RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPOCK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000196104

Ensembl transcript IDs: ENST00000357154.7, ENST00000357545.9, ENST00000421836.6, ENST00000502330.5, ENST00000502741.5, ENST00000502821.5, ENST00000504953.5, ENST00000505187.5, ENST00000506697.5, ENST00000506886.5, ENST00000507086.5, ENST00000507370.5, ENST00000509854.5, ENST00000510403.5, ENST00000510741.5, ENST00000511226.5, ENST00000511269.5, ENST00000511531.5, ENST00000511905.5, ENST00000512042.1, ENST00000512648.5, ENST00000512681.5, ENST00000515143.5, ENST00000515316.5, ENST00000535728.5, ENST00000541354.5

Found 784 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTaGAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTC +
Preference number: 1 (lower is better)
Translates to: HLNHKQGWDRPLGTA*RWIIWDPSTAYGLL
Trigger: GAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
3UTR GCA 90 bp ACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCTTCTTTCATCCTGTGTGTAAGCCTC +
Preference number: 1 (lower is better)
Translates to: TTGHCLQVDNMGPLH*LWSTPASFILCVSL
Trigger: GAGGCTTACACACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR TCA 90 bp AGGGGGATATACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTCTGGCAAGGTGGGTCTTGCTGTCTC +
Preference number: 1 (lower is better)
Translates to: RGIYCPRSFFTPCRF*ILLSSVWQGGSCCL
Trigger: GAGACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTATATCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR CCA 90 bp TGCACTGAAAAGAGTAGGTATGACCATCTGAACCACAAACAGGGCTaGGATAGACCACTGGGCACTGCTTGCAGGTGGATAATATGGGAC +
Preference number: 1 (lower is better)
Translates to: CTEKSRYDHLNHKQG*DRPLGTACRWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTACTCTTTTCAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
3UTR GCA 90 bp ACTTCCACTTTCATGAAGGGCCTTGAACCAGTCCCGCAATCTGTTTaGCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATT +
Preference number: 1 (lower is better)
Translates to: TSTFMKGLEPVPQSV*HFPELQVTACSLNI
Trigger: AATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGCAAACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAAGTGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
3UTR GCA 90 bp TGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACA +
Preference number: 1 (lower is better)
Translates to: CFFHPVCKPPVTNAD*SLRILSNAYFMATT
Trigger: TGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
3UTR TCA 90 bp TACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTAAGACACATGCCTGATATTCTAGTT +
Preference number: 1 (lower is better)
Translates to: YWWAYLKDMGNVLHI*LRSVFLRHMPDILV
Trigger: AACTAGAATATCAGGCATGTGTCTTAGGAAAACAGATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
3UTR TCA 90 bp AGAATGCCTTGGTACACTGTTCATTCTTATCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATAGCAGGTCATAGTTTGTATCAAGTC +
Preference number: 1 (lower is better)
Translates to: RMPWYTVHSYQGKCF*ALTGPIAGHSLYQV
Trigger: GACTTGATACAAACTATGACCTGCTATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTGATAAGAATGAACAGTGTACCAAGGCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR TCA 90 bp TCATTCATAATATCGTCTTCATCATCCTCATCATCAGTCCATTCATaGAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATA +
Preference number: 1 (lower is better)
Translates to: SFIISSSSSSSSVHS*KSPLAKSPEISKSI
Trigger: TATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAAGACGATATTATGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp GGGGGATATACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 2 (lower is better)
Translates to: GGYTVLGASLPLAASEYCPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...GCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTATATCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: RCWYRICFSQASAMFLSSAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR TCA 90 bp GCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ARCWYRICFSQASAMFLSVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...AGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp TCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGAATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 2 (lower is better)
Translates to: SLHALLTFLLVLVGLSEGMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...TCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp AAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 2 (lower is better)
Translates to: KMLVSNLLLSGLSNVFVFMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...GAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp GCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAAAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 2 (lower is better)
Translates to: ALLTFLLVLVGLSEGHGQNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp GCTTGTAGTAACCATCTTCATCACACAGGGGGATATACTGTCCTAGGAGCTTCTAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 2 (lower is better)
Translates to: ACSNHLHHTGGYTVLGASNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...AGAAGCTCCTAGGACAGTATATCCCCCTGTGTGATGAAGATGGTTACTACAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR TCA 90 bp CTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 2 (lower is better)
Translates to: LHALLTFLLVLVGLSEGHCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR TCA 90 bp TCCTGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTGGATGTGATCTTGTGTaGTCATCACTACTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: SCFFHPVCKPPVTNADCSGCDLV*SSLLSC
Trigger: ACAGGACAGTAGTGATGATCACACAAGATCACATCC...ACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502821.5
3UTR-3UTR GCA 90 bp TCCTTGCAAATTGGCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCCCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SLQIGKMLVSNLLLSGLSPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...GCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGCCAATTTGCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR GCA 90 bp CATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGCCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HPVCKPPVTNADCSLRILPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...CAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
3UTR-3UTR GCA 90 bp AGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATTCCTGGACTCCAAGTaGGGAAATAATCATCCTGAC +
Preference number: 2 (lower is better)
Translates to: RWIIWDPSTAYGLLLLLSFLDSK*GNNHPD
Trigger: GTCAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...TGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502821.5
