RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPON1 (Homo sapiens)

Ensembl gene IDs: ENSG00000262655

Ensembl transcript IDs: ENST00000576479.4, ENST00000591785.1

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGCCGCACCCTGGGACTCAGGCATAGTCACTTCCAGACATGGTTaGCTCTCCATGTGGAGTAGGTCAAAGTCTCCGTCCTCCCTGGCC +
Preference number: 1 (lower is better)
Translates to: PAAPWDSGIVTSRHG*LSMWSRSKSPSSLA
Trigger: GGCCAGGGAGGACGGAGACTTTGACCTACTCCACATGGAGAGGCAACCATGTCTGGAAGTGACTATGCCTGAGTCCCAGGGTGCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR GCA 90 bp AGGGACATGTTTCAGCTTAGTACAAGGTGGCTGACACTACTCCTCTaGAGGAAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTG +
Preference number: 1 (lower is better)
Translates to: RDMFQLSTRWLTLLL*RKRLAGGEGAPLSL
Trigger: CAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTGAAACATGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR TCA 90 bp GGTGGAAGCTCCAGAGGGACATGTTTCAGCTTAGTACAAGGTGGCTaGCACTACTCCTCTGCAGGAAGAGGCTGGCTGGAGGTGAGGGCG +
Preference number: 1 (lower is better)
Translates to: GGSSRGTCFSLVQGG*HYSSAGRGWLEVRA
Trigger: CGCCCTCACCTCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTGAAACATGTCCCTCTGGAGCTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR TCA 90 bp AAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAGGTaGGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTATTCAGAA +
Preference number: 1 (lower is better)
Translates to: KVADTTPLQEEAGWR*GRPTQPVPIKKYSE
Trigger: TTCTGAATACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 90 bp GCCAGGTGGAAGCTCCAGAGGGACATGTTTCAGCTTAGTACAAGGTaGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAGGTGAG +
Preference number: 1 (lower is better)
Translates to: ARWKLQRDMFQLSTR*LTLLLCRKRLAGGE
Trigger: CTCACCTCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTGAAACATGTCCCTCTGGAGCTTCCACCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 90 bp TGGGACTCAGGCATAGTCACTTCCAGACATGGTTGCCTCTCCATGTaGAGTAGGTCAAAGTCTCCGTCCTCCCTGGCCAGGTGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: WDSGIVTSRHGCLSM*SRSKSPSSLARWKL
Trigger: GAGCTTCCACCTGGCCAGGGAGGACGGAGACTTTGACCTACTCCACATGGAGAGGCAACCATGTCTGGAAGTGACTATGCCTGAGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 90 bp CTCTCCATGTGGAGTAGGTCAAAGTCTCCGTCCTCCCTGGCCAGGTaGAAGCTCCAGAGGGACATGTTTCAGCTTAGTACAAGGTGGCTG +
Preference number: 1 (lower is better)
Translates to: LSMWSRSKSPSSLAR*KLQRDMFQLSTRWL
Trigger: CAGCCACCTTGTACTAAGCTGAAACATGTCCCTCTGGAGCTTCCACCTGGCCAGGGAGGACGGAGACTTTGACCTACTCCACATGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR GCA 90 bp GCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATaGATGTCTGGGAGGACCACAGCCCTGGTGTGGAGCACTGACAGG +
Preference number: 1 (lower is better)
Translates to: AYNCWEGSVNLWPFL*MSGRTTALVWSTDR
Trigger: CCTGTCAGTGCTCCACACCAGGGCTGTGGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR TCA 90 bp CTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCCTaGATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTG +
Preference number: 1 (lower is better)
Translates to: LRKCPFTLSLGGQSP*IWCAYNCWEGSVNL
Trigger: CAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR TCA 90 bp GGAACCAATATCAGGGGTGAGACAAATGTATTCCGAATTTCTCAGTaGAAGAACAAAAGCCACCCAACATCAATGCTCCTCTTCAAGTCT +
Preference number: 1 (lower is better)
Translates to: GTNIRGETNVFRISQ*KNKSHPTSMLLFKS
Trigger: AGACTTGAAGAGGAGCATTGATGTTGGGTGGCTTTTGTTCTTTCACTGAGAAATTCGGAATACATTTGTCTCACCCCTGATATTGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 90 bp TCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGACTACTaGGCGAACCACACTGCAAAAATGAAAACTAGCGTACACAATTTA +
Preference number: 1 (lower is better)
Translates to: SRSIQKGCLWHPQDY*ANHTAKMKTSVHNL
Trigger: TAAATTGTGTACGCTAGTTTTCATTTTTGCAGTGTGGTTCGCCCAGTAGTCTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCCAGCTTAGTACAAGGTaGCTGACACTACTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTQLSTR*LTLLLC
Trigger: GCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGGTTGCCTCTCCATGTaGAGTAGGTCAAAGTCTCCG +
Preference number: 2 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLGCLSM*SRSKSP
Trigger: CGGAGACTTTGACCTACTCCACATGGAGAGGCAACC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR TCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATTGTACATACTCCTCTaGACCCCCAAAAGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLLYILL*TPKSKG
Trigger: TCCCTTGCTTTTGGGGGTTCAGAGGAGTATGTACAA...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR GCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCCTCTGGAATCTAGAGTaGAGCCCTGGGGAACTCGTA +
Preference number: 2 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPLWNLE*SPGELV
Trigger: TACGAGTTCCCCAGGGCTGCACTCTAGATTCCAGAG...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTACCTGCCGCACCCTaGGACTCAGGCATAGTCACT +
Preference number: 2 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWLPAAP*DSGIVT
Trigger: AGTGACTATGCCTGAGTCCCAGGGTGCGGCAGGTAG...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR TCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGATTAGTACAAGGTGGCTaGCACTACTCCTCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRLVQGG*HYSSAG
Trigger: TCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAA...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR GCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTACTTCCAGACATGGTTaGCTCTCCATGTGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LLHYPLVVSLPESGVLIITSRHG*LSMWSR
Trigger: CCTACTCCACATGGAGAGGCAACCATGTCTGGAAGT...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR GCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCGCCACCCAACATCAATaGTCCTCTTCAAGTCTACCA +
Preference number: 2 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPATQHQ*SSSSLP
Trigger: TGGTAGACTTGAAGAGGAGCATTGATGTTGGGTGGC...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTCATCCACAAGACTACTaGGCGAACCACACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIHPQDY*ANHTAK
Trigger: TTTTGCAGTGTGGTTCGCCCAGTAGTCTTGTGGATG...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTCAGAAAGGATGTCTCTaGCATCCACAAGACTACTGG +
Preference number: 2 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIQKGCL*HPQDYW
Trigger: CCAGTAGTCTTGTGGATGCCAGAGACATCCTTTCTG...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTACCAAAGATGAGAATGTaGGGAATCTGCTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLPKMRM*GICCLH
Trigger: ATGAAGACAGCAGATTCCCCACATTCTCATCTTTGG...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CAA 90 bp AGACCTAAAGTTCCACTAAGAAGAGATGGGCAAACAATGGTTTCATaGAACAGGCCAAAGATGAGAATGTGGGGAATCTGCTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: RPKVPLRRDGQTMVS*NRPKMRMWGICCLH
Trigger: ATGAAGACAGCAGATTCCCCACATTCTCATCTTTGGCCTGTTCAATGAAACCATTGTTTGCCCATCTCTTCTTAGTGGAACTTTAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCTCCACTAAGAAGAGATaGGCAAACAATGGTTTCATT +
Preference number: 2 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSSTKKR*ANNGFI
Trigger: AATGAAACCATTGTTTGCCCATCTCTTCTTAGTGGA...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR TCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGACCACACTGCAAAAATaGAAACTAGCGTACACAATT +
Preference number: 2 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWTTLQK*KLAYTI
Trigger: AATTGTGTACGCTAGTTTTCATTTTTGCAGTGTGGT...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR TCA 72 bp GACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAGGTaGGGGCGCCCCACTCAGCCTGTACCCATCAAGAAG +
Preference number: 3 (lower is better)
Translates to: DTTPLQEEAGWR*GRPTQPVPIKK
Trigger: CTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR GCA 72 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATaGATGTCTGGGAGGACCACAGCCCTGGTGTGGAGC +
Preference number: 3 (lower is better)
Translates to: CWEGSVNLWPFL*MSGRTTALVWS
Trigger: GCTCCACACCAGGGCTGTGGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 72 bp GGCATAGTCACTTCCAGACATGGTTGCCTCTCCATGTaGAGTAGGTCAAAGTCTCCGTCCTCCCTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GIVTSRHGCLSM*SRSKSPSSLAR
Trigger: CCTGGCCAGGGAGGACGGAGACTTTGACCTACTCCACATGGAGAGGCAACCATGTCTGGAAGTGACTATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR GCA 72 bp CCCTGGGACTCAGGCATAGTCACTTCCAGACATGGTTaGCTCTCCATGTGGAGTAGGTCAAAGTCTCCGTCC +
Preference number: 3 (lower is better)
Translates to: PWDSGIVTSRHG*LSMWSRSKSPS
Trigger: GGACGGAGACTTTGACCTACTCCACATGGAGAGGCAACCATGTCTGGAAGTGACTATGCCTGAGTCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR TCA 72 bp TCCAGAGGGACATGTTTCAGCTTAGTACAAGGTGGCTaGCACTACTCCTCTGCAGGAAGAGGCTGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: SRGTCFSLVQGG*HYSSAGRGWLE
Trigger: CTCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTGAAACATGTCCCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGGAGCACTGACAGGTTaGACTTTCCACCAGAATTGC +
Preference number: 3 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTGALTG*TFHQNC
Trigger: GCAATTCTGGTGGAAAGTCAAACCTGTCAGTGCTCC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 72 bp GTCTTCATCTGTGAATGTTTCCTACCTGCCGCACCCTaGGACTCAGGCATAGTCACTTCCAGACATGGTTGC +
Preference number: 3 (lower is better)
Translates to: VFICECFLPAAP*DSGIVTSRHGC
Trigger: GCAACCATGTCTGGAAGTGACTATGCCTGAGTCCCAGGGTGCGGCAGGTAGGAAACATTCACAGATGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 72 bp TGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTaGCCATTCCTATGCATGTCTGGGAGGACCACAGCC +
Preference number: 3 (lower is better)
Translates to: CAYNCWEGSVNL*PFLCMSGRTTA
Trigger: GGCTGTGGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGACAAATAATCCAGCCATaGGTGACTCTGGAATCTAGA +
Preference number: 3 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGQIIQP*VTLESR
Trigger: TCTAGATTCCAGAGTCACCAATGGCTGGATTATTTG...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR TCA 72 bp TGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCCTaGATCTGGTGTGCTTATAATTGCTGGGAAGGCAGT +
Preference number: 3 (lower is better)
Translates to: CPFTLSLGGQSP*IWCAYNCWEGS
Trigger: ACTGCCTTCCCAGCAATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CCA 72 bp ATTCAGAAAGGATGTCTCTGGCATCCACAAGACTACTaGGCGAACCACACTGCAAAAATGAAAACTAGCGTA +
Preference number: 3 (lower is better)
Translates to: IQKGCLWHPQDY*ANHTAKMKTSV
Trigger: TACGCTAGTTTTCATTTTTGCAGTGTGGTTCGCCCAGTAGTCTTGTGGATGCCAGAGACATCCTTTCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR-3UTR CAA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCAAACAATGGTTTCATaGAACAGGCCAAAGATGAGA +
Preference number: 3 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWQTMVS*NRPKMR
Trigger: TCTCATCTTTGGCCTGTTCAATGAAACCATTGTTTG...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTAGCCGTCTTCGTCACTaGAGCCAGGGCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSSRLRH*SQGPCR
Trigger: CCTGCATGGGCCCTGGCTGCAGTGACGAAGACGGCT...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCCCTCCACGCGGAGGCTaGACTCGGTGTAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTPPRGG*TRCSPR
