Pregenerated sensors for SPPL2C (Homo sapiens)
Ensembl gene IDs: ENSG00000185294, ENSG00000278194Ensembl transcript IDs: ENST00000329196.7, ENST00000610319.2, ENST00000621383.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGTGGAGTCCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCCTaGGCATGGACATGGCCCAGCTCTGAGGGCGGGGGCATCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LWSPAQGRPVSWAWA*AWTWPSSEGGGIRG Trigger: GCCCCTGATGCCCCCGCCCTCAGAGCTGGGCCATGTCCATGCCCAGGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329196.7 ENST00000621383.2 |
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| CDS CCA 90 bp | TTGTGGAGTCCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCTTaGGCATGGACGTGGCCCAGCTCTGAGGGCCGGGGCATCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LWSPAQGRPVSWAWA*AWTWPSSEGRGIRG Trigger: GCCCCTGATGCCCCGGCCCTCAGAGCTGGGCCACGTCCATGCCCAAGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS CCA 90 bp | GCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCCTGGGCATGGACATaGCCCAGCTCTGAGGGCGGGGGCATCAGGGGCATGAGTGGGATC | + |
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Preference number: 5 (lower is better) Translates to: AQGRPVSWAWAWAWT*PSSEGGGIRGMSGI Trigger: GATCCCACTCATGCCCCTGATGCCCCCGCCCTCAGAGCTGGGCCATGTCCATGCCCAGGCCCAGGCCCACGAGACTGGCCTGCCCTGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329196.7 ENST00000621383.2 |
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| CDS CCA 90 bp | GCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCTTGGGCATGGACGTaGCCCAGCTCTGAGGGCCGGGGCATCAGGGGCATGAGTGGGATC | + |
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Preference number: 5 (lower is better) Translates to: AQGRPVSWAWAWAWT*PSSEGRGIRGMSGI Trigger: GATCCCACTCATGCCCCTGATGCCCCGGCCCTCAGAGCTGGGCCACGTCCATGCCCAAGCCCAGGCCCACGAGACTGGCCTGCCCTGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS CCA 90 bp | AGTCCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCTTGGGCATaGACGTGGCCCAGCTCTGAGGGCCGGGGCATCAGGGGCATGAGT | + |
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Preference number: 5 (lower is better) Translates to: SPAQGRPVSWAWAWA*TWPSSEGRGIRGMS Trigger: ACTCATGCCCCTGATGCCCCGGCCCTCAGAGCTGGGCCACGTCCATGCCCAAGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS CCA 90 bp | AAACCCTTCCTCTTGTGGAGTCCCGCCCAGGGCAGGCCAGTCTCGTaGGCCTGGGCTTGGGCATGGACGTGGCCCAGCTCTGAGGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: KPFLLWSPAQGRPVS*AWAWAWTWPSSEGR Trigger: CCGGCCCTCAGAGCTGGGCCACGTCCATGCCCAAGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAAGAGGAAGGGTTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS CCA 90 bp | ACCCGGGCACCAGGGTGCCTTGGTGCCATCATACAGGGGCAGGAGTaGGGCGTGGTGCAGGTCCCGGGGGAGGGTGATGTAGTCGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: TRAPGCLGAIIQGQE*GVVQVPGEGDVVGA Trigger: AGCTCCGACTACATCACCCTCCCCCGGGACCTGCACCACGCCCCACTCCTGCCCCTGTATGATGGCACCAAGGCACCCTGGTGCCCGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 90 bp | GGCTGGCGGGGATCCTGGGGTGCCAGGGTGGTGTCTGAGCACTGTTaGTCACTGACCCGGCTCACGATGAGCAGCCCGTGGGCACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: