RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPRED3 (Homo sapiens)

Ensembl gene IDs: ENSG00000188766

Ensembl transcript IDs: ENST00000338502.8, ENST00000586301.5, ENST00000586958.1, ENST00000587013.5, ENST00000587564.2, ENST00000587947.5, ENST00000590962.1

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGCGGCTGGGAAATTGGGCCTGGGGGCTCCAGGGTCTGAGGTCTaGCTGGCTCCCAGGGCGGCCCTCCATGTACCCCTGATTTGGGGG +
Preference number: 1 (lower is better)
Translates to: QAAGKLGLGAPGSEV*LAPRAALHVPLIWG
Trigger: CCCCCAAATCAGGGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCCCAGGCCCAATTTCCCAGCCGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp CATGGATCAGAGGTGGGTCTCAGCAGGGAGCAGGACTGGGGGACCTaGGAGAGGCGCTGCTGGGAAGTGGCGGCCAGGGGACCTTTCCTT +
Preference number: 1 (lower is better)
Translates to: HGSEVGLSREQDWGT*ERRCWEVAARGPFL
Trigger: AAGGAAAGGTCCCCTGGCCGCCACTTCCCAGCAGCGCCTCTCCCAGGTCCCCCAGTCCTGCTCCCTGCTGAGACCCACCTCTGATCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 90 bp CACTCAAGGGCTGAGGGCCAAGGGCATCAGAGGTCTGGGTCACCATaGGCATCCCCTCTTCTGGGAGCTGGACTCCCAGCCCTTAAGGGG +
Preference number: 1 (lower is better)
Translates to: HSRAEGQGHQRSGSP*ASPLLGAGLPALKG
Trigger: CCCCTTAAGGGCTGGGAGTCCAGCTCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCTCTGATGCCCTTGGCCCTCAGCCCTTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp GGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCCTGAGGTGTTaGTGGCCTTCAGTCGCACATCTGAGGACCCCAGGCACCTCTGAG +
Preference number: 1 (lower is better)
Translates to: GLFENSRPVSRVLRC*WPSVAHLRTPGTSE
Trigger: CTCAGAGGTGCCTGGGGTCCTCAGATGTGCGACTGAAGGCCACCAACACCTCAGGACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp CTATTTGAGAACTCGAGACCAGTATCTCGGGTCCTGAGGTGTTGGTaGCCTTCAGTCGCACATCTGAGGACCCCAGGCACCTCTGAGTCC +
Preference number: 1 (lower is better)
Translates to: LFENSRPVSRVLRCW*PSVAHLRTPGTSES
Trigger: GGACTCAGAGGTGCCTGGGGTCCTCAGATGTGCGACTGAAGGCCACCAACACCTCAGGACCCGAGATACTGGTCTCGAGTTCTCAAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 90 bp TCAGTCGCACATCTGAGGACCCCAGGCACCTCTGAGTCCTATAAATaGTATCCAAAGCTCCTGAGAACCCTGGCTTGGGGGTGGGTGGAC +
Preference number: 1 (lower is better)
Translates to: SVAHLRTPGTSESYK*YPKLLRTLAWGWVD
Trigger: GTCCACCCACCCCCAAGCCAGGGTTCTCAGGAGCTTTGGATATCATTTATAGGACTCAGAGGTGCCTGGGGTCCTCAGATGTGCGACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 90 bp GGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTaGGAACTCGAGACCAGTATCTCGGGTCCTGAGGTGTTGGTGGCC +
Preference number: 1 (lower is better)
Translates to: GLKIQVQEGLQERAI*ELETSISGPEVLVA
Trigger: GGCCACCAACACCTCAGGACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 90 bp GGGGCCAGATGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTaGTCCAAGACCTTGAGGCCCCCATACAGGACACCAGATCTTCGA +
Preference number: 1 (lower is better)
Translates to: GARCRSQAHTTLRLS*SKTLRPPYRTPDLR
Trigger: TCGAAGATCTGGTGTCCTGTATGGGGGCCTCAAGGTCTTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp TCCGAGCACTCAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTaGGAGTTCCCTGGACATCTTAGACTTCAGTGTTCCCGGACTGGA +
Preference number: 1 (lower is better)
Translates to: SEHSVHLKSLGSQGV*EFPGHLRLQCSRTG
Trigger: TCCAGTCCGGGAACACTGAAGTCTAAGATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTGAGTGCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTaGCCAGCAGACTGGTGTGACTTCCAGCTCCTCGAAACCCTGGGC +
Preference number: 1 (lower is better)
Translates to: SLKVSIAHTSSEGTV*PADWCDFQLLETLG
Trigger: GCCCAGGGTTTCGAGGAGCTGGAAGTCACACCAGTCTGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 90 bp GGTCTGAGATCTCTCAATCCAAACTCAAGCTCCAAGTTCCGGATGTaGCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: GLRSLNPNSSSKFRM*LGLGFRSERSPGSW
Trigger: CCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCACATCCGGAACTTGGAGCTTGAGTTTGGATTGAGAGATCTCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp TTCAGTGTTCCCGGACTGGAGGCCAGGTCTGTGGGCACTAAGTCGTaGGTAGATTTGAGGGGCAGCATCTGGAGATTCCAGAGCATAACA +
Preference number: 1 (lower is better)
Translates to: FSVPGLEARSVGTKS*VDLRGSIWRFQSIT
Trigger: TGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAAATCTACCCACGACTTAGTGCCCACAGACCTGGCCTCCAGTCCGGGAACACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp TATCCAAAGCTCCTGAGAACCCTGGCTTGGGGGTGGGTGGACCTATaGAGGTCTTTGATCCCTGGCTTCCAGAGCATCTTGGTGTCTGAT +
Preference number: 1 (lower is better)
Translates to: YPKLLRTLAWGWVDL*RSLIPGFQSILVSD
Trigger: ATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCTCAGGAGCTTTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp TCTGAGGGTGCTGGGGTCTTGGGGCACCTCGAATCTGAACGCCTCTaGTATGGAGGGATGAAGGTCTTGGATCAGGAACAATCCCAATGT +
Preference number: 1 (lower is better)
Translates to: SEGAGVLGHLESERL*YGGMKVLDQEQSQC
Trigger: ACATTGGGATTGTTCCTGATCCAAGACCTTCATCCCTCCATACCAGAGGCGTTCAGATTCGAGGTGCCCCAAGACCCCAGCACCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 90 bp CCTATGGAGGTCTTTGATCCCTGGCTTCCAGAGCATCTTGGTGTCTaGTATCTGGATCTTGGGGGCTCTGGGATGGGTCTCCCAAGTCAT +
Preference number: 1 (lower is better)
Translates to: PMEVFDPWLPEHLGV*YLDLGGSGMGLPSH
Trigger: ATGACTTGGGAGACCCATCCCAGAGCCCCCAAGATCCAGATATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp GAGCATCCCCTCTTCTGGGAGCTGGACTCCCAGCCCTTAAGGGGTTaGGAATCTGTGGGTAGAAAGAAGCTGAAGATTCCAGGACATTTG +
Preference number: 1 (lower is better)
Translates to: EHPLFWELDSQPLRG*ESVGRKKLKIPGHL
Trigger: CAAATGTCCTGGAATCTTCAGCTTCTTTCTACCCACAGATTCCCAACCCCTTAAGGGCTGGGAGTCCAGCTCCCAGAAGAGGGGATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp CAGTGTGGCCAGCAGACTGGTGTGACTTCCAGCTCCTCGAAACCCTaGGCTGTGTGCCTTCACTTAATGAAGACCCTGCATAATCATCTG +
Preference number: 1 (lower is better)
Translates to: QCGQQTGVTSSSSKP*AVCLHLMKTLHNHL
Trigger: CAGATGATTATGCAGGGTCTTCATTAAGTGAAGGCACACAGCCCAGGGTTTCGAGGAGCTGGAAGTCACACCAGTCTGCTGGCCACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 90 bp GATTCCAGGACATTTGGGGTCTCAAAATCCAGGTCCAGGAGGGACTaGAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTC +
Preference number: 1 (lower is better)
Translates to: DSRTFGVSKSRSRRD*KRGLFENSRPVSRV
Trigger: GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATGTCCTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp TCCTGCTGTCTCAGGGGTCCTGGGACTATGAGAATGTCTCAGATGTaGGGGCACCAGGTCTTAGGTGAATATTCAGGAACTGTTTGTGGG +
Preference number: 1 (lower is better)
Translates to: SCCLRGPGTMRMSQM*GHQVLGEYSGTVCG
Trigger: CCCACAAACAGTTCCTGAATATTCACCTAAGACCTGGTGCCCCCACATCTGAGACATTCTCATAGTCCCAGGACCCCTGAGACAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp GCTCGTGTTTCAGTATATCCGAGCACTCAGTGCATCTTAAGAGTCTaGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATCTTAGACTTC +
Preference number: 1 (lower is better)
Translates to: ARVSVYPSTQCILRV*GPRVSGSSLDILDF
Trigger: GAAGTCTAAGATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTGAGTGCTCGGATATACTGAAACACGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 90 bp TTTGGTAAGAGAACAGCTCGTGTTTCAGTATATCCGAGCACTCAGTaGATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGGAGTTCCCTG +
Preference number: 1 (lower is better)
Translates to: FGKRTARVSVYPSTQ*ILRVWGPRVSGSSL
Trigger: CAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTGAGTGCTCGGATATACTGAAACACGAGCTGTTCTCTTACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp AGGTCTTTGATCCCTGGCTTCCAGAGCATCTTGGTGTCTGATATCTaGATCTTGGGGGCTCTGGGATGGGTCTCCCAAGTCATTTTGGTA +
Preference number: 1 (lower is better)
Translates to: RSLIPGFQSILVSDI*ILGALGWVSQVILV
Trigger: TACCAAAATGACTTGGGAGACCCATCCCAGAGCCCCCAAGATCCAGATATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAAAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 90 bp TGGGACTATGAGAATGTCTCAGATGTGGGGGCACCAGGTCTTAGGTaGATATTCAGGAACTGTTTGTGGGTGACTCCAGGTCCTATGGTC +
Preference number: 1 (lower is better)
Translates to: WDYENVSDVGAPGLR*IFRNCLWVTPGPMV
Trigger: GACCATAGGACCTGGAGTCACCCACAAACAGTTCCTGAATATTCACCTAAGACCTGGTGCCCCCACATCTGAGACATTCTCATAGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 90 bp TGGGCTGTGTGCCTTCACTTAATGAAGACCCTGCATAATCATCTGTaGCAATGCTGGGTCCTAGACGTGACAGTGAGGGAGCTCCTACTT +
Preference number: 1 (lower is better)
Translates to: WAVCLHLMKTLHNHL*QCWVLDVTVRELLL
Trigger: AAGTAGGAGCTCCCTCACTGTCACGTCTAGGACCCAGCATTGTCACAGATGATTATGCAGGGTCTTCATTAAGTGAAGGCACACAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp CAGAGCATCTTGGTGTCTGATATCTGGATCTTGGGGGCTCTGGGATaGGTCTCCCAAGTCATTTTGGTAAGAGAACAGCTCGTGTTTCAG +
Preference number: 1 (lower is better)
Translates to: QSILVSDIWILGALG*VSQVILVREQLVFQ
Trigger: CTGAAACACGAGCTGTTCTCTTACCAAAATGACTTGGGAGACCCATCCCAGAGCCCCCAAGATCCAGATATCAGACACCAAGATGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 90 bp TGGGGGCACCAGGTCTTAGGTGAATATTCAGGAACTGTTTGTGGGTaGCTCCAGGTCCTATGGTCTCAAGATCTGATCTGGGAGTTGAAT +
Preference number: 1 (lower is better)
Translates to: WGHQVLGEYSGTVCG*LQVLWSQDLIWELN
Trigger: ATTCAACTCCCAGATCAGATCTTGAGACCATAGGACCTGGAGTCACCCACAAACAGTTCCTGAATATTCACCTAAGACCTGGTGCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 90 bp AATGAAGAAAGGTTAAGTGCACAGTTCCAGATGCTTGGGGCCAGATaGAGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAAG +
Preference number: 1 (lower is better)
Translates to: NEERLSAQFQMLGAR*RSQAHTTLRLSCSK
Trigger: CTTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCAAGCATCTGGAACTGTGCACTTAACCTTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp AGGTCTGTGGGCACTAAGTCGTGGGTAGATTTGAGGGGCAGCATCTaGAGATTCCAGAGCATAACAGAGTTTCAAACTCTGTTTGAAACT +
Preference number: 1 (lower is better)
Translates to: RSVGTKSWVDLRGSI*RFQSITEFQTLFET
Trigger: AGTTTCAAACAGAGTTTGAAACTCTGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAAATCTACCCACGACTTAGTGCCCACAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 90 bp ACCACTTCAGCCTGCACTGACACTAACAATATTGAGGTCACAGACTaGCTTAGAAACAAGATCAGGAAGATATATGTTGGGGTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: TTSACTDTNNIEVTD*LRNKIRKIYVGVPP
Trigger: GGGAGGCACCCCAACATATATCTTCCTGATCTTGTTTCTAAGCCAGTCTGTGACCTCAATATTGTTAGTGTCAGTGCAGGCTGAAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCGAGGCAGGTGGATCATaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPEAGGS*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCATGATCCACCTGCCTC...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCTGTGGGGCTGTAATCTaGGGGACATGGTGCCAGGCG +
Preference number: 2 (lower is better)
Translates to: AARGPFLSPHRFICRSHSCGAVI*GTWCQA
Trigger: CGCCTGGCACCATGTCCCTCAGATTACAGCCCCACA...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp GGGGGCCAAGCATCCGATCTGAGGGGCAAGCGGCTGGGAAATTGGGCCTGGGGGCAAGACTGGGGGCTGTaGGACAGCAGAGCCATAACT +
Preference number: 2 (lower is better)
Translates to: GGQASDLRGKRLGNWAWGQDWGL*DSRAIT
Trigger: AGTTATGGCTCTGCTGTCCCACAGCCCCCAGTCTTG...CCCCCAGGCCCAATTTCCCAGCCGCTTGCCCCTCAGATCGGATGCTTGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAAGGGGGAGGTTGTGGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: WRPGDLSLAPTASSADPTRGRLW*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACCACAACCTCCCCCT...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp GGGGGCCAAGCATCCGATCTGAGGGGCAAGCGGCTGGGAAATTGGGCCTGGGGGCTTGAGCCTTGCATTTaGGGGTCAGTGGCACCTTTG +
Preference number: 2 (lower is better)
Translates to: GGQASDLRGKRLGNWAWGLEPCI*GSVAPL
Trigger: CAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAG...CCCCCAGGCCCAATTTCCCAGCCGCTTGCCCCTCAGATCGGATGCTTGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCCTGAGGTCCGACAAGTaGGGATGGGGGAATCAGGTG +
Preference number: 2 (lower is better)
Translates to: AARGPFLSPHRFICRSHSLRSDK*GWGNQV
Trigger: CACCTGATTCCCCCATCCCCACTTGTCGGACCTCAG...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp GGGGGCCAAGCATCCGATCTGAGGGGCAAGCGGCTGGGAAATTGGGCCTGGGGGAATGTTGTAGGGTCTTaGGCCTTGCATTTGGGGGTC +
Preference number: 2 (lower is better)
Translates to: GGQASDLRGKRLGNWAWGNVVGS*ALHLGV