3UTR-3UTR CCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: RCWYRICFSQASAMFLSSPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR CCA 90 bp TCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: SLHALLTFLLVLVGLSEGPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...TCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR CCA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 2 (lower is better)
Translates to: QDAGIESASLRPQQCFCLNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp ATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 2 (lower is better)
Translates to: IIWDPSTAYGLLLLLSSCVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...ACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
3UTR-3UTR CCA 90 bp GCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTATTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 2 (lower is better)
Translates to: ATSLNSRSLHALLTFLLVFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...TACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
3UTR-3UTR CCA 90 bp TCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACATTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SPLAKSPEISKSIAQSATLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...TGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR CAA 90 bp GAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTTTaGACTTCCACTTTCATGAAGGGCCTTGAACCAGTCCCGCAATCT +
Preference number: 2 (lower is better)
Translates to: ESASLRPQQCFCLLV*TSTFMKGLEPVPQS
Trigger: AGATTGCGGGACTGGTTCAAGGCCCTTCATGAAAGTGGAAGTCAAAACAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
3UTR-3UTR TCA 90 bp ATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 2 (lower is better)
Translates to: IATSKISGDLKIYSTICNASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...GTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp ATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 2 (lower is better)
Translates to: ICNTIYSGSHDFISISVNMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...GTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp ATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAACCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 2 (lower is better)
Translates to: IISPFMKIATSKISGDLKPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...TTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: RCWYRICFSQASAMFLSSSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
3UTR-3UTR CCA 90 bp TTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCTTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: FIILIISPFMKIATSKISLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...GGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR TCA 90 bp TTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCTTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 2 (lower is better)
Translates to: FIILIISPFMKIATSKISFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...GGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 2 (lower is better)
Translates to: RCWYRICFSQASAMFLSSVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR GCA 90 bp GAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 2 (lower is better)
Translates to: EISKSIAQSATPFILDPMPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...CATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 2 (lower is better)
Translates to: QDAGIESASLRPQQCFCLLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
3UTR-3UTR CCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 2 (lower is better)
Translates to: IYSTICNTIYSGSHDFISNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 2 (lower is better)
Translates to: QDAGIESASLRPQQCFCLHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
3UTR-3UTR GCA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: QDAGIESASLRPQQCFCLCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
3UTR-3UTR GCA 90 bp GTCTTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: VFIILIISPFMKIATSKISQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...GATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp ATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 2 (lower is better)
Translates to: ICNTIYSGSHDFISISVNCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...GTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp ATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 2 (lower is better)
Translates to: IATSKISGDLKIYSTICNHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...GTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR TCA 90 bp GCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 2 (lower is better)
Translates to: AQSATPFILDPMTSFPYLQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...CAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp GTTTGCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTCCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 2 (lower is better)
Translates to: VCHFPELQVTACSLNISAPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: IYSTICNTIYSGSHDFISSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp CTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 2 (lower is better)
Translates to: LAKSPEISKSIAQSATPFSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...AAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR TCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 2 (lower is better)
Translates to: IYSTICNTIYSGSHDFISQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp ACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 2 (lower is better)
Translates to: TNADCSLRILSNAYFMATENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...AGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
3UTR-3UTR GCA 90 bp GAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 2 (lower is better)
Translates to: EISKSIAQSATPFILDPMLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...CATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp CAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCACTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 2 (lower is better)
Translates to: QSATPFILDPMTSFPYLSLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...TGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR GCA 90 bp ATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAATGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 2 (lower is better)
Translates to: IISPFMKIATSKISGDLKCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...TTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp CTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 2 (lower is better)
Translates to: LAKSPEISKSIAQSATPFFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...AAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp AACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACACACCACATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 2 (lower is better)
