RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPON2 (Homo sapiens)

Ensembl gene IDs: ENSG00000159674

Ensembl transcript IDs: ENST00000290902.10, ENST00000400762.7, ENST00000431380.5, ENST00000502483.5, ENST00000502657.1, ENST00000503765.5, ENST00000504871.1, ENST00000504909.1, ENST00000505653.1, ENST00000506266.1, ENST00000507466.1, ENST00000509233.5, ENST00000509697.1, ENST00000510542.1, ENST00000511672.5, ENST00000511679.5, ENST00000512150.5, ENST00000512888.1, ENST00000514490.5, ENST00000515004.5, ENST00000515553.1, ENST00000617421.4

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCAATGCCCGTGCCGGCCACCAGAGGGCCCTTCAGTGCAGAGATaGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCC +
Preference number: 1 (lower is better)
Translates to: SQCPCRPPEGPSVQR*SARPHRGQEQRETP
Trigger: GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGGTGGCCGGCACGGGCATTGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR GCA 90 bp AGGCTGTTTCCCAATGCCCGTGCCGGCCACCAGAGGGCCCTTCAGTaGAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCG +
Preference number: 1 (lower is better)
Translates to: RLFPNARAGHQRALQ*RDGRRGLTAVRSSA
Trigger: CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGGTGGCCGGCACGGGCATTGGGAAACAGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR TCA 90 bp GCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTaGGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGAA +
Preference number: 1 (lower is better)
Translates to: APSGEWAQHSLEHQV*GICNHVGARPLDDE
Trigger: TTCATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR GCA 90 bp CGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATaGGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGT +
Preference number: 1 (lower is better)
Translates to: RNRPIYSLLKWPPLG*ALGRVGSAQPRAPG
Trigger: ACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR TCA 90 bp GATAGTCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTaGCGCTTCCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCC +
Preference number: 1 (lower is better)
Translates to: DSLYSNAERSITWKH*RFRNRPIYSLLKWP
Trigger: GGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAGTGCCCTCGGCCGCCTaGAGCATGAGCCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: PFSAEMVGAASPRSGAARVPSAA*SMSLHR
Trigger: CCTGTGCAGGCTCATGCTGCAGGCGGCCGAGGGCAC...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCAGCGCGAAACCCCCTGTaGCCTCGGCCGCCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAARNPL*PRPPAA
Trigger: TGCTGCAGGCGGCCGAGGGCACAGGGGGTTTCGCGC...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCAGTGCCCTCGGCCGCCTaGAGCATGAGCCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAVPSAA*SMSLHR
Trigger: CCTGTGCAGGCTCATGCTGCAGGCGGCCGAGGGCAC...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACAGAGGGCCCTTCAGTaGAGAGATGGTCGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAQRALQ*RDGRRG
Trigger: GCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTG...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCAGTTTCCCAATGCCCGTaGCGGCCACCAGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAVSQCP*RPPEGP
Trigger: AGGGCCCTCTGGTGGCCGGCACGGGCATTGGGAAAC...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCCTTCAGTGCAGAGATaGTCGGCGCGGCCTCACCGC +
Preference number: 2 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLEPSVQR*SARPHR
Trigger: GCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGG...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp AGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGCGCGAAACCCCCTGTaGCCTCGGCCGCCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: RLRADGTRGPLRSKVGKGARNPL*PRPPAA
Trigger: TGCTGCAGGCGGCCGAGGGCACAGGGGGTTTCGCGC...TCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp ACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGTGCCCTCGGCCGCCTaGAGCATGAGCCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: TAPFIHFSSGPRLDAPSGVPSAA*SMSLHR
Trigger: CCTGTGCAGGCTCATGCTGCAGGCGGCCGAGGGCAC...TCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp CAGCCTAGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGTTTCCCAATGCCCGTaGCGGCCACCAGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: QPRAPGLRYLQPRGSQAPVSQCP*RPPEGP
Trigger: AGGGCCCTCTGGTGGCCGGCACGGGCATTGGGAAAC...AGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGTGGGAGCCAGGCCCCTaGACGATGAAGGACAATCTC +
Preference number: 2 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLEWEPGP*TMKDNL
Trigger: GAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCA...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGGAGGCTGTTTCCCAATaGCCGTGCCGGCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: STRSEVSATTWEPGPWTMEAVSQ*PCRPPE
Trigger: CTCTGGTGGCCGGCACGGGCATTGGGAAACAGCCTC...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp AGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGACCTTCAGTGCAGAGATaGTCGGCGCGGCCTCACCGC +
Preference number: 2 (lower is better)
Translates to: RLRADGTRGPLRSKVGKGPSVQR*SARPHR
Trigger: GCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGG...TCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp ACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGTATCTGCAACCACGTaGGAGCCAGGCCCCTGGACG +
Preference number: 2 (lower is better)
Translates to: TAPFIHFSSGPRLDAPSGVSATT*EPGPWT
Trigger: CGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATAC...TCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR CAA 90 bp GCTTCCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTaGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: ASETAPFIHFSSGPR*DAPSGEWAQHSLEH
Trigger: GTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp GTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAATAACTGTTTCCCAATGCCCGTaGCGGCCACCAGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: VGARPLDDEGQSPGAAITVSQCP*RPPEGP
Trigger: AGGGCCCTCTGGTGGCCGGCACGGGCATTGGGAAAC...AGTTATTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR GCA 90 bp CCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTGAGGCTGTTTCCCAATaGCCGTGCCGGCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: PKPPHLFTSQVAPAWMRPEAVSQ*PCRPPE
Trigger: CTCTGGTGGCCGGCACGGGCATTGGGAAACAGCCTC...AGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCTAAGAAGCAAGGTTaGGAAAGGAGGAGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAPKKQG*ERRRLF
Trigger: AAACAGCCTCCTCCTTTCCCAACCTTGCTTCTTAGG...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR TCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTAGCAGGAGGAGGAGGCTaGGAGCAGACGGGACACGGG +
Preference number: 2 (lower is better)
Translates to: RREIHNMETLTLPKPPHLAGGGG*EQTGHG
Trigger: CCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTGC...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp TGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATCCTAAGAAGCAAGGTTaGGAAAGGAGGAGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: CALGRVGSAQPRAPGLRYPKKQG*ERRRLF
Trigger: AAACAGCCTCCTCCTTTCCCAACCTTGCTTCTTAGG...ATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTAGCGCCCTCGGGAGAGTaGGCTCAGCACAGCCTAGAG +
Preference number: 2 (lower is better)
Translates to: RREIHNMETLTLPKPPHLAPSGE*AQHSLE
Trigger: CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGC...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTAGTATCTGCAACCACGTaGGAGCCAGGCCCCTGGACG +
Preference number: 2 (lower is better)
Translates to: RREIHNMETLTLPKPPHLVSATT*EPGPWT
Trigger: CGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATAC...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR GCA 72 bp AGGAGCAGCGCGAAACCCCCTGTGCCCTCGGCCGCCTaGAGCATGAGCCTGCACAGGAGCCCCCGACACCCC +
Preference number: 3 (lower is better)
Translates to: RSSAKPPVPSAA*SMSLHRSPRHP
Trigger: GGGGTGTCGGGGGCTCCTGTGCAGGCTCATGCTGCAGGCGGCCGAGGGCACAGGGGGTTTCGCGCTGCTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR GCA 72 bp CCCAATGCCCGTGCCGGCCACCAGAGGGCCCTTCAGTaGAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGG +
Preference number: 3 (lower is better)
Translates to: PNARAGHQRALQ*RDGRRGLTAVR
Trigger: CCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGGTGGCCGGCACGGGCATTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR TCA 72 bp GGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTaGGGTATCTGCAACCACGTGGGAGCCAGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: GEWAQHSLEHQV*GICNHVGARPL
Trigger: CAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR CCA 72 bp CCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTaGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCC +
Preference number: 3 (lower is better)
Translates to: PPHLFTSQVAPA*MRPRESGLSTA
Trigger: GGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CAA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGAGAGTAGCTGGAGCCTaGGGGATGACTTTATCCTGC +
Preference number: 3 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLERVAGA*GMTLSC
Trigger: GCAGGATAAAGTCATCCCCAAGGCTCCAGCTACTCT...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR CCA 72 bp CGCTTCCGAAACCGCCCCATTTATTCACTTCTCAAGTaGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGC +
Preference number: 3 (lower is better)
Translates to: RFRNRPIYSLLK*PPLGCALGRVG
Trigger: GCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGGAAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR-3UTR CAA 90 bp CTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATCTGCAAAGAGTAGCTGGAGCCTaGGGGATGACTTTATCCTGC +
Preference number: 3 (lower is better)
Translates to: LGRVGSAQPRAPGLRYLQRVAGA*GMTLSC
Trigger: GCAGGATAAAGTCATCCCCAAGGCTCCAGCTACTCT...TTGCAGATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR TCA 72 bp TATTCAAACGCAGAGAGATCCATAACATGGAAACACTaGCGCTTCCGAAACCGCCCCATTTATTCACTTCTC +
Preference number: 3 (lower is better)
Translates to: YSNAERSITWKH*RFRNRPIYSLL
Trigger: GAGAAGTGAATAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCGCCTGCAGCATGAGCCTGCACAGGAGCCCCCGACACCCCATGGCTCCGGGGTCTGCCCGGTGCCGCTaGGGACGGCGGGCGCCGAAA +
Preference number: 4 (lower is better)
Translates to: AACSMSLHRSPRHPMAPGSARCR*GRRAPK
Trigger: TTTCGGCGCCCGCCGTCCCCAGCGGCACCGGGCAGA...CCCCGGAGCCATGGGGTGTCGGGGGCTCCTGTGCAGGCTCATGCTGCAGGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAGCTCCGCCGACGTCTaGCCGGTGCCGCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSASSADV*PVPLGT
Trigger: CGTCCCCAGCGGCACCGGGCAGACGTCGGCGGAGCT...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAGGGCGGCGGCCGGGCTaGGGTTTTCCATCACCCGGC +
Preference number: 4 (lower is better)
Translates to: PFSAEMVGAASPRSGAARGRRPG*GFPSPG
Trigger: GCCGGGTGATGGAAAACCCCAGCCCGGCCGCCGCCC...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCGCCTGCAGCATGAGCCTGCACAGGAGCCCCCGACACCCCATGGCTCCGGGGAGGGGCTCCCGTTGTTaGCGGGCTGGACCCGGACGT +
Preference number: 4 (lower is better)
Translates to: AACSMSLHRSPRHPMAPGRGSRC*RAGPGR
Trigger: ACGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCT...CCCCGGAGCCATGGGGTGTCGGGGGCTCCTGTGCAGGCTCATGCTGCAGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAGCGAGTGCCTGCGCTaGACCTCCAGCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSASECLR*TSSSAD
Trigger: GTCGGCGGAGCTGGAGGTGCAGCGCAGGCACTCGCT...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGCGAAACCCCCTGTaGCCTCGGCCGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RALQCRDGRRGLTAVRSSARNPL*PRPPAA
Trigger: TGCTGCAGGCGGCCGAGGGCACAGGGGGTTTCGCGC...GCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGTGTGGCCCCCGCTTGGATaGGCCCTCGGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RDGRRGLTAVRSSAKPPVWPPLG*ALGRVG
Trigger: GCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA...CACAGGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGTGTCTCCCCCAAGAGGCTaGCCGGCGGCGCCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RDGRRGLTAVRSSAKPPVSPPRG*PAAPRV
Trigger: CACTCTCGGCGCCGCCGGCCAGCCTCTTGGGGGAGA...CACAGGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCAGGGGCTCCCGTTGTTaGCGGGCTGGACCCGGACGT +
Preference number: 4 (lower is better)
Translates to: VQRWSARPHRGQEQRETPRGSRC*RAGPGR
Trigger: ACGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCT...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCGCCTGCAGCATGAGCCTGCACAGGAGCCCCCGACACCCCATGGCTCCGGGGCCTTCAGTGCAGAGATaGTCGGCGCGGCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: AACSMSLHRSPRHPMAPGPSVQR*SARPHR