Trigger: GACCCCCAAATGCAAGGCTCAAGACCCTACAACATT...CCCCCAGGCCCAATTTCCCAGCCGCTTGCCCCTCAGATCGGATGCTTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR GCA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGTGCACAGTTCCAGATaGTTGGGGCCAGATGCAGGT +
Preference number: 2 (lower is better)
Translates to: WRPGDLSLAPTASSADPTVHSSR*LGPDAG
Trigger: ACCTGCATCTGGCCCCAAGCATCTGGAACTGTGCAC...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCCTGGACCCTCAATTTTaGGTCCTCGGGCCGGCTAGG +
Preference number: 2 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFLDPQF*VLGPAR
Trigger: CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAG...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAACCTATGGAGGTCTTTaGTCCCTGGCTTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: WRPGDLSLAPTASSADPTTYGGL*SLASRA
Trigger: TGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGT...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGGTCAGTGGCACCTTTaGGGTATTGGATCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: WRPGDLSLAPTASSADPTGQWHL*GIGSSA
Trigger: AGCACTGGATCCAATACCCCAAAGGTGCCACTGACC...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCCTGAGATGCAAAGTATaGGGACGCCTGGAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFLRCKV*GRLEPP
Trigger: AGGAGGCTCCAGGCGTCCCCATACTTTGCATCTCAG...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp GCTACTCGGGAGGCTGAGGCAGACGAATGGCTTGAACCCGGGAGGGGGAGGTTGGCACCAGGTCTTAGGTaGATATTCAGGAACTGTTTG +
Preference number: 2 (lower is better)
Translates to: ATREAEADEWLEPGRGRLAPGLR*IFRNCL
Trigger: CAAACAGTTCCTGAATATTCACCTAAGACCTGGTGC...CAACCTCCCCCTCCCGGGTTCAAGCCATTCGTCTGCCTCAGCCTCCCGAGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp TGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCCAGAGCATCTaGGTGTCTGATATCTGGATCTTGGGGGCTCTGGGATGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: WVDLWRSLIPGFQSI*VSDIWILGALGWVS
Trigger: GGAGACCCATCCCAGAGCCCCCAAGATCCAGATATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp CTCCTGAGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTaGATCCCTGGCTTCCAGAGCATCTTGGTGTCTGATATCTGGATC +
Preference number: 2 (lower is better)
Translates to: LLRTLAWGWVDLWRS*IPGFQSILVSDIWI
Trigger: GATCCAGATATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp TGGGGCCAGATGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAATGCACACACTTCTTCTaGGGGCACAGTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: WGQMQVPSPYNIETVLLQCTHFF*GHSVAS
Trigger: GCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCA...TTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp CAATGTTGTAGGGTCTTGAGCCTTGCATTTGGGGGTCAGTGGCACCTTTGGGGTCGGGTCCTGAGGTGTTaGTGGCCTTCAGTCGCACAT +
Preference number: 2 (lower is better)
Translates to: QCCRVLSLAFGGQWHLWGRVLRC*WPSVAH
Trigger: ATGTGCGACTGAAGGCCACCAACACCTCAGGACCCG...ACCCCAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAGACCCTACAACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp CCCGGACTGGAGGCCAGGTCTGTGGGCACTAAGTCGTGGGTAGATTaGAGGGGCAGCATCTGGAGATTCCAGAGCATAACAGAGTTTCAA +
Preference number: 2 (lower is better)
Translates to: PGLEARSVGTKSWVD*RGSIWRFQSITEFQ
Trigger: TTGAAACTCTGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAAATCTACCCACGACTTAGTGCCCACAGACCTGGCCTCCAGTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACTCTGGTTGGGAGTGCTaGATCTCACAGGTTCCGGAT +
Preference number: 2 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDSGWEC*ISQVPD
Trigger: ATCCGGAACCTGTGAGATTCAGCACTCCCAACCAGA...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp TCTCTCAATCCAAACTCAAGCTCCAAGTTCCGGATGTGCCTAGGTTaGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: SLNPNSSSKFRMCLG*GFRSERSPGSWTLN
Trigger: ATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCACATCCGGAACTTGGAGCTTGAGTTTGGATTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp AGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAAGACCTaGAGGCCCCCATACAGGACACCAGATCTTCGATCCACTGGAAGC +
Preference number: 2 (lower is better)
Translates to: RSQAHTTLRLSCSKT*RPPYRTPDLRSTGS
Trigger: GCTTCCAGTGGATCGAAGATCTGGTGTCCTGTATGGGGGCCTCAAGGTCTTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR GCA 90 bp GGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGAGAACCTGGCCTTTCTGAGATaGAAAGTATGGGGACGCCTG +
Preference number: 2 (lower is better)
Translates to: GVSKSRSRRDCKRGLFENLAFLR*KVWGRL
Trigger: CAGGCGTCCCCATACTTTGCATCTCAGAAAGGCCAG...GTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp GGTTGGGAATCTGTGGGTAGAAAGAAGCTGAAGATTCCAGGACATTaGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGC +
Preference number: 2 (lower is better)
Translates to: GWESVGRKKLKIPGH*GSQNPGPGGTAREG
Trigger: GCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATGTCCTGGAATCTTCAGCTTCTTTCTACCCACAGATTCCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp GGGCACCTCGAATCTGAACGCCTCTGGTATGGAGGGATGAAGGTCTaGGATCAGGAACAATCCCAATGTTGTAGGGTCTTGAGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: GHLESERLWYGGMKV*DQEQSQCCRVLSLA
Trigger: TGCAAGGCTCAAGACCCTACAACATTGGGATTGTTCCTGATCCAAGACCTTCATCCCTCCATACCAGAGGCGTTCAGATTCGAGGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACTGGGTGGTCCTACAATaGGTTCCAAATGGTAGGGAT +
Preference number: 2 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDWVVLQ*VPNGRD
Trigger: ATCCCTACCATTTGGAACTCATTGTAGGACCACCCA...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR GCA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCAAGGTCCAGGAGGGACTaGAAGAGAGGGCTATTTGAG +
Preference number: 2 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPARSRRD*KRGLFE
Trigger: CTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCT...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp TGGGGCCAGATGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAATTGGTGTCTGATATCTaGATCTTGGGGGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: WGQMQVPSPYNIETVLLQLVSDI*ILGALG
Trigger: TCCCAGAGCCCCCAAGATCCAGATATCAGACACCAA...TTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCAAGCTCCTCGAAACCCTaGGCTGTGTGCCTTCACTTA +
Preference number: 2 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPASSSKP*AVCLHL
Trigger: TAAGTGAAGGCACACAGCCCAGGGTTTCGAGGAGCT...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACCAGGAAGATATATGTTaGGGTGCCTCCCCCAAATCT +
Preference number: 2 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDQEDIC*GASPKS
Trigger: AGATTTGGGGGAGGCACCCCAACATATATCTTCCTG...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp GGGATGAAGGTCTTGGATCAGGAACAATCCCAATGTTGTAGGGTCTaGAGCCTTGCATTTGGGGGTCAGTGGCACCTTTGGGGTATTGGA +
Preference number: 2 (lower is better)
Translates to: GMKVLDQEQSQCCRV*SLAFGGQWHLWGIG
Trigger: TCCAATACCCCAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAGACCCTACAACATTGGGATTGTTCCTGATCCAAGACCTTCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp TTCATCAGACTAGAGAGGTTTGAATCCAAAGAAATCTGGGGTCTGAGGGTGCTGACATGGTGCCAGGCGTaGCCGGGTTCTAGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: FIRLERFESKEIWGLRVLTWCQA*PGSRLF
Trigger: GAACAACCTAGAACCCGGTCACGCCTGGCACCATGT...CAGCACCCTCAGACCCCAGATTTCTTTGGATTCAAACCTCTCTAGTCTGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR TCA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGAGGTCTGGGTCACCATaGGCATCCCCTCTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLRSGSP*ASPLLG
Trigger: TCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCT...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR GCA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACATTTCAACAGGGACCTaGCCTTTTCGGGATCTATGT +
Preference number: 2 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDISTGT*PFRDLC
Trigger: ACATAGATCCCGAAAAGGGCAGGTCCCTGTTGAAAT...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCTCTCAAGATCTGATCTaGGAGTTGAATAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFSQDLI*ELNKGR
Trigger: TCTGCCTTTATTCAACTCCCAGATCAGATCTTGAGA...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp CATTTGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGCTGTCTCAGGGGTCCTaGGACTATGAGAATGTCTCA +
Preference number: 2 (lower is better)
Translates to: HLGSQNPGPGGTAREGYLLSQGS*DYENVS
Trigger: TGAGACATTCTCATAGTCCCAGGACCCCTGAGACAG...CAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp TTGATCCCTGGCTTCCAGAGCATCTTGGTGTCTGATATCTGGATCTaGGGGGCTCTGGGATGGGTCTCCCAAGTCATTTTGGTAAGAGAA +
Preference number: 2 (lower is better)
Translates to: LIPGFQSILVSDIWI*GALGWVSQVILVRE
Trigger: TTCTCTTACCAAAATGACTTGGGAGACCCATCCCAGAGCCCCCAAGATCCAGATATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR GCA 90 bp CATTTGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGTCCAAGTTCCGGATGTaGCTAGGTTTGGGTTTTAGG +
Preference number: 2 (lower is better)
Translates to: HLGSQNPGPGGTAREGYLSKFRM*LGLGFR
Trigger: CCTAAAACCCAAACCTAGGCACATCCGGAACTTGGA...CAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp GATATCTGGATCTTGGGGGCTCTGGGATGGGTCTCCCAAGTCATTTaGGTAAGAGAACAGCTCGTGTTTCAGTATATCCGAGCACTCAGT +
Preference number: 2 (lower is better)
Translates to: DIWILGALGWVSQVI*VREQLVFQYIRALS
Trigger: ACTGAGTGCTCGGATATACTGAAACACGAGCTGTTCTCTTACCAAAATGACTTGGGAGACCCATCCCAGAGCCCCCAAGATCCAGATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 90 bp CCCCATCCTCCCCCACCACTTCAGCCTGCACTGACACTAACAATATaGAGGTCACAGACTGGCTTAGAAACAAGATCAGGAAGATATATG +
Preference number: 2 (lower is better)
Translates to: PHPPPPLQPALTLTI*RSQTGLETRSGRYM
Trigger: CATATATCTTCCTGATCTTGTTTCTAAGCCAGTCTGTGACCTCAATATTGTTAGTGTCAGTGCAGGCTGAAGTGGTGGGGGAGGATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CCA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGGGTTTTAGGGGCCTATaGATGACAGGATTCAAGGGG +
Preference number: 2 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLGFRGL*MTGFKG
Trigger: CCCCTTGAATCCTGTCATCCATAGGCCCCTAAAACC...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp GGGAAATTGGGCCTGGGGGCTCCAGGGTCTGAGGTCTaGCTGGCTCCCAGGGCGGCCCTCCATGTACCCCTG +
Preference number: 3 (lower is better)
Translates to: GKLGLGAPGSEV*LAPRAALHVPL
Trigger: CAGGGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCCCAGGCCCAATTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp GCTGAGGGCCAAGGGCATCAGAGGTCTGGGTCACCATaGGCATCCCCTCTTCTGGGAGCTGGACTCCCAGCC +
Preference number: 3 (lower is better)
Translates to: AEGQGHQRSGSP*ASPLLGAGLPA
Trigger: GGCTGGGAGTCCAGCTCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCTCTGATGCCCTTGGCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCGATCTGATCTGGGAGTaGAATAAAGGCAGAGCCAGT +
Preference number: 3 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPDLIWE*NKGRAS
Trigger: ACTGGCTCTGCCTTTATTCAACTCCCAGATCAGATC...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp GCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTaGAGATCCCACAGCACCGTACAGCACTCTGGTCCC +
Preference number: 3 (lower is better)
Translates to: ARGPFLSPHRFI*RSHSTVQHSGP
Trigger: GGGACCAGAGTGCTGTACGGTGCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGACCTATGGAGGTCTTaGATCCCTGGCTTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: WRPGDLSLAPTASSADPTDLWRS*IPGFQS
Trigger: GCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGTC...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp AACTCGAGACCAGTATCTCGGGTCCTGAGGTGTTGGTaGCCTTCAGTCGCACATCTGAGGACCCCAGGCACC +
Preference number: 3 (lower is better)
Translates to: NSRPVSRVLRCW*PSVAHLRTPGT
Trigger: GGTGCCTGGGGTCCTCAGATGTGCGACTGAAGGCCACCAACACCTCAGGACCCGAGATACTGGTCTCGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp GAGAACTCGAGACCAGTATCTCGGGTCCTGAGGTGTTaGTGGCCTTCAGTCGCACATCTGAGGACCCCAGGC +
Preference number: 3 (lower is better)
Translates to: ENSRPVSRVLRC*WPSVAHLRTPG
Trigger: GCCTGGGGTCCTCAGATGTGCGACTGAAGGCCACCAACACCTCAGGACCCGAGATACTGGTCTCGAGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCGTCTCCCAAGTCATTTaGGTAAGAGAACAGCTCGTG +
Preference number: 3 (lower is better)