GWRGSWGARVVSEHC*SLTRLTMSSPWAPW Trigger: CCAAGGTGCCCACGGGCTGCTCATCGTGAGCCGGGTCAGTGACCAACAGTGCTCAGACACCACCCTGGCACCCCAGGATCCCCGCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS TCA 90 bp | GGGCATGGACGTGGCCCAGCTCTGAGGGCCGGGGCATCAGGGGCATaGGTGGGATCAGCATGGCCATTGGCATCAGTGGCATCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GHGRGPALRAGASGA*VGSAWPLASVASAP Trigger: AGGAGCTGATGCCACTGATGCCAATGGCCATGCTGATCCCACTCATGCCCCTGATGCCCCGGCCCTCAGAGCTGGGCCACGTCCATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS GCA 90 bp | GAGTGGGCAGCCGCACACGGTGCAGGACGAACAGGCAGTAGGAAATaGCCAGTGTGTCCTGCAGGAGCCACGCCCAGCGGTCCTCATTGC | + |
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Preference number: 5 (lower is better) Translates to: EWAAAHGAGRTGSRK*PVCPAGATPSGPHC Trigger: GCAATGAGGACCGCTGGGCGTGGCTCCTGCAGGACACACTGGGCATTTCCTACTGCCTGTTCGTCCTGCACCGTGTGCGGCTGCCCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS TCA 90 bp | GGGCATGGACATGGCCCAGCTCTGAGGGCGGGGGCATCAGGGGCATaGGTGGGATCAGCATGGCCATTGGCATCAGTGGCATCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GHGHGPALRAGASGA*VGSAWPLASVASAP Trigger: AGGAGCTGATGCCACTGATGCCAATGGCCATGCTGATCCCACTCATGCCCCTGATGCCCCCGCCCTCAGAGCTGGGCCATGTCCATGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329196.7 ENST00000621383.2 |
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| CDS CCA 90 bp | GCCTGGGTCGACATGCTCTTTCTTACTTTCAAACCCTTCCTCTTGTaGAGTCCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: AWVDMLFLTFKPFLL*SPAQGRPVSWAWAW Trigger: CCAGGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAAGAGGAAGGGTTTGAAAGTAAGAAAGAGCATGTCGACCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329196.7 ENST00000621383.2 |
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| CDS TCA 90 bp | GCTGGCTGCACAGGGTCAAGGCGGAGACTCTTAGCCGGGGCACTTTaGGTACCATGGGCAGCCTCTCATGGCTTGAAGACTCTGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AGCTGSRRRLLAGAL*VPWAASHGLKTLQG Trigger: GCCCTGCAGAGTCTTCAAGCCATGAGAGGCTGCCCATGGTACTCAAAGTGCCCCGGCTAAGAGTCTCCGCCTTGACCCTGTGCAGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS GCA 90 bp | GATGAAGATGACCAGCATGTTGTAGTCGATGATGGGCTCTGGGGGTaGGTACATGGCCACGCGGACGACGGCCTCCCCACGAGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: DEDDQHVVVDDGLWG*VHGHADDGLPTSVA Trigger: AGCCACACTCGTGGGGAGGCCGTCGTCCGCGTGGCCATGTACGCACCCCCAGAGCCCATCATCGACTACAACATGCTGGTCATCTTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 90 bp | GGACAGGGTGACCACCACGCCTGTCATGGCCGGCGTGAAGTCCACTaGGATGTCCTCATTATCTTCCTTCTGGGCTCCCTCAGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GQGDHHACHGRREVH*DVLIIFLLGSLSCC Trigger: GCAGCAGCTGAGGGAGCCCAGAAGGAAGATAATGAGGACATCCCAGTGGACTTCACGCCGGCCATGACAGGCGTGGTGGTCACCCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 90 bp | GCCTGGGTCGACATGCTCTTTCTTACTTTCAAACCCTTCCTCTTGTaGAGTCCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: AWVDMLFLTFKPFLL*SPAQGRPVSWAWAW Trigger: CCAAGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAAGAGGAAGGGTTTGAAAGTAAGAAAGAGCATGTCGACCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS GCA 90 bp | GGCAGCCTCTCATGGCTTGAAGACTCTGCAGGGCCCAAGGCAACCTaGGCCATGATGCTCTCACCGGTTTTGGTGAAGAAGGGGGTGACG | + |
