Pregenerated sensors for SPR (Homo sapiens)
Ensembl gene IDs: ENSG00000116096Ensembl transcript IDs: ENST00000234454.6
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCACAGCTGGCTGTGCCTaGGGGCAGGGCAGCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: HGSSYSTPDHSFLYPQACTAGCA*GQGSRH Trigger: ATGCCTGCTGCCCTGCCCTCAGGCACAGCCAGCTGT...GCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| 3UTR-3UTR CCA 90 bp | CATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCGTAAGGCCAATGACCTaGGAGCTCACAGCTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HGSSYSTPDHSFLYPQACVRPMT*ELTAGC Trigger: ACAGCCAGCTGTGAGCTCCCAGGTCATTGGCCTTAC...GCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTAGCAGGGCAGCAGGCATaGATGCTTCTATGTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: WVLLFDTRSLFPLPTGLLAGQQA*MLLCVR Trigger: CCTTACACATAGAAGCATTCATGCCTGCTGCCCTGC...TAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| 3UTR-3UTR TCA 90 bp | TCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCCACAGCACAGACTCCTaGCAACTGGTAAGGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: STWVLLFDTRSLFPLPTGHSTDS*QLVRPM Trigger: CATTGGCCTTACCAGTTGTCAGGAGTCTGTGCTGTG...GCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| 3UTR-3UTR GCA 90 bp | TCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCCCTTATAACCCAGGGTaGACAGCACAGACTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: STWVLLFDTRSLFPLPTGPYNPG*TAQTPD Trigger: GTCAGGAGTCTGTGCTGTGCACCCTGGGTTATAAGG...GCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| 3UTR-3UTR CCA 90 bp | AATCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGGAGCCACAGGGCTCTaGGGTATGTCTAAAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: NLHGSSYSTPDHSFLYPQGATGL*GMSKSG Trigger: CCCACTTTTAGACATACCCCAGAGCCCTGTGGCTCC...CTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAAGGGCGCCGAGCAGCTaGTGCAAGCCGGCCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQRAPSS*CKPASA Trigger: CGCCGAGGCCGGCTTGCAGCAGCTGCTCGGCGCCCT...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAGTCGCTGCAGCCCCTTaGGCCGGGGGAGCTCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQVAAAP*AGGARA Trigger: TGCGCGAGCTCCCCCGGCCCAAGGGGCTGCAGCGAC...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR TCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAACAGCTGGCTGTGCCTaGGGGCAGGGCAGCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQTAGCA*GQGSRH Trigger: ATGCCTGCTGCCCTGCCCTCAGGCACAGCCAGCTGT...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | AATCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGATAAGCAGCAGTCGCTaGAGCCCCTTGGGCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: NLHGSSYSTPDHSFLYPQISSSR*SPLGRG Trigger: CCCCCGGCCCAAGGGGCTGCAGCGACTGCTGCTTAT...CTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | CATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCGTCTCCCGGGCCAACTaGTGCATGTCTGTGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: HGSSYSTPDHSFLYPQACVSRAN*CMSVSR Trigger: TCTGGACACAGACATGCAGCAGTTGGCCCGGGAGAC...GCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | CATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTGTGTCCAGAGGACCTaGGGCATAGTTCAGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: HGSSYSTPDHSFLYPQACCVQRT*GIVQHP Trigger: AGGGTGCTGAACTATGCCCCAGGTCCTCTGGACACA...GCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCGGCATCTATGTGGGCTaGGACATGTACCGTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: STWVLLFDTRSLFPLPTGGIYVG*DMYRLP Trigger: GGGCAGACGGTACATGTCCCAGCCCACATAGATGCC...GCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | TGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTACCCATCCAGGCCATCTaGGAATCTACATGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: WVLLFDTRSLFPLPTGLLPIQAI*ESTWVL Trigger: GAGGACCCATGTAGATTCGCAGATGGCCTGGATGGG...TAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAGGGACATGTACCGTCTaGCCTTCCTCCCATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQGTCTV*PSSHPG Trigger: GCCTGGATGGGAGGAAGGGCAGACGGTACATGTCCC...