Translates to: AARGPFLSPHRFICRSHSVSQVI*VREQLV
Trigger: CACGAGCTGTTCTCTTACCAAAATGACTTGGGAGAC...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp CTCCTGAGAACCCTGGCTTGGGGGTGGGTGGACCTATaGAGGTCTTTGATCCCTGGCTTCCAGAGCATCTTG +
Preference number: 3 (lower is better)
Translates to: LLRTLAWGWVDL*RSLIPGFQSIL
Trigger: CAAGATGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp TGCCCTTTTCGGGATCTATGTGCTCCCTGGCCTTTCTaGGATGCAAAGTATGGGGACGCCTGGAGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: CPFRDLCAPWPF*DAKYGDAWSLL
Trigger: GAGGAGGCTCCAGGCGTCCCCATACTTTGCATCTCAGAAAGGCCAGGGAGCACATAGATCCCGAAAAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp TTTTCGGGATCTATGTGCTCCCTGGCCTTTCTGAGATaGAAAGTATGGGGACGCCTGGAGCCTCCTCGTGGG +
Preference number: 3 (lower is better)
Translates to: FSGSMCSLAFLR*KVWGRLEPPRG
Trigger: CCCACGAGGAGGCTCCAGGCGTCCCCATACTTTGCATCTCAGAAAGGCCAGGGAGCACATAGATCCCGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp TCCAAAGAAATCTGGGGTCTGAGGGTGCTGGGGTCTTaGGGCACCTCGAATCTGAACGCCTCTGGTATGGAG +
Preference number: 3 (lower is better)
Translates to: SKEIWGLRVLGS*GTSNLNASGME
Trigger: CTCCATACCAGAGGCGTTCAGATTCGAGGTGCCCCAAGACCCCAGCACCCTCAGACCCCAGATTTCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp ATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTaGGAACTCGAGACCAGTATCTCGGGTCCTGAGGTG +
Preference number: 3 (lower is better)
Translates to: IQVQEGLQERAI*ELETSISGPEV
Trigger: CACCTCAGGACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp ATCCCTGGCTTCCAGAGCATCTTGGTGTCTGATATCTaGATCTTGGGGGCTCTGGGATGGGTCTCCCAAGTC +
Preference number: 3 (lower is better)
Translates to: IPGFQSILVSDI*ILGALGWVSQV
Trigger: GACTTGGGAGACCCATCCCAGAGCCCCCAAGATCCAGATATCAGACACCAAGATGCTCTGGAAGCCAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp GCTGGGGTCTTGGGGCACCTCGAATCTGAACGCCTCTaGTATGGAGGGATGAAGGTCTTGGATCAGGAACAA +
Preference number: 3 (lower is better)
Translates to: AGVLGHLESERL*YGGMKVLDQEQ
Trigger: TTGTTCCTGATCCAAGACCTTCATCCCTCCATACCAGAGGCGTTCAGATTCGAGGTGCCCCAAGACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp GTCTTTGATCCCTGGCTTCCAGAGCATCTTGGTGTCTaGTATCTGGATCTTGGGGGCTCTGGGATGGGTCTC +
Preference number: 3 (lower is better)
Translates to: VFDPWLPEHLGV*YLDLGGSGMGL
Trigger: GAGACCCATCCCAGAGCCCCCAAGATCCAGATATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp CATCTGAGGACCCCAGGCACCTCTGAGTCCTATAAATaGTATCCAAAGCTCCTGAGAACCCTGGCTTGGGGG +
Preference number: 3 (lower is better)
Translates to: HLRTPGTSESYK*YPKLLRTLAWG
Trigger: CCCCCAAGCCAGGGTTCTCAGGAGCTTTGGATATCATTTATAGGACTCAGAGGTGCCTGGGGTCCTCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp TGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTaGTCCAAGACCTTGAGGCCCCCATACAGGACACCA +
Preference number: 3 (lower is better)
Translates to: CRSQAHTTLRLS*SKTLRPPYRTP
Trigger: TGGTGTCCTGTATGGGGGCCTCAAGGTCTTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp TCAGTATATCCGAGCACTCAGTGCATCTTAAGAGTCTaGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATC +
Preference number: 3 (lower is better)
Translates to: SVYPSTQCILRV*GPRVSGSSLDI
Trigger: GATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTGAGTGCTCGGATATACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp CAGCAGACTGGTGTGACTTCCAGCTCCTCGAAACCCTaGGCTGTGTGCCTTCACTTAATGAAGACCCTGCAT +
Preference number: 3 (lower is better)
Translates to: QQTGVTSSSSKP*AVCLHLMKTLH
Trigger: ATGCAGGGTCTTCATTAAGTGAAGGCACACAGCCCAGGGTTTCGAGGAGCTGGAAGTCACACCAGTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp GTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTaGCCAGCAGACTGGTGTGACTTCCAGCTCCTCGAA +
Preference number: 3 (lower is better)
Translates to: VSIAHTSSEGTV*PADWCDFQLLE
Trigger: TTCGAGGAGCTGGAAGTCACACCAGTCTGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp CATTTGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGCGGATGTGCCTAGGTTaGGGTTTTAGGTCCGAACGG +
Preference number: 3 (lower is better)
Translates to: HLGSQNPGPGGTAREGYLRMCLG*GFRSER
Trigger: CCGTTCGGACCTAAAACCCAAACCTAGGCACATCCG...CAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp GCACCTCTGAGTCCTATAAATGATATCCAAAGCTCCTaGGAACCCTGGCTTGGGGGTGGGTGGACCTATGGA +
Preference number: 3 (lower is better)
Translates to: APLSPINDIQSS*EPWLGGGWTYG
Trigger: TCCATAGGTCCACCCACCCCCAAGCCAGGGTTCTCAGGAGCTTTGGATATCATTTATAGGACTCAGAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp AGAACAGCTCGTGTTTCAGTATATCCGAGCACTCAGTaGATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: RTARVSVYPSTQ*ILRVWGPRVSG
Trigger: CCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTGAGTGCTCGGATATACTGAAACACGAGCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp TCAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTaGGAGTTCCCTGGACATCTTAGACTTCAGTGTTCC +
Preference number: 3 (lower is better)
Translates to: SVHLKSLGSQGV*EFPGHLRLQCS
Trigger: GGAACACTGAAGTCTAAGATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCAAAGTCGTGGGTAGATTaGAGGGGCAGCATCTGGAGA +
Preference number: 3 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPAKSWVD*RGSIWR
Trigger: TCTCCAGATGCTGCCCCTCAAATCTACCCACGACTT...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCACAATGTTGTAGGGTCTaGAGCCTTGCATTTGGGGGT +
Preference number: 3 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPAQCCRV*SLAFGG
Trigger: ACCCCCAAATGCAAGGCTCAAGACCCTACAACATTG...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp TCTTGGATCAGGAACAATCCCAATGTTGTAGGGTCTTaGGCCTTGCATTTGGGGGTCAGTGGCACCTTTGGG +
Preference number: 3 (lower is better)
Translates to: SWIRNNPNVVGS*ALHLGVSGTFG
Trigger: CCCAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAGACCCTACAACATTGGGATTGTTCCTGATCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp TCTCTCAATCCAAACTCAAGCTCCAAGTTCCGGATGTaGCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCG +
Preference number: 3 (lower is better)
Translates to: SLNPNSSSKFRM*LGLGFRSERSP
Trigger: CGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCACATCCGGAACTTGGAGCTTGAGTTTGGATTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp CATTTCAACAGGGACCTGCCCTTTTCGGGATCTATGTaGTCCCTGGCCTTTCTGAGATGCAAAGTATGGGGA +
Preference number: 3 (lower is better)
Translates to: HFNRDLPFSGSM*SLAFLRCKVWG
Trigger: TCCCCATACTTTGCATCTCAGAAAGGCCAGGGAGCACATAGATCCCGAAAAGGGCAGGTCCCTGTTGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp GGTGTGACTTCCAGCTCCTCGAAACCCTGGGCTGTGTaGCTTCACTTAATGAAGACCCTGCATAATCATCTG +
Preference number: 3 (lower is better)
Translates to: GVTSSSSKPWAV*LHLMKTLHNHL
Trigger: CAGATGATTATGCAGGGTCTTCATTAAGTGAAGGCACACAGCCCAGGGTTTCGAGGAGCTGGAAGTCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR GCA 72 bp AGGTTAAGTGCACAGTTCCAGATGCTTGGGGCCAGATaGAGGTCCCAAGCCCATACAACATTGAGACTGTCT +
Preference number: 3 (lower is better)
Translates to: RLSAQFQMLGAR*RSQAHTTLRLS
Trigger: AGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCAAGCATCTGGAACTGTGCACTTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp CTCAGGGGTCCTGGGACTATGAGAATGTCTCAGATGTaGGGGCACCAGGTCTTAGGTGAATATTCAGGAACT +
Preference number: 3 (lower is better)
Translates to: LRGPGTMRMSQM*GHQVLGEYSGT
Trigger: AGTTCCTGAATATTCACCTAAGACCTGGTGCCCCCACATCTGAGACATTCTCATAGTCCCAGGACCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp TGTTGTAGGGTCTTGAGCCTTGCATTTGGGGGTCAGTaGCACCTTTGGGGTATTGGATCCAGTGCTCCTAAA +
Preference number: 3 (lower is better)
Translates to: CCRVLSLAFGGQ*HLWGIGSSAPK
Trigger: TTTAGGAGCACTGGATCCAATACCCCAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAGACCCTACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGCTCTCAGTCCTAGGTTaGGGTTCCAGGTTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLLSVLG*GSRFQV
Trigger: GACCTGGAACCTGGAACCCAAACCTAGGACTGAGAG...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACAGTTTCAAACTCTGTTaGAAACTTTCTCAGGGGTCC +
Preference number: 3 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDSFKLC*KLSQGS
Trigger: GGACCCCTGAGAAAGTTTCAAACAGAGTTTGAAACT...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGTCTGATATCTGGATCTaGGGGGCTCTGGGATGGGTC +
Preference number: 3 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLSDIWI*GALGWV
Trigger: GACCCATCCCAGAGCCCCCAAGATCCAGATATCAGA...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR-3UTR CAA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCAGCAAGAGAGGGCTATTaGAGAACTCGAGACCAGTAT +
Preference number: 3 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPAAREGY*RTRDQY
Trigger: ATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGC...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp GAGAATGTCTCAGATGTGGGGGCACCAGGTCTTAGGTaGATATTCAGGAACTGTTTGTGGGTGACTCCAGGT +
Preference number: 3 (lower is better)
Translates to: ENVSDVGAPGLR*IFRNCLWVTPG
Trigger: ACCTGGAGTCACCCACAAACAGTTCCTGAATATTCACCTAAGACCTGGTGCCCCCACATCTGAGACATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp GGCACCTCGAATCTGAACGCCTCTGGTATGGAGGGATaGAGGTCTTGGATCAGGAACAATCCCAATGTTGTA +
Preference number: 3 (lower is better)
Translates to: GTSNLNASGMEG*RSWIRNNPNVV
Trigger: TACAACATTGGGATTGTTCCTGATCCAAGACCTTCATCCCTCCATACCAGAGGCGTTCAGATTCGAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp TGCCTTCACTTAATGAAGACCCTGCATAATCATCTGTaGCAATGCTGGGTCCTAGACGTGACAGTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: CLHLMKTLHNHL*QCWVLDVTVRE
Trigger: CTCCCTCACTGTCACGTCTAGGACCCAGCATTGTCACAGATGATTATGCAGGGTCTTCATTAAGTGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CCA 72 bp GGCACTAAGTCGTGGGTAGATTTGAGGGGCAGCATCTaGAGATTCCAGAGCATAACAGAGTTTCAAACTCTG +
Preference number: 3 (lower is better)
Translates to: GTKSWVDLRGSI*RFQSITEFQTL
Trigger: CAGAGTTTGAAACTCTGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAAATCTACCCACGACTTAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR TCA 72 bp CAGGTCTTAGGTGAATATTCAGGAACTGTTTGTGGGTaGCTCCAGGTCCTATGGTCTCAAGATCTGATCTGG +
Preference number: 3 (lower is better)
Translates to: QVLGEYSGTVCG*LQVLWSQDLIW
Trigger: CCAGATCAGATCTTGAGACCATAGGACCTGGAGTCACCCACAAACAGTTCCTGAATATTCACCTAAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCATGCACGCAGCGCGCTaGCTCCTCCGCTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPMHAAR*LLRFRG
Trigger: TCCCCGGAAGCGGAGGAGGCAGCGCGCTGCGTGCAT...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGAGCGCACGACGCAGGTaGACAGGGCGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARSARRR*TGRGAR
Trigger: CCGCGCCCCTCGCCCTGTCCACCTGCGTCGTGCGCT...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp GGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCAAGAGCGCGCGGCAATaGACGCAGCGCGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPNGVRGPGPSILGPRAGKSARQ*TQRAAS
Trigger: GGAGGCAGCGCGCTGCGTGCATTGCCGCGCGCTCTT...GCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGCAGAGGCAGGGCACTaGCAGGGAGAGCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGAEAGH*QGERGQ
Trigger: CTGGCCGCGCTCTCCCTGGCAGTGCCCTGCCTCTGC...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGCAGCCGCATCGCGCTaGGACCCAGTGGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLAAASR*DPVARA
Trigger: CGCGCGTGCCACTGGGTCGCAGCGCGATGCGGCTGC...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGTTCGTTCCGGCTCCCTaGCTGGCTCCGGCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGFVPAP*LAPAAL
Trigger: CAGCGCCGCCGGAGCCAGCCAGGGAGCCGGAACGAA...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS-3UTR GCA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGCCGCCACGCCCGTCTaGTCTGCGACGGAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLAATPV*SATEER
Trigger: GCGCTCTTCCGTCGCAGAGCAGACGGGCGTGGCGGC...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp GCTACTCGGGAGGCTGAGGCAGACGAATGGCTTGAACCCGGGAGGGGGAGGTTGGCAGAGGCAGGGCACTaGCAGGGAGAGCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ATREAEADEWLEPGRGRLAEAGH*QGERGQ