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Preference number: 5 (lower is better) Translates to: GSLSWLEDSAGPKAT*AMMLSPVLVKKGVT Trigger: CGTCACCCCCTTCTTCACCAAAACCGGTGAGAGCATCATGGCGCAGGTTGCCTTGGGCCCTGCAGAGTCTTCAAGCCATGAGAGGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 90 bp | AAGCAACCAGGAAGCCGGGGACCACAATGTCACCGAAGCCAAGGATaGAGAAGGGCTGGCTGCACAGGGTCAAGGCGGAGACTCTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: KQPGSRGPQCHRSQG*RRAGCTGSRRRLLA Trigger: GGCTAAGAGTCTCCGCCTTGACCCTGTGCAGCCAGCCCTTCTCCATCCTTGGCTTCGGTGACATTGTGGTCCCCGGCTTCCTGGTTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 90 bp | GAGACTCTTAGCCGGGGCACTTTGAGTACCATGGGCAGCCTCTCATaGCTTGAAGACTCTGCAGGGCCCAAGGCAACCTGCGCCATGATG | + |
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Preference number: 5 (lower is better) Translates to: ETLSRGTLSTMGSLS*LEDSAGPKATCAMM Trigger: CATCATGGCGCAGGTTGCCTTGGGCCCTGCAGAGTCTTCAAGCCATGAGAGGCTGCCCATGGTACTCAAAGTGCCCCGGCTAAGAGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 72 bp | CCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCTTaGGCATGGACGTGGCCCAGCTCTGAGGGCCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PAQGRPVSWAWA*AWTWPSSEGRG Trigger: GCCCCGGCCCTCAGAGCTGGGCCACGTCCATGCCCAAGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS CCA 72 bp | CCCCTCCTCTTCGGGCACGGCGCCGCTGTAGCCGGTTaGCTTCGGTCAGGCCGGCCCAGTAGCCGCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PLLFGHGAAVAG*LRSGRPSSRLQ Trigger: CTGCAGGCGGCTACTGGGCCGGCCTGACCGAAGCCAACCGGCTACAGCGGCGCCGTGCCCGAAGAGGAGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 72 bp | CAGGGCAGGCCAGTCTCGTGGGCCTGGGCTTGGGCATaGACGTGGCCCAGCTCTGAGGGCCGGGGCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: QGRPVSWAWAWA*TWPSSEGRGIR Trigger: CCTGATGCCCCGGCCCTCAGAGCTGGGCCACGTCCATGCCCAAGCCCAGGCCCACGAGACTGGCCTGCCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS CCA 72 bp | AGGCCAGTCTCGTGGGCCTGGGCTTGGGCATGGACGTaGCCCAGCTCTGAGGGCCGGGGCATCAGGGGCATG | + |
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Preference number: 6 (lower is better) Translates to: RPVSWAWAWAWT*PSSEGRGIRGM Trigger: CATGCCCCTGATGCCCCGGCCCTCAGAGCTGGGCCACGTCCATGCCCAAGCCCAGGCCCACGAGACTGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS CCA 72 bp | GCTCTGCCCTGGCCAGTCCAGAAGAGGCTGAGCTCTTaGCGGCAGGCAGCCACAGCCAGGCTGGTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ALPWPVQKRLSS*RQAATARLVSR Trigger: CCTGCTCACCAGCCTGGCTGTGGCTGCCTGCCGCCAAGAGCTCAGCCTCTTCTGGACTGGCCAGGGCAGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS TCA 72 bp | GCCAGCCTTTCGTGTGGAAGCTGCAGTTACCCCTCATaGCCATGGCAGTGGTCTGGCGGAGGGGCCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASLSCGSCSYPS*PWQWSGGGAAG Trigger: GCCAGCGGCCCCTCCGCCAGACCACTGCCATGGTCATGAGGGGTAACTGCAGCTTCCACACGAAAGGCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS TCA 72 bp | CGTGGCCCAGCTCTGAGGGCCGGGGCATCAGGGGCATaGGTGGGATCAGCATGGCCATTGGCATCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RGPALRAGASGA*VGSAWPLASVA Trigger: TGCCACTGATGCCAATGGCCATGCTGATCCCACTCATGCCCCTGATGCCCCGGCCCTCAGAGCTGGGCCACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS GCA 72 bp | GACCAGCATGTTGTAGTCGATGATGGGCTCTGGGGGTaGGTACATGGCCACGCGGACGACGGCCTCCCCACG | + |