Trigger: GCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGG...CCCCGGAGCCATGGGGTGTCGGGGGCTCCTGTGCAGGCTCATGCTGCAGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGATGGGGGAGGAGAAGGTaGAGCCGCTGTCCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PFSAEMVGAASPRSGAARWGRRR*SRCPSR
Trigger: CCGGGACGGACAGCGGCTTCACCTTCTCCTCCCCCA...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp CCAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGGCAGGAGGAGGAGGCTaGGAGCAGACGGGACACGGG +
Preference number: 4 (lower is better)
Translates to: PEGPSVQRWSARPHRGQEAGGGG*EQTGHG
Trigger: CCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTGC...CTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GCCGCCTGCAGCATGAGCCTGCACAGGAGCCCCCGACACCCCATGGCTCCGGGGCGGGGCTGGGCACGATaGGCACCACAAACGAGACCA +
Preference number: 4 (lower is better)
Translates to: AACSMSLHRSPRHPMAPGRGWAR*APQTRP
Trigger: TGGTCTCGTTTGTGGTGCGCATCGTGCCCAGCCCCG...CCCCGGAGCCATGGGGTGTCGGGGGCTCCTGTGCAGGCTCATGCTGCAGGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGCAGAGGGCCCTTCAGTaGAGAGATGGTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSAQRALQ*RDGRRG
Trigger: GCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTG...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGTCTCCCCCAAGAGGCTaGCCGGCGGCGCCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLESPPRG*PAAPRV
Trigger: CACTCTCGGCGCCGCCGGCCAGCCTCTTGGGGGAGA...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp GCCGCCTGCAGCATGAGCCTGCACAGGAGCCCCCGACACCCCATGGCTCCGGGGCAGGCCCCTGGACGATaGAGGACAATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AACSMSLHRSPRHPMAPGQAPGR*RTISWS
Trigger: GCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTG...CCCCGGAGCCATGGGGTGTCGGGGGCTCCTGTGCAGGCTCATGCTGCAGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAGACCAGCGAGTGCCTaGGCTGCACCTCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PFSAEMVGAASPRSGAARRPASA*AAPPAP
Trigger: CGGAGCTGGAGGTGCAGCGCAGGCACTCGCTGGTCT...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGCGGGGCTGGGCACGATaGGCACCACAAACGAGACCA +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSARGWAR*APQTRP
Trigger: TGGTCTCGTTTGTGGTGCGCATCGTGCCCAGCCCCG...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCGGACGTAGCGAGTCCTaGTCTTGGTCCCGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VQRWSARPHRGQEQRETPGRSES*SWSRAS
Trigger: GGAGGCTCGGGACCAAGAGCAGGACTCGCTACGTCC...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGGTGCCCTCGGCCGCCTaGAGCATGAGCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLEVPSAA*SMSLHR
Trigger: CCTGTGCAGGCTCATGCTGCAGGCGGCCGAGGGCAC...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGTGGTTTCCCAATGCCCGTaGCGGCCACCAGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RDGRRGLTAVRSSAKPPVVSQCP*RPPEGP
Trigger: AGGGCCCTCTGGTGGCCGGCACGGGCATTGGGAAAC...CACAGGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGGAGGCTGTTTCCCAATaGCCGTGCCGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSAEAVSQ*PCRPPE
Trigger: CTCTGGTGGCCGGCACGGGCATTGGGAAACAGCCTC...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CCAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCCGTGTCCTGCGGGATaGTGGCGAAGTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PEGPSVQRWSARPHRGQEPCPAG*WRSWGR
Trigger: CCTCCCCCAACTTCGCCACCATCCCGCAGGACACGG...CTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGTGGCACCAGTGTCACCCTaGCGATGGGAGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RDGRRGLTAVRSSAKPPVAPVSP*RWEAGP
Trigger: AGGCCCTGCCTCCCATCGCCAGGGTGACACTGGTGC...CACAGGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCGAGCCTCCCACAGTaGCCTCCGCACAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAPSLPQ*PPHSPQ
Trigger: CTGGGGACTGTGCGGAGGCCACTGTGGGAGGCTCGG...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGGTATCTGCAACCACGTaGGAGCCAGGCCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSAVSATT*EPGPWT
Trigger: CGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATAC...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CCAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGGCGCCCTCGGGAGAGTaGGCTCAGCACAGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PEGPSVQRWSARPHRGQEAPSGE*AQHSLE
Trigger: CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGC...CTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CCAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAAGTGGCCCCCGCTTaGATGCGCCCTCGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: PEGPSVQRWSARPHRGQEQVAPA*MRPRES
Trigger: ACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTG...CTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCAGCCGAAAACACCGCGTaGACGCTCTGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAAENTA*TLCSAS
Trigger: GGAGGCGCTGCAGAGCGTGCACGCGGTGTTTTCGGC...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGAGACCAGCGAGTGCCTaGGCTGCACCTCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLERPASA*AAPPAP
Trigger: CGGAGCTGGAGGTGCAGCGCAGGCACTCGCTGGTCT...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACGAGACCAGCGAGTaGCTGCGCTGCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PFSAEMVGAASPRSGAARNETSE*LRCTSS
Trigger: GCTGGAGGTGCAGCGCAGGCACTCGCTGGTCTCGTT...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGGGGCGGCGGCCGGGCTaGGGTTTTCCATCACCCGGC +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMGRRPG*GFPSPG
Trigger: GCCGGGTGATGGAAAACCCCAGCCCGGCCGCCGCCC...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGCGGCGGCGCCGAGAGTaGCCAGGAGGAGAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: LGCALGRVGSAQPRAPGLRRRRE*PGGERR
Trigger: TCTGCGCTCTCCTCCTGGCCACTCTCGGCGCCGCCG...CAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTTGGGGAAGGCCGTCTaGCTCCACTTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: VQRWSARPHRGQEQRETPLGKAV*LHLPVK
Trigger: CTTCACGGGCAAGTGGAGCCAGACGGCCTTCCCCAA...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGTCCTGCGGGATGGTaGCGAAGTTGGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VQRWSARPHRGQEQRETPCPAGW*RSWGRR
Trigger: TCTCCTCCCCCAACTTCGCCACCATCCCGCAGGACA...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAGCGAGTCCTGCTCTTaGTCCCGAGCCTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSASESCS*SRASHS
Trigger: ACTGTGGGAGGCTCGGGACCAAGAGCAGGACTCGCT...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp CCAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGGCCCCTGGACGATaGAGGACAATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PEGPSVQRWSARPHRGQEQAPGR*RTISWS
Trigger: GCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTG...CTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp ACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAAGCTCCGCCGACGTCTaGCCGGTGCCGCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: TAPFIHFSSGPRLDAPSGSSADV*PVPLGT
Trigger: CGTCCCCAGCGGCACCGGGCAGACGTCGGCGGAGCT...TCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCGGGGCTGGGCACGATaGGCACCACAAACGAGACCA +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLERGWAR*APQTRP
Trigger: TGGTCTCGTTTGTGGTGCGCATCGTGCCCAGCCCCG...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTTGGCCCCCGCTTGGATaGGCCCTCGGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVWPPLG*ALGRVG
Trigger: GCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGAACGGTCTGTCCGTCTaGTGTCCGAGCTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLENGLSV*CPSSGA
Trigger: GGCCCCTGAGCTCGGACAGCAGACGGACAGACCGTT...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCAGGACTCTGGCCACGGTaGCAACGCGTCAACGGTCTG +
Preference number: 4 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAGLWPR*QRVNGL
Trigger: CAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCC...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp CAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCCTTGGAGGATGTGCCTaGCGCGTTCTCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QRALQCRDGRRGLTAVRSLGGCA*RVLSPL
Trigger: GAGAGGGCTGAGAACGCGGCAGGCACATCCTCCAAG...GCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp ATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCGGCGGCGCCGAGAGTaGCCAGGAGGAGAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: IHFSSGPRLDAPSGEWAQRRRRE*PGGERR
Trigger: TCTGCGCTCTCCTCCTGGCCACTCTCGGCGCCGCCG...CTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACGAACCAGTCGGGGCTaGGCACGATGCGCACCACAA +
Preference number: 4 (lower is better)
Translates to: WPPLGCALGRVGSAQPRARTSRG*ARCAPQ
Trigger: TTGTGGTGCGCATCGTGCCCAGCCCCGACTGGTTCG...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CCAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGTGTCCTGCGGGATGGTaGCGAAGTTGGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PEGPSVQRWSARPHRGQECPAGW*RSWGRR
Trigger: TCTCCTCCCCCAACTTCGCCACCATCCCGCAGGACA...CTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCTGTCCTGCGGGATGGTaGCGAAGTTGGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RALQCRDGRRGLTAVRSSCPAGW*RSWGRR
Trigger: TCTCCTCCCCCAACTTCGCCACCATCCCGCAGGACA...GCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGTCTCATTGTCCCTGCTaGGCAGGACTGGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLESHCPC*AGLGRE
Trigger: CTCCCGCCCCAGTCCTGCCCAGCAGGGACAATGAGA...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGCCGAGCCTCCCACAGTaGCCTCCGCACAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGCALGRVGSAQPRAPGLPSLPQ*PPHSPQ
Trigger: CTGGGGACTGTGCGGAGGCCACTGTGGGAGGCTCGG...CAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CAGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTCCGAGCCTCCCACAGTaGCCTCCGCACAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QEEEAESRRDTGAPKKQGPSLPQ*PPHSPQ
Trigger: CTGGGGACTGTGCGGAGGCCACTGTGGGAGGCTCGG...ACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGAGTCCTGCTCTTaGTCCCGAGCCTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: QRALQCRDGRRGLTAVRSSESCS*SRASHS
Trigger: ACTGTGGGAGGCTCGGGACCAAGAGCAGGACTCGCT...GCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGTGGGAGCCAGGCCCCTaGACGATGAAGGACAATCTC +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSAWEPGP*TMKDNL
Trigger: GAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCA...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGGGAGCCAGGCCCCTaGACGATGAAGGACAATCTC +
Preference number: 4 (lower is better)
Translates to: VQRWSARPHRGQEQRETPWEPGP*TMKDNL
Trigger: GAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCA...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCCGGCGTTTCTGGAACTaGGGCGCTGTCTACAATCTC +
Preference number: 4 (lower is better)
Translates to: VQRWSARPHRGQEQRETPRRFWN*GAVYNL
Trigger: GAGATTGTAGACAGCGCCTCAGTTCCAGAAACGCCG...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGCTAGAGCACCAGGTCTaGGGTATCTGCAACCACGTG +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSALEHQV*GICNHV
Trigger: CACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAG...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTCCCCGGGCCGGCCAATaGGGCTCCAGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVPRAGQ*GSSSSC
Trigger: ACAGGAGGAACTGGAGCCTCATTGGCCGGCCCGGGG...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGCCCCGGGCCGGCCAATaGGGCTCCAGTTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMPRAGQ*GSSSSC
Trigger: ACAGGAGGAACTGGAGCCTCATTGGCCGGCCCGGGG...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTAGCGAGTGCCTGCGCTaGACCTCCAGCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVSECLR*TSSSAD
Trigger: GTCGGCGGAGCTGGAGGTGCAGCGCAGGCACTCGCT...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGTGCCCTCGGCCGCCTaGAGCATGAGCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVVPSAA*SMSLHR
Trigger: CCTGTGCAGGCTCATGCTGCAGGCGGCCGAGGGCAC...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGCAGAGGGCCCTTCAGTaGAGAGATGGTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LGCALGRVGSAQPRAPGLQRALQ*RDGRRG
Trigger: GCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTG...CAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGATCTCCCCCAAGAGGCTaGCCGGCGGCGCCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RLRADGTRGPLRSKVGKGSPPRG*PAAPRV
Trigger: CACTCTCGGCGCCGCCGGCCAGCCTCTTGGGGGAGA...TCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CCAGAGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCTCTGGCGGAACAGATaGACTCTCCCCCAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PEGPSVQRWSARPHRGQELWRNR*TLPQEA