Trigger: CTGGCCGCGCTCTCCCTGGCAGTGCCCTGCCTCTGC...CAACCTCCCCCTCCCGGGTTCAAGCCATTCGTCTGCCTCAGCCTCCCGAGTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCAGCCGCATCGCGCTaGGACCCAGTGGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: WRPGDLSLAPTASSADPTAAASR*DPVARA
Trigger: CGCGCGTGCCACTGGGTCGCAGCGCGATGCGGCTGC...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGCTTCCGGGGAGGCCTTaGCAGGCGCAGAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARLPGRP*QAQRMG
Trigger: GCCCATCCTCTGCGCCTGCCAAGGCCTCCCCGGAAG...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR TCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGTCTCCTGGCGGCTGTaGCTGGAGGAGGAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARVSWRL*LEEESL
Trigger: CAGCGACTCCTCCTCCAGTCACAGCCGCCAGGAGAC...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCGCCAGCAGACTGGTGTaGCTTCCAGCTCCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPASRLV*LPAPRN
Trigger: GTTTCGAGGAGCTGGAAGTCACACCAGTCTGCTGGC...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGTGCCCCCTCCCCCGATaGCAAGGCTGGGTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGCPLPR*QGWVFG
Trigger: GCCAAAGACCCAGCCTTGTCATCGGGGGAGGGGGCA...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCCACGCCCGTCTGCTCTaGGACGGAAGAGCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LGPNGVRGPGPSILGPRAHARLL*DGRARG
Trigger: GCCGCGCGCTCTTCCGTCGCAGAGCAGACGGGCGTG...GGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp TCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGTGCGGGCTTACTTGCCTaGTGGGTCCTAGAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SWTLNFGSSGRLGDPPGRAGLLA*WVLEPG
Trigger: GCCGGGCTCTAGGACCCAGCAGGCAAGTAAGCCCGC...ACGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS-3UTR CCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGTCAACGCGCCGGTCTTaGCGAAGCGCACGACGCAGG +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGSTRRS*RSARRR
Trigger: CCTGCGTCGTGCGCTTCGCCAAGACCGGCGCGTTGA...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCGGGTCCCAGGGTGTCTaGGAGTTCCCTGGACATCTT +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPGSQGV*EFPGHL
Trigger: AAGATGTCCAGGGAACTCCCAGACACCCTGGGACCC...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGTCCCTGGGAAATTGGGCCTaGGGGCTCCAGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LDPQFWVLGPARGPTRPSLGNWA*GLQGLR
Trigger: CCTCAGACCCTGGAGCCCCCAGGCCCAATTTCCCAG...GGACGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GGCATCAGAGGTCTGGGTCACCATGAGCATCCCCTCTTCTGGGAGCTGGACTCCGGCGTTCCCCGTGGATaGCGTAGTGCCCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GIRGLGHHEHPLFWELDSGVPRG*RSAPGG
Trigger: CCCGCCAGGGGCACTACGTCATCCACGGGGAACGCC...GGAGTCCAGCTCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCTCTGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCGTTCCGGAATCCCCGTaGACGGTAGAAGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GPNGVRGPGPSILGPRAGVPESP*TVEAEG
Trigger: ACCCTCCGCTTCTACCGTTCACGGGGATTCCGGAAC...GCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCTTAGGGGCCTATGGATaGCAGGATTCAAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPLGAYG*QDSRGS
Trigger: GCTGCCCCTTGAATCCTGTCATCCATAGGCCCCTAA...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCACGCCCGTCTGCTCTaGGACGGAAGAGCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGHARLL*DGRARG
Trigger: GCCGCGCGCTCTTCCGTCGCAGAGCAGACGGGCGTG...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCGCCGCCACGCCCGTCTaGTCTGCGACGGAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGAATPV*SATEER
Trigger: GCGCTCTTCCGTCGCAGAGCAGACGGGCGTGGCGGC...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGCGAGGCGGGCTTACTTaGCTGCTGGGTCCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGRGGLT*LLGPRA
Trigger: GGCTCTAGGACCCAGCAGGCAAGTAAGCCCGCCTCG...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS-3UTR CCA 90 bp GGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCCGGAGTCCGGGGTCCTaGACCCTCAATTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GPNGVRGPGPSILGPRAGRSPGS*TLNFGS
Trigger: GGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCG...GCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCCAGAGGCTGGAACCTTaGGGTTTTAGGGGCCTATGG +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPQRLEP*GFRGLW
Trigger: CCATAGGCCCCTAAAACCCCAAGGTTCCAGCCTCTG...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGTGTGGGGCTGTAATCTaGGGGACATGGTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGCGAVI*GTWCQA
Trigger: CGCCTGGCACCATGTCCCTCAGATTACAGCCCCACA...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGGGCACCTCGAATCTaGACGCCTCTGGTATGGAGG +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARGAPRI*TPLVWR
Trigger: CCTCCATACCAGAGGCGTTCAGATTCGAGGTGCCCC...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCTTCCGGGGAGGCCTTaGCAGGCGCAGAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGLPGRP*QAQRMG
Trigger: GCCCATCCTCTGCGCCTGCCAAGGCCTCCCCGGAAG...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCGTGTGGCCAGCAGACTaGTGTGACTTCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGVWPAD*CDFQLL
Trigger: GAGGAGCTGGAAGTCACACCAGTCTGCTGGCCACAC...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCGGCGCTGCTGGGAAGTaGCGGCCAGGGGACCTTTCC +
Preference number: 4 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGGAAGK*RPGDLS
Trigger: GGAAAGGTCCCCTGGCCGCCACTTCCCAGCAGCGCC...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp TCCCAGCTACTCGGGAGGCTGAGGCAGACGAATGGCTaGAACCCGGGAGGGGGAGGTTGTGGTGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SQLLGRLRQTNG*NPGGGGCGEPR
Trigger: TCTCGGCTCACCACAACCTCCCCCTCCCGGGTTCAAGCCATTCGTCTGCCTCAGCCTCCCGAGTAGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp CTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGTCCGGGACAACACAGTCATaGGCTCAAACCCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LDPQFWVLGPARGPTRPSGTTQS*AQTLLS
Trigger: GGAGAGCAGGGTTTGAGCTCATGACTGTGTTGTCCC...GGACGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGACATGGTGCCAGGCGTaGCCGGGTTCTAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGTWCQA*PGSRLF
Trigger: GAACAACCTAGAACCCGGTCACGCCTGGCACCATGT...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCAATGTTGTAGGGTCTTaGGCCTTGCATTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPNVVGS*ALHLGV
Trigger: GACCCCCAAATGCAAGGCTCAAGACCCTACAACATT...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGTGCACACACTTCTTCTaGGGGCACAGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGCTHFF*GHSVAS
Trigger: GCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCA...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCATGCTTGGGGCCAGATaGAGGTCCCAAGCCCATACA +
Preference number: 4 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGMLGAR*RSQAHT
Trigger: TGTATGGGCTTGGGACCTGCATCTGGCCCCAAGCAT...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCTGAGATGCAAAGTATaGGGACGCCTGGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGLRCKV*GRLEPP
Trigger: AGGAGGCTCCAGGCGTCCCCATACTTTGCATCTCAG...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGTGCATCTTAAGAGTCTaGGGTCCCAGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLDPQFWVLGPARGPTRPCILRV*GPRVSG
Trigger: CCCAGACACCCTGGGACCCCAGACTCTTAAGATGCA...CGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTGATATCCAAAGCTCCTaGGAACCCTGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VRTESGVLDPQFWVLGPADIQSS*EPWLGG
Trigger: ACCCCCAAGCCAGGGTTCTCAGGAGCTTTGGATATC...AGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGAGAGGACCTATCCCTTaGACCCCAACAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGRGPIP*TPTRPS
Trigger: GGATGGCCTTGTTGGGGTTCAAGGGATAGGTCCTCT...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGTCTGGTTGGGAGTGCTaGATCTCACAGGTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: VLDPQFWVLGPARGPTRPSGWEC*ISQVPD
Trigger: ATCCGGAACCTGTGAGATTCAGCACTCCCAACCAGA...CGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TGCCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATAAGAGCGCGCGGCAATaGACGCAGCGCGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLGLGFRSERSPGSWTLNKSARQ*TQRAAS
Trigger: GGAGGCAGCGCGCTGCGTGCATTGCCGCGCGCTCTT...ATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCTATCCGAGCACTCAGTaGATCTTAAGAGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPYPSTQ*ILRVWG
Trigger: ACCCCAGACTCTTAAGATGCACTGAGTGCTCGGATA...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp CAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATCCATGGGGACCCAGGCTaGCCCAGCCCCCAATCCCTC +
Preference number: 4 (lower is better)
Translates to: QCILRVWGPRVSGSSLDIHGDPG*PSPQSL
Trigger: GAGGGATTGGGGGCTGGGGCAGCCTGGGTCCCCATG...GATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCCTGGACCCTCAATTTTaGGTCCTCGGGCCGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LGPNGVRGPGPSILGPRALDPQF*VLGPAR
Trigger: CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAG...GGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCTGATATCTGGATCTTaGGGGCTCTGGGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGLISGS*GLWDGS
Trigger: AGACCCATCCCAGAGCCCCCAAGATCCAGATATCAG...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGTTGGGCTGGGATCCTTaGGACCAGAATTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RSERSPGSWTLNFGSSGRLGWDP*DQNSRG
Trigger: GCCTCTGGAATTCTGGTCCCAAGGATCCCAGCCCAA...CCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GGGGCTCCAGGGTCTGAGGTCTGCCTGGCTCCCAGGGCGGCCCTCCATGTACCCAATGAAGGGGAATCATaGATCAGAGGTGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GAPGSEVCLAPRAALHVPNEGES*IRGGSQ
Trigger: CTGAGACCCACCTCTGATCCATGATTCCCCTTCATT...GGGTACATGGAGGGCCGCCCTGGGAGCCAGGCAGACCTCAGACCCTGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTACCTATGGAGGTCTTTaGTCCCTGGCTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VRTESGVLDPQFWVLGPATYGGL*SLASRA
Trigger: TGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGT...AGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGAGGCAGGTGGATCATaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLEAGGS*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCATGATCCACCTGCCTC...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp AGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGACGTCAGTCCAAACTTaGAGTCACCCAGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RSERSPGSWTLNFGSSGRTSVQT*SHPGSS
Trigger: ACTGGAGCCTGGGTGACTGCAAGTTTGGACTGACGT...CCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGAACTCATCAGCCTCTaGAGGGCTCTGAAACGTCAG +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARELISL*RALKRQ
Trigger: CTGACGTTTCAGAGCCCTGCAGAGGCTGATGAGTTC...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp GTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGACATTGAGACTGTCTTaGTCCAAGACCTTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VLDPQFWVLGPARGPTRPTLRLS*SKTLRP
Trigger: GGGCCTCAAGGTCTTGGAGCAAGACAGTCTCAATGT...CGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACACCCCACCGCTTCATCTaGAGATCCCACAGCACCGTA +
Preference number: 4 (lower is better)
Translates to: WRPGDLSLAPTASSADPTPHRFI*RSHSTV
Trigger: TACGGTGCTGTGGGATCTGCAGATGAAGCGGTGGGG...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCTGGACCCTCAATTTTaGGTCCTCGGGCCGGCTAGG +
Preference number: 4 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGLDPQF*VLGPAR
Trigger: CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAG...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GGGGGCCAAGCATCCGATCTGAGGGGCAAGCGGCTGGGAAATTGGGCCTGGGGGGAATCTGAACGCCTCTaGTATGGAGGGATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GGQASDLRGKRLGNWAWGESERL*YGGMKV
Trigger: GACCTTCATCCCTCCATACCAGAGGCGTTCAGATTC...CCCCCAGGCCCAATTTCCCAGCCGCTTGCCCCTCAGATCGGATGCTTGGCCCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCGTGCCCCACCCTGGGTaGTCCTACAATGAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: AARGPFLSPHRFICRSHSVPHPG*SYNEFQ