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Preference number: 6 (lower is better) Translates to: DQHVVVDDGLWG*VHGHADDGLPT Trigger: CGTGGGGAGGCCGTCGTCCGCGTGGCCATGTACGCACCCCCAGAGCCCATCATCGACTACAACATGCTGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS GCA 72 bp | GCCGCACACGGTGCAGGACGAACAGGCAGTAGGAAATaGCCAGTGTGTCCTGCAGGAGCCACGCCCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: AAHGAGRTGSRK*PVCPAGATPSG Trigger: ACCGCTGGGCGTGGCTCCTGCAGGACACACTGGGCATTTCCTACTGCCTGTTCGTCCTGCACCGTGTGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 72 bp | GGGGCACAGCCGAGCCCACACATCTTAGCTCTGCCCTaGCCAGTCCAGAAGAGGCTGAGCTCTTGGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GAQPSPHILALP*PVQKRLSSWRQ Trigger: CTGCCGCCAAGAGCTCAGCCTCTTCTGGACTGGCCAGGGCAGAGCTAAGATGTGTGGGCTCGGCTGTGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS TCA 72 bp | CATGGCCCAGCTCTGAGGGCGGGGGCATCAGGGGCATaGGTGGGATCAGCATGGCCATTGGCATCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HGPALRAGASGA*VGSAWPLASVA Trigger: TGCCACTGATGCCAATGGCCATGCTGATCCCACTCATGCCCCTGATGCCCCCGCCCTCAGAGCTGGGCCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329196.7 ENST00000621383.2 |
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| CDS GCA 72 bp | CTCATTGCGGTAGGCCACCCAGAAGATGATCACGGTTaGGCACAGGCTCGCCAGCAGCAGCAGAGGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: LIAVGHPEDDHG*AQARQQQQRQR Trigger: CCGCTGCCTCTGCTGCTGCTGGCGAGCCTGTGCGCAACCGTGATCATCTTCTGGGTGGCCTACCGCAATGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329196.7 ENST00000621383.2 |
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| CDS CAA 90 bp | GGAGCCTGGGTCGACATGCTCTTTCTTACTTTCAAACCCTTCCTCTaGTGGAGTCCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GAWVDMLFLTFKPFL*WSPAQGRPVSWAWA Trigger: GGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAAGAGGAAGGGTTTGAAAGTAAGAAAGAGCATGTCGACCCAGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329196.7 ENST00000621383.2 |
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| CDS CAA 90 bp | GGCTGGCTGCACAGGGTCAAGGCGGAGACTCTTAGCCGGGGCACTTaGAGTACCATGGGCAGCCTCTCATGGCTTGAAGACTCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GWLHRVKAETLSRGT*STMGSLSWLEDSAG Trigger: CCCTGCAGAGTCTTCAAGCCATGAGAGGCTGCCCATGGTACTCAAAGTGCCCCGGCTAAGAGTCTCCGCCTTGACCCTGTGCAGCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CAA 90 bp | GGAGCCTGGGTCGACATGCTCTTTCTTACTTTCAAACCCTTCCTCTaGTGGAGTCCCGCCCAGGGCAGGCCAGTCTCGTGGGCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GAWVDMLFLTFKPFL*WSPAQGRPVSWAWA Trigger: AGCCCAGGCCCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAAGAGGAAGGGTTTGAAAGTAAGAAAGAGCATGTCGACCCAGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610319.2 |