Trigger: GCGAGGGCTACACCGAGTTCAGCCTCCGCGTGGAGG...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTCGGTCATCAGGCAGCTaGTGGGAGAGCACTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSRSSGS*WESTPR
Trigger: ACGAGGAGTGCTCTCCCAGCAGCTGCCTGATGACCG...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTGGAGGGAGGAGCAGCTaGAAGTGTTACGCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSGGRSS*KCYAVA
Trigger: AGCTACCGCGTAACACTTTCAGCTGCTCCTCCCTCC...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGTGCTGCTCTCACGTTaGGAGGCTGCCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTVLLSR*EAARLA
Trigger: GGCCAGCCTGGCAGCCTCTCAACGTGAGAGCAGCAC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATCGCCACGCGACTCCTaGCCGAAGTGGTCCCGACGA +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGSPRDS*PKWSRR
Trigger: TCGTCGGGACCACTTCGGGCAGGAGTCGCGTGGCGA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGACAGGGCTGGAAGTCCTaGGTGTCAGGGCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGQGWKS*VSGQGT
Trigger: CGTCCCCTGCCCTGACACCCAGGACTTCCAGCCCTG...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGGGCCCATGCAGGGCTaGAAGTCCTGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTGPMQG*KSWVSG
Trigger: CCCTGACACCCAGGACTTCCAGCCCTGCATGGGCCC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATGCCCATGCCGCAGGTaGCGCTGCACTCGTCCCACT +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGCPCRR*RCTRPT
Trigger: AGTGGGACGAGTGCAGCGCCACCTGCGGCATGGGCA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATCACCCCGCTGTCGGTaGCAGCGTCCCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGSPRCR*QRPRES
Trigger: TGATTCCCTGGGACGCTGGCACCGACAGCGGGGTGA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGGGACCTCATGCCCATaGCGCAGGAGATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTGTSCP*RRRCCR
Trigger: CCTGCAGCATCTCCTGCGGCATGGGCATGAGGTCCC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTGTGATGTCTCGGCTTTaGACATGGAGCCATCTGCGG +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSVMSRL*TWSHLR
Trigger: CCGCAGATGGCTCCATGTGCAAAGCCGAGACATCAC...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTCTGACACTACTCCTCTaGAGGAAGAGGCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSLTLLL*RKRLAG
Trigger: TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAG...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGACAGTTTGGTGCATTCTaGCCAGGCCGTCCATGGGCG +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGQFGAF*PGRPWA
Trigger: CGCCCATGGACGGCCTGGTCAGAATGCACCAAACTG...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAAGCCCTCGCGCCGCGTaGCCTGGGCGCGCAGGATAC +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLSPRAA*PGRAGY
Trigger: GTATCCTGCGCGCCCAGGGCACGCGGCGCGAGGGCT...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGCTTCTTCATGCCCATaGCGCAGGTGGCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTASSCP*RRWRCT
Trigger: AGTGCAGCGCCACCTGCGGCATGGGCATGAAGAAGC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTCTACAACCTGGGAACTaGTCCCCTTCAGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSLQPGN*SPSDSS
Trigger: GGAAGAGTCTGAAGGGGAGCAGTTCCCAGGTTGTAG...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCTGCCTTTGTCACAGGTaGAGGAGCTGCAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTCLCHR*RSCRRT
Trigger: GGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCA...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTGATGGTGTGGCACTCTaGCATCATGCACTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSDGVAL*HHALLC
Trigger: GCAGAGAAGTGCATGATGCCAGAGTGCCACACCATC...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATCCTCCCTGGCCAGGTaGAAGCTCCAGAGGGACATG +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGSSLAR*KLQRDM
Trigger: CATGTCCCTCTGGAGCTTCCACCTGGCCAGGGAGGA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTATGCACTTCTCCACCTaGTCCAGATCCTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSMHFST*SRSSLQ
Trigger: CTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGCAT...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAAGTCTCTGGGCAGGGTaGACCTCCAAACTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGSLWAG*TSKLRL
Trigger: GAGCCTCAGTTTGGAGGTGCACCCTGCCCAGAGACT...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCCTCCGCACAGTTTGGTaGATTCTGACCAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTLRTVW*ILTRPS
Trigger: GGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAG...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGAGAGGCTGCCAGGCTaGCCATTGGGCTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTERLPG*PLGFGF
Trigger: AAAGCCAAAGCCCAATGGCCAGCCTGGCAGCCTCTC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGAGAGCACTCCTCGTTaGCCGTGCACTTCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTESTPR*PCTSPF
Trigger: AAACGGAGAAGTGCACGGTCAACGAGGAGTGCTCTC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTAGGGTGGCTTGTCCTTaGTTAGGAATCACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSRVACP*LGITSL
Trigger: TAAGCTGGTGATTCCTAATCAAGGACAAGCCACCCT...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTGCGACTCGGAGACCGTaGCCGCCTCGGCTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIATRRP*PPRLGG
Trigger: GCCGCCAAGCCGAGGCGGGCACGGTCTCCGAGTCGC...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGCCTCAGTGGGCAGCGTaGACACGGAGCCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKPQWAA*TRSRPP
Trigger: CGGAGGACGGCTCCGTGTGCACGCTGCCCACTGAGG...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGAGGGAGCTCGGAGCTaGCGTCCGCGACTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLEGARS*RPRLGD
Trigger: GTCTCCGAGTCGCGGACGCCAGCTCCGAGCTCCCTC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGATCGCGCCGCGTGCCCTaGGCGCGCAGGATACGGCTG +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRSRRVP*ARRIRL
Trigger: CAGCCGTATCCTGCGCGCCCAGGGCACGCGGCGCGA...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGCAGCCTGTTCCCGCTaGTGGTGCTATCCAAAACAC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTAACSR*WCYPKH
Trigger: GTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCTGCCAGGCTGGCCATTaGGCTTTGGCTTTGATGACG +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTCQAGH*ALALMT
Trigger: CGTCATCAAAGCCAAAGCCCAATGGCCAGCCTGGCA...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGCGCATCCTACAACCTaGGAACTGCTCCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTAHPTT*ELLPFR
Trigger: TCTGAAGGGGAGCAGTTCCCAGGTTGTAGGATGCGC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGTGGAGTGCTTTCAGTaGCTGCAACAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTVECFQ*LQQGNC
Trigger: GCAATTGCCCTGTTGCAGTCACTGAAAGCACTCCAC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTCGGCCCCCAACTTTGTaGCGCGGCCGCAGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIRPPTL*RGRRPS
Trigger: CGAAGGCCTGCGGCCGCGGCACAAAGTTGGGGGCCG...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTTGCCGCAGGTGGCGCTaGACTCGTCCCACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIICRRWR*TRPTRP
Trigger: GGGGCGAGTGGGACGAGTGCAGCGCCACCTGCGGCA...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGGTGCCGCTTCTTCATaGCCATGCCGCAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLGAASS*PCRRWR
Trigger: GCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCAAGCATGGGATGGTGTaGCACTCTGGCATCATGCAC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTKHGMV*HSGIMH
Trigger: GTGCATGATGCCAGAGTGCCACACCATCCCATGCTT...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCTTACATTCCGACCACTaGGACCACTCGGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTLHSDH*DHSVSS
Trigger: TGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAA...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCTCCCGCAGGTCACGCTaGAGTCACTCCACTCGGACC +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSSRRSR*SHSTRT
Trigger: GGTCCGAGTGGAGTGACTGCAGCGTGACCTGCGGGA...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGGACGAAGGCGCGACCTaGCGGAGGCGCGGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWDEGAT*RRRGGE
Trigger: CTCTCCGCCGCGCCTCCGCCAGGTCGCGCCTTCGTC...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCACCATGGGGACCAGTTaGAGTAGATGCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTTMGTS*SRCRFQ
Trigger: CTGAAACCTGCATCTACTCCAACTGGTCCCCATGGT...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGACAGCTTAGTACAAGGTaGCTGACACTACTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGQLSTR*LTLLLC
Trigger: GCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CAA 72 bp GGAGGACCACAGCCCTGGTGTGGAGCACTGACAGGTTaGACTTTCCACCAGAATTGCTTGCTCAGCTTAATC +
Preference number: 4 (lower is better)
Translates to: GGPQPWCGALTG*TFHQNCLLSLI
Trigger: GATTAAGCTGAGCAAGCAATTCTGGTGGAAAGTCAAACCTGTCAGTGCTCCACACCAGGGCTGTGGTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTACGCGCAGGATACGGCTaGAGTAGCCCTCTGACTTGG +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLRAGYG*SSPLTW
Trigger: CCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCG...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCCTCACGTTGAGAGGCTaGCAGGCTGGCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSLTLRG*QAGHWA
Trigger: AGCCCAATGGCCAGCCTGGCAGCCTCTCAACGTGAG...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCTTGTTCACCCTTCCGTaGGATTCTCTCGATGACAAC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTLFTLP*DSLDDN
Trigger: GTTGTCATCGAGAGAATCGCACGGAAGGGTGAACAA...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTGACTCCTGCCCGAAGTaGTCCCGACGAAGGCGCGAC +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIDSCPK*SRRRRD
Trigger: GTCGCGCCTTCGTCGGGACCACTTCGGGCAGGAGTC...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGCCGGGTCCTCCTCCGTaGAGTGCTTTCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKPGPPP*SAFSDC
Trigger: GCAGTCACTGAAAGCACTCCACGGAGGAGGACCCGG...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGACACAGCAGTCTAAGATaGGTTTGTCAGTCACCCCAT +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGHSSLR*VCQSPH
Trigger: ATGGGGTGACTGACAAACCCATCTTAGACTGCTGTG...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTACTCTGGCTACTTGAGTaGTGGACCCACCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLLWLLE*WTHPLG
Trigger: ACCCAGAGGGTGGGTCCATCACTCAAGTAGCCAGAG...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCTGCAGGGCGACCAGGTaGTCCACTCGGACATGGTGC +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPCRATR*STRTWC
Trigger: GCACCATGTCCGAGTGGATCACCTGGTCGCCCTGCA...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGTTCTGCCAGAGACTTaGGCATCCGCTGTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLVLPET*ASAVGF
Trigger: GAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAAC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGCTGATGGACCCAACTaGGAAAATGTCCTTTTACAC +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTADGPN*ENVLLH
Trigger: GTGTAAAAGGACATTTTCTCAGTTGGGTCCATCAGC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGGCTGAGGTCCAGCTGTaGTTTCAGCATGCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKAEVQL*FQHALS
Trigger: CGACAGCGCATGCTGAAAGCACAGCTGGACCTCAGC...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATCCACTCGGACATGGTaGAGGTGGAGCCGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLSTRTW*RWSRLR
