCAATGC...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCAGTGTCCATCATAACTaGAACATTCCATCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPSVHHN*NIPSAC
Trigger: GCAAGCTGATGGAATGTTCCAGTTATGATGGACACT...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp TCCCACCAGCCGCAGAGAGCCAGGATGGACGTTCCTCGGACGGACGGTTTTCCTAGGAAGTATTCAGGTTaGCTGTGTCAGATGCTAATG +
Preference number: 4 (lower is better)
Translates to: SHQPQRARMDVPRTDGFPRKYSG*LCQMLM
Trigger: CATTAGCATCTGACACAGCCAACCTGAATACTTCCT...AGGAAAACCGTCCGTCCGAGGAACGTCCATCCTGGCTCTCTGCGGCTGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAACCCGGTAGCTGTAGATaGCGGGGCCTGTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: CVIPECEPEVQRTWKALEPGSCR*RGLSRC
Trigger: GCAACGGGACAGGCCCCGGCATCTACAGCTACCGGG...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAACTCCGGCTGCCTCTTTaGGGTGGTGGCCTGACCGTC +
Preference number: 4 (lower is better)
Translates to: CVIPECEPEVQRTWKALELRLPL*GGGLTV
Trigger: GACGGTCAGGCCACCACCGCAAAGAGGCAGCCGGAG...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTCTTGTTTCAAGTTGTTaGAGCAAAGTGGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPKKGLPSGKCVHRAACALVSSC*SKVGLS
Trigger: TGAGAGACCCACTTTGCTCCAACAACTTGAAACAAG...AGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTGAGGATGCCCCAGGCTaGCGGGACTGGGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QNCVIPECEPEVQRTWKAEDAPG*RDWEAE
Trigger: CTCTGCTTCCCAGTCCCGCCAGCCTGGGGCATCCTC...AGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGGAAATGCGTGCACCGTaGAGCCTGTGCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWEMRAP*SLCCAQ
Trigger: CTGGGCACAGCACAGGCTGCACGGTGCACGCATTTC...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACTTTCACTGCTTCTTTTaGGGAGGGTCAGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANFHCFF*GGSDSS
Trigger: TGAGGAATCTGACCCTCCCCAAAAGAAGCAGTGAAA...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTTTGCTGTGCAATGACTaGAAGGCCGCCCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QNCVIPECEPEVQRTWKALLCND*KAARHG
Trigger: CCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAA...AGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
3UTR CAA 72 bp CATAACCCTGACCGCCTGGGGCAGGAAGTATTCAGGTaGGCTGTGTCAGATGCTAATGTGCTGAATCAACAG +
Preference number: 4 (lower is better)
Translates to: HNPDRLGQEVFR*AVSDANVLNQQ
Trigger: CTGTTGATTCAGCACATTAGCATCTGACACAGCCAACCTGAATACTTCCTGCCCCAGGCGGTCAGGGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAGAGCAGTGCTTGGTTaGGTCCTGCCAACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWRAVLG*VLPTAS
Trigger: GGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCT...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAAACTCAGACCACCCCCTaGCTCCTGGGGGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: CVIPECEPEVQRTWKALETQTTP*LLGEMS
Trigger: TGACATTTCCCCCAGGAGGCAGGGGGTGGTCTGAGT...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAATTCCAGGTGGGCATCTaGAAAGTTGAGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: CVIPECEPEVQRTWKALEFQVGI*KVEGAP
Trigger: CGGAGCCCCCTCAACTTTGCAGATGCCCACCTGGAA...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACGAAGTTCAAAGGACTTaGAAAGCTCTGGAATGTGTT +
Preference number: 4 (lower is better)
Translates to: LWLSALELESSAWLSPANEVQRT*KALECV
Trigger: AACACATTCCAGAGCTTTCCAAGTCCTTTGAACTTC...GTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTTGTGTGAGGGTCTGGTaGAGCTCAGCCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: QNCVIPECEPEVQRTWKACVRVW*SSAHFP
Trigger: TGGAAAATGGGCTGAGCTGCACCAGACCCTCACACA...AGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp CAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTAAGTTAGCCCCTGAGTaGCACCTGCATCGTGCCATA +
Preference number: 4 (lower is better)
Translates to: QNCVIPECEPEVQRTWKAKLAPE*HLHRAI
Trigger: TATGGCACGATGCAGGTGGCACTCAGGGGCTAACTT...AGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR GCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAACGGGTAGTGGGATTCTaGATTAGTGGGGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CVIPECEPEVQRTWKALERVVGF*ISGAER
Trigger: TCTCTCAGCCCCACTAATGCAGAATCCCACTACCCG...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CCA 90 bp CAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTATAACCCTGACCGCCTaGGGCAGGAAGTATTCAGGT +
Preference number: 4 (lower is better)
Translates to: QNCVIPECEPEVQRTWKAITLTA*GRKYSG
Trigger: ACCTGAATACTTCCTGCCCCAGGCGGTCAGGGTTAT...AGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGCTAAGGAGGGTAAAGTaGCTTGTTTCAAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWLRRVK*LVSSCW