Trigger: TTGGAACTCATTGTAGGACCACCCAGGGTGGGGCAC...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATCACCGTACAGCACTCTaGTCCCCCGTCCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNHRTAL*SPVPPL
Trigger: GAGGGGTGGGACGGGGGACCAGAGTGCTGTACGGTG...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGCAGGGACAGGGACTaGTCTCAAGGTTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARGRDRD*SQGSKE
Trigger: CTCTTTAGAACCTTGAGACCAGTCCCTGTCCCTGCC...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS-3UTR CCA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCGGCTTACTTGCCTGCTaGGTCCTAGAGCCCGGCACT +
Preference number: 4 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGGLLAC*VLEPGT
Trigger: AGTGCCGGGCTCTAGGACCCAGCAGGCAAGTAAGCC...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS-3UTR TCA 90 bp GGCATCAGAGGTCTGGGTCACCATGAGCATCCCCTCTTCTGGGAGCTGGACTCCCTTGCTCCAAGACCTTaGGGCCCCCATACAGGACAC +
Preference number: 4 (lower is better)
Translates to: GIRGLGHHEHPLFWELDSLAPRP*GPHTGH
Trigger: GTGTCCTGTATGGGGGCCTCAAGGTCTTGGAGCAAG...GGAGTCCAGCTCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCTCTGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGCATGAGCTCAAACCCTaGTCTCCCATGGAATGTTCC +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARHELKP*SPMECS
Trigger: GGAACATTCCATGGGAGAGCAGGGTTTGAGCTCATG...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCACGTCAGTCCAAACTTaGAGTCACCCAGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AARGPFLSPHRFICRSHSTSVQT*SHPGSS
Trigger: ACTGGAGCCTGGGTGACTGCAAGTTTGGACTGACGT...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp CTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTATGCACGCAGCGCGCTaGCTCCTCCGCTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LGLGFRSERSPGSWTLNFMHAAR*LLRFRG
Trigger: TCCCCGGAAGCGGAGGAGGCAGCGCGCTGCGTGCAT...AAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR GCA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCTCCAAGTTCCGGATGTaGCTAGGTTTGGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGSKFRM*LGLGFR
Trigger: CCTAAAACCCAAACCTAGGCACATCCGGAACTTGGA...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCACCTGGGAGAGGCGCTaGTGGGAAGTGGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVTWERR*WEVAAR
Trigger: CCTGGCCGCCACTTCCCAGCAGCGCCTCTCCCAGGT...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATCCTGGCGGCTGTGACTaGAGGAGGAGTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNPGGCD*RRSRCP
Trigger: TGGACAGCGACTCCTCCTCCAGTCACAGCCGCCAGG...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCTTGAGGGGCAGCATCTaGAGATTCCAGAGCATAACA +
Preference number: 4 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGLRGSI*RFQSIT
Trigger: TGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAA...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTACTTGAGCCTTGCATTTaGGGGTCAGTGGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLLEPCI*GSVAPL
Trigger: CAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAG...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAAGCTCCTCGAAACCCTaGGCTGTGTGCCTTCACTTA +
Preference number: 4 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLSSSKP*AVCLHL
Trigger: TAAGTGAAGGCACACAGCCCAGGGTTTCGAGGAGCT...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAACCCATCCCAGGGTCTaGTTGGGAGTGCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: WRPGDLSLAPTASSADPTTHPRV*LGVLNL
Trigger: GAGATTCAGCACTCCCAACCAGACCCTGGGATGGGT...TGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CAATGTTGTAGGGTCTTGAGCCTTGCATTTGGGGGTCAGTGGCACCTTTGGGGTTGGGAGAGGCGCTGCTaGGAAGTGGCGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QCCRVLSLAFGGQWHLWGWERRC*EVAARG
Trigger: TCCCCTGGCCGCCACTTCCCAGCAGCGCCTCTCCCA...ACCCCAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAGACCCTACAACATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp AGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGTGGGTGGTCCTACAATaGGTTCCAAATGGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: RSERSPGSWTLNFGSSGRWVVLQ*VPNGRD
Trigger: ATCCCTACCATTTGGAACTCATTGTAGGACCACCCA...CCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TGCCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATAGGGGGAGGTTGTGGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLGLGFRSERSPGSWTLNRGRLW*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACCACAACCTCCCCCT...ATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCGTTGTAAACCAAGCCTaGCTTCAGTGTACACTCCAA +
Preference number: 4 (lower is better)
Translates to: GPNGVRGPGPSILGPRAGVVNQA*LQCTLQ
Trigger: TTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAAC...GCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GGAATCAGGTGTAGAGGCAACTTGGGGTTCATCAGACTAGAGAGGTTTGAATCCAGCGCACGACGCAGGTaGACAGGGCGAGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GIRCRGNLGFIRLERFESSARRR*TGRGAR
Trigger: CCGCGCCCCTCGCCCTGTCCACCTGCGTCGTGCGCT...GGATTCAAACCTCTCTAGTCTGATGAACCCCAAGTTGCCTCTACACCTGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CAATGTTGTAGGGTCTTGAGCCTTGCATTTGGGGGTCAGTGGCACCTTTGGGGTTCAACGCGCCGGTCTTaGCGAAGCGCACGACGCAGG +
Preference number: 4 (lower is better)
Translates to: QCCRVLSLAFGGQWHLWGSTRRS*RSARRR
Trigger: CCTGCGTCGTGCGCTTCGCCAAGACCGGCGCGTTGA...ACCCCAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAGACCCTACAACATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATCGGAGTCCGGGGTCCTaGACCCTCAATTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNRSPGS*TLNFGS
Trigger: GGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCG...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATCAAGTATGGGGACGCCTaGAGCCTCCTCGTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QCILRVWGPRVSGSSLDIKYGDA*SLLVGC
Trigger: ACACCCCACGAGGAGGCTCCAGGCGTCCCCATACTT...GATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GGCATCAGAGGTCTGGGTCACCATGAGCATCCCCTCTTCTGGGAGCTGGACTCCGTGGGCACTAAGTCGTaGGTAGATTTGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GIRGLGHHEHPLFWELDSVGTKS*VDLRGS
Trigger: GCTGCCCCTCAAATCTACCCACGACTTAGTGCCCAC...GGAGTCCAGCTCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCTCTGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCTTGGGGGCTCTGGGATaGGTCTCCCAAGTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LGPNGVRGPGPSILGPRALGALG*VSQVIL
Trigger: CAAAATGACTTGGGAGACCCATCCCAGAGCCCCCAA...GGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCGGTTTTAGGGGCCTATaGATGACAGGATTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: AARGPFLSPHRFICRSHSGFRGL*MTGFKG
Trigger: CCCCTTGAATCCTGTCATCCATAGGCCCCTAAAACC...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp CAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATCAGGTCTGGGTCACCATaGGCATCCCCTCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QCILRVWGPRVSGSSLDIRSGSP*ASPLLG
Trigger: TCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCT...GATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCTCTGGTATGGAGGGATaGAGGTCTTGGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGPNGVRGPGPSILGPRASGMEG*RSWIRN
Trigger: GTTCCTGATCCAAGACCTTCATCCCTCCATACCAGA...GGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGAAGCCCATACAACATTaGGACTGTCTTGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGKPIQH*DCLAPR
Trigger: TCTTGGAGCAAGACAGTCTCAATGTTGTATGGGCTT...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCTGGCCTTTCTGAGATaGAAAGTATGGGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGLAFLR*KVWGRL
Trigger: CAGGCGTCCCCATACTTTGCATCTCAGAAAGGCCAG...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGTGTTGTAAACCAAGCCTaGCTTCAGTGTACACTCCAA +
Preference number: 4 (lower is better)
Translates to: SWTLNFGSSGRLGDPPGRVVNQA*LQCTLQ
Trigger: TTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAAC...ACGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp CTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTCCTGGCGGCTGTGACTaGAGGAGGAGTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGLGFRSERSPGSWTLNFPGGCD*RRSRCP
Trigger: TGGACAGCGACTCCTCCTCCAGTCACAGCCGCCAGG...AAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp GCTACTCGGGAGGCTGAGGCAGACGAATGGCTTGAACCCGGGAGGGGGAGGTTGTTCAGGAACTGTTTGTaGGTGACTCCAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: ATREAEADEWLEPGRGRLFRNCL*VTPGPM
Trigger: CATAGGACCTGGAGTCACCCACAAACAGTTCCTGAA...CAACCTCCCCCTCCCGGGTTCAAGCCATTCGTCTGCCTCAGCCTCCCGAGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGCTTCCAGAGCATCTTaGTGTCTGATATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RTESGVLDPQFWVLGPARASRAS*CLISGS
Trigger: AGATCCAGATATCAGACACCAAGATGCTCTGGAAGC...CCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCCAAGACTGGGGGCTGTaGGACAGCAGAGCCATAACT +
Preference number: 4 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFQDWGL*DSRAIT
Trigger: AGTTATGGCTCTGCTGTCCCACAGCCCCCAGTCTTG...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATGAAGGTCTGCAAGACTaGGGGCTGTGGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNEGLQD*GLWDSR
Trigger: TCTGCTGTCCCACAGCCCCCAGTCTTGCAGACCTTC...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCACAGAAGAGACTCAGTaGGCCATGAAACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AARGPFLSPHRFICRSHSTEETQ*AMKQAF
Trigger: GAAAGCCTGTTTCATGGCCCACTGAGTCTCTTCTGT...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATGCTCCCTGGCCTTTCTaGGATGCAAAGTATGGGGAC +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNAPWPF*DAKYGD
Trigger: GTCCCCATACTTTGCATCTCAGAAAGGCCAGGGAGC...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp CATTTGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGGGGTCACTCAAGGGCTaGGGGCCAAGGGCATCAGAG +
Preference number: 4 (lower is better)
Translates to: HLGSQNPGPGGTAREGYLGSLKG*GPRASE
Trigger: CTCTGATGCCCTTGGCCCTCAGCCCTTGAGTGACCC...CAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCCAGACTAGAGAGGTTTaGATCCAAAGAAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: AARGPFLSPHRFICRSHSQTREV*IQRNLG
Trigger: CCCCAGATTTCTTTGGATTCAAACCTCTCTAGTCTG...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAATTTCAACAGGGACCTaGCCTTTTCGGGATCTATGT +
Preference number: 4 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLISTGT*PFRDLC
Trigger: ACATAGATCCCGAAAAGGGCAGGTCCCTGTTGAAAT...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTCCAGTGGTGAAAGATaGGATTCACCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GPNGVRGPGPSILGPRAGSSGER*DSPCCK
Trigger: TTTACAACAAGGTGAATCCCATCTTTCACCACTGGA...GCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CCA 90 bp AGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGATTGAGGTCACAGACTaGCTTAGAAACAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: RSERSPGSWTLNFGSSGRIEVTD*LRNKIR
Trigger: CCTGATCTTGTTTCTAAGCCAGTCTGTGACCTCAAT...CCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp CCAAACTCAAGCTCCAAGTTCCGGATGTGCCTAGGTTaGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PNSSSKFRMCLG*GFRSERSPGSW
Trigger: CCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCACATCCGGAACTTGGAGCTTGAGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp ACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTaGATCCCTGGCTTCCAGAGCATCTTGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLAWGWVDLWRS*IPGFQSILVSD
Trigger: ATCAGACACCAAGATGCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp CTTGGGGCCAGATGCAGGTCCCAAGCCCATACAACATaGAGACTGTCTTGCTCCAAGACCTTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGARCRSQAHTT*RLSCSKTLRPP
Trigger: TGGGGGCCTCAAGGTCTTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGTCTGAGTCCTATAAATaGTATCCAAAGCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGSESYK*YPKLLR
Trigger: TCTCAGGAGCTTTGGATATCATTTATAGGACTCAGA...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATGAACTCATCAGCCTCTaGAGGGCTCTGAAACGTCAG +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNELISL*RALKRQ