Trigger: ACGAAGACGGCTCCACCTGCACCATGTCCGAGTGGA...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCTCTCCCGGGACCTCATaGCCATGCCGCAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPSPGTS*PCRRRC
Trigger: GCATCTCCTGCGGCATGGGCATGAGGTCCCGGGAGA...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCGACTCTTCCTTCAGCTaGTCACTCCGCCGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSDSSFS*SLRRLS
Trigger: AGAGAGCCGGCGGAGTGAGCAGCTGAAGGAAGAGTC...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGTCGCAGACCAGTGGTTaGCCCGACGAGGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKSQTSG*PDEGNP
Trigger: AGGATTACCCTCGTCGGGCCAACCACTGGTCTGCGA...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCACTGGGACCACTCGGTaGGCTCACAGTCAATGGGGC +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPTGTTR*AHSQWG
Trigger: GCCCCATTGACTGTGAGCTCACCGAGTGGTCCCAGT...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGCAGGGAATCAGGTCTTaGACCACCTTCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKQGIRS*TTFWTQ
Trigger: CTGGGTCCAGAAGGTGGTGCAAGACCTGATTCCCTG...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCTGTCAGGTACAATATTaGATTGTTCACCCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTCQVQY*IVHPSV
Trigger: CACGGAAGGGTGAACAATGCAATATTGTACCTGACA...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTCCGTCCTCCGGGAACTaGTTCACATACCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIPSSGN*FTYLSR
Trigger: CCGGGAGAGGTATGTGAAGCAGTTCCCGGAGGACGG...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGGCTGTCGGGTTCGCATaGCCTTCCCGCAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWAVGFA*PSRRSR
Trigger: GCGTGACCTGCGGGAAGGGCATGCGAACCCGACAGC...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGGCATTCAGGGAGCATaGACTTCTCCACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLGIQGA*TSPPAP
Trigger: TGGAGCAGGTGGAGAAGTGCATGCTCCCTGAATGCC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAAGGATGAACATTGCATaGTCTGATCTCCTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGRMNIA*SDLLLV
Trigger: GACAAGAAGGAGATCAGAGCATGCAATGTTCATCCT...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCGCTATCCAAAACACCTaGATCCGGGTCCTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSAIQNT*IRVLLR
Trigger: ACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGC...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGATCTCCGTTTCCTCAGTaGGCAGCGTGCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRSPFPQ*AACTRS
Trigger: GCTCCGTGTGCACGCTGCCCACTGAGGAAACGGAGA...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCACTCCACTCGGACCATaGGGACAGCAAGCATGGGAT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSTPLGP*GQQAWD
Trigger: ATCCCATGCTTGCTGTCCCCATGGTCCGAGTGGAGT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAAGCGTAGCTTTTGGATaGATGGATTTCGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGSVAFG*MDFEGI
Trigger: AATGCCTTCGAAATCCATCCATCCAAAAGCTACGCT...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAACCACAGCCCTGGTGTaGAGCACTGACAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLTTALV*STDRFD
Trigger: GTCAAACCTGTCAGTGCTCCACACCAGGGCTGTGGT...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGAGGAGGACCACAGCCCTaGTGTGGAGCACTGACAGGT +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRGGPQP*CGALTG
Trigger: ACCTGTCAGTGCTCCACACCAGGGCTGTGGTCCTCC...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTAGTGGGATCCTCCGATaGTCGCAGACCAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIISGILR*SQTSGW
Trigger: CCAACCACTGGTCTGCGATCATCGGAGGATCCCACT...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAACAACTCTGGCTACTTaGGTGATGGACCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLTTLAT*VMDPPS
Trigger: AGAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGT...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTCTGCGGGGTTCATCTTaGTCATGCGGTGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIILRGSS*SCGAAS
Trigger: AGAAGCGGCACCGCATGATCAAGATGAACCCCGCAG...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGGTGCACCTCCAAACTaGGGCTCCATTTGGATCATC +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLGAPPN*GSIWII
Trigger: GATGATCCAAATGGAGCCTCAGTTTGGAGGTGCACC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCAACCAATATCAGGGGTaGGACAAATGTATTCCGAAT +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTNQYQG*DKCIPN
Trigger: ATTCGGAATACATTTGTCTCACCCCTGATATTGGTT...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGGGCACTCTGGCATCATaGACTTCTCTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKGTLAS*TSLPVM
Trigger: CATCACAGGCAGAGAAGTGCATGATGCCAGAGTGCC...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCGAGGATGGTCCAGGCTaGTCAGGGGCCGGATTTTCT +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPEDGPG*SGAGFS
Trigger: AGAAAATCCGGCCCCTGACCAGCCTGGACCATCCTC...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGAGCTGCAGGCGGACCATaGGGACCAGTTGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRAAGGP*GPVGVD
Trigger: ATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGC...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGCGGGTTCGAATCACGTaGCCTTTCCCACATGACTTG +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKRVRIT*PFPHDL
Trigger: CAAGTCATGTGGGAAAGGCCACGTGATTCGAACCCG...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCGGTTGCCTCTCCATGTaGAGTAGGTCAAAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSGCLSM*SRSKSP
Trigger: CGGAGACTTTGACCTACTCCACATGGAGAGGCAACC...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTCTACCTGCCGCACCCTaGGACTCAGGCATAGTCACT +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIILPAAP*DSGIVT
Trigger: AGTGACTATGCCTGAGTCCCAGGGTGCGGCAGGTAG...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCAATGTGGATGTAAATTaGATCACAGCTGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTNVDVN*ITAGLA
Trigger: TGCCAAACCAGCTGTGATCCAATTTACATCCACATT...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCGTGCGATTCTCTCGATaGCAACTCTGGCTACTTGAG +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSVRFSR*QLWLLE
Trigger: CTCAAGTAGCCAGAGTTGTCATCGAGAGAATCGCAC...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGGTGGCCTTTCCCACATaGCTTGTTACATTCCGACCA +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKVAFPT*LVTFRP
Trigger: TGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCAC...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCACCACACTGCAAAAATaGAAACTAGCGTACACAATT +
Preference number: 4 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTTTLQK*KLAYTI
Trigger: AATTGTGTACGCTAGTTTTCATTTTTGCAGTGTGGT...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGTTAGTACAAGGTGGCTaGCACTACTCCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKLVQGG*HYSSAG
Trigger: TCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAA...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGTGTTCCCGCTGGTGGTaGTATCCAAAACACCTGGAT +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKCSRWW*YPKHLD
Trigger: ATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACA...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGCTCCAGATCCTCATTaGAGTCTCCAAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLAPDPH*SLQVLP
Trigger: TGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCACTTCCAGACATGGTTaGCTCTCCATGTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSTSRHG*LSMWSR
Trigger: CCTACTCCACATGGAGAGGCAACCATGTCTGGAAGT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCTGGAAGGTCCCAGCATaGTCTTCTTCCTTATCACCC +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSWKVPA*SSSLSP
Trigger: GGGTGATAAGGAAGAAGACCATGCTGGGACCTTCCA...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCGCCTGTTCCCGCTGGTaGTGCTATCCAAAACACCTG +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPACSRW*CYPKHL
Trigger: CAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGC...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGACGAGGGTAATCCTTTaGGTGTGTCTTCTCGGACCA +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKTRVIL*VCLLGP
Trigger: TGGTCCGAGAAGACACACCCAAAGGATTACCCTCGT...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGAATGGTGGGTTTGTTaGGTGACTCATAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLEWWVC*VTHRSP
Trigger: GGGTGACCTATGAGTCACCCAACAAACCCACCATTC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCGGACATGGTGCAGGTaGAGCCGTCTTCGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWRTWCR*SRLRHC
Trigger: GCAGTGACGAAGACGGCTCCACCTGCACCATGTCCG...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGATCTAGAGTGCAGCCCTaGGGAACTCGTACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRSRVQP*GTRTLA
Trigger: AGCAAGGGTACGAGTTCCCCAGGGCTGCACTCTAGA...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCAGTCACTTCCAGACATaGTTGCCTCTCCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSSHFQT*LPLHVE
Trigger: CTCCACATGGAGAGGCAACCATGTCTGGAAGTGACT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCATTCTGCAACTTGTTTaGCGCCTTCGCTGGCATATC +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSILQLV*RLRWHI
Trigger: GATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAAT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTGCACTTCTCTGCCTGTaGTGTCTCGGCTTTGCACAT +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIALLCL*CLGFAH
Trigger: ATGTGCAAAGCCGAGACATCACAGGCAGAGAAGTGC...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCGGTGGTCAGTCTCCCTaGATCTGGTGTGCTTATAAT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSGGQSP*IWCAYN
Trigger: ATTATAAGCACACCAGATTCAGGGAGACTGACCACC...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTTGGCAAGGTGACCAGTaGGTGACCCAATGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIWQGDQ*VTQCLV
Trigger: AACCAGACATTGGGTCACTCACTGGTCACCTTGCCA...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGACTCTGGAATCTAGAGTaGAGCCCTGGGGAACTCGTA +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRLWNLE*SPGELV
Trigger: TACGAGTTCCCCAGGGCTGCACTCTAGATTCCAGAG...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATCTTCGTCTATGATCTaGAAGGTCCCAGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLSSSMI*KVPAWS
Trigger: AGACCATGCTGGGACCTTCCAGATCATAGACGAAGA...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTTCTTGCACCACCTTCTaGACCCAGCCACATTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIISCTTF*TQPHSL
Trigger: CAAGGAATGTGGCTGGGTCCAGAAGGTGGTGCAAGA...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGAGATGGACCCACCCTCTaGGTCATAGAAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRDGPTL*VIERTL
Trigger: CAGAGTCCTTTCTATGACCCAGAGGGTGGGTCCATC...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCCTCCAGCGTAGCTTTTaGATGGATGGATTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSLQRSF*MDGFRR
Trigger: CCTTCGAAATCCATCCATCCAAAAGCTACGCTGGAG...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAGGCAGTGTAAACCTGTaGCCATTCCTATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLGSVNL*PFLCMS
Trigger: AGACATGCATAGGAATGGCCACAGGTTTACACTGCC...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATATGGCAGTTTTTACTaGGTGTCTAATACTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGYGSFY*VSNTLF