Trigger: CCAACAACTTGAAACAAGTCACTTTACCCTCCTTAG...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR TCA 90 bp TGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAACAGATGCTAATGTGCTaGATCAACAGTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: CVIPECEPEVQRTWKALEQMLMC*INSHCR
Trigger: TCTGCAATGACTGTTGATTCAGCACATTAGCATCTG...TTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTGAGAGCAGTGCTTGGTaGAGTCCTGCCAACAGCTTC +
Preference number: 5 (lower is better)
Translates to: VLQDLGPGTSCAEAPAASESSAW*SPANSF
Trigger: GAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTC...AGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGATGTTCAGGGCAGGGTaGAGGGGGACGCCCTGCACA +
Preference number: 5 (lower is better)
Translates to: GRVEGDALHMALLCNDWKMFRAG*RGTPCT
Trigger: TGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACAT...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGGCCCCCTGCTTGCTTaGGGGTCTGAGTTAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GRVEGDALHMALLCNDWKGPLLA*GSELAP
Trigger: AGGAGCTAACTCAGACCCCAAAGCAAGCAGGGGGCC...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp AGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGGCTAGAGAGCAGTGCTaGGTTGAGTCCTGCCAACAG +
Preference number: 5 (lower is better)
Translates to: RWVGLVVWTKVLQDLGPGAREQC*VESCQQ
Trigger: CTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGC...CCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCACCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp CTTCCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGCTTTGGAGGCGTTGAGCTaGGTCTGGAAGGGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LPKKGLPSGKCVHRAACALEALS*VWKGWR
Trigger: CCTCCACCCCTTCCAGACCAAGCTCAACGCCTCCAA...AGCACAGGCTGCACGGTGCACGCATTTCCCTGAAGGCAGCCCCTTCTTCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGTGGGCATCTGCAAAGTaGAGGGGGCTCCGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: AWLSPANSFQILTQARTQWASAK*RGLRWV
Trigger: GACCCACCGGAGCCCCCTCAACTTTGCAGATGCCCA...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCGTGCTGGTCTTGACTTaGGTGTCCACTGAGTCCCGA +
Preference number: 5 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPVLVLT*VSTESR
Trigger: TCGGGACTCAGTGGACACCAAAGTCAAGACCAGCAC...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGCTTGGCCTGCTGGTCTaGGAGGCGTTGAGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: AWLSPANSFQILTQARTQLGLLV*EALSLV
Trigger: GACCAAGCTCAACGCCTCCAAGACCAGCAGGCCAAG...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp CTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCCTCAGTGGCCCCTCTTaGCTGGCTGGCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LELESSAWLSPANSFQILLSGPS*LAGCLC
Trigger: GCAGAGGCAGCCAGCCAGCAAAGAGGGGCCACTGAG...GAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGTGGTGGGTGCTGGTCTaGACTTTGGTGTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: AWLSPANSFQILTQARTQWWVLV*TLVSTE
Trigger: CTCAGTGGACACCAAAGTCAAGACCAGCACCCACCA...CTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp TGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCACTTGTTTCAAGTTGTaGGAGCAAAGTGGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: WLCCAMTGRPPGMGSRDPTCFKL*EQSGSL
Trigger: GAGAGACCCACTTTGCTCCAACAACTTGAAACAAGT...GGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp AACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGGCTCCGGCTGCCTCTTaGCGGTGGTGGCCTGACCGT +
Preference number: 5 (lower is better)
Translates to: NRQNCVIPECEPEVQRTWAPAAS*RWWPDR
Trigger: ACGGTCAGGCCACCACCGCAAAGAGGCAGCCGGAGC...CCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGTGACTTGTTTCAAGTaGTTGGAGCAAAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GRVEGDALHMALLCNDWKVTCFK*LEQSGS
Trigger: AGACCCACTTTGCTCCAACAACTTGAAACAAGTCAC...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp GGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGCAGGAAGTATTCAGGTaGGCTGTGTCAGATGCTAAT +
Preference number: 5 (lower is better)
Translates to: GRVEGDALHMALLCNDWKQEVFR*AVSDAN
Trigger: ATTAGCATCTGACACAGCCAACCTGAATACTTCCTG...CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414069.2
CDS-3UTR CAA 90 bp CAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTGCCCTGCACATGGCTTaGCTGTGCAATGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: QNCVIPECEPEVQRTWKAALHMA*LCNDWK
Trigger: CTTCCAGTCATTGCACAGCAAAGCCATGTGCAGGGC...AGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414069.2