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATCCAGCGCCAGGACCTaGAACAGCATATCACGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WVLLFDTRSLFPLPTGLLSSART*NSISRA Trigger: TGCTCGTGATATGCTGTTCCAGGTCCTGGCGCTGGA...TAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCGTAAGGCCAATGACCTaGGAGCTCACAGCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: STWVLLFDTRSLFPLPTGVRPMT*ELTAGC Trigger: ACAGCCAGCTGTGAGCTCCCAGGTCATTGGCCTTAC...GCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR TCA 90 bp | TGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTACGTGGGCTCCAGACTTaGACTCGTCCTTTTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: WVLLFDTRSLFPLPTGLLRGLQT*TRPFPV Trigger: TACTGGAAAAGGACGAGTTCAAGTCTGGAGCCCACG...TAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | AATCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGTCCCGGGCCAACTGCTaGATGTCTGTGTCCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: NLHGSSYSTPDHSFLYPQSRANC*MSVSRG Trigger: TCCTCTGGACACAGACATGCAGCAGTTGGCCCGGGA...CTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAAGGCCTTCAGGACGCTaGAAGTCAGGCAGAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQRPSGR*KSGRAW Trigger: CCATGCTCTGCCTGACTTCCAGCGTCCTGAAGGCCT...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR TCA 90 bp | AATCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGCCCACAGGCTTGCTATaGGCAAGAGACACAACCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLHGSSYSTPDHSFLYPQPTGLL*ARDTTS Trigger: GGAGGTTGTGTCTCTTGCTCATAGCAAGCCTGTGGG...CTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTAAAGCTCAGCAGTTTCTaGGCTGACACCTTGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: WVLLFDTRSLFPLPTGLLKLSSF*ADTLQS Trigger: GGATTGCAAGGTGTCAGCCCAGAAACTGCTGAGCTT...TAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAGGAGCCACAGGGCTCTaGGGTATGTCTAAAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQGATGL*GMSKSG Trigger: CCCACTTTTAGACATACCCCAGAGCCCTGTGGCTCC...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR TCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAGCAGGGCAGCAGGCATaGATGCTTCTATGTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQAGQQA*MLLCVR Trigger: CCTTACACATAGAAGCATTCATGCCTGCTGCCCTGC...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR TCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAACACAGCACAGACTCCTaGCAACTGGTAAGGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQHSTDS*QLVRPM Trigger: CATTGGCCTTACCAGTTGTCAGGAGTCTGTGCTGTG...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | AATCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGCCTTATAACCCAGGGTaGACAGCACAGACTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: NLHGSSYSTPDHSFLYPQPYNPG*TAQTPD Trigger: GTCAGGAGTCTGTGCTGTGCACCCTGGGTTATAAGG...CTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR GCA 90 bp | AATCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGCTCTACCCACAGGCTTaGTATGAGCAAGAGACACAA | + |
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Preference number: 4 (lower is better) Translates to: NLHGSSYSTPDHSFLYPQLYPQA*YEQETQ Trigger: TTGTGTCTCTTGCTCATAGCAAGCCTGTGGGTAGAG...CTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CCA 90 bp | TCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCTATGAGCAAATTTGTATCTGCCTTTaGCGTGTATACAGACACCCA | + |
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Preference number: 4 (lower is better) Translates to: SYSTPDHSFLYPQACYEQICICL*RVYRHP Trigger: TGGGTGTCTGTATACACGCCAAAGGCAGATACAAAT...TTGCTCATAGCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CAA 90 bp | CATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCCGCAGTGCCTCGTCGTaGCGGGCGCTAAGGACAAGC | + |
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Preference number: 5 (lower is better) Translates to: HGSSYSTPDHSFLYPQACRSASS*RALRTS Trigger: GCTTGTCCTTAGCGCCCGCAACGACGAGGCACTGCG...GCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CAA 90 bp | TCTACATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTATTTGTATCTGCCTTaGGCGTGTATACAGACACCC | + |
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Preference number: 5 (lower is better) Translates to: STWVLLFDTRSLFPLPTGYLYLP*ACIQTP Trigger: GGGTGTCTGTATACACGCCAAAGGCAGATACAAATA...GCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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| CDS-3UTR CAA 90 bp | CATGGGTCCTCCTATTCGACACCAGATCACTCTTTCCTCTACCCACAGGCTTGCCAATCTGTATTTTATTaGTATCTGCCTTTGGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: HGSSYSTPDHSFLYPQACQSVFY*YLPLAC Trigger: ACACGCCAAAGGCAGATACAAATAAAATACAGATTG...GCAAGCCTGTGGGTAGAGGAAAGAGTGATCTGGTGTCGAATAGGAGGACCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000234454.6 |
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