Trigger: AAAGAGAGTATTAGACACCCAGTAAAAACTGCCATA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATACAACTTCTTTATATaGCAGTTTTTACTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGYNFFI*QFLLGV
Trigger: GACACCCAGTAAAAACTGCCATATAAAGAAGTTGTA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTCTCCATTTTCACGGGTaGGCCCAATTCTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIILHFHG*AQFCNL
Trigger: CAAGTTGCAGAATTGGGCTCACCCGTGAAAATGGAG...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGACACGGAAAATTCAGCTaGAGGTGCTGCTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRHGKFS*RCCSHV
Trigger: AACGTGAGAGCAGCACCTTCAGCTGAATTTTCCGTG...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCGACCAAATACAAACATaGGACACTAGGGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSDQIQT*DTRVAC
Trigger: ACAAGCCACCCTAGTGTCTCATGTTTGTATTTGGTC...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCAGTGCTTTCAGTGACTaGAACAGGGCAATTGCTCAT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSSAFSD*NRAIAH
Trigger: ATGAGCAATTGCCCTGTTGCAGTCACTGAAAGCACT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGGCTGTCGCATCCTCTTaGCTTTGTCACAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWAVASS*LCHRWR
Trigger: CCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGC...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGGCTGTGCTTTCAGCATaGGCTGTCGCATCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWAVLSA*AVASSC
Trigger: GCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGC...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTATCTTGATCATGCGGTaGCGCTTCTTCATGCCCATG +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIILIMR*RFFMPM
Trigger: CATGGGCATGAAGAAGCGGCACCGCATGATCAAGAT...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGGGAACTATTGATGACTaGGGAGACTTGAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKGTIDD*GDLKRD
Trigger: GTCTCTTTTCAAGTCTCCTCAGTCATCAATAGTTCC...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCAGGAAGAAAAACTGCTaGTGGACCCAACTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSRKKNC*WTQLRK
Trigger: TTTTCTCAGTTGGGTCCATCAGCAGTTTTTCTTCCT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGAAGGTGACCAGTGAGTaGCCCAATGTCTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWKVTSE*PNVWLG
Trigger: TCCCAACCAGACATTGGGTCACTCACTGGTCACCTT...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCACTTTCCACCAGAATTaGTTGCTCAGCTTAATCCCA +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSTFHQN*LLSLIP
Trigger: TGGGATTAAGCTGAGCAAGCAATTCTGGTGGAAAGT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCTCCCTTCTAATAAAATaGACTGGCAAGGTGACCAGT +
Preference number: 4 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSSLLIK*TGKVTS
Trigger: ACTGGTCACCTTGCCAGTGCATTTTATTAGAAGGGA...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGGTGTTACGCGGTAGCTaGTTCCCGGCTTGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWVLRGS*FPACRS
Trigger: ACTTCTACAAGCCGGGAACCAGCTACCGCGTAACAC...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTAGGAAGGACATTAAATaGCGCGTTCTGTCCACGGAA +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIRKDIK*RVLSTE
Trigger: TTCCGTGGACAGAACGCGCCATTTAATGTCCTTCCT...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTTTTTCTCCTGGGGAATaGTGGGTTTGTTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIFSPGE*WVCWVT
Trigger: AGTCACCCAACAAACCCACCATTCCCCAGGAGAAAA...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGACAGAAAGGATGTCTCTaGCATCCACAAGACTACTGG +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRQKGCL*HPQDYW
Trigger: CCAGTAGTCTTGTGGATGCCAGAGACATCCTTTCTG...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGCCAAAGATGAGAATGTaGGGAATCTGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKPKMRM*GICCLH
Trigger: ATGAAGACAGCAGATTCCCCACATTCTCATCTTTGG...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCTACACTATCCCTTGGTaGTCAGTCTCCCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPYTIPW*SVSLNL
Trigger: CAGATTCAGGGAGACTGACCACCAAGGGATAGTGTA...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGACAACATTGCAAAAGTaGGTGCTTCTACATGAGGAC +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKTTLQK*VLLHED
Trigger: GTCCTCATGTAGAAGCACCCACTTTTGCAATGTTGT...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
3UTR CAA 72 bp GTTCCACTAAGAAGAGATGGGCAAACAATGGTTTCATaGAACAGGCCAAAGATGAGAATGTGGGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: VPLRRDGQTMVS*NRPKMRMWGIC
Trigger: GCAGATTCCCCACATTCTCATCTTTGGCCTGTTCAATGAAACCATTGTTTGCCCATCTCTTCTTAGTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGCCACATTCCTTGGTaGACAGATCTTCTGCAGATA +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPSHIPW*TDLLQI
Trigger: TATCTGCAGAAGATCTGTGCACCAAGGAATGTGGCT...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGGCACATGGAGCCATCTaGGGGGTTCATCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWAHGAI*GVHLDH
Trigger: ATGATCAAGATGAACCCCGCAGATGGCTCCATGTGC...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGCATTGCAAAAGTGGGTaGTTCTACATGAGGACTTTT +
Preference number: 4 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKHCKSG*FYMRTF
Trigger: AAAAGTCCTCATGTAGAAGCACCCACTTTTGCAATG...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGTTGTACATACTCCTCTaGACCCCCAAAAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWLYILL*TPKSKG
Trigger: TCCCTTGCTTTTGGGGGTTCAGAGGAGTATGTACAA...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR TCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGTGGGAAATCTCTCTCTaGACTTCTTGCTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWWEISL*TSCCWT
Trigger: GGTCCAACAGCAAGAAGTTCAGAGAGAGATTTCCCA...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGACCAGTTGGAGTAGATaGAGGTTTCAGGGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWTSWSR*RFQGCH
Trigger: ATGACACCCCTGAAACCTGCATCTACTCCAACTGGT...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCTGGTGTGCTTATAATTaGTGGGAAGGCAGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPWCAYN*WEGSVN
Trigger: GTTTACACTGCCTTCCCAGCAATTATAAGCACACCA...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCGTTCACAAAGTTTCTTaGTCAGAGAGCCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPVHKVS*SESPHL
Trigger: AAGATGAGGGCTCTCTGACCAAGAAACTTTGTGAAC...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCATCCACAAGACTACTaGGCGAACCACACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWHPQDY*ANHTAK
Trigger: TTTTGCAGTGTGGTTCGCCCAGTAGTCTTGTGGATG...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTTGTGCTTATAATTGCTaGGAAGGCAGTGTAAACCTG +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIICAYNC*EGSVNL
Trigger: CAGGTTTACACTGCCTTCCCAGCAATTATAAGCACA...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGATTTTACACTATCCCTTaGTGGTCAGTCTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRFYTIP*WSVSLN
Trigger: ATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAA...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR GCA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGAAGCTTAGAACAACATTaGAAAAGTGGGTGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRSLEQH*KSGCFY
Trigger: GTAGAAGCACCCACTTTTGCAATGTTGTTCTAAGCT...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTTCACCCCATCAAATGTaGAATCTTGTTCACAAAGTT +
Preference number: 4 (lower is better)
Translates to: LLHYPLVVSLPESGVLIISPHQM*NLVHKV
Trigger: AACTTTGTGAACAAGATTCCACATTTGATGGGGTGA...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCTCCACTAAGAAGAGATaGGCAAACAATGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPSTKKR*ANNGFI
Trigger: AATGAAACCATTGTTTGCCCATCTCTTCTTAGTGGA...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CCA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTTACTGTCTCAAGTaGAAGTCCAAACAAATTTCA +
Preference number: 4 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWLYCLK*KSKQIS
Trigger: TGAAATTTGTTTGGACTTCCACTTGAGACAGTAAAG...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp AGGCGCGACCTGGCGGAGGCGCGGCGGAGAGAGGGAGCTCGGAGCTaGCGTCCGCGACTCGGAGACCGTGCCCGCCTCGGCTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: RRDLAEARRREGARS*RPRLGDRARLGLAA
Trigger: GGCCGCCAAGCCGAGGCGGGCACGGTCTCCGAGTCGCGGACGCCAGCTCCGAGCTCCCTCTCTCCGCCGCGCCTCCGCCAGGTCGCGCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp CCCCCAACTTTGTGCCGCGGCCGCAGGCCTTCGCCACGCGACTCCTaGCCGAAGTGGTCCCGACGAAGGCGCGACCTGGCGGAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: PPTLCRGRRPSPRDS*PKWSRRRRDLAEAR
Trigger: CCGCGCCTCCGCCAGGTCGCGCCTTCGTCGGGACCACTTCGGGCAGGAGTCGCGTGGCGAAGGCCTGCGGCCGCGGCACAAAGTTGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp TTGTGCCGCGGCCGCAGGCCTTCGCCACGCGACTCCTGCCCGAAGTaGTCCCGACGAAGGCGCGACCTGGCGGAGGCGCGGCGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LCRGRRPSPRDSCPK*SRRRRDLAEARRRE
Trigger: CTCTCTCCGCCGCGCCTCCGCCAGGTCGCGCCTTCGTCGGGACCACTTCGGGCAGGAGTCGCGTGGCGAAGGCCTGCGGCCGCGGCACAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp TGGTTCCCGGCTTGTAGAAGTCGGGGTCGCCCTCCACGCGGAGGCTaGACTCGGTGTAGCCCTCGCGCCGCGTGCCCTGGGCGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: WFPACRSRGRPPRGG*TRCSPRAACPGRAG
Trigger: TCCTGCGCGCCCAGGGCACGCGGCGCGAGGGCTACACCGAGTTCAGCCTCCGCGTGGAGGGCGACCCCGACTTCTACAAGCCGGGAACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp GCGCCGCGTGCCCTGGGCGCGCAGGATACGGCTGCAGTAGCCCTCTaGCTTGGGCACTTTGTCCAGGGTCTCGTCGGAGAAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: APRALGAQDTAAVAL*LGHFVQGLVGEGQR
Trigger: GCGCTGGCCTTCTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCCAGGGCACGCGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp CGGTGTAGCCCTCGCGCCGCGTGCCCTGGGCGCGCAGGATACGGCTaGAGTAGCCCTCTGACTTGGGCACTTTGTCCAGGGTCTCGTCGG +
Preference number: 5 (lower is better)
Translates to: RCSPRAACPGRAGYG*SSPLTWALCPGSRR
Trigger: CCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCCAGGGCACGCGGCGCGAGGGCTACACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp GCGTGCCCTGGGCGCGCAGGATACGGCTGCAGTAGCCCTCTGACTTaGGCACTTTGTCCAGGGTCTCGTCGGAGAAGGCCAGCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: ACPGRAGYGCSSPLT*ALCPGSRRRRPAPR
Trigger: CCGCGGCGCTGGCCTTCTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCCAGGGCACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp GGCCCATGCAGGGCTGGAAGTCCTGGGTGTCAGGGCAGGGGACGCTaGGGTCCAGCTGTGCTTTCAGCATGCGCTGTCGCATCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: GPCRAGSPGCQGRGR*GPAVLSACAVASSC
Trigger: GCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGGACCTCAGCGTCCCCTGCCCTGACACCCAGGACTTCCAGCCCTGCATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp GTTTCCTCAGTGGGCAGCGTGCACACGGAGCCGTCCTCCGGGAACTaGTTCACATACCTCTCCCGGGACCTCATGCCCATGCCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: VSSVGSVHTEPSSGN*FTYLSRDLMPMPQE
Trigger: CTCCTGCGGCATGGGCATGAGGTCCCGGGAGAGGTATGTGAAGCAGTTCCCGGAGGACGGCTCCGTGTGCACGCTGCCCACTGAGGAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTGGTGCTGCTCTCACGTaGAGAGGCTGCCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSGAALT*RGCQAG