Translates to: NTIYSGSHDFISISVNTPHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...TGGTGTGTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR TCA 90 bp ATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 2 (lower is better)
Translates to: IISPFMKIATSKISGDLKMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...TTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CCA 90 bp ATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 2 (lower is better)
Translates to: MLVSNLLLSGLSNVFVFLAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...CAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR CCA 90 bp ATTAAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATA +
Preference number: 2 (lower is better)
Translates to: IKLSLYVSQELKNALVHCIEGFS*TPSAEI
Trigger: TATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGAT...ACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAGTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502821.5
3UTR GCA 72 bp CACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTaGAGGTGGATAATATGGGACCCCTCCACTGCCTAT +
Preference number: 3 (lower is better)
Translates to: HKQGWDRPLGTA*RWIIWDPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
3UTR CCA 72 bp GATAGACCACTGGGCACTGCTTGCAGGTGGATAATATaGGACCCCTCCACTGCCTATGGTCTACTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: DRPLGTACRWII*DPSTAYGLLLL
Trigger: AAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGTCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
3UTR TCA 72 bp GGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTGGGTCTTGCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: GASLPLAASEYC*AQSGKVGLAVS
Trigger: AGAGACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp TCCTTGCAAATTGGCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 3 (lower is better)
Translates to: SLQIGKMLVSNLLLSGLSTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...GCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGCCAATTTGCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR TCA 72 bp TACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTCTGGCAAGGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: YCPRSFFTPCRF*ILLSSVWQGGS
Trigger: AGACCCACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR GCA 72 bp CACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCTTCTTTCATCCTGTGT +
Preference number: 3 (lower is better)
Translates to: HCLQVDNMGPLH*LWSTPASFILC
Trigger: ACACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR CCA 72 bp AAGAGTAGGTATGACCATCTGAACCACAAACAGGGCTaGGATAGACCACTGGGCACTGCTTGCAGGTGGATA +
Preference number: 3 (lower is better)
Translates to: KSRYDHLNHKQG*DRPLGTACRWI
Trigger: TATCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTACTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp GCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTAACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 3 (lower is better)
Translates to: ATSLNSRSLHALLTFLLVTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...TACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp GGGGGATATACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 3 (lower is better)
Translates to: GGYTVLGASLPLAASEYCQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...GCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTATATCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR CCA 72 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTCATCCTGTGTGTAAGC +
Preference number: 3 (lower is better)
Translates to: LQVDNMGPLHCL*STPASFILCVS
Trigger: GCTTACACACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR CAA 90 bp GGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTGTGTAAGCCATGTGGATGTGATCTaGTGTGATCATCACTACTGT +
Preference number: 3 (lower is better)
Translates to: GPLHCLWSTPASFILCVSHVDVI*CDHHYC
Trigger: ACAGTAGTGATGATCACACAAGATCACATCCACATG...GCTTACACACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502821.5
3UTR-3UTR CAA 90 bp GGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTGTGTAAGCTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 3 (lower is better)
Translates to: GPLHCLWSTPASFILCVSCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...GCTTACACACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
3UTR-3UTR CAA 90 bp TCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: SGDLKIYSTICNTIYSGSLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...GGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp ATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 3 (lower is better)
Translates to: IATSKISGDLKIYSTICNQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...GTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR GCA 72 bp CATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGCAATGCATACTTTATG +
Preference number: 3 (lower is better)
Translates to: HPVCKPPVTNAD*SLRILSNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
3UTR-3UTR CAA 90 bp CTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 3 (lower is better)
Translates to: LAKSPEISKSIAQSATPFTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...AAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR TCA 72 bp GCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTAAGACACATGCCTGAT +
Preference number: 3 (lower is better)
Translates to: AYLKDMGNVLHI*LRSVFLRHMPD
Trigger: ATCAGGCATGTGTCTTAGGAAAACAGATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
3UTR TCA 72 bp TGGTACACTGTTCATTCTTATCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATAGCAGGTCATAGTTTG +
Preference number: 3 (lower is better)
Translates to: WYTVHSYQGKCF*ALTGPIAGHSL
Trigger: CAAACTATGACCTGCTATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTGATAAGAATGAACAGTGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 3 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
3UTR-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 3 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
3UTR-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 3 (lower is better)
Translates to: FLAMWYLSVILTQLGLARALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
3UTR-3UTR CAA 90 bp ATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAAGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 3 (lower is better)
Translates to: IISPFMKIATSKISGDLKALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...TTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp GCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 3 (lower is better)