Trigger: CTGACGTTTCAGAGCCCTGCAGAGGCTGATGAGTTC...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTTCCAAGGTTGTTTTCTaGTCCCGGAGGCGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: LGLGFRSERSPGSWTLNFSKVVF*SRRRSP
Trigger: CGGGGAACGCCTCCGGGACCAGAAAACAACCTTGGA...AAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCCTGTCTCAGGGGTCCTaGGACTATGAGAATGTCTCA +
Preference number: 4 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFLSQGS*DYENVS
Trigger: TGAGACATTCTCATAGTCCCAGGACCCCTGAGACAG...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp GGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGAGAACGGATCTTGGGGGCTCTaGGATGGGTCTCCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GVSKSRSRRDCKRGLFENGSWGL*DGSPKS
Trigger: TGACTTGGGAGACCCATCCCAGAGCCCCCAAGATCC...GTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCCTGAGGTCCGACAAGTaGGGATGGGGGAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVLRSDK*GWGNQV
Trigger: CACCTGATTCCCCCATCCCCACTTGTCGGACCTCAG...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCTCTGAGGGCACAGTGTaGCCAGCAGACTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVSEGTV*PADWCD
Trigger: GTCACACCAGTCTGCTGGCCACACTGTGCCCTCAGA...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATGTCACAGACATTTCTTaGAGCAGATCTCGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNVTDIS*SRSRAP
Trigger: GGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGAC...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGGTCTCCTGGCGGCTGTaGCTGGAGGAGGAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLVSWRL*LEEESL
Trigger: CAGCGACTCCTCCTCCAGTCACAGCCGCCAGGAGAC...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TGGGGCCAGATGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAAGTGCACAGTTCCAGATaGTTGGGGCCAGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: WGQMQVPSPYNIETVLLQVHSSR*LGPDAG
Trigger: ACCTGCATCTGGCCCCAAGCATCTGGAACTGTGCAC...TTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATCTTGGTGTCTGATATCTaGATCTTGGGGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QCILRVWGPRVSGSSLDILVSDI*ILGALG
Trigger: TCCCAGAGCCCCCAAGATCCAGATATCAGACACCAA...GATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCGTCCTGAGGTGTTGGTaGCCTTCAGTCGCACATCTG +
Preference number: 4 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVVLRCW*PSVAHL
Trigger: CAGATGTGCGACTGAAGGCCACCAACACCTCAGGAC...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCAGATCTTCGATCCACTaGAAGCCCCATTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFRSSIH*KPHFTW
Trigger: CCAAGTGAAATGGGGCTTCCAGTGGATCGAAGATCT...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp GAGGCCAGGTCTGTGGGCACTAAGTCGTGGGTAGATTaGAGGGGCAGCATCTGGAGATTCCAGAGCATAACA +
Preference number: 4 (lower is better)
Translates to: EARSVGTKSWVD*RGSIWRFQSIT
Trigger: TGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAAATCTACCCACGACTTAGTGCCCACAGACCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATCTGCATAATCATCTGTaGCAATGCTGGGTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNLHNHL*QCWVLD
Trigger: GTCTAGGACCCAGCATTGTCACAGATGATTATGCAG...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TTCATCAGACTAGAGAGGTTTGAATCCAAAGAAATCTGGGGTCTGAGGGTGCTGGCCAAGCATCCGATCTaGGGGGCAAGCGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FIRLERFESKEIWGLRVLAKHPI*GASGWE
Trigger: TTCCCAGCCGCTTGCCCCTCAGATCGGATGCTTGGC...CAGCACCCTCAGACCCCAGATTTCTTTGGATTCAAACCTCTCTAGTCTGATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp GGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGAGAACAGGTCCAGGAGGGACTaGAAGAGAGGGCTATTTGAG +
Preference number: 4 (lower is better)
Translates to: GVSKSRSRRDCKRGLFENRSRRD*KRGLFE
Trigger: CTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCT...GTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp GGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGAGAACAGATATATGTTGGGGTaGCTCCCCCAAATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GVSKSRSRRDCKRGLFENRYMLG*LPQIWG
Trigger: CCCCCAGATTTGGGGGAGGCACCCCAACATATATCT...GTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCAACCCTGCTCTCCCATaGAATGTTCCCTCAACCCTC +
Preference number: 4 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVNPALP*NVPSTL
Trigger: GAGGGTTGAGGGAACATTCCATGGGAGAGCAGGGTT...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGGGCCAGATGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAAGGTCAGTGGCACCTTTaGGGTATTGGATCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WGQMQVPSPYNIETVLLQGQWHL*GIGSSA
Trigger: AGCACTGGATCCAATACCCCAAAGGTGCCACTGACC...TTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGCCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATCTTCTCACTCTAAAGTaGAAGAGAGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CLGLGFRSERSPGSWTLNLLTLK*KRARCS
Trigger: ACTGCACCTGGCTCTCTTCCACTTTAGAGTGAGAAG...ATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp GCCTTGCATTTGGGGGTCAGTGGCACCTTTGGGGTATaGGATCCAGTGCTCCTAAAGTACCTTAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: ALHLGVSGTFGV*DPVLLKYLRVT
Trigger: AGTGACCCTAAGGTACTTTAGGAGCACTGGATCCAATACCCCAAAGGTGCCACTGACCCCCAAATGCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TCGTGGGTAGATTTGAGGGGCAGCATCTGGAGATTCCAGAGCATAACAGAGTTTCAGTATCTCGGGTCCTaGGGTGTTGGTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SWVDLRGSIWRFQSITEFQYLGS*GVGGLQ
Trigger: CTGAAGGCCACCAACACCTCAGGACCCGAGATACTG...AAACTCTGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAAATCTACCCACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp CATTTTGGTAAGAGAACAGCTCGTGTTTCAGTATATCCGAGCACTCAGTGCATCGGGGCAGCAGGTCTCTaGGGTCCGACAAGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HFGKRTARVSVYPSTQCIGAAGL*GPTSGD
Trigger: ATCCCCACTTGTCGGACCTCAGAGACCTGCTGCCCC...GATGCACTGAGTGCTCGGATATACTGAAACACGAGCTGTTCTCTTACCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACAGACTCAGTGGGCCATaGAACAGGCTTTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDRLSGP*NRLSNF
Trigger: GAAGTTTGAAAGCCTGTTTCATGGCCCACTGAGTCT...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCCTGATTTGGGGGCAATaGAGGGGAATCATGGATCAG +
Preference number: 4 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVLIWGQ*RGIMDQ
Trigger: CTGATCCATGATTCCCCTTCATTGCCCCCAAATCAG...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CAATGTTGTAGGGTCTTGAGCCTTGCATTTGGGGGTCAGTGGCACCTTTGGGGTAGAACTCAGGACGCCTaGGACTTCTTAGACAGACAC +
Preference number: 4 (lower is better)
Translates to: QCCRVLSLAFGGQWHLWGRTQDA*DFLDRH
Trigger: GTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCT...ACCCCAAAGGTGCCACTGACCCCCAAATGCAAGGCTCAAGACCCTACAACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTAGAATGTCTCAGATGTaGGGGCACCAGGTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: LGLGFRSERSPGSWTLNFRMSQM*GHQVLG
Trigger: ACCTAAGACCTGGTGCCCCCACATCTGAGACATTCT...AAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCGAGGTCTTTGATCCCTaGCTTCCAGAGCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVEVFDP*LPEHLG
Trigger: ACCAAGATGCTCTGGAAGCCAGGGATCAAAGACCTC...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TCGTGGGTAGATTTGAGGGGCAGCATCTGGAGATTCCAGAGCATAACAGAGTTTAGGGCATCAGAGGTCTaGGTCACCATGAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: SWVDLRGSIWRFQSITEFRASEV*VTMSIP
Trigger: GGGGATGCTCATGGTGACCCAGACCTCTGATGCCCT...AAACTCTGTTATGCTCTGGAATCTCCAGATGCTGCCCCTCAAATCTACCCACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCAGCATTTGGGGGTCAGTaGCACCTTTGGGGTATTGGA +
Preference number: 4 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPAAFGGQ*HLWGIG
Trigger: TCCAATACCCCAAAGGTGCCACTGACCCCCAAATGC...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp CTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTCAAGAGAGGGCTATTTaGGAACTCGAGACCAGTATC +
Preference number: 4 (lower is better)
Translates to: LGLGFRSERSPGSWTLNFQERAI*ELETSI
Trigger: GATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTG...AAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp CATTTGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGACGGTCTCACTACATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: HLGSQNPGPGGTAREGYLTVSLH*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAATGTAGTGAGACCGT...CAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp CTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTAAACCCTGGGCTGTGTaGCTTCACTTAATGAAGACC +
Preference number: 4 (lower is better)
Translates to: LGLGFRSERSPGSWTLNFKPWAV*LHLMKT
Trigger: GGTCTTCATTAAGTGAAGGCACACAGCCCAGGGTTT...AAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TTCATCAGACTAGAGAGGTTTGAATCCAAAGAAATCTGGGGTCTGAGGGTGCTGGGGTGGGTGGACCTATaGAGGTCTTTGATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FIRLERFESKEIWGLRVLGWVDL*RSLIPG
Trigger: GCCAGGGATCAAAGACCTCCATAGGTCCACCCACCC...CAGCACCCTCAGACCCCAGATTTCTTTGGATTCAAACCTCTCTAGTCTGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp GGAATCAGGTGTAGAGGCAACTTGGGGTTCATCAGACTAGAGAGGTTTGAATCCGGAACTGTTTGTGGGTaGCTCCAGGTCCTATGGTCT +
Preference number: 4 (lower is better)
Translates to: GIRCRGNLGFIRLERFESGTVCG*LQVLWS
Trigger: AGACCATAGGACCTGGAGTCACCCACAAACAGTTCC...GGATTCAAACCTCTCTAGTCTGATGAACCCCAAGTTGCCTCTACACCTGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR TCA 90 bp TGGGGCCAGATGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAAGCACCAGGTCTTAGGTaGATATTCAGGAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: WGQMQVPSPYNIETVLLQAPGLR*IFRNCL
Trigger: CAAACAGTTCCTGAATATTCACCTAAGACCTGGTGC...TTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGCCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTCTCAAGATCTGATCTaGGAGTTGAATAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CLGLGFRSERSPGSWTLNSQDLI*ELNKGR
Trigger: TCTGCCTTTATTCAACTCCCAGATCAGATCTTGAGA...ATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TGGGGCCAGATGCAGGTCCCAAGCCCATACAACATTGAGACTGTCTTGCTCCAAAGATTCCAGGACATTTaGGGTCTCAAAATCCAGGTC +
Preference number: 4 (lower is better)
Translates to: WGQMQVPSPYNIETVLLQRFQDI*GLKIQV
Trigger: GACCTGGATTTTGAGACCCCAAATGTCCTGGAATCT...TTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTGGGACCTGCATCTGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCACAGGAAGATATATGTTaGGGTGCCTCCCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPAQEDIC*GASPKS
Trigger: AGATTTGGGGGAGGCACCCCAACATATATCTTCCTG...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp CTCCAGGTCCTATGGTCTCAAGATCTGATCTGGGAGTaGAATAAAGGCAGAGCCAGTTATGGGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LQVLWSQDLIWE*NKGRASYGQVL
Trigger: CAGGACTTGCCCATAACTGGCTCTGCCTTTATTCAACTCCCAGATCAGATCTTGAGACCATAGGACCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp TCTGTGGGTAGAAAGAAGCTGAAGATTCCAGGACATTaGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: SVGRKKLKIPGH*GSQNPGPGGTA
Trigger: TGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATGTCCTGGAATCTTCAGCTTCTTTCTACCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp ATCTTGGGGGCTCTGGGATGGGTCTCCCAAGTCATTTaGGTAAGAGAACAGCTCGTGTTTCAGTATATCCGA +
Preference number: 4 (lower is better)
Translates to: ILGALGWVSQVI*VREQLVFQYIR
Trigger: TCGGATATACTGAAACACGAGCTGTTCTCTTACCAAAATGACTTGGGAGACCCATCCCAGAGCCCCCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
3UTR CAA 72 bp GAATCTGAACGCCTCTGGTATGGAGGGATGAAGGTCTaGGATCAGGAACAATCCCAATGTTGTAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ESERLWYGGMKV*DQEQSQCCRVL
Trigger: CAAGACCCTACAACATTGGGATTGTTCCTGATCCAAGACCTTCATCCCTCCATACCAGAGGCGTTCAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp TTCATCAGACTAGAGAGGTTTGAATCCAAAGAAATCTGGGGTCTGAGGGTGCTGCAGCCCTTAAGGGGTTaGGAATCTGTGGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: FIRLERFESKEIWGLRVLQPLRG*ESVGRK
Trigger: CTTTCTACCCACAGATTCCCAACCCCTTAAGGGCTG...CAGCACCCTCAGACCCCAGATTTCTTTGGATTCAAACCTCTCTAGTCTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CCA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGCAGAATTCCAGAGGCTaGAACCTTGGGGTTTTAGGG +