Trigger: GCCAGCCTGGCAGCCTCTCAACGTGAGAGCAGCACC...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp GCTTTGCACATGGAGCCATCTGCGGGGTTCATCTTGATCATGCGGTaGCGCTTCTTCATGCCCATGCCGCAGGTGGCGCTGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: ALHMEPSAGFILIMR*RFFMPMPQVALHSS
Trigger: GGACGAGTGCAGCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCATGTGCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp GTGATGTCTCGGCTTTGCACATGGAGCCATCTGCGGGGTTCATCTTaGTCATGCGGTGCCGCTTCTTCATGCCCATGCCGCAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: VMSRLCTWSHLRGSS*SCGAASSCPCRRWR
Trigger: GCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCATGTGCAAAGCCGAGACATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp CCTGCTCCAGATCCTCATTGCAGTCTCCAAGTTCTGCCAGAGACTTaGGCATCCGCTGTCGGGTTCGCATGCCCTTCCCGCAGGTCACGC +
Preference number: 5 (lower is better)
Translates to: PAPDPHCSLQVLPET*ASAVGFACPSRRSR
Trigger: GCGTGACCTGCGGGAAGGGCATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp GAATGGTGGGTTTGTTGGGTGACTCATAGGTCACCCCGCTGTCGGTaGCAGCGTCCCAGGGAATCAGGTCTTGCACCACCTTCTGGACCC +
Preference number: 5 (lower is better)
Translates to: EWWVCWVTHRSPRCR*QRPRESGLAPPSGP
Trigger: GGGTCCAGAAGGTGGTGCAAGACCTGATTCCCTGGGACGCTGGCACCGACAGCGGGGTGACCTATGAGTCACCCAACAAACCCACCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp CTGGAAGTCCTGGGTGTCAGGGCAGGGGACGCTGAGGTCCAGCTGTaGTTTCAGCATGCGCTGTCGCATCCTCTTGCCTTTGTCACAGGT +
Preference number: 5 (lower is better)
Translates to: LEVLGVRAGDAEVQL*FQHALSHPLAFVTG
Trigger: ACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGGACCTCAGCGTCCCCTGCCCTGACACCCAGGACTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp ATCCTACAACCTGGGAACTGCTCCCCTTCAGACTCTTCCTTCAGCTaGTCACTCCGCCGGCTCTCTCGGGCCTCCCTCCAGCGTAGCTTT +
Preference number: 5 (lower is better)
Translates to: ILQPGNCSPSDSSFS*SLRRLSRASLQRSF
Trigger: AAAGCTACGCTGGAGGGAGGCCCGAGAGAGCCGGCGGAGTGAGCAGCTGAAGGAAGAGTCTGAAGGGGAGCAGTTCCCAGGTTGTAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS GCA 90 bp TACGATGCTGGCCTTCAGAATCACGCAGCCTGTTCCCGCTGGTGGTaGTATCCAAAACACCTGGATCCGGGTCCTCCTCCGTGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: YDAGLQNHAACSRWW*YPKHLDPGPPPWSA
Trigger: AGCACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCCAGCATCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp GTGCTTTCAGCATGCGCTGTCGCATCCTCTTGCCTTTGTCACAGGTaGAGGAGCTGCAGGCGGACCATGGGGACCAGTTGGAGTAGATGC +
Preference number: 5 (lower is better)
Translates to: VLSACAVASSCLCHR*RSCRRTMGTSWSRC
Trigger: GCATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp GCACTTCTCCACCTGCTCCAGATCCTCATTGCAGTCTCCAAGTTCTaGCAGAGACTTGAGCATCCGCTGTCGGGTTCGCATGCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: ALLHLLQILIAVSKF*QRLEHPLSGSHALP
Trigger: GGGAAGGGCATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp TTGTACGATGCTGGCCTTCAGAATCACGCAGCCTGTTCCCGCTGGTaGTGCTATCCAAAACACCTGGATCCGGGTCCTCCTCCGTGGAGT +
Preference number: 5 (lower is better)
Translates to: LYDAGLQNHAACSRW*CYPKHLDPGPPPWS
Trigger: ACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCCAGCATCGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCTCGCGGCCCCCAACTTaGTGCCGCGGCCGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSSRPPT*CRGRRP
Trigger: AGGCCTGCGGCCGCGGCACAAAGTTGGGGGCCGCGA...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp AGAATCACGCAGCCTGTTCCCGCTGGTGGTGCTATCCAAAACACCTaGATCCGGGTCCTCCTCCGTGGAGTGCTTTCAGTGACTGCAACA +
Preference number: 5 (lower is better)
Translates to: RITQPVPAGGAIQNT*IRVLLRGVLSVTAT
Trigger: TGTTGCAGTCACTGAAAGCACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp TTTTTGTACGATGCTGGCCTTCAGAATCACGCAGCCTGTTCCCGCTaGTGGTGCTATCCAAAACACCTGGATCCGGGTCCTCCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: FLYDAGLQNHAACSR*WCYPKHLDPGPPPW
Trigger: CCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCCAGCATCGTACAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp CTGTCGGTGCCAGCGTCCCAGGGAATCAGGTCTTGCACCACCTTCTaGACCCAGCCACATTCCTTGGTGCACAGATCTTCTGCAGATAAG +
Preference number: 5 (lower is better)
Translates to: LSVPASQGIRSCTTF*TQPHSLVHRSSADK
Trigger: CTTATCTGCAGAAGATCTGTGCACCAAGGAATGTGGCTGGGTCCAGAAGGTGGTGCAAGACCTGATTCCCTGGGACGCTGGCACCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp CATCCTCTTGCCTTTGTCACAGGTGGAGGAGCTGCAGGCGGACCATaGGGACCAGTTGGAGTAGATGCAGGTTTCAGGGGTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: HPLAFVTGGGAAGGP*GPVGVDAGFRGVIF
Trigger: GAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAGGAGAGCACTCCTCGTaGACCGTGCACTTCTCCGTT +
Preference number: 5 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGGEHSS*TVHFSV
Trigger: AACGGAGAAGTGCACGGTCAACGAGGAGTGCTCTCC...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp GCATGGGATGGTGTGGCACTCTGGCATCATGCACTTCTCTGCCTGTaGTGTCTCGGCTTTGCACATGGAGCCATCTGCGGGGTTCATCTT +
Preference number: 5 (lower is better)
Translates to: AWDGVALWHHALLCL*CLGFAHGAICGVHL
Trigger: AAGATGAACCCCGCAGATGGCTCCATGTGCAAAGCCGAGACATCACAGGCAGAGAAGTGCATGATGCCAGAGTGCCACACCATCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp CATGTAACGTTCCTGAATTCCACCTCCGCACAGTTTGGTGCATTCTaGCCAGGCCGTCCATGGGCGCATCCTACAACCTGGGAACTGCTC +
Preference number: 5 (lower is better)
Translates to: HVTFLNSTSAQFGAF*PGRPWAHPTTWELL
Trigger: GAGCAGTTCCCAGGTTGTAGGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAACGTTACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CCA 90 bp TCTCTCGATGACAACTCTGGCTACTTGAGTGATGGACCCACCCTCTaGGTCATAGAAAGGACTCTGAGGATGGTCCAGGCTGGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SLDDNSGYLSDGPTL*VIERTLRMVQAGQG
Trigger: CCCCTGACCAGCCTGGACCATCCTCAGAGTCCTTTCTATGACCCAGAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGTCATCGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp CGAATCACGTGGCCTTTCCCACATGACTTGTTACATTCCGACCACTaGGACCACTCGGTGAGCTCACAGTCAATGGGGCATTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RITWPFPHDLLHSDH*DHSVSSQSMGHSGS
Trigger: GCTCCCTGAATGCCCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCACGTGATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGACGAGGGTAATCCTTaGGGTGTGTCTTCTCGGACC +
Preference number: 5 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTDEGNP*GVSSRT
Trigger: GGTCCGAGAAGACACACCCAAAGGATTACCCTCGTC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGCCCAATTCTGCAACTaGTTTGACGCCTTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTAQFCN*FDAFAG
Trigger: GCCAGCGAAGGCGTCAAACAAGTTGCAGAATTGGGC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGACAACTCTGGCTACTaGAGTGATGGACCCACCCTC +
Preference number: 5 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTDNSGY*SDGPTL
Trigger: GAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGTC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATGTGATGTCTCGGCTTaGCACATGGAGCCATCTGCG +
Preference number: 5 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGCDVSA*HMEPSA
Trigger: CGCAGATGGCTCCATGTGCAAAGCCGAGACATCACA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp CGCTGGTGGTGCTATCCAAAACACCTGGATCCGGGTCCTCCTCCGTaGAGTGCTTTCAGTGACTGCAACAGGGCAATTGCTCATAAACTG +
Preference number: 5 (lower is better)
Translates to: RWWCYPKHLDPGPPP*SAFSDCNRAIAHKL
Trigger: CAGTTTATGAGCAATTGCCCTGTTGCAGTCACTGAAAGCACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp AGGGAATCAGGTCTTGCACCACCTTCTGGACCCAGCCACATTCCTTaGTGCACAGATCTTCTGCAGATAAGCCTACGTTCCAGTCGGGAC +
Preference number: 5 (lower is better)
Translates to: RESGLAPPSGPSHIP*CTDLLQISLRSSRD
Trigger: GTCCCGACTGGAACGTAGGCTTATCTGCAGAAGATCTGTGCACCAAGGAATGTGGCTGGGTCCAGAAGGTGGTGCAAGACCTGATTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp CGAATCACGTGGCCTTTCCCACATGACTTGTTACATTCCGACCACTaGGACCACTCGGTGAGCTCACAGTCAATGGCTGGCAAGACACAG +
Preference number: 5 (lower is better)
Translates to: RITWPFPHDLLHSDH*DHSVSSQSMAGKTQ
Trigger: CTGTGTCTTGCCAGCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCACGTGATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCCATTGGGCTTTGGCTTaGATGACGGTGAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTHWALA*MTVRTS
Trigger: TGAGGTCCTCACCGTCATCAAAGCCAAAGCCCAATG...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTAGGTACAATATTGCATaGTTCACCCTTCCGTGCGAT +
Preference number: 5 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSRYNIA*FTLPCD
Trigger: ATCGCACGGAAGGGTGAACAATGCAATATTGTACCT...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp CTCCATTTGGATCATCCGGGTTCGAATCACGTGGCCTTTCCCACATaGCTTGTTACATTCCGACCACTGGGACCACTCGGTGAGCTCACA +
Preference number: 5 (lower is better)
Translates to: LHLDHPGSNHVAFPT*LVTFRPLGPLGELT
Trigger: TGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCACGTGATTCGAACCCGGATGATCCAAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS GCA 90 bp AGCTCACAGTCAATGGGGCATTCAGGGAGCATGCACTTCTCCACCTaGTCCAGATCCTCATTGCAGTCTCCAAGTTCTGCCAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: SSQSMGHSGSMHFST*SRSSLQSPSSARDL
Trigger: CAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGCATGCTCCCTGAATGCCCCATTGACTGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp TTACAGTCATGTAACGTTCCTGAATTCCACCTCCGCACAGTTTGGTaGATTCTGACCAGGCCGTCCATGGGCGCATCCTACAACCTGGGA +
Preference number: 5 (lower is better)
Translates to: LQSCNVPEFHLRTVW*ILTRPSMGASYNLG
Trigger: TCCCAGGTTGTAGGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAACGTTACATGACTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS-3UTR CAA 90 bp AAGAGGCTGGCTGGAGGTGAGGGCGCCCCACTCAGCCTGTACCCATCAAGAAGTCTCTCTCTGAACTTCTaGCTGTTGGACCTAAAATGT +
Preference number: 5 (lower is better)
Translates to: KRLAGGEGAPLSLYPSRSLSLNF*LLDLKC
Trigger: ACATTTTAGGTCCAACAGCAAGAAGTTCAGAGAGAG...ACTTCTTGATGGGTACAGGCTGAGTGGGGCGCCCTCACCTCCAGCCAGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp CTCCATATTCCCACAGTACATAATTCTTGGAGTGGGATCCTCCGATaGTCGCAGACCAGTGGTTGGCCCGACGAGGGTAATCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LHIPTVHNSWSGILR*SQTSGWPDEGNPLG
Trigger: ACCCAAAGGATTACCCTCGTCGGGCCAACCACTGGTCTGCGATCATCGGAGGATCCCACTCCAAGAATTATGTACTGTGGGAATATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp TCTTTACAGTCATGTAACGTTCCTGAATTCCACCTCCGCACAGTTTaGTGCATTCTGACCAGGCCGTCCATGGGCGCATCCTACAACCTG +
Preference number: 5 (lower is better)
Translates to: SLQSCNVPEFHLRTV*CILTRPSMGASYNL
Trigger: CAGGTTGTAGGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAACGTTACATGACTGTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAAAACTGAGGCTCCATTaGGATCATCCGGGTTCGAAT +
Preference number: 5 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGKLRLH*DHPGSN
Trigger: ATTCGAACCCGGATGATCCAAATGGAGCCTCAGTTT...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAGACTTTCCACCAGAATaGCTTGCTCAGCTTAATCCC +
Preference number: 5 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGDFPPE*LAQLNP
Trigger: GGGATTAAGCTGAGCAAGCAATTCTGGTGGAAAGTC...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCCTTTTACACTATCCCTaGGTGGTCAGTCTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTLLHYP*VVSLPE
Trigger: TTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp ACATTCCGACCACTGGGACCACTCGGTGAGCTCACAGTCAATGGCTaGCAAGACACAGATGGGCATGAGTGTATCACATGTCTGAAACAA +