Trigger: AGCCTCTTGGGGGAGAGTCCATCTGTTCCGCCAGAG...CTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGATTTGGCCAGGGCTCTaGCGGAACAGATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSAIWPGL*RNRWTL
Trigger: GAGAGTCCATCTGTTCCGCCAGAGCCCTGGCCAAAT...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTTCTGCCCGGTGCCGCTaGGGACGGCGGGCGCCGAAA +
Preference number: 4 (lower is better)
Translates to: PKPPHLFTSQVAPAWMRPSARCR*GRRAPK
Trigger: TTTCGGCGCCCGCCGTCCCCAGCGGCACCGGGCAGA...AGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGCCGTGTCCTGCGGGATaGTGGCGAAGTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGCALGRVGSAQPRAPGLPCPAG*WRSWGR
Trigger: CCTCCCCCAACTTCGCCACCATCCCGCAGGACACGG...CAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGTGAGTTGGCCGGGTGGCTaGGAGAGGAGGACGTTATCT +
Preference number: 4 (lower is better)
Translates to: RDGRRGLTAVRSSAKPPVSWPGG*ERRTLS
Trigger: AGATAACGTCCTCCTCTCCCAGCCACCCGGCCAACT...CACAGGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCATAACATGGAAACACTaGCGCTTCCGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: VQRWSARPHRGQEQRETPITWKH*RFRNRP
Trigger: GGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTAT...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp CAGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTTCTTGCGCAGGGTGTaGCCTGGAGAGCCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: QEEEAESRRDTGAPKKQGFLRRV*PGEPCA
Trigger: CGCACAGGGCTCTCCAGGTCACACCCTGCGCAAGAA...ACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR GCA 90 bp AGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAAGCGAGTGCCTGCGCTaGACCTCCAGCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: RLRADGTRGPLRSKVGKGSECLR*TSSSAD
Trigger: GTCGGCGGAGCTGGAGGTGCAGCGCAGGCACTCGCT...TCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAACGAGACCAGCGAGTaGCTGCGCTGCACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGCALGRVGSAQPRAPGLNETSE*LRCTSS
Trigger: GCTGGAGGTGCAGCGCAGGCACTCGCTGGTCTCGTT...CAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp TGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATCAGAGGGCCCTTCAGTaGAGAGATGGTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: CALGRVGSAQPRAPGLRYQRALQ*RDGRRG
Trigger: GCCGCGCCGACCATCTCTGCACTGAAGGGCCCTCTG...ATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp ATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGGTTTCCCAATGCCCGTaGCGGCCACCAGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: IHFSSGPRLDAPSGEWAQVSQCP*RPPEGP
Trigger: AGGGCCCTCTGGTGGCCGGCACGGGCATTGGGAAAC...CTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CAGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTCTCAGGGGCCGTCCATaGCTCCACGGCTGGCATACA +
Preference number: 4 (lower is better)
Translates to: QEEEAESRRDTGAPKKQGLRGRP*LHGWHT
Trigger: TGTATGCCAGCCGTGGAGGCATGGACGGCCCCTGAG...ACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAATAACTGGGCGGCGGCCGGGCTaGGGTTTTCCATCACCCGGC +
Preference number: 4 (lower is better)
Translates to: VGARPLDDEGQSPGAAITGRRPG*GFPSPG
Trigger: GCCGGGTGATGGAAAACCCCAGCCCGGCCGCCGCCC...AGTTATTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGGGCACCAGTGTCACCCTaGCGATGGGAGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AESRRDTGAPKKQGWERRAPVSP*RWEAGP
Trigger: AGGCCCTGCCTCCCATCGCCAGGGTGACACTGGTGC...CCTCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp ACCACGTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAAAGGGGCTCCCGTTGTTaGCGGGCTGGACCCGGACGT +
Preference number: 4 (lower is better)
Translates to: TTWEPGPWTMKDNLLEQQRGSRC*RAGPGR
Trigger: ACGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCT...TTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCACGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp ATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCCTTCAGTGCAGAGATaGTCGGCGCGGCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: IHFSSGPRLDAPSGEWAQPSVQR*SARPHR
Trigger: GCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGG...CTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGCGCCCTCGGGAGAGTaGGCTCAGCACAGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVAPSGE*AQHSLE
Trigger: CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGC...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGGCAAGTGGCCCCCGCTTaGATGCGCCCTCGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AESRRDTGAPKKQGWERRQVAPA*MRPRES
Trigger: ACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTG...CCTCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGGAGAGCCCTGTGCGTaGCCTGACTTCAGTCTACAT +
Preference number: 4 (lower is better)
Translates to: RALQCRDGRRGLTAVRSSGEPCA*PDFSLH
Trigger: ATGTAGACTGAAGTCAGGCCACGCACAGGGCTCTCC...GCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR TCA 90 bp CCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTGCAGGAGGAGGAGGCTaGGAGCAGACGGGACACGGG +
Preference number: 4 (lower is better)
Translates to: PKPPHLFTSQVAPAWMRPAGGGG*EQTGHG
Trigger: CCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTGC...AGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGGCAGGAGGAGGAGGCTaGGAGCAGACGGGACACGGG +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGAGGGG*EQTGHG
Trigger: CCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTGC...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGTCTTCCTCCAAGCAGTaGGGAAACCAAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLESSSKQ*GNQGLE
Trigger: CTCCAGGCCTTGGTTTCCTCACTGCTTGGAGGAAGA...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAGGTTCTTCCTCCACATaGTGTAGTCGGAGCTATGCG +
Preference number: 4 (lower is better)
Translates to: PFSAEMVGAASPRSGAARGSSST*CSRSYA
Trigger: CGCATAGCTCCGACTACAGCATGTGGAGGAAGAACC...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp GCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGGGGACGTAGCGAGTCCTaGTCTTGGTCCCGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AESRRDTGAPKKQGWERRGRSES*SWSRAS
Trigger: GGAGGCTCGGGACCAAGAGCAGGACTCGCTACGTCC...CCTCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp AGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGAGGACGTAGCGAGTCCTaGTCTTGGTCCCGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAPGLRYLQPRGSQAPGRGRSES*SWSRAS
Trigger: GGAGGCTCGGGACCAAGAGCAGGACTCGCTACGTCC...TCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp TGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATGAGGCTGTTTCCCAATaGCCGTGCCGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: CALGRVGSAQPRAPGLRYEAVSQ*PCRPPE
Trigger: CTCTGGTGGCCGGCACGGGCATTGGGAAACAGCCTC...ATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCAATTTGGCCAGGGCTCTaGCGGAACAGATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAIWPGL*RNRWTL
Trigger: GAGAGTCCATCTGTTCCGCCAGAGCCCTGGCCAAAT...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGAACAGGGGGTACTGCTTaGGGAAGGCCGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RAPGLRYLQPRGSQAPGRTGGTA*GRPSGS
Trigger: GGAGCCAGACGGCCTTCCCCAAGCAGTACCCCCTGT...TCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp TGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATCGAACCAGTCGGGGCTaGGCACGATGCGCACCACAA +
Preference number: 4 (lower is better)
Translates to: CALGRVGSAQPRAPGLRYRTSRG*ARCAPQ
Trigger: TTGTGGTGCGCATCGTGCCCAGCCCCGACTGGTTCG...ATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAAGGAGTTGGCCGGGTaGCTGGGAGAGGAGGACGTT +
Preference number: 4 (lower is better)
Translates to: LGCALGRVGSAQPRAPGLKELAG*LGEEDV
Trigger: AACGTCCTCCTCTCCCAGCCACCCGGCCAACTCCTT...CAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGTATTCACTTCTCAAGTaGCCCCCGCTTGGATGCGCC +
Preference number: 4 (lower is better)
Translates to: SGPRLDAPSGEWAQHSLEYSLLK*PPLGCA
Trigger: GGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATA...CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp ATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGTTCCAGCAGGGCCCTTaGAGGATGTGCCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: IHFSSGPRLDAPSGEWAQFQQGP*RMCLPR
Trigger: ACGCGGCAGGCACATCCTCCAAGGGCCCTGCTGGAA...CTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGACTTCAGTCTACATGCTaGAAGTGGCTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PFSAEMVGAASPRSGAARLQSTC*KWLGKL
Trigger: GAGCTTCCCCAGCCACTTCCAGCATGTAGACTGAAG...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR TCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTCGCGCAGCCCGTTACTaGCGTACTGGTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVRAARY*RTGSSS
Trigger: GGAGGAAGAACCAGTACGTCAGTAACGGGCTGCGCG...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGCGCGCAGCCCGTTACTaGCGTACTGGTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMRAARY*RTGSSS
Trigger: GGAGGAAGAACCAGTACGTCAGTAACGGGCTGCGCG...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGCAGGCCCCTGGACGATaGAGGACAATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMQAPGR*RTISWS
Trigger: GCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTG...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp CAGCCTAGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGCCCTGTGCGTGGCCTaGCTTCAGTCTACATGCTGG +
Preference number: 4 (lower is better)
Translates to: QPRAPGLRYLQPRGSQAPALCVA*LQSTCW
Trigger: CCAGCATGTAGACTGAAGTCAGGCCACGCACAGGGC...AGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR GCA 90 bp CCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTAGACCAGCGAGTGCCTaGGCTGCACCTCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PKPPHLFTSQVAPAWMRPRPASA*AAPPAP
Trigger: CGGAGCTGGAGGTGCAGCGCAGGCACTCGCTGGTCT...AGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTGTTTCCCAATGCCCGTaGCGGCCACCAGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PKPPHLFTSQVAPAWMRPVSQCP*RPPEGP
Trigger: AGGGCCCTCTGGTGGCCGGCACGGGCATTGGGAAAC...AGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp ACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGGCTGTTTCCCAATaGCCGTGCCGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: TAPFIHFSSGPRLDAPSGEAVSQ*PCRPPE
Trigger: CTCTGGTGGCCGGCACGGGCATTGGGAAACAGCCTC...TCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTTTGGGGAAGGCCGTCTaGCTCCACTTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVLGKAV*LHLPVK
Trigger: CTTCACGGGCAAGTGGAGCCAGACGGCCTTCCCCAA...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CAGCCTAGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTAAGGAGTTGGCCGGGTaGCTGGGAGAGGAGGACGTT +
Preference number: 4 (lower is better)
Translates to: QPRAPGLRYLQPRGSQAPKELAG*LGEEDV
Trigger: AACGTCCTCCTCTCCCAGCCACCCGGCCAACTCCTT...AGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CAGCCTAGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTAGCGAGTCCTGCTCTTaGTCCCGAGCCTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: QPRAPGLRYLQPRGSQAPSESCS*SRASHS
Trigger: ACTGTGGGAGGCTCGGGACCAAGAGCAGGACTCGCT...AGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGCCTAAGAAGCAAGGTTaGGAAAGGAGGAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: ALQCRDGRRGLTAVRSSAPKKQG*ERRRLF
Trigger: AAACAGCCTCCTCCTTTCCCAACCTTGCTTCTTAGG...CGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
3UTR CAA 72 bp ACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTaGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: TAPFIHFSSGPR*DAPSGEWAQHS
Trigger: GCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGGAAGCCCAGCACCCGTaGCCTCGATCACATCGCCAG +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGEAQHP*PRSHRQ
Trigger: CTGGCGATGTGATCGAGGGCACGGGTGCTGGGCTTC...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGCGTGCTACACCTTCTTaGGCAGGGTGTGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMRATPS*AGCDLE
Trigger: CTCCAGGTCACACCCTGCGCAAGAAGGTGTAGCACG...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR CCA 90 bp AGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGACTCTGGCGGAACAGATaGACTCTCCCCCAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RAPGLRYLQPRGSQAPGRLWRNR*TLPQEA
Trigger: AGCCTCTTGGGGGAGAGTCCATCTGTTCCGCCAGAG...TCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGACAGGGGGTACTGCTTaGGGAAGGCCGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGTGGTA*GRPSGS
Trigger: GGAGCCAGACGGCCTTCCCCAAGCAGTACCCCCTGT...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CTGACGCTTCCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGGCACCAGTGTCACCCTaGCGATGGGAGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LTLPKPPHLFTSQVAPAWAPVSP*RWEAGP