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| CDS GCA 72 bp | AGGAAGCCCAGGCACGCCATCTTCTTCAGTTCCTACTaGAACATCTGCGGGCGGCAGCCCAATACCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RKPRHAIFFSSY*NICGRQPNTPP Trigger: GGGAGGGGTATTGGGCTGCCGCCCGCAGATGTTGCAGTAGGAACTGAAGAAGATGGCGTGCCTGGGCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 72 bp | GAAGATGACCAGCATGTTGTAGTCGATGATGGGCTCTaGGGGTGCGTACATGGCCACGCGGACGACGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: EDDQHVVVDDGL*GCVHGHADDGL Trigger: GAGGCCGTCGTCCGCGTGGCCATGTACGCACCCCCAGAGCCCATCATCGACTACAACATGCTGGTCATCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS TCA 72 bp | GGGCACTTTGAGTACCATGGGCAGCCTCTCATGGCTTaGAGACTCTGCAGGGCCCAAGGCAACCTGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GHFEYHGQPLMA*RLCRAQGNLRH Trigger: ATGGCGCAGGTTGCCTTGGGCCCTGCAGAGTCTTCAAGCCATGAGAGGCTGCCCATGGTACTCAAAGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CCA 72 bp | GACCACCACGCCTGTCATGGCCGGCGTGAAGTCCACTaGGATGTCCTCATTATCTTCCTTCTGGGCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: DHHACHGRREVH*DVLIIFLLGSL Trigger: GAGGGAGCCCAGAAGGAAGATAATGAGGACATCCCAGTGGACTTCACGCCGGCCATGACAGGCGTGGTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS TCA 72 bp | ACAGGGTCAAGGCGGAGACTCTTAGCCGGGGCACTTTaGGTACCATGGGCAGCCTCTCATGGCTTGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: TGSRRRLLAGAL*VPWAASHGLKT Trigger: AGTCTTCAAGCCATGAGAGGCTGCCCATGGTACTCAAAGTGCCCCGGCTAAGAGTCTCCGCCTTGACCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CAA 72 bp | GTCGACATGCTCTTTCTTACTTTCAAACCCTTCCTCTaGTGGAGTCCCGCCCAGGGCAGGCCAGTCTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: VDMLFLTFKPFL*WSPAQGRPVSW Trigger: CCACGAGACTGGCCTGCCCTGGGCGGGACTCCACAAGAGGAAGGGTTTGAAAGTAAGAAAGAGCATGTCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CAA 90 bp | TCTGCAGGGCCCAAGGCAACCTGCGCCATGATGCTCTCACCGGTTTaGGTGAAGAAGGGGGTGACGAAGACAAAGAAGACATCAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SAGPKATCAMMLSPV*VKKGVTKTKKTSKA Trigger: GGCCTTTGATGTCTTCTTTGTCTTCGTCACCCCCTTCTTCACCAAAACCGGTGAGAGCATCATGGCGCAGGTTGCCTTGGGCCCTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS GCA 72 bp | TCATGGCTTGAAGACTCTGCAGGGCCCAAGGCAACCTaGGCCATGATGCTCTCACCGGTTTTGGTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SWLEDSAGPKAT*AMMLSPVLVKK Trigger: CTTCTTCACCAAAACCGGTGAGAGCATCATGGCGCAGGTTGCCTTGGGCCCTGCAGAGTCTTCAAGCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CAA 72 bp | CCCAAGGCAACCTGCGCCATGATGCTCTCACCGGTTTaGGTGAAGAAGGGGGTGACGAAGACAAAGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: PKATCAMMLSPV*VKKGVTKTKKT Trigger: TGTCTTCTTTGTCTTCGTCACCCCCTTCTTCACCAAAACCGGTGAGAGCATCATGGCGCAGGTTGCCTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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| CDS CAA 90 bp | TCATTCTCAGATATGGTGACAATCTCAGTGGTGTCTTCTCCAGGGTaGCTGTCTAAGTCCCCTGCTCCTCGGCTGGTGCCTCTCTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SFSDMVTISVVSSPG*LSKSPAPRLVPLSS Trigger: ACTTGAGAGAGGCACCAGCCGAGGAGCAGGGGACTTAGACAGCAACCCTGGAGAAGACACCACTGAGATTGTCACCATATCTGAGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000329196.7 ENST00000610319.2 ENST00000621383.2 |
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