Preference number: 5 (lower is better)
Translates to: TFRPLGPLGELTVNG*QDTDGHECITCLKQ
Trigger: TTGTTTCAGACATGTGATACACTCATGCCCATCTGTGTCTTGCCAGCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS-3UTR CAA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGTCTGACTTGGGCACTTaGTCCAGGGTCTCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKSDLGT*SRVSSE
Trigger: CTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGA...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCGACCTCATCACTCTGTaGTCGAATTTCTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTDLITL*SNFFLH
Trigger: ATGGAGGAAGAAATTCGACAACAGAGTGATGAGGTC...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGGCTGGCCATTGGGCTTaGGCTTTGATGACGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKAGHWA*ALMTVR
Trigger: CCTCACCGTCATCAAAGCCAAAGCCCAATGGCCAGC...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTACTGCCAGGCTGGCCATaGGGCTTTGGCTTTGATGAC +
Preference number: 5 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLLPGWP*GFGFDD
Trigger: GTCATCAAAGCCAAAGCCCAATGGCCAGCCTGGCAG...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTACGCTGTCGCATCCTCTaGCCTTTGTCACAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLRCRIL*PLSQVE
Trigger: CTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCG...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 90 bp AGCCCTGGGGAACTCGTACCCTTGCTAACAAGGATGAACATTGCATaGTCTGATCTCCTTCTTGTCTTTGCAGCTGGTAAACTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: SPGELVPLLTRMNIA*SDLLLVFAAGKLGA
Trigger: AGCTCCCAGTTTACCAGCTGCAAAGACAAGAAGGAGATCAGAGCATGCAATGTTCATCCTTGTTAGCAAGGGTACGAGTTCCCCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS-3UTR CAA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAAGTTCTGCCAGAGACTaGAGCATCCGCTGTCGGGTT +
Preference number: 5 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLSSARD*SIRCRV
Trigger: AACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACT...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCATGTCTGGGAGGACCCAAATAATCCAGCCATaGGTGACTCTGGAATCTAGA +
Preference number: 5 (lower is better)
Translates to: CWEGSVNLWPFLCMSGRTQIIQP*VTLESR
Trigger: TCTAGATTCCAGAGTCACCAATGGCTGGATTATTTG...GGTCCTCCCAGACATGCATAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGACTGAACTTCTTGCTGTaGGACCTAAAATGTGGATGT +
Preference number: 5 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGLNFLL*DLKCGC
Trigger: ACATCCACATTTTAGGTCCAACAGCAAGAAGTTCAG...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp GGTAATCCTTTGGGTGTGTCTTCTCGGACCAATTCCCATAAAATGTaGGTCTGTACTTGGCAGTTCCGCAGGCACAGCAGTCTAAGATGG +
Preference number: 5 (lower is better)
Translates to: GNPLGVSSRTNSHKM*VCTWQFRRHSSLRW
Trigger: CCATCTTAGACTGCTGTGCCTGCGGAACTGCCAAGTACAGACTCACATTTTATGGGAATTGGTCCGAGAAGACACACCCAAAGGATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp GACCTCATCACTCTGTTGTCGAATTTCTTCCTCCATTTTCACGGGTaGGCCCAATTCTGCAACTTGTTTGACGCCTTCGCTGGCATATCC +
Preference number: 5 (lower is better)
Translates to: DLITLLSNFFLHFHG*AQFCNLFDAFAGIS
Trigger: GGATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAATTGGGCTCACCCGTGAAAATGGAGGAAGAAATTCGACAACAGAGTGATGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 90 bp CAAATAATCCAGCCATTGGTGACTCTGGAATCTAGAGTGCAGCCCTaGGGAACTCGTACCCTTGCTAACAAGGATGAACATTGCATGCTC +
Preference number: 5 (lower is better)
Translates to: QIIQPLVTLESRVQP*GTRTLANKDEHCML
Trigger: GAGCATGCAATGTTCATCCTTGTTAGCAAGGGTACGAGTTCCCCAGGGCTGCACTCTAGATTCCAGAGTCACCAATGGCTGGATTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS-3UTR CAA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGAATGTGAGTCTGTACTaGGCAGTTCCGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKNVSLY*AVPQAQ
Trigger: CTGTGCCTGCGGAACTGCCAAGTACAGACTCACATT...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGACCCAGCCACATTCCTaGGTGCACAGATCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKTQPHS*VHRSSA
Trigger: TGCAGAAGATCTGTGCACCAAGGAATGTGGCTGGGT...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCCCAGGGAATCAGGTCTaGCACCACCTTCTGGACCCA +
Preference number: 5 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPPGNQV*HHLLDP
Trigger: TGGGTCCAGAAGGTGGTGCAAGACCTGATTCCCTGG...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCCGCATCCTCTTGCCTTaGTCACAGGTGGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPRILLP*SQVEEL
Trigger: CAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCG...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATGCTCCAGATCCTCATaGCAGTCTCCAAGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLCSRSS*QSPSSA
Trigger: GGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCA...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGATCCTTTCCCTTAGATTaGTTTTCTGTCTCGGTAACT +
Preference number: 5 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGSFPLD*FSVSVT
Trigger: AGTTACCGAGACAGAAAACAAATCTAAGGGAAAGGA...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp CAGCTTAGTACAAGGTGGCTGACACTACTCCTCTGCAGGAAGAGGCTGGCTGGAAAGCCCTATCTTTTATaGAAAATGATGGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: QLSTRWLTLLLCRKRLAGKPYLL*KMMEVE
Trigger: CTCCACCTCCATCATTTTCAATAAAAGATAGGGCTT...TCCAGCCAGCCTCTTCCTGCAGAGGAGTAGTGTCAGCCACCTTGTACTAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp CGTGGAGTGCTTTCAGTGACTGCAACAGGGCAATTGCTCATAAACTaGGTTTCTTCTTCGTCTATGATCTGGAAGGTCCCAGCATGGTCT +
Preference number: 5 (lower is better)
Translates to: RGVLSVTATGQLLIN*VSSSSMIWKVPAWS
Trigger: AGACCATGCTGGGACCTTCCAGATCATAGACGAAGAAGAAACTCAGTTTATGAGCAATTGCCCTGTTGCAGTCACTGAAAGCACTCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TTCCTTTGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGTCTGCGGGGTTCATCTaGATCATGCGGTGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: FLCLGSNKDLVPKSSEGWSAGFI*IMRCRF
Trigger: GAAGCGGCACCGCATGATCAAGATGAACCCCGCAGA...CCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACAAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGATCTCCTTCTTGTCTTaGCAGCTGGTAAACTGGGAG +
Preference number: 5 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKISFLS*QLVNWE
Trigger: CTCCCAGTTTACCAGCTGCAAAGACAAGAAGGAGAT...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp TTTCTTCCTCCATTTTCACGGGTGAGCCCAATTCTGCAACTTGTTTaGCGCCTTCGCTGGCATATCCTCCATATTCCCACAGTACATAAT +
Preference number: 5 (lower is better)
Translates to: FLPPFSRVSPILQLV*RLRWHILHIPTVHN
Trigger: ATTATGTACTGTGGGAATATGGAGGATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAATTGGGCTCACCCGTGAAAATGGAGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTAAATTCTGCAACTTGTTaGACGCCTTCGCTGGCATAT +
Preference number: 5 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLNSATC*TPSLAY
Trigger: ATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAATT...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp CTTTTACACTATCCCTTGGTGGTCAGTCTCCCTGAATCTGGTGTGCTTATAATTGGAGCACTGACAGGTTaGACTTTCCACCAGAATTGC +
Preference number: 5 (lower is better)
Translates to: LLHYPLVVSLPESGVLIIGALTG*TFHQNC
Trigger: GCAATTCTGGTGGAAAGTCAAACCTGTCAGTGCTCC...AATTATAAGCACACCAGATTCAGGGAGACTGACCACCAAGGGATAGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATCTGGTGTGCTTATAATTGCTGGGAAGGCAGTGTAAACCTGTGGCCATTCCTATTGTCAGGTACAATATaGCATTGTTCACCCTTCCGT +
Preference number: 5 (lower is better)
Translates to: IWCAYNCWEGSVNLWPFLLSGTI*HCSPFR
Trigger: ACGGAAGGGTGAACAATGCAATATTGTACCTGACAA...TAGGAATGGCCACAGGTTTACACTGCCTTCCCAGCAATTATAAGCACACCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGAGGGGAACTCGTACCCTaGCTAACAAGGATGAACATT +
Preference number: 5 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRGELVP*LTRMNI
Trigger: AATGTTCATCCTTGTTAGCAAGGGTACGAGTTCCCC...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCAGTGTATTCAGAGCATaGTATGTGTCTCACCAATGG +
Preference number: 5 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSSVFRA*YVSHQW
Trigger: CCATTGGTGAGACACATACAATGCTCTGAATACACT...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 90 bp AACAAGATATGGTCACGCTCTCCTTTGAACATCTCAACAAGCCTATaGGGGATGCAAAGCAGGTGCTGTGTCATGCTATTTTACAGAAGA +
Preference number: 5 (lower is better)
Translates to: NKIWSRSPLNISTSL*GMQSRCCVMLFYRR
Trigger: TCTTCTGTAAAATAGCATGACACAGCACCTGCTTTGCATCCCTCATAGGCTTGTTGAGATGTTCAAAGGAGAGCGTGACCATATCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS-3UTR CAA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGATAAATAATGCGTTTTaGTACGATGCTGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKINNAF*YDAGLQ
Trigger: CTGAAGGCCAGCATCGTACAAAAACGCATTATTTAT...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGATGTTCACAAAGTTTCTaGGTCAGAGAGCCCTCATCT +
Preference number: 5 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRCSQSF*VREPSS
Trigger: AGATGAGGGCTCTCTGACCAAGAAACTTTGTGAACA...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCCAGTCTAAGATGGGTTaGTCAGTCACCCCATCAAAT +
Preference number: 5 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPQSKMG*SVTPSN
Trigger: ATTTGATGGGGTGACTGACAAACCCATCTTAGACTG...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp ATGGACCCAACTGAGAAAATGTCCTTTTACACTATCCCTTGGTGGTCAGTCTCCGTAAACTGGGAGCTTTaGAATCTCTTCTTTACAGTC +
Preference number: 5 (lower is better)
Translates to: MDPTEKMSFYTIPWWSVSVNWEL*NLFFTV
Trigger: GACTGTAAAGAAGAGATTCAAAAGCTCCCAGTTTAC...GGAGACTGACCACCAAGGGATAGTGTAAAAGGACATTTTCTCAGTTGGGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TCAGCCTGTACCCATCAAGAAGTATTCAGAAAGGATGTCTCTGGCATCCACAAGCAAACAATGGTTTCATaGAACAGGCCAAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: SACTHQEVFRKDVSGIHKQTMVS*NRPKMR
Trigger: TCTCATCTTTGGCCTGTTCAATGAAACCATTGTTTG...CTTGTGGATGCCAGAGACATCCTTTCTGAATACTTCTTGATGGGTACAGGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp TGTCTTGGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCCAGGTTTATTCCCATTaGCTACAACAGATTCCCTTC +
Preference number: 5 (lower is better)
Translates to: CLGSNKDLVPKSSEGWLPQVYSH*LQQIPF
Trigger: GAAGGGAATCTGTTGTAGCAAATGGGAATAAACCTG...GGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACCAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS-3UTR CAA 90 bp GGTTCCAATAAGGATTTAGTACCAAAAAGTTCAGAAGGCTGGCTTCCCAGAAGACCACCTAACAAGACTTaGGTAAGAAAGAGACTTGAT +
Preference number: 5 (lower is better)
Translates to: GSNKDLVPKSSEGWLPRRPPNKT*VRKRLD
Trigger: ATCAAGTCTCTTTCTTACCAAAGTCTTGTTAGGTGG...TCTTCTGGGAAGCCAGCCTTCTGAACTTTTTGGTACTAAATCCTTATTGGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp GGGAGCTCGGAGCTGGCGTCCGCGACTCGGAGACCGTaGCCGCCTCGGCTTGGCGGCCGCGGAGCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: GSSELASATRRP*PPRLGGRGAAL
Trigger: CAGCGCAGCTCCGCGGCCGCCAAGCCGAGGCGGGCACGGTCTCCGAGTCGCGGACGCCAGCTCCGAGCTCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp CTGGCGGAGGCGCGGCGGAGAGAGGGAGCTCGGAGCTaGCGTCCGCGACTCGGAGACCGTGCCCGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: LAEARRREGARS*RPRLGDRARLG
Trigger: GCCGAGGCGGGCACGGTCTCCGAGTCGCGGACGCCAGCTCCGAGCTCCCTCTCTCCGCCGCGCCTCCGCCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GGCCGCAGGCCTTCGCCACGCGACTCCTGCCCGAAGTaGTCCCGACGAAGGCGCGACCTGGCGGAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: GRRPSPRDSCPK*SRRRRDLAEAR