Trigger: AGGCCCTGCCTCCCATCGCCAGGGTGACACTGGTGC...CCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGGAAGCGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGTCTCATTGTCCCTGCTaGGCAGGACTGGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGSHCPC*AGLGRE
Trigger: CTCCCGCCCCAGTCCTGCCCAGCAGGGACAATGAGA...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGGGAGCCAGGCCCCTaGACGATGAAGGACAATCTC +
Preference number: 4 (lower is better)
Translates to: RAPGLRYLQPRGSQAPGRWEPGP*TMKDNL
Trigger: GAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCA...TCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATCTGCAAGTATCTGCAACCACGTaGGAGCCAGGCCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: LGRVGSAQPRAPGLRYLQVSATT*EPGPWT
Trigger: CGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATAC...TTGCAGATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAATAACTCAAGTGGCCCCCGCTTaGATGCGCCCTCGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: VGARPLDDEGQSPGAAITQVAPA*MRPRES
Trigger: ACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTG...AGTTATTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp ATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCGGCGTTTCTGGAACTaGGGCGCTGTCTACAATCTC +
Preference number: 4 (lower is better)
Translates to: IHFSSGPRLDAPSGEWAQRRFWN*GAVYNL
Trigger: GAGATTGTAGACAGCGCCTCAGTTCCAGAAACGCCG...CTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGCGGCGTTTCTGGAACTaGGGCGCTGTCTACAATCTC +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMRRFWN*GAVYNL
Trigger: GAGATTGTAGACAGCGCCTCAGTTCCAGAAACGCCG...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp ATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCTAGAGCACCAGGTCTaGGGTATCTGCAACCACGTG +
Preference number: 4 (lower is better)
Translates to: IHFSSGPRLDAPSGEWAQLEHQV*GICNHV
Trigger: CACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAG...CTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTCTAGAGCACCAGGTCTaGGGTATCTGCAACCACGTG +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVLEHQV*GICNHV
Trigger: CACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAG...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp CAGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTATAACATGGAAACACTaGCGCTTCCGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: QEEEAESRRDTGAPKKQGITWKH*RFRNRP
Trigger: GGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTAT...ACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACAGCATAAGGACCTCTaGGAATTCTCATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: WPPLGCALGRVGSAQPRAQHKDL*EFSSSS
Trigger: GGAGGAAGATGAGAATTCTCAGAGGTCCTTATGCTG...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCATCCTGTCTTCGATGCTaGACGGCCTTCTCGAAATTA +
Preference number: 4 (lower is better)
Translates to: WPPLGCALGRVGSAQPRASCLRC*TAFSKL
Trigger: TAATTTCGAGAAGGCCGTGCAGCATCGAAGACAGGA...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR GCA 90 bp GCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGGTCCTCCTGTCTTCGATaGTGCACGGCCTGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: AESRRDTGAPKKQGWERRSSCLR*CTAWPF
Trigger: AAAAGGCCAGGCCGTGCAGCATCGAAGACAGGAGGA...CCTCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp GCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGGATTTGGCCAGGGCTCTaGCGGAACAGATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: AESRRDTGAPKKQGWERRIWPGL*RNRWTL
Trigger: GAGAGTCCATCTGTTCCGCCAGAGCCCTGGCCAAAT...CCTCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGTTGGGGAAGGCCGTCTaGCTCCACTTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGLGKAV*LHLPVK
Trigger: CTTCACGGGCAAGTGGAGCCAGACGGCCTTCCCCAA...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTATCTGCCCGGTGCCGCTaGGGACGGCGGGCGCCGAAA +
Preference number: 4 (lower is better)
Translates to: RREIHNMETLTLPKPPHLSARCR*GRRAPK
Trigger: TTTCGGCGCCCGCCGTCCCCAGCGGCACCGGGCAGA...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp ACCACGTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAAAGTTGGCCGGGTGGCTaGGAGAGGAGGACGTTATCT +
Preference number: 4 (lower is better)
Translates to: TTWEPGPWTMKDNLLEQQSWPGG*ERRTLS
Trigger: AGATAACGTCCTCCTCTCCCAGCCACCCGGCCAACT...TTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCACGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAATAACTGTATCTGCAACCACGTaGGAGCCAGGCCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: VGARPLDDEGQSPGAAITVSATT*EPGPWT
Trigger: CGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATAC...AGTTATTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGTATTCACTTCTCAAGTaGCCCCCGCTTGGATGCGCC +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMYSLLK*PPLGCA
Trigger: GGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATA...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGATTCTTGAACGGACTCTaGCCACGGTGCCAACGCGTC +
Preference number: 4 (lower is better)
Translates to: RLRADGTRGPLRSKVGKGFLNGL*PRCQRV
Trigger: GACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAA...TCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR TCA 90 bp GTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAATAACTCGCGCAGCCCGTTACTaGCGTACTGGTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGARPLDDEGQSPGAAITRAARY*RTGSSS
Trigger: GGAGGAAGAACCAGTACGTCAGTAACGGGCTGCGCG...AGTTATTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTAGCGCGAAACCCCCTGTaGCCTCGGCCGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RREIHNMETLTLPKPPHLARNPL*PRPPAA
Trigger: TGCTGCAGGCGGCCGAGGGCACAGGGGGTTTCGCGC...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTATGGCCCCCGCTTGGATaGGCCCTCGGGAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RREIHNMETLTLPKPPHLWPPLG*ALGRVG
Trigger: GCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CAGCCTAGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGTTCTCAGCCCTCTCTaGCGACCTTTCTTGAACGGA +
Preference number: 4 (lower is better)
Translates to: QPRAPGLRYLQPRGSQAPVLSPL*RPFLNG
Trigger: TCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAGAAC...AGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp GCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGGTCCTCCTGTCTTCGATaGTGCACGGCCTTCTCGAAA +
Preference number: 4 (lower is better)
Translates to: AESRRDTGAPKKQGWERRSSCLR*CTAFSK
Trigger: TTTCGAGAAGGCCGTGCAGCATCGAAGACAGGAGGA...CCTCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR CCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGAGTTGGCCGGGTGGCTaGGAGAGGAGGACGTTATCT +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGSWPGG*ERRTLS
Trigger: AGATAACGTCCTCCTCTCCCAGCCACCCGGCCAACT...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp ACCACGTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAAATAACATGGAAACACTaGCGCTTCCGAAACCGCCCC +
Preference number: 4 (lower is better)
Translates to: TTWEPGPWTMKDNLLEQQITWKH*RFRNRP
Trigger: GGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTAT...TTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCACGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp ACCACGTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAAGGTTCTTCCTCCACATaGTGTAGTCGGAGCTATGCG +
Preference number: 4 (lower is better)
Translates to: TTWEPGPWTMKDNLLEQQGSSST*CSRSYA
Trigger: CGCATAGCTCCGACTACAGCATGTGGAGGAAGAACC...TTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCACGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGATGCCGTTACTGACGTACTaGTTCTTCCTCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: STRSEVSATTWEPGPWTMPLLTY*FFLHML
Trigger: CAGCATGTGGAGGAAGAACCAGTACGTCAGTAACGG...CATCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTCCGTTACTGACGTACTaGTTCTTCCTCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVPLLTY*FFLHML
Trigger: CAGCATGTGGAGGAAGAACCAGTACGTCAGTAACGG...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGGAGGAAACCAAGGCCTaGAGAATCACCGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGEETKA*RITASS
Trigger: GGAGGAAGCGGTGATTCTCCAGGCCTTGGTTTCCTC...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp CTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATCTGCAAGGTTCTTCCTCCACATaGTGTAGTCGGAGCTATGCG +
Preference number: 4 (lower is better)
Translates to: LGRVGSAQPRAPGLRYLQGSSST*CSRSYA
Trigger: CGCATAGCTCCGACTACAGCATGTGGAGGAAGAACC...TTGCAGATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTAGGCCCTTGGAGGATGTaGCTGCCGCGTTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RREIHNMETLTLPKPPHLGPWRM*LPRSQP
Trigger: GGGCTGAGAACGCGGCAGGCACATCCTCCAAGGGCC...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR GCA 90 bp AGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAAAATTAGAGCCAGCGTaGTACACCTTCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RLRADGTRGPLRSKVGKGKLEPA*YTFLRR
Trigger: CCTGCGCAAGAAGGTGTAGCACGCTGGCTCTAATTT...TCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431380.5
CDS-3UTR GCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGTCCTGTCTTCGATGCTaGACGGCCTGGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGSCLRC*TAWPFS
Trigger: AGAAAAAGGCCAGGCCGTGCAGCATCGAAGACAGGA...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp GCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTGGGAAAGGAGGCCTAAGAAGCAAGGTTaGGAAAGGAGGAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AESRRDTGAPKKQGWERRPKKQG*ERRRLF
Trigger: AAACAGCCTCCTCCTTTCCCAACCTTGCTTCTTAGG...CCTCCTTTCCCAACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp GTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAATAACTTATTCACTTCTCAAGTaGCCCCCGCTTGGATGCGCC +
Preference number: 4 (lower is better)
Translates to: VGARPLDDEGQSPGAAITYSLLK*PPLGCA
Trigger: GGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATA...AGTTATTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CTGACGCTTCCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGCCATGCCTCCACGGCTaGCATACAGTAGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LTLPKPPHLFTSQVAPAWPCLHG*HTVALV
Trigger: AACCAGAGCTACTGTATGCCAGCCGTGGAGGCATGG...CCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGGAAGCGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp CATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCCGTTACTGACGTACTaGTTCTTCCTCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: HLFTSQVAPAWMRPRESGPLLTY*FFLHML
Trigger: CAGCATGTGGAGGAAGAACCAGTACGTCAGTAACGG...CCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTACGAACCAGTCGGGGCTaGGCACGATGCGCACCACAA +
Preference number: 4 (lower is better)
Translates to: RREIHNMETLTLPKPPHLRTSRG*ARCAPQ
Trigger: TTGTGGTGCGCATCGTGCCCAGCCCCGACTGGTTCG...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp ACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGACCTAAGAAGCAAGGTTaGGAAAGGAGGAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TAPFIHFSSGPRLDAPSGPKKQG*ERRRLF
Trigger: AAACAGCCTCCTCCTTTCCCAACCTTGCTTCTTAGG...TCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAAAGCTCCGCCGACGTCTaGCCGGTGCCGCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKSSADV*PVPLGT
Trigger: CGTCCCCAGCGGCACCGGGCAGACGTCGGCGGAGCT...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTACTCTGGCGGAACAGATaGACTCTCCCCCAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RREIHNMETLTLPKPPHLLWRNR*TLPQEA
Trigger: AGCCTCTTGGGGGAGAGTCCATCTGTTCCGCCAGAG...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAATGGGGGAGGAGAAGGTaGAGCCGCTGTCCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKWGRRR*SRCPSR
Trigger: CCGGGACGGACAGCGGCTTCACCTTCTCCTCCCCCA...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAAGTGCCCTCGGCCGCCTaGAGCATGAGCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKVPSAA*SMSLHR
Trigger: CCTGTGCAGGCTCATGCTGCAGGCGGCCGAGGGCAC...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAAGCCGAAAACACCGCGTaGACGCTCTGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKAENTA*TLCSAS
Trigger: GGAGGCGCTGCAGAGCGTGCACGCGGTGTTTTCGGC...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp CCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTTTAAGATGTCAAGACTaGAGCAAAAAGGGCAGCATA +
Preference number: 4 (lower is better)
Translates to: PKPPHLFTSQVAPAWMRPLRCQD*SKKGSI
Trigger: TATGCTGCCCTTTTTGCTGCAGTCTTGACATCTTAA...AGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAAGCGCCCTCGGGAGAGTaGGCTCAGCACAGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKAPSGE*AQHSLE