Preference number: 4 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLQNSRG*NLGVLG
Trigger: CCCTAAAACCCCAAGGTTCCAGCCTCTGGAATTCTG...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp TTCATCAGACTAGAGAGGTTTGAATCCAAAGAAATCTGGGGTCTGAGGGTGCTGTTTTCGGGATCTATGTaGTCCCTGGCCTTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FIRLERFESKEIWGLRVLFSGSM*SLAFLR
Trigger: TCTCAGAAAGGCCAGGGAGCACATAGATCCCGAAAA...CAGCACCCTCAGACCCCAGATTTCTTTGGATTCAAACCTCTCTAGTCTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR GCA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGCCCACCACTTCAGCCTaGACTGACACTAACAATATT +
Preference number: 4 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLPTTSA*TDTNNI
Trigger: AATATTGTTAGTGTCAGTGCAGGCTGAAGTGGTGGG...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS GCA 90 bp GCGACCCGGGTCCGGGGCCTCTGCGCAGCGGCCGCCACGCCCGTCTaGTCTGCGACGGAAGAGCGCGCGGCAATGCACGCAGCGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ATRVRGLCAAAATPV*SATEERAAMHAARC
Trigger: GCAGCGCGCTGCGTGCATTGCCGCGCGCTCTTCCGTCGCAGAGCAGACGGGCGTGGCGGCCGCTGCGCAGAGGCCCCGGACCCGGGTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS CCA 90 bp CGGCTAGGGGACCCACCAGGCCGTCCTCACCGCGCAGCCTCCTCGTaGCGACCCCCGCAGCCGGCGCAGCCGCATCGCGCTGCGACCCAG +
Preference number: 5 (lower is better)
Translates to: RLGDPPGRPHRAASS*RPPQPAQPHRAATQ
Trigger: CTGGGTCGCAGCGCGATGCGGCTGCGCCGGCTGCGGGGGTCGCCACGAGGAGGCTGCGCGGTGAGGACGGCCTGGTGGGTCCCCTAGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS GCA 90 bp CCGGGTCCGGGGCCTCTGCGCAGCGGCCGCCACGCCCGTCTGCTCTaGGACGGAAGAGCGCGCGGCAATGCACGCAGCGCGCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PGPGPLRSGRHARLL*DGRARGNARSALPP
Trigger: AGGAGGCAGCGCGCTGCGTGCATTGCCGCGCGCTCTTCCGTCGCAGAGCAGACGGGCGTGGCGGCCGCTGCGCAGAGGCCCCGGACCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS GCA 90 bp AGCCTCCTCGTGGCGACCCCCGCAGCCGGCGCAGCCGCATCGCGCTaGGACCCAGTGGCACGCGCGCAGGGGCGCGTAGCAGCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SLLVATPAAGAAASR*DPVARAQGRVAAEA
Trigger: TGCCTCTGCTGCTACGCGCCCCTGCGCGCGTGCCACTGGGTCGCAGCGCGATGCGGCTGCGCCGGCTGCGGGGGTCGCCACGAGGAGGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS CCA 90 bp CTTGGCGAAGCGCACGACGCAGGTGGACAGGGCGAGGGGCGCGGGTaGCCCGGAGCGCCGGTAATCCTCGTAGCCGCGGCCGCCCCACCC +
Preference number: 5 (lower is better)
Translates to: LGEAHDAGGQGEGRG*PGAPVILVAAAAPP
Trigger: GGGTGGGGCGGCCGCGGCTACGAGGATTACCGGCGCTCCGGGCCACCCGCGCCCCTCGCCCTGTCCACCTGCGTCGTGCGCTTCGCCAAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS GCA 90 bp CGGCCGCCACGCCCGTCTGCTCTGCGACGGAAGAGCGCGCGGCAATaGACGCAGCGCGCTGCCTCCTCCGCTTCCGGGGAGGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RPPRPSALRRKSARQ*TQRAASSASGEALA
Trigger: TGCCAAGGCCTCCCCGGAAGCGGAGGAGGCAGCGCGCTGCGTGCATTGCCGCGCGCTCTTCCGTCGCAGAGCAGACGGGCGTGGCGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS CCA 90 bp CAGCGCCCCTCAACGCGCCGGTCTTGGCGAAGCGCACGACGCAGGTaGACAGGGCGAGGGGCGCGGGTGGCCCGGAGCGCCGGTAATCCT +
Preference number: 5 (lower is better)
Translates to: QRPSTRRSWRSARRR*TGRGARVARSAGNP
Trigger: AGGATTACCGGCGCTCCGGGCCACCCGCGCCCCTCGCCCTGTCCACCTGCGTCGTGCGCTTCGCCAAGACCGGCGCGTTGAGGGGCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS CCA 90 bp TGGGGGCCGCAGCGGCGCTGGGAGGAGTCTCCTGGCGGCTGTGACTaGAGGAGGAGTCGCTGTCCACGTGGGACGTCAGAGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: WGPQRRWEESPGGCD*RRSRCPRGTSEGRG
Trigger: CCCCCTGCCCTCTGACGTCCCACGTGGACAGCGACTCCTCCTCCAGTCACAGCCGCCAGGAGACTCCTCCCAGCGCCGCTGCGGCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
ENST00000587947.5
CDS GCA 90 bp GTCTGCTCTGCGACGGAAGAGCGCGCGGCAATGCACGCAGCGCGCTaGCTCCTCCGCTTCCGGGGAGGCCTTGGCAGGCGCAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: VCSATEERAAMHAAR*LLRFRGGLGRRRGW
Trigger: CCATCCTCTGCGCCTGCCAAGGCCTCCCCGGAAGCGGAGGAGGCAGCGCGCTGCGTGCATTGCCGCGCGCTCTTCCGTCGCAGAGCAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS-3UTR CAA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCTCAACGCGCCGGTCTaGGCGAAGCGCACGACGCAG +
Preference number: 5 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGLNAPV*AKRTTQ
Trigger: CTGCGTCGTGCGCTTCGCCAAGACCGGCGCGTTGAG...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CAA 90 bp GGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCCACAGTTCCAGATGCTaGGGGCCAGATGCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: GPNGVRGPGPSILGPRAGHSSRC*GPDAGP
Trigger: GGGACCTGCATCTGGCCCCAAGCATCTGGAACTGTG...GCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGTGTACACTCCAAGGTaGTCTGCGAGGCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGVYTPR*SARLRP
Trigger: CGGCCGGAGCCTCGCAGACAACCTTGGAGTGTACAC...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS CCA 90 bp CTGTCCACGTGGGACGTCAGAGGGCAGGGGGTCTCTGCAGTATCCTaGGAAGGAGAGGAGGAGGAGGAGGAGGAGGAGGGGGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LSTWDVRGQGVSAVS*EGEEEEEEEEGVSE
Trigger: CTCACTCACCCCCTCCTCCTCCTCCTCCTCCTCCTCTCCTTCCCAGGATACTGCAGAGACCCCCTGCCCTCTGACGTCCCACGTGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
ENST00000587947.5
CDS-3UTR CAA 90 bp GGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCGTGTACACTCCAAGGTaGTTTTCTGGTCCCGGAGGC +
Preference number: 5 (lower is better)
Translates to: GPNGVRGPGPSILGPRAGVYTPR*FSGPGG
Trigger: GCCTCCGGGACCAGAAAACAACCTTGGAGTGTACAC...GCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS CCA 90 bp GGGCCATCACCACAGCTCGGACCCGCACCATGTACCTGCAGGAGGTaGGGGGAAGGACAGGGACAACACAGTCATGAGCTCAAACCCTGC +
Preference number: 5 (lower is better)
Translates to: GPSPQLGPAPCTCRR*GEGQGQHSHELKPC
Trigger: GCAGGGTTTGAGCTCATGACTGTGTTGTCCCTGTCCTTCCCCCCACCTCCTGCAGGTACATGGTGCGGGTCCGAGCTGTGGTGATGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS CCA 90 bp AAGTACTGGGAGAGCGTCAGAGGGCAGGGGGTCTCTGCAGTATCCTaGGAAGGAGAGGAGGAGGAGGAGGAGGAGGAGGGGGTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: KYWESVRGQGVSAVS*EGEEEEEEEEGVSE
Trigger: CTCACTCACCCCCTCCTCCTCCTCCTCCTCCTCCTCTCCTTCCCAGGATACTGCAGAGACCCCCTGCCCTCTGACGCTCTCCCAGTACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586958.1
ENST00000587564.2
CDS-3UTR CAA 90 bp TGCCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATCTCAACGCGCCGGTCTaGGCGAAGCGCACGACGCAG +
Preference number: 5 (lower is better)
Translates to: CLGLGFRSERSPGSWTLNLNAPV*AKRTTQ
Trigger: CTGCGTCGTGCGCTTCGCCAAGACCGGCGCGTTGAG...ATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CAA 90 bp GCTACTCGGGAGGCTGAGGCAGACGAATGGCTTGAACCCGGGAGGGGGAGGTTGCTTGGGCTGGGATCCTaGGGACCAGAATTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: ATREAEADEWLEPGRGRLLGLGS*GPEFQR
Trigger: CCTCTGGAATTCTGGTCCCAAGGATCCCAGCCCAAG...CAACCTCCCCCTCCCGGGTTCAAGCCATTCGTCTGCCTCAGCCTCCCGAGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp TCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCCGTCAGAGGACCTATCCCTaGAACCCCAACAAGGCCATC +
Preference number: 5 (lower is better)
Translates to: SWTLNFGSSGRLGDPPGRQRTYP*NPNKAI
Trigger: GATGGCCTTGTTGGGGTTCAAGGGATAGGTCCTCTG...ACGGCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTACGGATGTGCCTAGGTTaGGGTTTTAGGTCCGAACGG +
Preference number: 5 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLRMCLG*GFRSER
Trigger: CCGTTCGGACCTAAAACCCAAACCTAGGCACATCCG...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GCTACTCGGGAGGCTGAGGCAGACGAATGGCTTGAACCCGGGAGGGGGAGGTTGGACCTATGGAGGTCTTaGATCCCTGGCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: ATREAEADEWLEPGRGRLDLWRS*IPGFQS
Trigger: GCTCTGGAAGCCAGGGATCAAAGACCTCCATAGGTC...CAACCTCCCCCTCCCGGGTTCAAGCCATTCGTCTGCCTCAGCCTCCCGAGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GGGGGCCAAGCATCCGATCTGAGGGGCAAGCGGCTGGGAAATTGGGCCTGGGGGCAATGTTGTAGGGTCTaGAGCCTTGCATTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GGQASDLRGKRLGNWAWGQCCRV*SLAFGG
Trigger: ACCCCCAAATGCAAGGCTCAAGACCCTACAACATTG...CCCCCAGGCCCAATTTCCCAGCCGCTTGCCCCTCAGATCGGATGCTTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGGACCCACCAGGCAACATTGAGACTGTCTaGCTCCAAGACCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GSWTLNFGSSGRLGDPPGNIETV*LQDLEA
Trigger: GGCCTCAAGGTCTTGGAGCAAGACAGTCTCAATGTT...GCCTGGTGGGTCCCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS GCA 90 bp TGCGGCCAGCGCAGCCAGCAGGCTCTTCTGGAACTCATCAGCCTCTaGAGGGCTCTGAAACGTCAGTCCAAACTTGCAGTCACCCAGGCT +
Preference number: 5 (lower is better)
Translates to: CGQRSQQALLELISL*RALKRQSKLAVTQA
Trigger: AGCCTGGGTGACTGCAAGTTTGGACTGACGTTTCAGAGCCCTGCAGAGGCTGATGAGTTCCAGAAGAGCCTGCTGGCTGCGCTGGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000586958.1
ENST00000587013.5
ENST00000587564.2
ENST00000587947.5
ENST00000590962.1
CDS-3UTR CAA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCAACGTCAGTCCAAACTaGCAGTCACCCAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGNVSPN*QSPRLQ
Trigger: CTGGAGCCTGGGTGACTGCAAGTTTGGACTGACGTT...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CAA 90 bp CAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATCTCGGGTCCTGAGGTGTaGGTGGCCTTCAGTCGCACA +
Preference number: 5 (lower is better)
Translates to: QCILRVWGPRVSGSSLDISGPEV*VAFSRT
Trigger: TGTGCGACTGAAGGCCACCAACACCTCAGGACCCGA...GATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp TCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGAGGGATGAAGGTCTaGGATCAGGAACAATCCCAA +
Preference number: 5 (lower is better)
Translates to: SERSPGSWTLNFGSSGRLGGMKV*DQEQSQ
Trigger: TTGGGATTGTTCCTGATCCAAGACCTTCATCCCTCC...TAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCTCTGATATCTGGATCTaGGGGGCTCTGGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFSDIWI*GALGWV
Trigger: GACCCATCCCAGAGCCCCCAAGATCCAGATATCAGA...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCCCTGAGAACCCTGGCTaGGGGGTGGGTGGACCTATG +
Preference number: 5 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVPENPG*GVGGPM
Trigger: CATAGGTCCACCCACCCCCAAGCCAGGGTTCTCAGG...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCACCCATCTGCGCCATaGGTCTCTAATGCTATGAGG +
Preference number: 5 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGHPSAP*VSNAMR
Trigger: CCTCATAGCATTAGAGACCAATGGCGCAGATGGGTG...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS TCA 90 bp CATAAGGATGCGGTTAGGGCCACTGTCAAGGGCACAGCATATGCCTaGAGTACTGGGAGAGCGTCAGAGGGCAGGGGGTCTCTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: HKDAVRATVKGTAYA*STGRASEGRGSLQY
Trigger: ATACTGCAGAGACCCCCTGCCCTCTGACGCTCTCCCAGTACTTCAGGCATATGCTGTGCCCTTGACAGTGGCCCTAACCGCATCCTTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586958.1
ENST00000587564.2
CDS-3UTR CAA 90 bp TGCCTAGGTTTGGGTTTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATAACGTCAGTCCAAACTaGCAGTCACCCAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CLGLGFRSERSPGSWTLNNVSPN*QSPRLQ
Trigger: CTGGAGCCTGGGTGACTGCAAGTTTGGACTGACGTT...ATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAAACCCAAACCTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338502.8
ENST00000587013.5
CDS-3UTR CAA 90 bp GAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCCGGCTAGGGAGTTTCAAACTCTGTTaGAAACTTTCTCAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ERSPGSWTLNFGSSGRLGSFKLC*KLSQGS
Trigger: GGACCCCTGAGAAAGTTTCAAACAGAGTTTGAAACT...CCCTAGCCGGCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GCGGCCAGGGGACCTTTCCTTAGCCCCCACCGCTTCATCTGCAGATCCCACAGCAAGATTCCAGGACATTaGGGGTCTCAAAATCCAGGT +
Preference number: 5 (lower is better)
Translates to: AARGPFLSPHRFICRSHSKIPGH*GSQNPG
Trigger: ACCTGGATTTTGAGACCCCAAATGTCCTGGAATCTT...GCTGTGGGATCTGCAGATGAAGCGGTGGGGGCTAAGGAAAGGTCCCCTGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp AGAACCCTGGCTTGGGGGTGGGTGGACCTATGGAGGTCTTTGATCCCTGGCTTCGGCACCTTTGGGGTATaGGATCCAGTGCTCCTAAAG +
Preference number: 5 (lower is better)
Translates to: RTLAWGWVDLWRSLIPGFGTFGV*DPVLLK