Trigger: CCGCGCCTCCGCCAGGTCGCGCCTTCGTCGGGACCACTTCGGGCAGGAGTCGCGTGGCGAAGGCCTGCGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp TTGTGCCGCGGCCGCAGGCCTTCGCCACGCGACTCCTaGCCGAAGTGGTCCCGACGAAGGCGCGACCTGGCG +
Preference number: 6 (lower is better)
Translates to: LCRGRRPSPRDS*PKWSRRRRDLA
Trigger: CGCCAGGTCGCGCCTTCGTCGGGACCACTTCGGGCAGGAGTCGCGTGGCGAAGGCCTGCGGCCGCGGCACAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp GCGCCGGGGACAGCCTCATCTTCGCGGCCCCCAACTTaGTGCCGCGGCCGCAGGCCTTCGCCACGCGACTCC +
Preference number: 6 (lower is better)
Translates to: APGTASSSRPPT*CRGRRPSPRDS
Trigger: GGAGTCGCGTGGCGAAGGCCTGCGGCCGCGGCACAAAGTTGGGGGCCGCGAAGATGAGGCTGTCCCCGGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp CCGGGGACAGCCTCATCTTCGCGGCCCCCAACTTTGTaGCGCGGCCGCAGGCCTTCGCCACGCGACTCCTGC +
Preference number: 6 (lower is better)
Translates to: PGTASSSRPPTL*RGRRPSPRDSC
Trigger: GCAGGAGTCGCGTGGCGAAGGCCTGCGGCCGCGGCACAAAGTTGGGGGCCGCGAAGATGAGGCTGTCCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp GCTTGTAGAAGTCGGGGTCGCCCTCCACGCGGAGGCTaGACTCGGTGTAGCCCTCGCGCCGCGTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: ACRSRGRPPRGG*TRCSPRAACPG
Trigger: CCCAGGGCACGCGGCGCGAGGGCTACACCGAGTTCAGCCTCCGCGTGGAGGGCGACCCCGACTTCTACAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp CCTCGCGCCGCGTGCCCTGGGCGCGCAGGATACGGCTaGAGTAGCCCTCTGACTTGGGCACTTTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PRAACPGRAGYG*SSPLTWALCPG
Trigger: CCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCCAGGGCACGCGGCGCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp GGTGCCGCTTCTTCATGCCCATGCCGCAGGTGGCGCTaGACTCGTCCCACTCGCCCCACTCGGTCATCAGGC +
Preference number: 6 (lower is better)
Translates to: GAASSCPCRRWR*TRPTRPTRSSG
Trigger: GCCTGATGACCGAGTGGGGCGAGTGGGACGAGTGCAGCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp CCGTCTTCGTCACTGCAGCCAGGGCCCATGCAGGGCTaGAAGTCCTGGGTGTCAGGGCAGGGGACGCTGAGG +
Preference number: 6 (lower is better)
Translates to: PSSSLQPGPMQG*KSWVSGQGTLR
Trigger: CCTCAGCGTCCCCTGCCCTGACACCCAGGACTTCCAGCCCTGCATGGGCCCTGGCTGCAGTGACGAAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp TCATGCGGTGCCGCTTCTTCATGCCCATGCCGCAGGTaGCGCTGCACTCGTCCCACTCGCCCCACTCGGTCA +
Preference number: 6 (lower is better)
Translates to: SCGAASSCPCRR*RCTRPTRPTRS
Trigger: TGACCGAGTGGGGCGAGTGGGACGAGTGCAGCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACCGCATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp CCGGGAACTGCTTCACATACCTCTCCCGGGACCTCATaGCCATGCCGCAGGAGATGCTGCAGGGCGACCAGG +
Preference number: 6 (lower is better)
Translates to: PGTASHTSPGTS*PCRRRCCRATR
Trigger: CCTGGTCGCCCTGCAGCATCTCCTGCGGCATGGGCATGAGGTCCCGGGAGAGGTATGTGAAGCAGTTCCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp GTGGGCAGCGTGCACACGGAGCCGTCCTCCGGGAACTaGTTCACATACCTCTCCCGGGACCTCATGCCCATG +
Preference number: 6 (lower is better)
Translates to: VGSVHTEPSSGN*FTYLSRDLMPM
Trigger: CATGGGCATGAGGTCCCGGGAGAGGTATGTGAAGCAGTTCCCGGAGGACGGCTCCGTGTGCACGCTGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp GCTGTCGGGTTCGCATGCCCTTCCCGCAGGTCACGCTaGAGTCACTCCACTCGGACCATGGGGACAGCAAGC +
Preference number: 6 (lower is better)
Translates to: AVGFACPSRRSR*SHSTRTMGTAS
Trigger: GCTTGCTGTCCCCATGGTCCGAGTGGAGTGACTGCAGCGTGACCTGCGGGAAGGGCATGCGAACCCGACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp CCTGGGAACTGCTCCCCTTCAGACTCTTCCTTCAGCTaGTCACTCCGCCGGCTCTCTCGGGCCTCCCTCCAG +
Preference number: 6 (lower is better)
Translates to: PGNCSPSDSSFS*SLRRLSRASLQ
Trigger: CTGGAGGGAGGCCCGAGAGAGCCGGCGGAGTGAGCAGCTGAAGGAAGAGTCTGAAGGGGAGCAGTTCCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS TCA 72 bp GCCCTGGGCGCGCAGGATACGGCTGCAGTAGCCCTCTaGCTTGGGCACTTTGTCCAGGGTCTCGTCGGAGAA +
Preference number: 6 (lower is better)
Translates to: ALGAQDTAAVAL*LGHFVQGLVGE
Trigger: TTCTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp AGGGCTGGAAGTCCTGGGTGTCAGGGCAGGGGACGCTaGGGTCCAGCTGTGCTTTCAGCATGCGCTGTCGCA +
Preference number: 6 (lower is better)
Translates to: RAGSPGCQGRGR*GPAVLSACAVA
Trigger: TGCGACAGCGCATGCTGAAAGCACAGCTGGACCTCAGCGTCCCCTGCCCTGACACCCAGGACTTCCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GGGCGCGCAGGATACGGCTGCAGTAGCCCTCTGACTTaGGCACTTTGTCCAGGGTCTCGTCGGAGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: GRAGYGCSSPLT*ALCPGSRRRRP
Trigger: TGGCCTTCTCCGACGAGACCCTGGACAAAGTGCCCAAGTCAGAGGGCTACTGCAGCCGTATCCTGCGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp CCCGCAGGTCACGCTGCAGTCACTCCACTCGGACCATaGGGACAGCAAGCATGGGATGGTGTGGCACTCTGG +
Preference number: 6 (lower is better)
Translates to: PAGHAAVTPLGP*GQQAWDGVALW
Trigger: CCAGAGTGCCACACCATCCCATGCTTGCTGTCCCCATGGTCCGAGTGGAGTGACTGCAGCGTGACCTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp CGGTCATCAGGCAGCTGCTGGGAGAGCACTCCTCGTTaGCCGTGCACTTCTCCGTTTCCTCAGTGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: RSSGSCWESTPR*PCTSPFPQWAA
Trigger: CGCTGCCCACTGAGGAAACGGAGAAGTGCACGGTCAACGAGGAGTGCTCTCCCAGCAGCTGCCTGATGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GCATGCGCTGTCGCATCCTCTTGCCTTTGTCACAGGTaGAGGAGCTGCAGGCGGACCATGGGGACCAGTTGG +
Preference number: 6 (lower is better)
Translates to: ACAVASSCLCHR*RSCRRTMGTSW
Trigger: CCAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp GGCCTTCAGAATCACGCAGCCTGTTCCCGCTGGTGGTaGTATCCAAAACACCTGGATCCGGGTCCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GLQNHAACSRWW*YPKHLDPGPPP
Trigger: CGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp CCAGCTGTGCTTTCAGCATGCGCTGTCGCATCCTCTTaGCTTTGTCACAGGTGGAGGAGCTGCAGGCGGACC +
Preference number: 6 (lower is better)
Translates to: PAVLSACAVASS*LCHRWRSCRRT
Trigger: GGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp CTGGGTGTCAGGGCAGGGGACGCTGAGGTCCAGCTGTaGTTTCAGCATGCGCTGTCGCATCCTCTTGCCTTT +
Preference number: 6 (lower is better)
Translates to: LGVRAGDAEVQL*FQHALSHPLAF
Trigger: AAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGGACCTCAGCGTCCCCTGCCCTGACACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp ATGGAGCCATCTGCGGGGTTCATCTTGATCATGCGGTaGCGCTTCTTCATGCCCATGCCGCAGGTGGCGCTG +
Preference number: 6 (lower is better)
Translates to: MEPSAGFILIMR*RFFMPMPQVAL
Trigger: CAGCGCCACCTGCGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 90 bp AGGTCCAGCTGTGCTTTCAGCATGCGCTGTCGCATCCTCTTGCCTTaGTCACAGGTGGAGGAGCTGCAGGCGGACCATGGGGACCAGTTG +
Preference number: 6 (lower is better)
Translates to: RSSCAFSMRCRILLP*SQVEELQADHGDQL
Trigger: CAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp CGGCTTTGCACATGGAGCCATCTGCGGGGTTCATCTTaGTCATGCGGTGCCGCTTCTTCATGCCCATGCCGC +
Preference number: 6 (lower is better)
Translates to: RLCTWSHLRGSS*SCGAASSCPCR
Trigger: GCGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCATGTGCAAAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp GTTTGTTGGGTGACTCATAGGTCACCCCGCTGTCGGTaGCAGCGTCCCAGGGAATCAGGTCTTGCACCACCT +
Preference number: 6 (lower is better)
Translates to: VCWVTHRSPRCR*QRPRESGLAPP
Trigger: AGGTGGTGCAAGACCTGATTCCCTGGGACGCTGGCACCGACAGCGGGGTGACCTATGAGTCACCCAACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp CAGCCTGTTCCCGCTGGTGGTGCTATCCAAAACACCTaGATCCGGGTCCTCCTCCGTGGAGTGCTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: QPVPAGGAIQNT*IRVLLRGVLSV
Trigger: CACTGAAAGCACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GCTGGCCTTCAGAATCACGCAGCCTGTTCCCGCTGGTaGTGCTATCCAAAACACCTGGATCCGGGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: AGLQNHAACSRW*CYPKHLDPGPP
Trigger: AGGAGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GCCTTTGTCACAGGTGGAGGAGCTGCAGGCGGACCATaGGGACCAGTTGGAGTAGATGCAGGTTTCAGGGGT +
Preference number: 6 (lower is better)
Translates to: AFVTGGGAAGGP*GPVGVDAGFRG
Trigger: ACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp CGCCGGCTCTCTCGGGCCTCCCTCCAGCGTAGCTTTTaGATGGATGGATTTCGAAGGCATTTTCGGATGCGG +
Preference number: 6 (lower is better)
Translates to: RRLSRASLQRSF*MDGFRRHFRMR
Trigger: CCGCATCCGAAAATGCCTTCGAAATCCATCCATCCAAAAGCTACGCTGGAGGGAGGCCCGAGAGAGCCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CAA 72 bp TGTGCTTTCAGCATGCGCTGTCGCATCCTCTTGCCTTaGTCACAGGTGGAGGAGCTGCAGGCGGACCATGGG +
Preference number: 6 (lower is better)
Translates to: CAFSMRCRILLP*SQVEELQADHG
Trigger: CCCATGGTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp TCCAGCTGTGCTTTCAGCATGCGCTGTCGCATCCTCTaGCCTTTGTCACAGGTGGAGGAGCTGCAGGCGGAC +
Preference number: 6 (lower is better)
Translates to: SSCAFSMRCRIL*PLSQVEELQAD
Trigger: GTCCGCCTGCAGCTCCTCCACCTGTGACAAAGGCAAGAGGATGCGACAGCGCATGCTGAAAGCACAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 90 bp TGTGATGTCTCGGCTTTGCACATGGAGCCATCTGCGGGGTTCATCTaGATCATGCGGTGCCGCTTCTTCATGCCCATGCCGCAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: CDVSALHMEPSAGFI*IMRCRFFMPMPQVA
Trigger: CGCCACCTGCGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCATGTGCAAAGCCGAGACATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 90 bp ACCTGCTCCAGATCCTCATTGCAGTCTCCAAGTTCTGCCAGAGACTaGAGCATCCGCTGTCGGGTTCGCATGCCCTTCCCGCAGGTCACG +
Preference number: 6 (lower is better)
Translates to: TCSRSSLQSPSSARD*SIRCRVRMPFPQVT
Trigger: CGTGACCTGCGGGAAGGGCATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp GATCCTCATTGCAGTCTCCAAGTTCTGCCAGAGACTTaGGCATCCGCTGTCGGGTTCGCATGCCCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: DPHCSLQVLPET*ASAVGFACPSR
Trigger: GCGGGAAGGGCATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GATGCTGGCCTTCAGAATCACGCAGCCTGTTCCCGCTaGTGGTGCTATCCAAAACACCTGGATCCGGGTCCT +
Preference number: 6 (lower is better)
Translates to: DAGLQNHAACSR*WCYPKHLDPGP
Trigger: AGGACCCGGATCCAGGTGTTTTGGATAGCACCACCAGCGGGAACAGGCTGCGTGATTCTGAAGGCCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GCTGCTCTCACGTTGAGAGGCTGCCAGGCTGGCCATTaGGCTTTGGCTTTGATGACGGTGAGGACCTCATCA +
Preference number: 6 (lower is better)
Translates to: AALTLRGCQAGH*ALALMTVRTSS
Trigger: TGATGAGGTCCTCACCGTCATCAAAGCCAAAGCCCAATGGCCAGCCTGGCAGCCTCTCAACGTGAGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp TCGGCTTTGCACATGGAGCCATCTGCGGGGTTCATCTaGATCATGCGGTGCCGCTTCTTCATGCCCATGCCG +
Preference number: 6 (lower is better)
Translates to: SALHMEPSAGFI*IMRCRFFMPMP
Trigger: CGGCATGGGCATGAAGAAGCGGCACCGCATGATCAAGATGAACCCCGCAGATGGCTCCATGTGCAAAGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp CTCTGGGCAGGGTGCACCTCCAAACTGAGGCTCCATTaGGATCATCCGGGTTCGAATCACGTGGCCTTTCCC +
Preference number: 6 (lower is better)
Translates to: LWAGCTSKLRLH*DHPGSNHVAFP
Trigger: GGGAAAGGCCACGTGATTCGAACCCGGATGATCCAAATGGAGCCTCAGTTTGGAGGTGCACCCTGCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CAA 90 bp GGGCATTCAGGGAGCATGCACTTCTCCACCTGCTCCAGATCCTCATaGCAGTCTCCAAGTTCTGCCAGAGACTTGAGCATCCGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: GHSGSMHFSTCSRSS*QSPSSARDLSIRCR
Trigger: CCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGCATGCTCCCTGAATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp TTCCTGAATTCCACCTCCGCACAGTTTGGTGCATTCTaGCCAGGCCGTCCATGGGCGCATCCTACAACCTGG +
Preference number: 6 (lower is better)
Translates to: FLNSTSAQFGAF*PGRPWAHPTTW