Trigger: CTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGC...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAAACAGGGGGTACTGCTTaGGGAAGGCCGTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKTGGTA*GRPSGS
Trigger: GGAGCCAGACGGCCTTCCCCAAGCAGTACCCCCTGT...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAATCTCATTGTCCCTGCTaGGCAGGACTGGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKSHCPC*AGLGRE
Trigger: CTCCCGCCCCAGTCCTGCCCAGCAGGGACAATGAGA...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR GCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAAATCACCGCTTCCTCCTaGTCCAGGGGTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKITASS*SRGSSR
Trigger: CCTGCTGGAACCCCTGGAGCAGGAGGAAGCGGTGAT...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS-3UTR CCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAAAAGGAGTTGGCCGGGTaGCTGGGAGAGGAGGACGTT +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKKELAG*LGEEDV
Trigger: AACGTCCTCCTCTCCCAGCCACCCGGCCAACTCCTT...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR TCA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAATCTGCCGACCTTTCTTaGACGGACTCTGGCCACGGT +
Preference number: 4 (lower is better)
Translates to: SLFKRREIHNMETLTLPKSADLS*TDSGHG
Trigger: ACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGA...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS GCA 90 bp CGGGTCAGGCCGCGAGAGGCCCAGGGCCAGCCTGGGGAGCAGAGCTaGTCAGCGGGGCAGAGGTCCTCCTCCGGGCGCCGGGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RVRPREAQGQPGEQS*SAGQRSSSGRRAQG
Trigger: GCCCTGAGCCCGGCGCCCGGAGGAGGACCTCTGCCCCGCTGAGCAGCTCTGCTCCCCAGGCTGGCCCTGGGCCTCTCGCGGCCTGACCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504871.1
ENST00000509233.5
ENST00000510542.1
CDS GCA 90 bp ACACGCACACGCCGCCCGCCCACCAGGCAGACACCCACACACCTGTaGACGCACGCGCACGCCAAGCCAGCGGGCCCTGCCCCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: TRTRRPPTRQTPTHL*THAHAKPAGPAPAP
Trigger: CGGGGCAGGGGCAGGGCCCGCTGGCTTGGCGTGCGCGTGCGTGCACAGGTGTGTGGGTGTCTGCCTGGTGGGCGGGCGGCGTGTGCGTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000617421.4
CDS CCA 90 bp GCCTGCGCTGCACCTCCAGCTCCGCCGACGTCTGCCCGGTGCCGCTaGGGACGGCGGGCGCCGAAAACACCGCGTGCACGCTCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: ACAAPPAPPTSARCR*GRRAPKTPRARSAA
Trigger: CGCTGCAGAGCGTGCACGCGGTGTTTTCGGCGCCCGCCGTCCCCAGCGGCACCGGGCAGACGTCGGCGGAGCTGGAGGTGCAGCGCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS GCA 90 bp GCGAGTGCCTGCGCTGCACCTCCAGCTCCGCCGACGTCTGCCCGGTaGCGCTGGGGACGGCGGGCGCCGAAAACACCGCGTGCACGCTCT +
Preference number: 5 (lower is better)
Translates to: ASACAAPPAPPTSAR*RWGRRAPKTPRARS
Trigger: AGAGCGTGCACGCGGTGTTTTCGGCGCCCGCCGTCCCCAGCGGCACCGGGCAGACGTCGGCGGAGCTGGAGGTGCAGCGCAGGCACTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS GCA 90 bp CGCTGGCACCGTCGTGGCAGCCTCGGGGTGGAAAGCCGAGAGGGCTaGGGCACTTTGGGCTCTGAGGACGGCCCCGAGCACCCGCGACCC +
Preference number: 5 (lower is better)
Translates to: RWHRRGSLGVESREG*GTLGSEDGPEHPRP
Trigger: GGGTCGCGGGTGCTCGGGGCCGTCCTCAGAGCCCAAAGTGCCGCAGCCCTCTCGGCTTTCCACCCCGAGGCTGCCACGACGGTGCCAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS-3UTR CAA 90 bp CCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAGGGCAGGGGCTCCCGTaGTTGGCGGGCTGGACCCGG +
Preference number: 5 (lower is better)
Translates to: PFSAEMVGAASPRSGAARGQGLP*LAGWTR
Trigger: CCGGGTCCAGCCCGCCAACAACGGGAGCCCCTGCCC...TCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS CCA 90 bp CAGCGGGGCAGAGGTCCTCCTCCGGGCGCCGGGCTCAGGGCCCAGTaGCCAGATGGTTTTCTTTGCTGCAGGGAGTGCCGGCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: QRGRGPPPGAGLRAQ*PDGFLCCRECRLRG
Trigger: CCCCCGCAGCCGGCACTCCCTGCAGCAAAGAAAACCATCTGGCCACTGGGCCCTGAGCCCGGCGCCCGGAGGAGGACCTCTGCCCCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504871.1
ENST00000509233.5
ENST00000510542.1
CDS CCA 90 bp AGAGGGGAGCAGCCGCGCGCTGGCACCGTCGTGGCAGCCTCGGGGTaGAAAGCCGAGAGGGCTGCGGCACTTTGGGCTCTGAGGACGGCC +
Preference number: 5 (lower is better)
Translates to: RGEQPRAGTVVAASG*KAERAAALWALRTA
Trigger: GGCCGTCCTCAGAGCCCAAAGTGCCGCAGCCCTCTCGGCTTTCCACCCCGAGGCTGCCACGACGGTGCCAGCGCGCGGCTGCTCCCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS-3UTR CAA 90 bp GCCGCCTGCAGCATGAGCCTGCACAGGAGCCCCCGACACCCCATGGCTCCGGGGGTTCCAGCAGGGCCCTaGGAGGATGTGCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: AACSMSLHRSPRHPMAPGVPAGP*EDVPAA
Trigger: CGCGGCAGGCACATCCTCCAAGGGCCCTGCTGGAAC...CCCCGGAGCCATGGGGTGTCGGGGGCTCCTGTGCAGGCTCATGCTGCAGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS CCA 90 bp TCACCTGGGAGCACAGAGGGGAGCAGCCGCGCGCTGGCACCGTCGTaGCAGCCTCGGGGTGGAAAGCCGAGAGGGCTGCGGCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: SPGSTEGSSRALAPS*QPRGGKPRGLRHFG
Trigger: CCCAAAGTGCCGCAGCCCTCTCGGCTTTCCACCCCGAGGCTGCCACGACGGTGCCAGCGCGCGGCTGCTCCCCTCTGTGCTCCCAGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS GCA 90 bp AGGGGCTCCCGTTGTTGGCGGGCTGGACCCGGACGTAGCGAGTCCTaGTCTTGGTCCCGAGCCTCCCACAGTGGCCTCCGCACAGTCCCC +
Preference number: 5 (lower is better)
Translates to: RGSRCWRAGPGRSES*SWSRASHSGLRTVP
Trigger: GGGGACTGTGCGGAGGCCACTGTGGGAGGCTCGGGACCAAGAGCAGGACTCGCTACGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS CCA 90 bp AGGCCCTGGGGCTCTGTCGCAGCCGCACCAGTGTCACCCTGGCGATaGGAGGCAGGGCCTTCAGCCGCGGGTAGTAGAAGGAGTTGGCCG +
Preference number: 5 (lower is better)
Translates to: RPWGSVAAAPVSPWR*EAGPSAAGSRRSWP
Trigger: CGGCCAACTCCTTCTACTACCCGCGGCTGAAGGCCCTGCCTCCCATCGCCAGGGTGACACTGGTGCGGCTGCGACAGAGCCCCAGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000509697.1
ENST00000617421.4
CDS CCA 90 bp TCCCGTTGTTGGCGGGCTGGACCCGGACGTAGCGAGTCCTGCTCTTaGTCCCGAGCCTCCCACAGTGGCCTCCGCACAGTCCCCAGGACG +
Preference number: 5 (lower is better)
Translates to: SRCWRAGPGRSESCS*SRASHSGLRTVPRT
Trigger: CGTCCTGGGGACTGTGCGGAGGCCACTGTGGGAGGCTCGGGACCAAGAGCAGGACTCGCTACGTCCGGGTCCAGCCCGCCAACAACGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS CCA 90 bp CCAGGCCAAGGCGCCTGTGAGCAGAGCCCCGAGCTGTGTGGTGGCTaGGTCCCGAGACCCCCACAGGTGCCCTGCAGCATAGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: PGQGACEQSPELCGG*VPRPPQVPCSIAVT
Trigger: GGTGACAGCTATGCTGCAGGGCACCTGTGGGGGTCTCGGGACCCAGCCACCACACAGCTCGGGGCTCTGCTCACAGGCGCCTTGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS-3UTR CAA 90 bp AGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGAGGGCAGGGGCTCCCGTaGTTGGCGGGCTGGACCCGG +
Preference number: 5 (lower is better)
Translates to: RAPGLRYLQPRGSQAPGRGQGLP*LAGWTR
Trigger: CCGGGTCCAGCCCGCCAACAACGGGAGCCCCTGCCC...TCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS TCA 90 bp CGGAGCTCCTATTTAAGCCCGAGGCCGGCGCCCCGGGCCGGCCAATaGGGCTCCAGTTCCTCCTGTCTTCGATGCTGCACGGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RSSYLSPRPAPRAGQ*GSSSSCLRCCTARC
Trigger: GCACCTGGCCGTGCAGCATCGAAGACAGGAGGAACTGGAGCCTCATTGGCCGGCCCGGGGCGCCGGCCTCGGGCTTAAATAGGAGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504871.1
CDS TCA 90 bp CGGAGCTCCTATTTAAGCCCGAGGCCGGCGCCCCGGGCCGGCCAATaGGGCTCCAGTTCCTCCTGTCTTCGATGCTGCACGGCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: RSSYLSPRPAPRAGQ*GSSSSCLRCCTAWP
Trigger: AGGCCAGGCCGTGCAGCATCGAAGACAGGAGGAACTGGAGCCTCATTGGCCGGCCCGGGGCGCCGGCCTCGGGCTTAAATAGGAGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502483.5
ENST00000511679.5
ENST00000512888.1
ENST00000514490.5
ENST00000617421.4
CDS GCA 90 bp GTCGCAGCAGGCTGTGCTCGGGTGCAGAGCCTCTCTCCAGCCGTGTaGATGCAGCTCTTCCCGGGGCTCTTGGCTGTGAGGCCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: VAAGCARVQSLSPAV*MQLFPGLLAVRPGL
Trigger: CAGGCCAGGCCTCACAGCCAAGAGCCCCGGGAAGAGCTGCATGCACACGGCTGGAGAGAGGCTCTGCACCCGAGCACAGCCTGCTGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000510542.1
CDS GCA 90 bp CTGGTTCTTCCTCCACATGCTGTAGTCGGAGCTATGCGCGGCCCCTaGAGGACCACCCGGCCGCGCCGCGGACCATGGTCAGACACTGCG +
Preference number: 5 (lower is better)
Translates to: LVLPPHAVVGAMRGP*RTTRPRRGPWSDTA
Trigger: CGCAGTGTCTGACCATGGTCCGCGGCGCGGCCGGGTGGTCCTGCAGGGGCCGCGCATAGCTCCGACTACAGCATGTGGAGGAAGAACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507466.1
CDS GCA 90 bp CCCGAGCTGTGTGGTGGCTGGGTCCCGAGACCCCCACAGGTGCCCTaGAGCATAGCTGTCACCCGGTGGCCACACAGGGCCATCCTAGCA +
Preference number: 5 (lower is better)
Translates to: PELCGGWVPRPPQVP*SIAVTRWPHRAILA
Trigger: TGCTAGGATGGCCCTGTGTGGCCACCGGGTGACAGCTATGCTGCAGGGCACCTGTGGGGGTCTCGGGACCCAGCCACCACACAGCTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CCA 90 bp CGTCGCACAGGTCCAGGCTGTCCACGCCCACGAACCAGTCGGGGCTaGGCACGATGCGCACCACAAACGAGACCAGCGAGTGCCTGCGCT +
Preference number: 5 (lower is better)
Translates to: RRTGPGCPRPRTSRG*ARCAPQTRPASACA
Trigger: AGCGCAGGCACTCGCTGGTCTCGTTTGTGGTGCGCATCGTGCCCAGCCCCGACTGGTTCGTGGGCGTGGACAGCCTGGACCTGTGCGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS CCA 90 bp CGCACTCAGCCTCTTCTTCGAGCTCGGGGCAGGGGCTCCCGTTGTTaGCGGGCTGGACCCGGACGTAGCGAGTCCTGCTCTTGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: RTQPLLRARGRGSRC*RAGPGRSESCSWSR
Trigger: TCGGGACCAAGAGCAGGACTCGCTACGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCTGCCCCGAGCTCGAAGAAGAGGCTGAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS CCA 90 bp CGCACGGCCTGCCCTGAGTGTCCCGGCCGTGAGTCCCCAGCCCACTaGCTTCAGGCACTTCCAAGCCCCTTGCTCGCTTCCCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RTACPECPGRESPAH*LQALPSPLLASLKR
Trigger: CCTCTTCAGGGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCCAGTGGGCTGGGGACTCACGGCCGGGACACTCAGGGCAGGCCGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400762.7
CDS CCA 90 bp ACGGCGCACGGCCCTGAGTGTCCCGGCCGTGAGTCCCCAGCCCACTaGCTTCAGGCACTTCCAAGCCCCTTGCTCGCTTCCCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TAHGPECPGRESPAH*LQALPSPLLASLKR
Trigger: CCTCTTCAGGGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCCAGTGGGCTGGGGACTCACGGCCGGGACACTCAGGGCCGTGCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505653.1
CDS-3UTR CAA 90 bp AGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCTGTGGCCGTCTGGCTCCACTaGCCCGTGAAGGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RDGRRGLTAVRSSAKPPVAVWLH*PVKVML
Trigger: CAGCATCACCTTCACGGGCAAGTGGAGCCAGACGGC...CACAGGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp CAGCCTAGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTCAGGGGCTCCCGTTGTaGGCGGGCTGGACCCGGACG +
Preference number: 5 (lower is better)
Translates to: QPRAPGLRYLQPRGSQAPQGLPL*AGWTRT
Trigger: CGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCTG...AGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp ACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGGGCAGGGGCTCCCGTaGTTGGCGGGCTGGACCCGG +
Preference number: 5 (lower is better)
Translates to: TAPFIHFSSGPRLDAPSGGQGLP*LAGWTR
Trigger: CCGGGTCCAGCCCGCCAACAACGGGAGCCCCTGCCC...TCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS TCA 90 bp CGGAGCTCCTATTTAAGCCCGAGGCCGGCGCCCCGGGCCGGCCAATaGGGCTCCAGTTCCTCCTGTCTTCGATGCTGCACGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: RSSYLSPRPAPRAGQ*GSSSSCLRCCTAFS
Trigger: CGAGAAGGCCGTGCAGCATCGAAGACAGGAGGAACTGGAGCCTCATTGGCCGGCCCGGGGCGCCGGCCTCGGGCTTAAATAGGAGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431380.5
ENST00000503765.5
ENST00000512150.5
CDS GCA 90 bp GTCCAGCAGGTGCCTGGAAGAGCTAGGAGAATGCTCATCAGCACCTaGCCCGCCCCAGGCCAAGGCGCCTGTGAGCAGAGCCCCGAGCTG +
Preference number: 5 (lower is better)
Translates to: VQQVPGRARRMLIST*PAPGQGACEQSPEL
Trigger: CAGCTCGGGGCTCTGCTCACAGGCGCCTTGGCCTGGGGCGGGGCAGGTGCTGATGAGCATTCTCCTAGCTCTTCCAGGCACCTGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS GCA 90 bp ACTGCCACTCGGCCCCAGCGTTCCCAGCCTGCCCTGTCCAGCAGGTaGCTGGAAGAGCTAGGAGAATGCTCATCAGCACCTGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: TATRPQRSQPALSSR*LEELGECSSAPAPP
Trigger: GGGCGGGGCAGGTGCTGATGAGCATTCTCCTAGCTCTTCCAGGCACCTGCTGGACAGGGCAGGCTGGGAACGCTGGGGCCGAGTGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS-3UTR CAA 90 bp CAGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTCAAGTGGCCCCCGCTaGGATGCGCCCTCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QEEEAESRRDTGAPKKQGSSGPR*DAPSGE
Trigger: CTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGA...ACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS TCA 90 bp TCTCTCCAGCCGTGTGCATGCAGCTCTTCCCGGGGCTCTTGGCTGTaGGGCCTGGCCTGTCCCTGTGGCCAAGGCCTGGAGAATCACCGC +
Preference number: 5 (lower is better)
Translates to: SLQPCACSSSRGSWL*GLACPCGQGLENHR
Trigger: GCGGTGATTCTCCAGGCCTTGGCCACAGGGACAGGCCAGGCCTCACAGCCAAGAGCCCCGGGAAGAGCTGCATGCACACGGCTGGAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400762.7