Trigger: CTTTAGGAGCACTGGATCCAATACCCCAAAGGTGCC...GAAGCCAGGGATCAAAGACCTCCATAGGTCCACCCACCCCCAAGCCAGGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGAGAACGAGGGTGCTGGGGTCTaGGGGCACCTCGAATCTGAA +
Preference number: 5 (lower is better)
Translates to: GVSKSRSRRDCKRGLFENEGAGV*GHLESE
Trigger: TTCAGATTCGAGGTGCCCCAAGACCCCAGCACCCTC...GTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS CCA 90 bp GCTCCAGTGGTGAAAGATGGGATTCACCTTGTTGTAAACCAAGCCTaGCTTCAGTGTACACTCCAAGGTTGTCTGCGAGGCTCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: APVVKDGIHLVVNQA*LQCTLQGCLRGSGR
Trigger: CCGGCCGGAGCCTCGCAGACAACCTTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAACAAGGTGAATCCCATCTTTCACCACTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS-3UTR CAA 90 bp TTTAGGTCCGAACGGAGTCCGGGGTCCTGGACCCTCAATTTTGGGTCCTCGGGCGATCTGATCTGGGAGTaGAATAAAGGCAGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: FRSERSPGSWTLNFGSSGDLIWE*NKGRAS
Trigger: ACTGGCTCTGCCTTTATTCAACTCCCAGATCAGATC...GCCCGAGGACCCAAAATTGAGGGTCCAGGACCCCGGACTCCGTTCGGACCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GGCATCAGAGGTCTGGGTCACCATGAGCATCCCCTCTTCTGGGAGCTGGACTCCGCAAGAGAGGGCTATTaGAGAACTCGAGACCAGTAT +
Preference number: 5 (lower is better)
Translates to: GIRGLGHHEHPLFWELDSAREGY*RTRDQY
Trigger: ATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGC...GGAGTCCAGCTCCCAGAAGAGGGGATGCTCATGGTGACCCAGACCTCTGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp CATTTGGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGGGGTCAGTGGCACCTTaGGGGTATTGGATCCAGTGC +
Preference number: 5 (lower is better)
Translates to: HLGSQNPGPGGTAREGYLGSVAP*GYWIQC
Trigger: GCACTGGATCCAATACCCCAAAGGTGCCACTGACCC...CAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp CAGTGCATCTTAAGAGTCTGGGGTCCCAGGGTGTCTGGGAGTTCCCTGGACATCATATTCAGGAACTGTTaGTGGGTGACTCCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: QCILRVWGPRVSGSSLDIIFRNC*WVTPGP
Trigger: AGGACCTGGAGTCACCCACAAACAGTTCCTGAATAT...GATGTCCAGGGAACTCCCAGACACCCTGGGACCCCAGACTCTTAAGATGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACGGCTTCCAGAGCATCTaGGTGTCTGATATCTGGATC +
Preference number: 5 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDGFQSI*VSDIWI
Trigger: GATCCAGATATCAGACACCAAGATGCTCTGGAAGCC...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp TGGGGGAACGCCAGAACTCAGGACGCCTGGGACTTCTTAGACAGACACCCCAATCAAGCCCATACAACATaGAGACTGTCTTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: WGNARTQDAWDFLDRHPNQAHTT*RLSCSK
Trigger: CTTGGAGCAAGACAGTCTCAATGTTGTATGGGCTTG...ATTGGGGTGTCTGTCTAAGAAGTCCCAGGCGTCCTGAGTTCTGGCGTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACTCAGGAAGATATATGTaGGGGTGCCTCCCCCAAATC +
Preference number: 5 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDSGRYM*GCLPQI
Trigger: GATTTGGGGGAGGCACCCCAACATATATCTTCCTGA...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp GGGGTCTCAAAATCCAGGTCCAGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTGTCACAGACATTTCTaGGAGCAGATCTCGTGCCCC +
Preference number: 5 (lower is better)
Translates to: GVSKSRSRRDCKRGLFENCHRHF*EQISCP
Trigger: GGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACA...GTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCTGGACCTGGATTTTGAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS GCA 90 bp TCAACCCCATGGCCACCGTCTTCCACACAGCTCCTTTCTTCCTCATaGCATCTCTTCTCTCTCACCTCTATCTTCTTCTCCATGTCTGCC +
Preference number: 5 (lower is better)
Translates to: STPWPPSSTQLLSSS*HLFSLTSIFFSMSA
Trigger: GGCAGACATGGAGAAGAAGATAGAGGTGAGAGAGAAGAGATGGCATGAGGAAGAAAGGAGCTGTGTGGAAGACGGTGGCCATGGGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587947.5
CDS CCA 90 bp GCTCCAGTGGTGAAAGATGGGATTCACCTTGTTGTAAACCAAGCCTaGCTTCAGTGTACACTCCAAGGTTGTTTTCTGGTCCCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: APVVKDGIHLVVNQA*LQCTLQGCFLVPEA
Trigger: CGCCTCCGGGACCAGAAAACAACCTTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAACAAGGTGAATCCCATCTTTCACCACTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587564.2
ENST00000587947.5
CDS-3UTR CAA 90 bp GACTTTGTCACAGACATTTCTTGGAGCAGATCTCGTGCCCCCTCCCCCGATGACGTCTCCCAAGTCATTTaGGTAAGAGAACAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: DFVTDISWSRSRAPSPDDVSQVI*VREQLV
Trigger: CACGAGCTGTTCTCTTACCAAAATGACTTGGGAGAC...GTCATCGGGGGAGGGGGCACGAGATCTGCTCCAAGAAATGTCTGTGACAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp AGCCTGAAAGTTTCCATTGCACACACTTCTTCTGAGGGCACAGTGTGGCCAGCAAGGTGTAGAGGCAACTaGGGGTTCATCAGACTAGAG +
Preference number: 5 (lower is better)
Translates to: SLKVSIAHTSSEGTVWPARCRGN*GFIRLE
Trigger: CTCTAGTCTGATGAACCCCAAGTTGCCTCTACACCT...TGCTGGCCACACTGTGCCCTCAGAAGAAGTGTGTGCAATGGAAACTTTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp CTTGAACCTGGACTAGGAATTAAGGTTGTGCTTGAAGGAAGGTCTGCAAGACTGCATCCCAGGGTCTGGTaGGGAGTGCTGAATCTCACA +
Preference number: 5 (lower is better)
Translates to: LEPGLGIKVVLEGRSARLHPRVW*GVLNLT
Trigger: TGTGAGATTCAGCACTCCCAACCAGACCCTGGGATG...CAGTCTTGCAGACCTTCCTTCAAGCACAACCTTAATTCCTAGTCCAGGTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS-3UTR CAA 90 bp AGGAGGGACTGCAAGAGAGGGCTATTTGAGAACTCGAGACCAGTATCTCGGGTCCTGACACTAACAATATaGAGGTCACAGACTGGCTTA +
Preference number: 5 (lower is better)
Translates to: RRDCKRGLFENSRPVSRVLTLTI*RSQTGL
Trigger: TAAGCCAGTCTGTGACCTCAATATTGTTAGTGTCAG...GACCCGAGATACTGGTCTCGAGTTCTCAAATAGCCCTCTCTTGCAGTCCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338502.8
CDS GCA 90 bp AAGCTCCAGGAGGAAAGGAACTTTTTGTTCACTGATGTAACCCAGTaGCTAAAGCACTGCCTGGTATACAGAAGGTACACAATAAGGACC +
Preference number: 5 (lower is better)
Translates to: KLQEERNFLFTDVTQ*LKHCLVYRRYTIRT
Trigger: GGTCCTTATTGTGTACCTTCTGTATACCAGGCAGTGCTTTAGGCACTGGGTTACATCAGTGAACAAAAAGTTCCTTTCCTCCTGGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590962.1
CDS GCA 72 bp GCGACGGAAGAGCGCGCGGCAATGCACGCAGCGCGCTaGCTCCTCCGCTTCCGGGGAGGCCTTGGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: ATEERAAMHAAR*LLRFRGGLGRR
Trigger: GCGCCTGCCAAGGCCTCCCCGGAAGCGGAGGAGGCAGCGCGCTGCGTGCATTGCCGCGCGCTCTTCCGTCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS CCA 72 bp GGGGACCCAGGGCAGCGCCCCTCAACGCGCCGGTCTTaGCGAAGCGCACGACGCAGGTGGACAGGGCGAGGG +
Preference number: 6 (lower is better)
Translates to: GDPGQRPSTRRS*RSARRRWTGRG
Trigger: CCCTCGCCCTGTCCACCTGCGTCGTGCGCTTCGCCAAGACCGGCGCGTTGAGGGGCGCTGCCCTGGGTCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS CAA 72 bp GGGGGACCCAGGGCAGCGCCCCTCAACGCGCCGGTCTaGGCGAAGCGCACGACGCAGGTGGACAGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: GGPRAAPLNAPV*AKRTTQVDRAR
Trigger: CCTCGCCCTGTCCACCTGCGTCGTGCGCTTCGCCAAGACCGGCGCGTTGAGGGGCGCTGCCCTGGGTCCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS GCA 72 bp CGCCCGTCTGCTCTGCGACGGAAGAGCGCGCGGCAATaGACGCAGCGCGCTGCCTCCTCCGCTTCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: RPSALRRKSARQ*TQRAASSASGE
Trigger: CTCCCCGGAAGCGGAGGAGGCAGCGCGCTGCGTGCATTGCCGCGCGCTCTTCCGTCGCAGAGCAGACGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587013.5
CDS CCA 72 bp GCCTCCTCCTCCTCCTTTTCGTTCCGGCTCCCTGGCTaGCTCCGGCGGCGCTGGAGACGGGCACCGGGAGCC +
Preference number: 6 (lower is better)
Translates to: ASSSSFSFRLPG*LRRRWRRAPGA
Trigger: GGCTCCCGGTGCCCGTCTCCAGCGCCGCCGGAGCCAGCCAGGGAGCCGGAACGAAAAGGAGGAGGAGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS GCA 72 bp TGGGGGAGGGGTAAGAGCGAGGCGGGCTTACTTGCCTaGTGGGTCCTAGAGCCCGGCACTAGCTCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: WGRGKSEAGLLA*WVLEPGTSSRE
Trigger: CTCTCTGGAGCTAGTGCCGGGCTCTAGGACCCAGCAGGCAAGTAAGCCCGCCTCGCTCTTACCCCTCCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS CAA 90 bp TCACCTTGTTGTAAACCAAGCCTGGCTTCAGTGTACACTCCAAGGTaGTCTGCGAGGCTCCGGCCGGGCTCCGAGCGGCGGCGACGCGGC +
Preference number: 6 (lower is better)
Translates to: SPCCKPSLASVYTPR*SARLRPGSERRRRG
Trigger: GCCGCGTCGCCGCCGCTCGGAGCCCGGCCGGAGCCTCGCAGACAACCTTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAACAAGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS CCA 72 bp GGGAGGGGTAAGAGCGAGGCGGGCTTACTTGCCTGCTaGGTCCTAGAGCCCGGCACTAGCTCCAGAGAGCAA +
Preference number: 6 (lower is better)
Translates to: GRGKSEAGLLAC*VLEPGTSSREQ
Trigger: TTGCTCTCTGGAGCTAGTGCCGGGCTCTAGGACCCAGCAGGCAAGTAAGCCCGCCTCGCTCTTACCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS CAA 72 bp TGTAAACCAAGCCTGGCTTCAGTGTACACTCCAAGGTaGTCTGCGAGGCTCCGGCCGGGCTCCGAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: CKPSLASVYTPR*SARLRPGSERR
Trigger: CCGCCGCTCGGAGCCCGGCCGGAGCCTCGCAGACAACCTTGGAGTGTACACTGAAGCCAGGCTTGGTTTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS TCA 72 bp GCGGTTAGGGCCACTGTCAAGGGCACAGCATATGCCTaGAGTACTGGGAGAGCGTCAGAGGGCAGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: AVRATVKGTAYA*STGRASEGRGS
Trigger: AGACCCCCTGCCCTCTGACGCTCTCCCAGTACTTCAGGCATATGCTGTGCCCTTGACAGTGGCCCTAACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586958.1
ENST00000587564.2
CDS CCA 72 bp GGCCACTGTCAAGGGCACAGCATATGCCTGAAGTACTaGGAGAGCGTCAGAGGGCAGGGGGTCTCTGCAGTA +
Preference number: 6 (lower is better)
Translates to: GHCQGHSICLKY*ESVRGQGVSAV
Trigger: TACTGCAGAGACCCCCTGCCCTCTGACGCTCTCCCAGTACTTCAGGCATATGCTGTGCCCTTGACAGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586958.1
ENST00000587564.2
CDS GCA 72 bp CGCAGCCAGCAGGCTCTTCTGGAACTCATCAGCCTCTaGAGGGCTCTGAAACGTCAGTCCAAACTTGCAGTC +
Preference number: 6 (lower is better)
Translates to: RSQQALLELISL*RALKRQSKLAV
Trigger: GACTGCAAGTTTGGACTGACGTTTCAGAGCCCTGCAGAGGCTGATGAGTTCCAGAAGAGCCTGCTGGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000586958.1
ENST00000587013.5
ENST00000587564.2
ENST00000587947.5
ENST00000590962.1
CDS CCA 72 bp CAAACTTGCAGTCACCCAGGCTCCAGTGGTGAAAGATaGGATTCACCTTGTTGTAAACCAAGCCTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: QTCSHPGSSGER*DSPCCKPSLAS
Trigger: TGAAGCCAGGCTTGGTTTACAACAAGGTGAATCCCATCTTTCACCACTGGAGCCTGGGTGACTGCAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000586958.1
ENST00000587013.5
ENST00000587564.2
ENST00000587947.5
CDS CCA 72 bp GTGAAAGATGGGATTCACCTTGTTGTAAACCAAGCCTaGCTTCAGTGTACACTCCAAGGTTGTCTGCGAGGC +
Preference number: 6 (lower is better)
Translates to: VKDGIHLVVNQA*LQCTLQGCLRG
Trigger: GCCTCGCAGACAACCTTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAACAAGGTGAATCCCATCTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587013.5
CDS CCA 72 bp GTGAAAGATGGGATTCACCTTGTTGTAAACCAAGCCTaGCTTCAGTGTACACTCCAAGGTTGTCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VKDGIHLVVNQA*LQCTLQGCLAE
Trigger: CTCAGCCAGACAACCTTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAACAAGGTGAATCCCATCTTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586958.1
CDS CCA 72 bp GTGAAAGATGGGATTCACCTTGTTGTAAACCAAGCCTaGCTTCAGTGTACACTCCAAGGTTGTTTTCTGGTC +
Preference number: 6 (lower is better)
Translates to: VKDGIHLVVNQA*LQCTLQGCFLV
Trigger: GACCAGAAAACAACCTTGGAGTGTACACTGAAGCCAGGCTTGGTTTACAACAAGGTGAATCCCATCTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338502.8
ENST00000586301.5
ENST00000587564.2
ENST00000587947.5
CDS TCA 72 bp ATAGAAGCTCCAGGAGGAAAGGAACTTTTTGTTCACTaGTGTAACCCAGTGCCTAAAGCACTGCCTGGTATA +
Preference number: 6 (lower is better)
Translates to: IEAPGGKELFVH*CNPVPKALPGI
Trigger: TATACCAGGCAGTGCTTTAGGCACTGGGTTACATCAGTGAACAAAAAGTTCCTTTCCTCCTGGAGCTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590962.1
CDS GCA 72 bp GAGGAAAGGAACTTTTTGTTCACTGATGTAACCCAGTaGCTAAAGCACTGCCTGGTATACAGAAGGTACACA +
Preference number: 6 (lower is better)
Translates to: EERNFLFTDVTQ*LKHCLVYRRYT
Trigger: TGTGTACCTTCTGTATACCAGGCAGTGCTTTAGGCACTGGGTTACATCAGTGAACAAAAAGTTCCTTTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590962.1
CDS GCA 72 bp TTTTTGTTCACTGATGTAACCCAGTGCCTAAAGCACTaGCTGGTATACAGAAGGTACACAATAAGGACCCTT +
Preference number: 6 (lower is better)
Translates to: FLFTDVTQCLKH*LVYRRYTIRTL
Trigger: AAGGGTCCTTATTGTGTACCTTCTGTATACCAGGCAGTGCTTTAGGCACTGGGTTACATCAGTGAACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590962.1