Trigger: CCAGGTTGTAGGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CCA 72 bp AGGTGGAGGAGCTGCAGGCGGACCATGGGGACCAGTTaGAGTAGATGCAGGTTTCAGGGGTGTCATCTTCAT +
Preference number: 6 (lower is better)
Translates to: RWRSCRRTMGTS*SRCRFQGCHLH
Trigger: ATGAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGCTCCTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GGCTCTCTCGGGCCTCCCTCCAGCGTAGCTTTTGGATaGATGGATTTCGAAGGCATTTTCGGATGCGGCACT +
Preference number: 6 (lower is better)
Translates to: GSLGPPSSVAFG*MDFEGIFGCGT
Trigger: AGTGCCGCATCCGAAAATGCCTTCGAAATCCATCCATCCAAAAGCTACGCTGGAGGGAGGCCCGAGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CAA 72 bp AGATCCTCATTGCAGTCTCCAAGTTCTGCCAGAGACTaGAGCATCCGCTGTCGGGTTCGCATGCCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: RSSLQSPSSARD*SIRCRVRMPFP
Trigger: CGGGAAGGGCATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp CACCTGCTCCAGATCCTCATTGCAGTCTCCAAGTTCTaGCAGAGACTTGAGCATCCGCTGTCGGGTTCGCAT +
Preference number: 6 (lower is better)
Translates to: HLLQILIAVSKF*QRLEHPLSGSH
Trigger: ATGCGAACCCGACAGCGGATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp TGTAACGTTCCTGAATTCCACCTCCGCACAGTTTGGTaGATTCTGACCAGGCCGTCCATGGGCGCATCCTAC +
Preference number: 6 (lower is better)
Translates to: CNVPEFHLRTVW*ILTRPSMGASY
Trigger: GTAGGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAACGTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CCA 72 bp TCATGTAACGTTCCTGAATTCCACCTCCGCACAGTTTaGTGCATTCTGACCAGGCCGTCCATGGGCGCATCC +
Preference number: 6 (lower is better)
Translates to: SCNVPEFHLRTV*CILTRPSMGAS
Trigger: GGATGCGCCCATGGACGGCCTGGTCAGAATGCACCAAACTGTGCGGAGGTGGAATTCAGGAACGTTACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CCA 72 bp TCAGCCCGTGTGGTTGGTAAGCAGCAGAGGCAGGATTaGTGCCAGGTCATCACCCATTCTATGCTCCCTCTA +
Preference number: 6 (lower is better)
Translates to: SARVVGKQQRQD*CQVITHSMLPL
Trigger: TAGAGGGAGCATAGAATGGGTGATGACCTGGCACCAATCCTGCCTCTGCTGCTTACCAACCACACGGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS CCA 72 bp TGGCCTTTCCCACATGACTTGTTACATTCCGACCACTaGGACCACTCGGTGAGCTCACAGTCAATGGCTGGC +
Preference number: 6 (lower is better)
Translates to: WPFPHDLLHSDH*DHSVSSQSMAG
Trigger: GCCAGCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS CAA 72 bp TTGAGAGGCTGCCAGGCTGGCCATTGGGCTTTGGCTTaGATGACGGTGAGGACCTCATCACTCTGTTGTCGA +
Preference number: 6 (lower is better)
Translates to: LRGCQAGHWALA*MTVRTSSLCCR
Trigger: TCGACAACAGAGTGATGAGGTCCTCACCGTCATCAAAGCCAAAGCCCAATGGCCAGCCTGGCAGCCTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 90 bp GCTCTCACGTTGAGAGGCTGCCAGGCTGGCCATTGGGCTTTGGCTTaGATGACGGTGAGGACCTCATCACTCTGTTGTCGAATTTCTTCC +
Preference number: 6 (lower is better)
Translates to: ALTLRGCQAGHWALA*MTVRTSSLCCRISS
Trigger: GGAAGAAATTCGACAACAGAGTGATGAGGTCCTCACCGTCATCAAAGCCAAAGCCCAATGGCCAGCCTGGCAGCCTCTCAACGTGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 90 bp CAGGGAATCAGGTCTTGCACCACCTTCTGGACCCAGCCACATTCCTaGGTGCACAGATCTTCTGCAGATAAGCCTACGTTCCAGTCGGGA +
Preference number: 6 (lower is better)
Translates to: QGIRSCTTFWTQPHS*VHRSSADKPTFQSG
Trigger: TCCCGACTGGAACGTAGGCTTATCTGCAGAAGATCTGTGCACCAAGGAATGTGGCTGGGTCCAGAAGGTGGTGCAAGACCTGATTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp ATGACTTGTTACATTCCGACCACTGGGACCACTCGGTaGGCTCACAGTCAATGGGGCATTCAGGGAGCATGC +
Preference number: 6 (lower is better)
Translates to: MTCYIPTTGTTR*AHSQWGIQGAC
Trigger: GCATGCTCCCTGAATGCCCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp GATCATCCGGGTTCGAATCACGTGGCCTTTCCCACATaGCTTGTTACATTCCGACCACTGGGACCACTCGGT +
Preference number: 6 (lower is better)
Translates to: DHPGSNHVAFPT*LVTFRPLGPLG
Trigger: ACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCACGTGATTCGAACCCGGATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS GCA 72 bp ACAGCAAGCATGGGATGGTGTGGCACTCTGGCATCATaGACTTCTCTGCCTGTGATGTCTCGGCTTTGCACA +
Preference number: 6 (lower is better)
Translates to: TASMGWCGTLAS*TSLPVMSRLCT
Trigger: TGTGCAAAGCCGAGACATCACAGGCAGAGAAGTGCATGATGCCAGAGTGCCACACCATCCCATGCTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS GCA 72 bp TCAATGGGGCATTCAGGGAGCATGCACTTCTCCACCTaGTCCAGATCCTCATTGCAGTCTCCAAGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SMGHSGSMHFST*SRSSLQSPSSA
Trigger: GGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGCATGCTCCCTGAATGCCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp TGCTATCCAAAACACCTGGATCCGGGTCCTCCTCCGTaGAGTGCTTTCAGTGACTGCAACAGGGCAATTGCT +
Preference number: 6 (lower is better)
Translates to: CYPKHLDPGPPP*SAFSDCNRAIA
Trigger: AGCAATTGCCCTGTTGCAGTCACTGAAAGCACTCCACGGAGGAGGACCCGGATCCAGGTGTTTTGGATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp GACAACTCTGGCTACTTGAGTGATGGACCCACCCTCTaGGTCATAGAAAGGACTCTGAGGATGGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: DNSGYLSDGPTL*VIERTLRMVQA
Trigger: AGCCTGGACCATCCTCAGAGTCCTTTCTATGACCCAGAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp TGGCCTTTCCCACATGACTTGTTACATTCCGACCACTaGGACCACTCGGTGAGCTCACAGTCAATGGGGCAT +
Preference number: 6 (lower is better)
Translates to: WPFPHDLLHSDH*DHSVSSQSMGH
Trigger: ATGCCCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCATGTGGGAAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp CCACTGGGACCACTCGGTGAGCTCACAGTCAATGGCTaGCAAGACACAGATGGGCATGAGTGTATCACATGT +
Preference number: 6 (lower is better)
Translates to: PLGPLGELTVNG*QDTDGHECITC
Trigger: ACATGTGATACACTCATGCCCATCTGTGTCTTGCCAGCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS CAA 72 bp GGGAGCATGCACTTCTCCACCTGCTCCAGATCCTCATaGCAGTCTCCAAGTTCTGCCAGAGACTTGAGCATC +
Preference number: 6 (lower is better)
Translates to: GSMHFSTCSRSS*QSPSSARDLSI
Trigger: GATGCTCAAGTCTCTGGCAGAACTTGGAGACTGCAATGAGGATCTGGAGCAGGTGGAGAAGTGCATGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp ATGACTTGTTACATTCCGACCACTGGGACCACTCGGTaGGCTCACAGTCAATGGCTGGCAAGACACAGATGG +
Preference number: 6 (lower is better)
Translates to: MTCYIPTTGTTR*AHSQWLARHRW
Trigger: CCATCTGTGTCTTGCCAGCCATTGACTGTGAGCTCACCGAGTGGTCCCAGTGGTCGGAATGTAACAAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS GCA 72 bp AGCTGCAGGCGGACCATGGGGACCAGTTGGAGTAGATaGAGGTTTCAGGGGTGTCATCTTCATCTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SCRRTMGTSWSR*RFQGCHLHLSL
Trigger: AAGAGAAAGATGAAGATGACACCCCTGAAACCTGCATCTACTCCAACTGGTCCCCATGGTCCGCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp CTTCCGTGCGATTCTCTCGATGACAACTCTGGCTACTaGAGTGATGGACCCACCCTCTGGGTCATAGAAAGG +
Preference number: 6 (lower is better)
Translates to: LPCDSLDDNSGY*SDGPTLWVIER
Trigger: CCTTTCTATGACCCAGAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGTCATCGAGAGAATCGCACGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 90 bp TTGTTCACCCTTCCGTGCGATTCTCTCGATGACAACTCTGGCTACTaGAGTGATGGACCCACCCTCTGGGTCATAGAAAGGACTCTGAGG +
Preference number: 6 (lower is better)
Translates to: LFTLPCDSLDDNSGY*SDGPTLWVIERTLR
Trigger: CCTCAGAGTCCTTTCTATGACCCAGAGGGTGGGTCCATCACTCAAGTAGCCAGAGTTGTCATCGAGAGAATCGCACGGAAGGGTGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CCA 72 bp CAGCCATTGGTGACTCTGGAATCTAGAGTGCAGCCCTaGGGAACTCGTACCCTTGCTAACAAGGATGAACAT +
Preference number: 6 (lower is better)
Translates to: QPLVTLESRVQP*GTRTLANKDEH
Trigger: ATGTTCATCCTTGTTAGCAAGGGTACGAGTTCCCCAGGGCTGCACTCTAGATTCCAGAGTCACCAATGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS TCA 72 bp CCATTTTCACGGGTGAGCCCAATTCTGCAACTTGTTTaGCGCCTTCGCTGGCATATCCTCCATATTCCCACA +
Preference number: 6 (lower is better)
Translates to: PFSRVSPILQLV*RLRWHILHIPT
Trigger: TGTGGGAATATGGAGGATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAATTGGGCTCACCCGTGAAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp TCCATTTTCACGGGTGAGCCCAATTCTGCAACTTGTTaGACGCCTTCGCTGGCATATCCTCCATATTCCCAC +
Preference number: 6 (lower is better)
Translates to: SIFTGEPNSATC*TPSLAYPPYSH
Trigger: GTGGGAATATGGAGGATATGCCAGCGAAGGCGTCAAACAAGTTGCAGAATTGGGCTCACCCGTGAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp TGGAATCTAGAGTGCAGCCCTGGGGAACTCGTACCCTaGCTAACAAGGATGAACATTGCATGCTCTGATCTC +
Preference number: 6 (lower is better)
Translates to: WNLECSPGELVP*LTRMNIACSDL
Trigger: GAGATCAGAGCATGCAATGTTCATCCTTGTTAGCAAGGGTACGAGTTCCCCAGGGCTGCACTCTAGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576479.4
ENST00000591785.1
CDS CAA 72 bp TTGGCAGTTCCGCAGGCACAGCAGTCTAAGATGGGTTaGTCAGTCACCCCATCAAATGTGGAATCTTGTTCA +
Preference number: 6 (lower is better)
Translates to: LAVPQAQQSKMG*SVTPSNVESCS
Trigger: TGAACAAGATTCCACATTTGATGGGGTGACTGACAAACCCATCTTAGACTGCTGTGCCTGCGGAACTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 90 bp AGTCTGTACTTGGCAGTTCCGCAGGCACAGCAGTCTAAGATGGGTTaGTCAGTCACCCCATCAAATGTGGAATCTTGTTCACAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: SLYLAVPQAQQSKMG*SVTPSNVESCSQSF
Trigger: GAAACTTTGTGAACAAGATTCCACATTTGATGGGGTGACTGACAAACCCATCTTAGACTGCTGTGCCTGCGGAACTGCCAAGTACAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp ACTCTGTTGTCGAATTTCTTCCTCCATTTTCACGGGTaGGCCCAATTCTGCAACTTGTTTGACGCCTTCGCT +
Preference number: 6 (lower is better)
Translates to: TLLSNFFLHFHG*AQFCNLFDAFA
Trigger: AGCGAAGGCGTCAAACAAGTTGCAGAATTGGGCTCACCCGTGAAAATGGAGGAAGAAATTCGACAACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp GCTCACAGTCAATGGCTGGCAAGACACAGATGGGCATaGGTGTATCACATGTCTGAAACAAGATATGGTCAC +
Preference number: 6 (lower is better)
Translates to: AHSQWLARHRWA*VYHMSETRYGH
Trigger: GTGACCATATCTTGTTTCAGACATGTGATACACTCATGCCCATCTGTGTCTTGCCAGCCATTGACTGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS CAA 90 bp TCATCTTTCTCTTCTGGAGCCAGGTCAGCTACAATATCATCGACATaGTCAGGTACAATATTGCATTGTTCACCCTTCCGTGCGATTCTC +
Preference number: 6 (lower is better)
Translates to: SSFSSGARSATISST*SGTILHCSPFRAIL
Trigger: GAGAATCGCACGGAAGGGTGAACAATGCAATATTGTACCTGACAATGTCGATGATATTGTAGCTGACCTGGCTCCAGAAGAGAAAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS TCA 72 bp CACATGTCTGAAACAAGATATGGTCACGCTCTCCTTTaGACATCTCAACAAGCCTATGAGGGATGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: HMSETRYGHALL*TSQQAYEGCKA
Trigger: TGCTTTGCATCCCTCATAGGCTTGTTGAGATGTTCAAAGGAGAGCGTGACCATATCTTGTTTCAGACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591785.1
CDS CAA 72 bp CAGAGAGCCCTCATCTTGAAAATAAATAATGCGTTTTaGTACGATGCTGGCCTTCAGAATCACGCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: QRALILKINNAF*YDAGLQNHAAC
Trigger: ACAGGCTGCGTGATTCTGAAGGCCAGCATCGTACAAAAACGCATTATTTATTTTCAAGATGAGGGCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp TCTTCTGGAGCCAGGTCAGCTACAATATCATCGACATaGTCAGGTACAATATTGCATTGTTCACCCTTCCGT +
Preference number: 6 (lower is better)
Translates to: SSGARSATISST*SGTILHCSPFR
Trigger: ACGGAAGGGTGAACAATGCAATATTGTACCTGACAATGTCGATGATATTGTAGCTGACCTGGCTCCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4
CDS CAA 72 bp TCAGCTACAATATCATCGACATTGTCAGGTACAATATaGCATTGTTCACCCTTCCGTGCGATTCTCTCGATG +
Preference number: 6 (lower is better)
Translates to: SATISSTLSGTI*HCSPFRAILSM
Trigger: CATCGAGAGAATCGCACGGAAGGGTGAACAATGCAATATTGTACCTGACAATGTCGATGATATTGTAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576479.4