CDS GCA 90 bp AACGGACTCTGGCCACGGTGCCAACGCGTCAACGGTCTGTCCGTCTaGTGTCCGAGCTCAGGGGCCGTCCATGCCTCCACGGCTGGCATA +
Preference number: 5 (lower is better)
Translates to: NGLWPRCQRVNGLSV*CPSSGAVHASTAGI
Trigger: TATGCCAGCCGTGGAGGCATGGACGGCCCCTGAGCTCGGACAGCAGACGGACAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS-3UTR CAA 90 bp TGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACCAGGTCTGAGGTATTCAAGTGGCCCCCGCTaGGATGCGCCCTCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: CALGRVGSAQPRAPGLRYSSGPR*DAPSGE
Trigger: CTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGA...ATACCTCAGACCTGGTGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS TCA 90 bp GCGCCCAGGCCTCGCCGCGCTCCGCAAAGTCGCGCAGCCCGTTACTaGCGTACTGGTTCTTCCTCCACATGCTGTAGTCGGAGCTATGCG +
Preference number: 5 (lower is better)
Translates to: APRPRRAPQSRAARY*RTGSSSTCCSRSYA
Trigger: CGCATAGCTCCGACTACAGCATGTGGAGGAAGAACCAGTACGTCAGTAACGGGCTGCGCGACTTTGCGGAGCGCGGCGAGGCCTGGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000503765.5
ENST00000504909.1
ENST00000507466.1
ENST00000617421.4
CDS TCA 90 bp CGGAGCTCCTATTTAAGCCCGAGGCCGGCGCCCCGGGCCGGCCAATaGGGCTCCAGTTCCTCCTGTCTTCGATGCTGCACGGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RSSYLSPRPAPRAGQ*GSSSSCLRCCTAFF
Trigger: GAAAAAGGCCGTGCAGCATCGAAGACAGGAGGAACTGGAGCCTCATTGGCCGGCCCGGGGCGCCGGCCTCGGGCTTAAATAGGAGCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506266.1
ENST00000509233.5
ENST00000511672.5
ENST00000515004.5
CDS GCA 90 bp AGCAGGGCCCTTGGAGGATGTGCCTGCCGCGTTCTCAGCCCTCTCTaGCGACCTTTCTTGAACGGACTCTGGCCACGGTGCCAACGCGTC +
Preference number: 5 (lower is better)
Translates to: SRALGGCACRVLSPL*RPFLNGLWPRCQRV
Trigger: GACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAGAACGCGGCAGGCACATCCTCCAAGGGCCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS-3UTR CAA 90 bp CTGACGCTTCCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGCAGGGGCTCCCGTTGTaGGCGGGCTGGACCCGGACG +
Preference number: 5 (lower is better)
Translates to: LTLPKPPHLFTSQVAPAWQGLPL*AGWTRT
Trigger: CGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCTG...CCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGGAAGCGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp GTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCGCGAAACCCCCAGAGTAGCTGGAGCCTaGGGGATGACTTTATCCTGC +
Preference number: 5 (lower is better)
Translates to: VQRWSARPHRGQEQRETPRVAGA*GMTLSC
Trigger: GCAGGATAAAGTCATCCCCAAGGCTCCAGCTACTCT...GGGGGTTTCGCGCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp ACCACGTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAATCAAGTGGCCCCCGCTaGGATGCGCCCTCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: TTWEPGPWTMKDNLLEQQSSGPR*DAPSGE
Trigger: CTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGA...TTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCACGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS TCA 90 bp GAGGATGTGCCTGCCGCGTTCTCAGCCCTCTCTGCCGACCTTTCTTaGACGGACTCTGGCCACGGTGCCAACGCGTCAACGGTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: EDVPAAFSALSADLS*TDSGHGANASTVCP
Trigger: CGGACAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAGAACGCGGCAGGCACATCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS GCA 90 bp CTCAGCCCTCTCTGCCGACCTTTCTTGAACGGACTCTGGCCACGGTaGCAACGCGTCAACGGTCTGTCCGTCTGCTGTCCGAGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSPLCRPFLNGLWPR*QRVNGLSVCCPSSG
Trigger: CCCTGAGCTCGGACAGCAGACGGACAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS GCA 90 bp TCAGTTTTCCGGGTCTATGAGGAGTCGCAGCAGGCTGTGCTCGGGTaGAGAGCCTCTCTCCAGCCGTGTGCATGCAGCTCTTCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: SVFRVYEESQQAVLG*RASLQPCACSSSRG
Trigger: GCCCCGGGAAGAGCTGCATGCACACGGCTGGAGAGAGGCTCTGCACCCGAGCACAGCCTGCTGCGACTCCTCATAGACCCGGAAAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400762.7
ENST00000510542.1
ENST00000511672.5
ENST00000515553.1
CDS GCA 90 bp CCAAGCAGTGAGGAAACCAAGGCCTGGAGAATCACCGCTTCCTCCTaGTCCAGGGGTTCCAGCAGGGCCCTTGGAGGATGTGCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: PSSEETKAWRITASS*SRGSSRALGGCACR
Trigger: GCGGCAGGCACATCCTCCAAGGGCCCTGCTGGAACCCCTGGAGCAGGAGGAAGCGGTGATTCTCCAGGCCTTGGTTTCCTCACTGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS CCA 90 bp TGCCGCGTTCTCAGCCCTCTCTGCCGACCTTTCTTGAACGGACTCTaGCCACGGTGCCAACGCGTCAACGGTCTGTCCGTCTGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: CRVLSPLCRPFLNGL*PRCQRVNGLSVCCP
Trigger: CGGACAGCAGACGGACAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAGAACGCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS CCA 90 bp GAGAATCACCGCTTCCTCCTGCTCCAGGGGTTCCAGCAGGGCCCTTaGAGGATGTGCCTGCCGCGTTCTCAGCCCTCTCTGCCGACCTTT +
Preference number: 5 (lower is better)
Translates to: ENHRFLLLQGFQQGP*RMCLPRSQPSLPTF
Trigger: AAAGGTCGGCAGAGAGGGCTGAGAACGCGGCAGGCACATCCTCCAAGGGCCCTGCTGGAACCCCTGGAGCAGGAGGAAGCGGTGATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS CCA 90 bp GTCCCGAGACCCCCACAGGTGCCCTGCAGCATAGCTGTCACCCGGTaGCCACACAGGGCCATCCTAGCAAGCTTCCTTGTCAGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: VPRPPQVPCSIAVTR*PHRAILASFLVSCD
Trigger: GTCACAGCTGACAAGGAAGCTTGCTAGGATGGCCCTGTGTGGCCACCGGGTGACAGCTATGCTGCAGGGCACCTGTGGGGGTCTCGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS-3UTR CAA 90 bp CAGCCTAGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGCCGTCTGGCTCCACTaGCCCGTGAAGGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: QPRAPGLRYLQPRGSQAPAVWLH*PVKVML
Trigger: CAGCATCACCTTCACGGGCAAGTGGAGCCAGACGGC...AGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp ATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGAACAGGGGGTACTGCTaGGGGAAGGCCGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: IHFSSGPRLDAPSGEWAQNRGYC*GKAVWL
Trigger: GAGCCAGACGGCCTTCCCCAAGCAGTACCCCCTGTT...CTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp AGGGCCCTTCAGTGCAGAGATGGTCGGCGCGGCCTCACCGCGGTCAGGAGCAGCAGAGTAGCTGGAGCCTaGGGGATGACTTTATCCTGC +
Preference number: 5 (lower is better)
Translates to: RALQCRDGRRGLTAVRSSRVAGA*GMTLSC
Trigger: GCAGGATAAAGTCATCCCCAAGGCTCCAGCTACTCT...GCTGCTCCTGACCGCGGTGAGGCCGCGCCGACCATCTCTGCACTGAAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp ACCACGTGGGAGCCAGGCCCCTGGACGATGAAGGACAATCTCCTGGAGCAGCAAGCCGTCTGGCTCCACTaGCCCGTGAAGGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: TTWEPGPWTMKDNLLEQQAVWLH*PVKVML
Trigger: CAGCATCACCTTCACGGGCAAGTGGAGCCAGACGGC...TTGCTGCTCCAGGAGATTGTCCTTCATCGTCCAGGGGCCTGGCTCCCACGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp TGGCCCCCGCTTGGATGCGCCCTCGGGAGAGTGGGCTCAGCACAGCCTAGAGCACTGTCTACAATCTCATaGTCCCTGCTGGGCAGGACT +
Preference number: 5 (lower is better)
Translates to: WPPLGCALGRVGSAQPRALSTIS*SLLGRT
Trigger: AGTCCTGCCCAGCAGGGACAATGAGATTGTAGACAG...TGCTCTAGGCTGTGCTGAGCCCACTCTCCCGAGGGCGCATCCAAGCGGGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp AGGAGGAGGAGGCTGAGAGCAGACGGGACACGGGGGCCCCTAAGAAGCAAGGTTCTCTGCCGACCTTTCTaGAACGGACTCTGGCCACGG +
Preference number: 5 (lower is better)
Translates to: RRRRLRADGTRGPLRSKVLCRPF*NGLWPR
Trigger: CCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAG...AACCTTGCTTCTTAGGGGCCCCCGTGTCCCGTCTGCTCTCAGCCTCCTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617421.4
CDS TCA 90 bp CAGCCCACTGGCTTCAGGCACTTCCAAGCCCCTTGCTCGCTTCCCTaGAGAGGCTGTGGGTTTCTCCAGGCCAGGCCTGTGGTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QPTGFRHFQAPCSLP*RGCGFLQARPVVSN
Trigger: ATTGCTGACCACAGGCCTGGCCTGGAGAAACCCACAGCCTCTTCAGGGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCCAGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000511672.5
CDS GCA 90 bp CGTCAACGGTCTGTCCGTCTGCTGTCCGAGCTCAGGGGCCGTCCATaGCTCCACGGCTGGCATACAGTAGCTCTGGTTTTACCCATGAGG +
Preference number: 5 (lower is better)
Translates to: RQRSVRLLSELRGRP*LHGWHTVALVLPMR
Trigger: CCTCATGGGTAAAACCAGAGCTACTGTATGCCAGCCGTGGAGGCATGGACGGCCCCTGAGCTCGGACAGCAGACGGACAGACCGTTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS GCA 90 bp CTCTCCATAATTAGGTCCAAGGCCTGGAGAATCACCGCTTCCTCCTaGTCCAGGGGTTCCAGCAGGGCCCTTGGAGGATGTGCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LSIIRSKAWRITASS*SRGSSRALGGCACR
Trigger: GCGGCAGGCACATCCTCCAAGGGCCCTGCTGGAACCCCTGGAGCAGGAGGAAGCGGTGATTCTCCAGGCCTTGGACCTAATTATGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502657.1
CDS CCA 90 bp CGGCCATGGGGAGCTCGACAGAGGCGTCATTTCTCTCCCACATGGTaGCTGAGAATAGCTGGGTGTGCTGCTCTGTCGCCACACATGGGG +
Preference number: 5 (lower is better)
Translates to: RPWGARQRRHFSPTW*LRIAGCAALSPHMG
Trigger: CCCCATGTGTGGCGACAGAGCAGCACACCCAGCTATTCTCAGCCACCATGTGGGAGAGAAATGACGCCTCTGTCGAGCTCCCCATGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400762.7
CDS-3UTR CAA 90 bp CCGAAACCGCCCCATTTATTCACTTCTCAAGTGGCCCCCGCTTGGATGCGCCCTAACAGGGGGTACTGCTaGGGGAAGGCCGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PKPPHLFTSQVAPAWMRPNRGYC*GKAVWL
Trigger: GAGCCAGACGGCCTTCCCCAAGCAGTACCCCCTGTT...AGGGCGCATCCAAGCGGGGGCCACTTGAGAAGTGAATAAATGGGGCGGTTTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS TCA 90 bp GGTGGTCGCCCTGTGGCAGGGTTCGGGGCTGCTGTGTGTCCCATGTaGCCTGTATGTCCGTTACCTGAGGCGCTGTCTACAATCTCATTG +
Preference number: 5 (lower is better)
Translates to: GGRPVAGFGAAVCPM*PVCPLPEALSTISL
Trigger: CAATGAGATTGTAGACAGCGCCTCAGGTAACGGACATACAGGTCACATGGGACACACAGCAGCCCCGAACCCTGCCACAGGGCGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS-3UTR CAA 90 bp AGAGCACCAGGTCTGAGGTATCTGCAACCACGTGGGAGCCAGGCCCCTGGACGAAGAGTAGCTGGAGCCTaGGGGATGACTTTATCCTGC +
Preference number: 5 (lower is better)
Translates to: RAPGLRYLQPRGSQAPGRRVAGA*GMTLSC
Trigger: GCAGGATAAAGTCATCCCCAAGGCTCCAGCTACTCT...TCGTCCAGGGGCCTGGCTCCCACGTGGTTGCAGATACCTCAGACCTGGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS TCA 90 bp GTTCGGGGCTGCTGTGTGTCCCATGTGACCTGTATGTCCGTTACCTaGGGCGCTGTCTACAATCTCATTGTCCCTGCTGGGCAGGACTGG +
Preference number: 5 (lower is better)
Translates to: VRGCCVSHVTCMSVT*GAVYNLIVPAGQDW
Trigger: CCAGTCCTGCCCAGCAGGGACAATGAGATTGTAGACAGCGCCTCAGGTAACGGACATACAGGTCACATGGGACACACAGCAGCCCCGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS GCA 90 bp CCTTCTAATCAGTTTTCCGGGTCTATGAGGAGTCGCAGCAGGCTGTaGTCGGGTGCAGAGCCTCTCTCCAGCCGTGTGCATGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PSNQFSGSMRSRSRL*SGAEPLSSRVHAAL
Trigger: AAGAGCTGCATGCACACGGCTGGAGAGAGGCTCTGCACCCGAGCACAGCCTGCTGCGACTCCTCATAGACCCGGAAAACTGATTAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400762.7
ENST00000510542.1
ENST00000511672.5
ENST00000515553.1
CDS CCA 90 bp GGGCCAGGGCAGGAGAGGAGAGGCCATGTTTTCCAAGACCGGAGCTaGCAGGAACAGTGTCTCCAGGTGACAAAAGCCTCCGACAATTTG +
Preference number: 5 (lower is better)
Translates to: GPGQERRGHVFQDRS*QEQCLQVTKASDNL
Trigger: CAAATTGTCGGAGGCTTTTGTCACCTGGAGACACTGTTCCTGCCAGCTCCGGTCTTGGAAAACATGGCCTCTCCTCTCCTGCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000505653.1
CDS GCA 90 bp TACAGTAGCTCTGGTTTTACCCATGAGGGGGAAGCCCAGCACCCGTaGCCTCGATCACATCGCCAGTTCACAAACACACATGCGCACACG +
Preference number: 5 (lower is better)
Translates to: YSSSGFTHEGEAQHP*PRSHRQFTNTHAHT
Trigger: CGTGTGCGCATGTGTGTTTGTGAACTGGCGATGTGATCGAGGGCACGGGTGCTGGGCTTCCCCCTCATGGGTAAAACCAGAGCTACTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000617421.4
CDS CCA 90 bp TTGGAATTTCTCAGAGCCTTAGGTTCGGGTTTGGTGGTCGCCCTGTaGCAGGGTTCGGGGCTGCTGTGTGTCCCATGTGACCTGTATGTC +
Preference number: 5 (lower is better)
Translates to: LEFLRALGSGLVVAL*QGSGLLCVPCDLYV
Trigger: GACATACAGGTCACATGGGACACACAGCAGCCCCGAACCCTGCCACAGGGCGACCACCAAACCCGAACCTAAGGCTCTGAGAAATTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS GCA 90 bp CTGAAGAGGCTGTGGGTTTCTCCAGGCCAGGCCTGTGGTCAGCAATaGAGGCAGGTGTTTGTGATCAGGGCATCTGTGCTATCAGGAACA +
Preference number: 5 (lower is better)
Translates to: LKRLWVSPGQACGQQ*RQVFVIRASVLSGT
Trigger: TGTTCCTGATAGCACAGATGCCCTGATCACAAACACCTGCCTGCATTGCTGACCACAGGCCTGGCCTGGAGAAACCCACAGCCTCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000511672.5
CDS GCA 90 bp CTAGCAAGCTTCCTTGTCAGCTGTGACACACAGGTCACCTGTGGGTaGGTGTCTGACAGGACAGAGTCTCTCAGGTACTGTCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LASFLVSCDTQVTCG*VSDRTESLRYCLEP
Trigger: AGGCTCCAGACAGTACCTGAGAGACTCTGTCCTGTCAGACACGCACCCACAGGTGACCTGTGTGTCACAGCTGACAAGGAAGCTTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CCA 90 bp CCTGTGGGTGCGTGTCTGACAGGACAGAGTCTCTCAGGTACTGTCTaGAGCCTCCTTTCATTCTTTCCTCTGGGCTGTGGCCCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: PVGACLTGQSLSGTV*SLLSFFPLGCGPVR
Trigger: TCTTACAGGGCCACAGCCCAGAGGAAAGAATGAAAGGAGGCTCCAGACAGTACCTGAGAGACTCTGTCCTGTCAGACACGCACCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS-3UTR CAA 90 bp TCTTTATTCAAACGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACAGGGGCTCCCGTTGTaGGCGGGCTGGACCCGGACG +
Preference number: 5 (lower is better)
Translates to: SLFKRREIHNMETLTLPKQGLPL*AGWTRT
Trigger: CGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCTG...TTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCGTTTGAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS-3UTR CAA 90 bp CGCAGAGAGATCCATAACATGGAAACACTGACGCTTCCGAAACCGCCCCATTTACTGTCTACAATCTCATaGTCCCTGCTGGGCAGGACT +
Preference number: 5 (lower is better)
Translates to: RREIHNMETLTLPKPPHLLSTIS*SLLGRT
Trigger: AGTCCTGCCCAGCAGGGACAATGAGATTGTAGACAG...TAAATGGGGCGGTTTCGGAAGCGTCAGTGTTTCCATGTTATGGATCTCTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS GCA 90 bp GCTGCACGGCCTGGCCTTTTTCTATCCACGTTAAGATGTCAAGACTaGAGCAAAAAGGGCAGCATAAGGACCTCTGAGAATTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: AARPGLFLSTLRCQD*SKKGSIRTSENSHL
Trigger: AAGATGAGAATTCTCAGAGGTCCTTATGCTGCCCTTTTTGCTGCAGTCTTGACATCTTAACGTGGATAGAAAAAGGCCAGGCCGTGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000502483.5
ENST00000511679.5
ENST00000617421.4
CDS GCA 90 bp TGGAGCCTCCTTTCATTCTTTCCTCTGGGCTGTGGCCCTGTAAGATaGTTTCAACTGCAAATAATGTGCAAGAGTCACATCTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: WSLLSFFPLGCGPVR*FQLQIMCKSHIFSV
Trigger: CACACTGAAGATGTGACTCTTGCACATTATTTGCAGTTGAAAGCATCTTACAGGGCCACAGCCCAGAGGAAAGAATGAAAGGAGGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS GCA 90 bp TCGATGCTGCACGGCCTTTTTCTATCCACGTTAAGATGTCAAGACTaGAGCAAAAAGGGCAGCATAAGGACCTCTGAGAATTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: SMLHGLFLSTLRCQD*SKKGSIRTSENSHL
Trigger: AAGATGAGAATTCTCAGAGGTCCTTATGCTGCCCTTTTTGCTGCAGTCTTGACATCTTAACGTGGATAGAAAAAGGCCGTGCAGCATCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000506266.1
ENST00000509233.5
ENST00000511672.5
ENST00000515004.5
CDS GCA 72 bp CGCCGCCCGCCCACCAGGCAGACACCCACACACCTGTaGACGCACGCGCACGCCAAGCCAGCGGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: RRPPTRQTPTHL*THAHAKPAGPA
Trigger: GGCAGGGCCCGCTGGCTTGGCGTGCGCGTGCGTGCACAGGTGTGTGGGTGTCTGCCTGGTGGGCGGGCGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000617421.4
CDS CCA 72 bp GCACCTCCAGCTCCGCCGACGTCTGCCCGGTGCCGCTaGGGACGGCGGGCGCCGAAAACACCGCGTGCACGC +
Preference number: 6 (lower is better)
Translates to: APPAPPTSARCR*GRRAPKTPRAR
Trigger: GCGTGCACGCGGTGTTTTCGGCGCCCGCCGTCCCCAGCGGCACCGGGCAGACGTCGGCGGAGCTGGAGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS CAA 72 bp CACGCCCTGGCCGGGCCACCCCGTCCCTCCTGGTGCTaGATGCCAAGGGGAGCGGGTCAGGCCGCGAGAGGC +
Preference number: 6 (lower is better)
Translates to: HALAGPPRPSWC*MPRGAGQAARG
Trigger: GCCTCTCGCGGCCTGACCCGCTCCCCTTGGCATCAAGCACCAGGAGGGACGGGGTGGCCCGGCCAGGGCGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504871.1
ENST00000509233.5
ENST00000510542.1
CDS CAA 90 bp GGGAACACCCACGCCCTGGCCGGGCCACCCCGTCCCTCCTGGTGCTaGATGCCAAGGGGAGCGGGTCAGGCCGCGAGAGGCCCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: GNTHALAGPPRPSWC*MPRGAGQAARGPGP
Trigger: TGGCCCTGGGCCTCTCGCGGCCTGACCCGCTCCCCTTGGCATCAAGCACCAGGAGGGACGGGGTGGCCCGGCCAGGGCGTGGGTGTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504871.1
ENST00000509233.5
ENST00000510542.1
CDS GCA 72 bp ACCCACGCCCTGGCCGGGCCACCCCGTCCCTCCTGGTaGTTGATGCCAAGGGGAGCGGGTCAGGCCGCGAGA +
Preference number: 6 (lower is better)
Translates to: THALAGPPRPSW*LMPRGAGQAAR
Trigger: TCTCGCGGCCTGACCCGCTCCCCTTGGCATCAAGCACCAGGAGGGACGGGGTGGCCCGGCCAGGGCGTGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504871.1
ENST00000509233.5
ENST00000510542.1
CDS GCA 72 bp GACCACCCGGCCGCGCCGCGGACCATGGTCAGACACTaGGGTCGGGCTTGGATTCCAGGGGGCGCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: DHPAAPRTMVRH*GRAWIPGGAPG
Trigger: TCCTGGGGCGCCCCCTGGAATCCAAGCCCGACCGCAGTGTCTGACCATGGTCCGCGGCGCGGCCGGGTGGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507466.1
CDS CCA 72 bp AACACCCACGCCCTGGCCGGGCCACCCCGTCCCTCCTaGTGCTTGATGCCAAGGGGAGCGGGTCAGGCCGCG +
Preference number: 6 (lower is better)
Translates to: NTHALAGPPRPS*CLMPRGAGQAA
Trigger: CGCGGCCTGACCCGCTCCCCTTGGCATCAAGCACCAGGAGGGACGGGGTGGCCCGGCCAGGGCGTGGGTGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504871.1
ENST00000509233.5
ENST00000510542.1
CDS CCA 72 bp GGCCCCTGCAGGACCACCCGGCCGCGCCGCGGACCATaGTCAGACACTGCGGTCGGGCTTGGATTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GPCRTTRPRRGP*SDTAVGLGFQG
Trigger: CCCCTGGAATCCAAGCCCGACCGCAGTGTCTGACCATGGTCCGCGGCGCGGCCGGGTGGTCCTGCAGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507466.1
CDS CCA 72 bp AGCACAGAGGGGAGCAGCCGCGCGCTGGCACCGTCGTaGCAGCCTCGGGGTGGAAAGCCGAGAGGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: STEGSSRALAPS*QPRGGKPRGLR
Trigger: CCGCAGCCCTCTCGGCTTTCCACCCCGAGGCTGCCACGACGGTGCCAGCGCGCGGCTGCTCCCCTCTGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS GCA 72 bp GGGACGGCGGGCGCCGAAAACACCGCGTGCACGCTCTaGAGCGCCTCCCCCGCCGCCTCGATCTCCTTCATC +
Preference number: 6 (lower is better)
Translates to: GTAGAENTACTL*SASPAASISFI
Trigger: GATGAAGGAGATCGAGGCGGCGGGGGAGGCGCTGCAGAGCGTGCACGCGGTGTTTTCGGCGCCCGCCGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS GCA 72 bp TCTGAGGACGGCCCCGAGCACCCGCGACCCCCTCCCTaGTCCGCAAAGCTCTCCTGCGGTGCTTCCGAGACC +
Preference number: 6 (lower is better)
Translates to: SEDGPEHPRPPP*SAKLSCGASET
Trigger: GGTCTCGGAAGCACCGCAGGAGAGCTTTGCGGAGCAGGGAGGGGGTCGCGGGTGCTCGGGGCCGTCCTCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS GCA 72 bp CGTCGTGGCAGCCTCGGGGTGGAAAGCCGAGAGGGCTaGGGCACTTTGGGCTCTGAGGACGGCCCCGAGCAC +
Preference number: 6 (lower is better)
Translates to: RRGSLGVESREG*GTLGSEDGPEH
Trigger: GTGCTCGGGGCCGTCCTCAGAGCCCAAAGTGCCGCAGCCCTCTCGGCTTTCCACCCCGAGGCTGCCACGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS CCA 72 bp GCTCTGGCGGAACAGATGGACTCTCCCCCAAGAGGCTaGCCGGCGGCGCCGAGAGTGGCCAGGAGGAGAGCG +
Preference number: 6 (lower is better)
Translates to: ALAEQMDSPPRG*PAAPRVARRRA
Trigger: CGCTCTCCTCCTGGCCACTCTCGGCGCCGCCGGCCAGCCTCTTGGGGGAGAGTCCATCTGTTCCGCCAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000502483.5
ENST00000503765.5
ENST00000504909.1
ENST00000512150.5
ENST00000512888.1
ENST00000515004.5
ENST00000617421.4
CDS CCA 72 bp CATCACCTGGGAGCACAGAGGGGAGCAGCCGCGCGCTaGCACCGTCGTGGCAGCCTCGGGGTGGAAAGCCGA +
Preference number: 6 (lower is better)
Translates to: HHLGAQRGAAAR*HRRGSLGVESR
Trigger: TCGGCTTTCCACCCCGAGGCTGCCACGACGGTGCCAGCGCGCGGCTGCTCCCCTCTGTGCTCCCAGGTGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS CCA 72 bp CCCAGGAAATCCCTCCCCGCCGCCCGCAGGGAACCATaGCCCCCAGTCACGTCGGACCGTGACACCCTGTGG +
Preference number: 6 (lower is better)
Translates to: PRKSLPAARREP*PPVTSDRDTLW
Trigger: CCACAGGGTGTCACGGTCCGACGTGACTGGGGGCCATGGTTCCCTGCGGGCGGCGGGGAGGGATTTCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512888.1
CDS CAA 72 bp CGCGCCGCGGACCATGGTCAGACACTGCGGTCGGGCTaGGATTCCAGGGGGCGCCCCAGGAAATCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: RAADHGQTLRSG*DSRGRPRKSLP
Trigger: GGGGAGGGATTTCCTGGGGCGCCCCCTGGAATCCAAGCCCGACCGCAGTGTCTGACCATGGTCCGCGGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507466.1
CDS GCA 72 bp ATGCGCACCACAAACGAGACCAGCGAGTGCCTGCGCTaGACCTCCAGCTCCGCCGACGTCTGCCCGGTGCCG +
Preference number: 6 (lower is better)
Translates to: MRTTNETSECLR*TSSSADVCPVP
Trigger: CGGCACCGGGCAGACGTCGGCGGAGCTGGAGGTGCAGCGCAGGCACTCGCTGGTCTCGTTTGTGGTGCGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS GCA 72 bp GCGACCCCCTCCCTGCTCCGCAAAGCTCTCCTGCGGTaGTTCCGAGACCCCCATCAGCGGAATGGACGGCGC +
Preference number: 6 (lower is better)
Translates to: ATPSLLRKALLR*FRDPHQRNGRR
Trigger: GCGCCGTCCATTCCGCTGATGGGGGTCTCGGAAGCACCGCAGGAGAGCTTTGCGGAGCAGGGAGGGGGTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS CCA 72 bp TGGCGGGCTGGACCCGGACGTAGCGAGTCCTGCTCTTaGTCCCGAGCCTCCCACAGTGGCCTCCGCACAGTC +
Preference number: 6 (lower is better)
Translates to: WRAGPGRSESCS*SRASHSGLRTV
Trigger: GACTGTGCGGAGGCCACTGTGGGAGGCTCGGGACCAAGAGCAGGACTCGCTACGTCCGGGTCCAGCCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS CCA 72 bp GGCGCCTGTGAGCAGAGCCCCGAGCTGTGTGGTGGCTaGGTCCCGAGACCCCCACAGGTGCCCTGCAGCATA +
Preference number: 6 (lower is better)
Translates to: GACEQSPELCGG*VPRPPQVPCSI
Trigger: TATGCTGCAGGGCACCTGTGGGGGTCTCGGGACCCAGCCACCACACAGCTCGGGGCTCTGCTCACAGGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS GCA 72 bp TGGCCACGGTGCCAACGCGTCAACGGTCTGTCCGTCTaGTGTCCGAGCTCAGGGGCCGTCCATGCCTCCACG +
Preference number: 6 (lower is better)
Translates to: WPRCQRVNGLSV*CPSSGAVHAST
Trigger: CGTGGAGGCATGGACGGCCCCTGAGCTCGGACAGCAGACGGACAGACCGTTGACGCGTTGGCACCGTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS GCA 72 bp CACCCGCGACCCCCTCCCTGCTCCGCAAAGCTCTCCTaGGGTGCTTCCGAGACCCCCATCAGCGGAATGGAC +
Preference number: 6 (lower is better)
Translates to: HPRPPPCSAKLS*GASETPISGMD
Trigger: GTCCATTCCGCTGATGGGGGTCTCGGAAGCACCGCAGGAGAGCTTTGCGGAGCAGGGAGGGGGTCGCGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504909.1
CDS CCA 72 bp GGCTCTGTCGCAGCCGCACCAGTGTCACCCTGGCGATaGGAGGCAGGGCCTTCAGCCGCGGGTAGTAGAAGG +
Preference number: 6 (lower is better)
Translates to: GSVAAAPVSPWR*EAGPSAAGSRR
Trigger: CCTTCTACTACCCGCGGCTGAAGGCCCTGCCTCCCATCGCCAGGGTGACACTGGTGCGGCTGCGACAGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000509697.1
ENST00000617421.4
CDS CCA 72 bp CCTCTTCTTCGAGCTCGGGGCAGGGGCTCCCGTTGTTaGCGGGCTGGACCCGGACGTAGCGAGTCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PLLRARGRGSRC*RAGPGRSESCS
Trigger: AGAGCAGGACTCGCTACGTCCGGGTCCAGCCCGCCAACAACGGGAGCCCCTGCCCCGAGCTCGAAGAAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000617421.4
CDS CCA 72 bp GGCCCTGAGTGTCCCGGCCGTGAGTCCCCAGCCCACTaGCTTCAGGCACTTCCAAGCCCCTTGCTCGCTTCC +
Preference number: 6 (lower is better)
Translates to: GPECPGRESPAH*LQALPSPLLAS
Trigger: GGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCCAGTGGGCTGGGGACTCACGGCCGGGACACTCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505653.1
CDS GCA 72 bp TGTCCACGCCCACGAACCAGTCGGGGCTGGGCACGATaGGCACCACAAACGAGACCAGCGAGTGCCTGCGCT +
Preference number: 6 (lower is better)
Translates to: CPRPRTSRGWAR*APQTRPASACA
Trigger: AGCGCAGGCACTCGCTGGTCTCGTTTGTGGTGCGCATCGTGCCCAGCCCCGACTGGTTCGTGGGCGTGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS GCA 72 bp GGCTGTGCTCGGGTGCAGAGCCTCTCTCCAGCCGTGTaGATGCAGCTCTTCCCGGGGCTCTTGGCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GCARVQSLSPAV*MQLFPGLLAVR
Trigger: CCTCACAGCCAAGAGCCCCGGGAAGAGCTGCATGCACACGGCTGGAGAGAGGCTCTGCACCCGAGCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000510542.1
CDS GCA 72 bp CACCTCCAGTTATTCCAGGAGAAACGGCGCACGGCCTaGCCTGAGTGTCCCGGCCGTGAGTCCCCAGCCCAC +
Preference number: 6 (lower is better)
Translates to: HLQLFQEKRRTA*PECPGRESPAH
Trigger: GTGGGCTGGGGACTCACGGCCGGGACACTCAGGGCAGGCCGTGCGCCGTTTCTCCTGGAATAACTGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400762.7
CDS CCA 72 bp GGTCCAGGCTGTCCACGCCCACGAACCAGTCGGGGCTaGGCACGATGCGCACCACAAACGAGACCAGCGAGT +
Preference number: 6 (lower is better)
Translates to: GPGCPRPRTSRG*ARCAPQTRPAS
Trigger: ACTCGCTGGTCTCGTTTGTGGTGCGCATCGTGCCCAGCCCCGACTGGTTCGTGGGCGTGGACAGCCTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000507466.1
ENST00000617421.4
CDS CCA 72 bp TGCCCTGAGTGTCCCGGCCGTGAGTCCCCAGCCCACTaGCTTCAGGCACTTCCAAGCCCCTTGCTCGCTTCC +
Preference number: 6 (lower is better)
Translates to: CPECPGRESPAH*LQALPSPLLAS
Trigger: GGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCCAGTGGGCTGGGGACTCACGGCCGGGACACTCAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000511672.5
CDS CAA 90 bp GGCCGTGAGTCCCCAGCCCACTGGCTTCAGGCACTTCCAAGCCCCTaGCTCGCTTCCCTGAAGAGGCTGTGGGTTTCTCCAGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GRESPAHWLQALPSP*LASLKRLWVSPGQA
Trigger: GGCCTGGCCTGGAGAAACCCACAGCCTCTTCAGGGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCCAGTGGGCTGGGGACTCACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000511672.5
CDS TCA 72 bp TATTTAAGCCCGAGGCCGGCGCCCCGGGCCGGCCAATaGGGCTCCAGTTCCTCCTGTCTTCGATGCTGCACG +
Preference number: 6 (lower is better)
Translates to: YLSPRPAPRAGQ*GSSSSCLRCCT
Trigger: CGTGCAGCATCGAAGACAGGAGGAACTGGAGCCTCATTGGCCGGCCCGGGGCGCCGGCCTCGGGCTTAAATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000431380.5
ENST00000502483.5
ENST00000503765.5
ENST00000504871.1
ENST00000506266.1
ENST00000509233.5
ENST00000511672.5
ENST00000511679.5
ENST00000512150.5
ENST00000512888.1
ENST00000514490.5
ENST00000515004.5
ENST00000617421.4
CDS GCA 72 bp GTGCCTGGAAGAGCTAGGAGAATGCTCATCAGCACCTaGCCCGCCCCAGGCCAAGGCGCCTGTGAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: VPGRARRMLIST*PAPGQGACEQS
Trigger: GCTCTGCTCACAGGCGCCTTGGCCTGGGGCGGGGCAGGTGCTGATGAGCATTCTCCTAGCTCTTCCAGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CAA 90 bp GGAGAATCACCGCTTCCTCCTGCTCCAGGGGTTCCAGCAGGGCCCTaGGAGGATGTGCCTGCCGCGTTCTCAGCCCTCTCTGCCGACCTT +
Preference number: 6 (lower is better)
Translates to: GESPLPPAPGVPAGP*EDVPAAFSALSADL
Trigger: AAGGTCGGCAGAGAGGGCTGAGAACGCGGCAGGCACATCCTCCAAGGGCCCTGCTGGAACCCCTGGAGCAGGAGGAAGCGGTGATTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS GCA 72 bp CGGCCCCAGCGTTCCCAGCCTGCCCTGTCCAGCAGGTaGCTGGAAGAGCTAGGAGAATGCTCATCAGCACCT +
Preference number: 6 (lower is better)
Translates to: RPQRSQPALSSR*LEELGECSSAP
Trigger: AGGTGCTGATGAGCATTCTCCTAGCTCTTCCAGGCACCTGCTGGACAGGGCAGGCTGGGAACGCTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CCA 72 bp CCCCCACAGGTGCCCTGCAGCATAGCTGTCACCCGGTaGCCACACAGGGCCATCCTAGCAAGCTTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: PPQVPCSIAVTR*PHRAILASFLV
Trigger: GACAAGGAAGCTTGCTAGGATGGCCCTGTGTGGCCACCGGGTGACAGCTATGCTGCAGGGCACCTGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CAA 90 bp GGGCGGAACAGGGGGTACTGCTTGGGGAAGGCCGTCTGGCTCCACTaGCCCGTGAAGGTGATGCTGTATTTGGCCAGGGCTCTGGCGGAA +
Preference number: 6 (lower is better)
Translates to: GRNRGYCLGKAVWLH*PVKVMLYLARALAE
Trigger: TTCCGCCAGAGCCCTGGCCAAATACAGCATCACCTTCACGGGCAAGTGGAGCCAGACGGCCTTCCCCAAGCAGTACCCCCTGTTCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000503765.5
ENST00000504909.1
ENST00000512150.5
ENST00000512888.1
ENST00000617421.4
CDS CAA 90 bp GGAGGATGTGCCTGCCGCGTTCTCAGCCCTCTCTGCCGACCTTTCTaGAACGGACTCTGGCCACGGTGCCAACGCGTCAACGGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: GGCACRVLSPLCRPF*NGLWPRCQRVNGLS
Trigger: GGACAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAGAACGCGGCAGGCACATCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS CAA 90 bp GGGAAGGCCGTCTGGCTCCACTTGCCCGTGAAGGTGATGCTGTATTaGGCCAGGGCTCTGGCGGAACAGATGGACTCTCCCCCAAGAGGC +
Preference number: 6 (lower is better)
Translates to: GKAVWLHLPVKVMLY*ARALAEQMDSPPRG
Trigger: GCCTCTTGGGGGAGAGTCCATCTGTTCCGCCAGAGCCCTGGCCAAATACAGCATCACCTTCACGGGCAAGTGGAGCCAGACGGCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000502483.5
ENST00000503765.5
ENST00000504909.1
ENST00000512150.5
ENST00000512888.1
ENST00000515004.5
ENST00000617421.4
CDS TCA 72 bp CCTCGCCGCGCTCCGCAAAGTCGCGCAGCCCGTTACTaGCGTACTGGTTCTTCCTCCACATGCTGTAGTCGG +
Preference number: 6 (lower is better)
Translates to: PRRAPQSRAARY*RTGSSSTCCSR
Trigger: CCGACTACAGCATGTGGAGGAAGAACCAGTACGTCAGTAACGGGCTGCGCGACTTTGCGGAGCGCGGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000503765.5
ENST00000504909.1
ENST00000507466.1
ENST00000617421.4
CDS TCA 72 bp GGCTTCAGGCACTTCCAAGCCCCTTGCTCGCTTCCCTaGAGAGGCTGTGGGTTTCTCCAGGCCAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: GFRHFQAPCSLP*RGCGFLQARPV
Trigger: CACAGGCCTGGCCTGGAGAAACCCACAGCCTCTTCAGGGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000511672.5
CDS GCA 72 bp CTCTGCCGACCTTTCTTGAACGGACTCTGGCCACGGTaGCAACGCGTCAACGGTCTGTCCGTCTGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: LCRPFLNGLWPR*QRVNGLSVCCP
Trigger: CGGACAGCAGACGGACAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS GCA 72 bp CTTGGAGGATGTGCCTGCCGCGTTCTCAGCCCTCTCTaGCGACCTTTCTTGAACGGACTCTGGCCACGGTGC +
Preference number: 6 (lower is better)
Translates to: LGGCACRVLSPL*RPFLNGLWPRC
Trigger: GCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAGAACGCGGCAGGCACATCCTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS GCA 72 bp TCCAGGCATCTTTCCTGGCTGTGGGGTTCTACTGGGTaGAGAAATGCCCACGTCCAGCTGGCAGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: SRHLSWLWGSTG*RNAHVQLAGGA
Trigger: GGCCCCTCCTGCCAGCTGGACGTGGGCATTTCTGCACCCAGTAGAACCCCACAGCCAGGAAAGATGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000505653.1
CDS GCA 72 bp CGGGTTTGGTGGTCGCCCTGTGGCAGGGTTCGGGGCTaGTGTGTGTCCCATGTGACCTGTATGTCCGTTACC +
Preference number: 6 (lower is better)
Translates to: RVWWSPCGRVRG*CVSHVTCMSVT
Trigger: GGTAACGGACATACAGGTCACATGGGACACACAGCAGCCCCGAACCCTGCCACAGGGCGACCACCAAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CCA 72 bp TCAGCCGCGGGTAGTAGAAGGAGTTGGCCGGGTGGCTaGGAGAGGAGGACGTTATCTCGGTCACCGTGTCCT +
Preference number: 6 (lower is better)
Translates to: SAAGSRRSWPGG*ERRTLSRSPCP
Trigger: AGGACACGGTGACCGAGATAACGTCCTCCTCTCCCAGCCACCCGGCCAACTCCTTCTACTACCCGCGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000509697.1
ENST00000617421.4
CDS CCA 72 bp CTGTCCGAGCTCAGGGGCCGTCCATGCCTCCACGGCTaGCATACAGTAGCTCTGGTTTTACCCATGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LSELRGRPCLHG*HTVALVLPMRG
Trigger: CCCCCTCATGGGTAAAACCAGAGCTACTGTATGCCAGCCGTGGAGGCATGGACGGCCCCTGAGCTCGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS CCA 72 bp CTCAGCCCTCTCTGCCGACCTTTCTTGAACGGACTCTaGCCACGGTGCCAACGCGTCAACGGTCTGTCCGTC +
Preference number: 6 (lower is better)
Translates to: LSPLCRPFLNGL*PRCQRVNGLSV
Trigger: GACGGACAGACCGTTGACGCGTTGGCACCGTGGCCAGAGTCCGTTCAAGAAAGGTCGGCAGAGAGGGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400762.7
ENST00000502657.1
ENST00000506266.1
ENST00000511679.5
ENST00000617421.4
CDS CCA 72 bp CTCAGAGCCTTAGGTTCGGGTTTGGTGGTCGCCCTGTaGCAGGGTTCGGGGCTGCTGTGTGTCCCATGTGAC +
Preference number: 6 (lower is better)
Translates to: LRALGSGLVVAL*QGSGLLCVPCD
Trigger: GTCACATGGGACACACAGCAGCCCCGAACCCTGCCACAGGGCGACCACCAAACCCGAACCTAAGGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS GCA 72 bp CAGTTTTCCGGGTCTATGAGGAGTCGCAGCAGGCTGTaGTCGGGTGCAGAGCCTCTCTCCAGCCGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: QFSGSMRSRSRL*SGAEPLSSRVH
Trigger: ATGCACACGGCTGGAGAGAGGCTCTGCACCCGAGCACAGCCTGCTGCGACTCCTCATAGACCCGGAAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400762.7
ENST00000510542.1
ENST00000511672.5
ENST00000515553.1
CDS CCA 72 bp GGGCGGAACAGGGGGTACTGCTTGGGGAAGGCCGTCTaGCTCCACTTGCCCGTGAAGGTGATGCTGTATTTG +
Preference number: 6 (lower is better)
Translates to: GRNRGYCLGKAV*LHLPVKVMLYL
Trigger: CAAATACAGCATCACCTTCACGGGCAAGTGGAGCCAGACGGCCTTCCCCAAGCAGTACCCCCTGTTCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000503765.5
ENST00000504909.1
ENST00000512150.5
ENST00000512888.1
ENST00000617421.4
CDS CCA 72 bp GCCTTCCAGGCATCTTTCCTGGCTGTGGGGTTCTACTaGGTGCAGAAATGCCCACGTCCAGCTGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AFQASFLAVGFY*VQKCPRPAGRR
Trigger: CCTCCTGCCAGCTGGACGTGGGCATTTCTGCACCCAGTAGAACCCCACAGCCAGGAAAGATGCCTGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000505653.1
CDS CAA 72 bp AGGGGGTACTGCTTGGGGAAGGCCGTCTGGCTCCACTaGCCCGTGAAGGTGATGCTGTATTTGGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RGYCLGKAVWLH*PVKVMLYLARA
Trigger: AGCCCTGGCCAAATACAGCATCACCTTCACGGGCAAGTGGAGCCAGACGGCCTTCCCCAAGCAGTACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000290902.10
ENST00000431380.5
ENST00000503765.5
ENST00000504909.1
ENST00000512150.5
ENST00000512888.1
ENST00000515004.5
ENST00000617421.4
CDS CAA 72 bp TCCCCAGCCCACTGGCTTCAGGCACTTCCAAGCCCCTaGCTCGCTTCCCTGAAGAGGCTGTGGGTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SPAHWLQALPSP*LASLKRLWVSP
Trigger: TGGAGAAACCCACAGCCTCTTCAGGGAAGCGAGCAAGGGGCTTGGAAGTGCCTGAAGCCAGTGGGCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000511672.5
CDS TCA 72 bp CCTGTGGCAGGGTTCGGGGCTGCTGTGTGTCCCATGTaGCCTGTATGTCCGTTACCTGAGGCGCTGTCTACA +
Preference number: 6 (lower is better)
Translates to: PVAGFGAAVCPM*PVCPLPEALST
Trigger: TGTAGACAGCGCCTCAGGTAACGGACATACAGGTCACATGGGACACACAGCAGCCCCGAACCCTGCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CCA 72 bp GCGTCATTTCTCTCCCACATGGTGGCTGAGAATAGCTaGGTGTGCTGCTCTGTCGCCACACATGGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: ASFLSHMVAENS*VCCSVATHGVP
Trigger: GGGGACCCCATGTGTGGCGACAGAGCAGCACACCCAGCTATTCTCAGCCACCATGTGGGAGAGAAATGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000505653.1
CDS CAA 72 bp TCCCAGCTACTCGGGGGTCTGAGGCACGAGAATCGCTaGAACCCATGGGTGGAGGTTGCAGCGAGCCGAAAT +
Preference number: 6 (lower is better)
Translates to: SQLLGGLRHENR*NPWVEVAASRN
Trigger: ATTTCGGCTCGCTGCAACCTCCACCCATGGGTTCAAGCGATTCTCGTGCCTCAGACCCCCGAGTAGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400762.7
CDS CAA 72 bp CCCTACTTGGAATTTCTCAGAGCCTTAGGTTCGGGTTaGGTGGTCGCCCTGTGGCAGGGTTCGGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PYLEFLRALGSG*VVALWQGSGLL
Trigger: CAGCAGCCCCGAACCCTGCCACAGGGCGACCACCAAACCCGAACCTAAGGCTCTGAGAAATTCCAAGTAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS TCA 72 bp GCCAGGCCTGTGGTCAGCAATGCAGGCAGGTGTTTGTaGTCAGGGCATCTGTGCTATCAGGAACAGCCCCCA +
Preference number: 6 (lower is better)
Translates to: ARPVVSNAGRCL*SGHLCYQEQPP
Trigger: TGGGGGCTGTTCCTGATAGCACAGATGCCCTGATCACAAACACCTGCCTGCATTGCTGACCACAGGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000511672.5
CDS CCA 72 bp GGAGCTCGACAGAGGCGTCATTTCTCTCCCACATGGTaGCTGAGAATAGCTGGGTGTGCTGCTCTGTCGCCA +
Preference number: 6 (lower is better)
Translates to: GARQRRHFSPTW*LRIAGCAALSP
Trigger: TGGCGACAGAGCAGCACACCCAGCTATTCTCAGCCACCATGTGGGAGAGAAATGACGCCTCTGTCGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400762.7
CDS CAA 90 bp ACTACGAATCCCTACTTGGAATTTCTCAGAGCCTTAGGTTCGGGTTaGGTGGTCGCCCTGTGGCAGGGTTCGGGGCTGCTGTGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: TTNPYLEFLRALGSG*VVALWQGSGLLCVP
Trigger: TGGGACACACAGCAGCCCCGAACCCTGCCACAGGGCGACCACCAAACCCGAACCTAAGGCTCTGAGAAATTCCAAGTAGGGATTCGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CCA 72 bp CAGGAGAGGAGAGGCCATGTTTTCCAAGACCGGAGCTaGCAGGAACAGTGTCTCCAGGTGACAAAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: QERRGHVFQDRS*QEQCLQVTKAS
Trigger: GGAGGCTTTTGTCACCTGGAGACACTGTTCCTGCCAGCTCCGGTCTTGGAAAACATGGCCTCTCCTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000505653.1
CDS GCA 72 bp TCTGGTTTTACCCATGAGGGGGAAGCCCAGCACCCGTaGCCTCGATCACATCGCCAGTTCACAAACACACAT +
Preference number: 6 (lower is better)
Translates to: SGFTHEGEAQHP*PRSHRQFTNTH
Trigger: ATGTGTGTTTGTGAACTGGCGATGTGATCGAGGGCACGGGTGCTGGGCTTCCCCCTCATGGGTAAAACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400762.7
ENST00000617421.4
CDS CCA 72 bp GCGTGTCTGACAGGACAGAGTCTCTCAGGTACTGTCTaGAGCCTCCTTTCATTCTTTCCTCTGGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: ACLTGQSLSGTV*SLLSFFPLGCG
Trigger: GCCACAGCCCAGAGGAAAGAATGAAAGGAGGCTCCAGACAGTACCTGAGAGACTCTGTCCTGTCAGACACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS TCA 72 bp TGCTGTGTGTCCCATGTGACCTGTATGTCCGTTACCTaGGGCGCTGTCTACAATCTCATTGTCCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: CCVSHVTCMSVT*GAVYNLIVPAG
Trigger: CCCAGCAGGGACAATGAGATTGTAGACAGCGCCTCAGGTAACGGACATACAGGTCACATGGGACACACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS TCA 72 bp ATATTCCCTTTGCCATGGCAACTGAGTAGTTGGGGGTaGAGGTTAGGATGCTGTATGGAGCAGCTCCGGCCA +
Preference number: 6 (lower is better)
Translates to: IFPLPWQLSSWG*RLGCCMEQLRP
Trigger: TGGCCGGAGCTGCTCCATACAGCATCCTAACCTTCACCCCCAACTACTCAGTTGCCATGGCAAAGGGAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400762.7
CDS CAA 90 bp AAATCTTCTAGGCACCATCTTGCAGTACGCACTACGAATCCCTACTaGGAATTTCTCAGAGCCTTAGGTTCGGGTTTGGTGGTCGCCCTG +
Preference number: 6 (lower is better)
Translates to: KSSRHHLAVRTTNPY*EFLRALGSGLVVAL
Trigger: CAGGGCGACCACCAAACCCGAACCTAAGGCTCTGAGAAATTCCAAGTAGGGATTCGTAGTGCGTACTGCAAGATGGTGCCTAGAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS CAA 72 bp AGGCACCATCTTGCAGTACGCACTACGAATCCCTACTaGGAATTTCTCAGAGCCTTAGGTTCGGGTTTGGTG +
Preference number: 6 (lower is better)
Translates to: RHHLAVRTTNPY*EFLRALGSGLV
Trigger: CACCAAACCCGAACCTAAGGCTCTGAGAAATTCCAAGTAGGGATTCGTAGTGCGTACTGCAAGATGGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1
CDS GCA 72 bp CTTTCATTCTTTCCTCTGGGCTGTGGCCCTGTAAGATaGTTTCAACTGCAAATAATGTGCAAGAGTCACATC +
Preference number: 6 (lower is better)
Translates to: LSFFPLGCGPVR*FQLQIMCKSHI
Trigger: GATGTGACTCTTGCACATTATTTGCAGTTGAAAGCATCTTACAGGGCCACAGCCCAGAGGAAAGAATGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509697.1