Translates to: AQSATPFILDPMTSFPYLALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...CAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp CAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCATGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 3 (lower is better)
Translates to: QSATPFILDPMTSFPYLSCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...TGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
3UTR-3UTR CAA 90 bp ATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAAGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 3 (lower is better)
Translates to: IISPFMKIATSKISGDLKELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...TTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR-3UTR CAA 90 bp GAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 3 (lower is better)
Translates to: EISKSIAQSATPFILDPMELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...CATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
3UTR CCA 72 bp TTGATTTCAACTGTCATCAATCAAATGTATACATCATaGTCATCACCACCATCATCATCATCCCCTTCATCT +
Preference number: 3 (lower is better)
Translates to: LISTVINQMYTS*SSPPSSSSPSS
Trigger: AGATGAAGGGGATGATGATGATGGTGGTGATGACCATGATGTATACATTTGATTGATGACAGTTGAAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp ACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: TTGHCLQVDNMGPLHCLWHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...CCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp ACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: TGHCLQVDNMGPLHCLWSHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...AGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GGGGGATATACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGYTVLGASLPLAASEYCAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...GCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTATATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp AGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: RYDHLNHKQGWDRPLGTALRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...AGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp GCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: ACRWIIWDPSTAYGLLLLLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...AAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: HFCLYWWAYLKDMGNVLHHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...GTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp GTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: VCKPPVTNADCSLRILSNHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...ATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR GCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGGCTTTCTGGAGCTGCTaGACGCGCCGCCGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEAFWSC*TRRRLE
Trigger: CTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGC...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGGCTGCTTTCTGGAGCTaGTGCACGCGCCGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEAAFWS*CTRRRL
Trigger: GAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGC...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp ACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TTGHCLQVDNMGPLHCLWPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...CCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HCLQVDNMGPLHCLWSTPMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...AGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATGCTGCTTTCTGGAGCTaGTGCACGCGCCGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHAAFWS*CTRRRL
Trigger: GAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGC...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ACRWIIWDPSTAYGLLLLTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...AAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCACACACAGTACGGCTaGCACCTTGAGCATACACAC +
Preference number: 4 (lower is better)
Translates to: ACRWIIWDPSTAYGLLLLHTQYG*HLEHTH
Trigger: GTGTGTATGCTCAAGGTGTCAGCCGTACTGTGTGTG...AAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp ACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAACACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: TLLTFLLVLVGLSEGHGQHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp AAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: KMLVSNLLLSGLSNVFVFHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...GAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQVDNMGPLHCLWSTPASMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...AGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CCA 90 bp GCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ACRWIIWDPSTAYGLLLLPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...AAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CCA 90 bp CACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTTTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HCLQVDNMGPLHCLWSTPLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...AGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR CCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGGCTCGCAGCTCCTGCTaGAAATGCAGCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEARSSC*KCSPAL
Trigger: CAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGC...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp CATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACGCTCGCAGCTCCTGCTaGAAATGCAGCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HFCLYWWAYLKDMGNVLHARSSC*KCSPAL
Trigger: CAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGC...GTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp ACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAAGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLLTFLLVLVGLSEGHGQAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp CTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LHALLTFLLVLVGLSEGHAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CWYRICFSQASAMFLSSCAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...ACAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RSLHALLTFLLVLVGLSEAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp ACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TTGHCLQVDNMGPLHCLWTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...CCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTGTGTAAGCTTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: GPLHCLWSTPASFILCVSFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...GCTTACACACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR TCA 90 bp AGTAGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SRYDHLNHKQGWDRPLGTTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGCACCAAGCGGCTaGACACACACACAGTACGGC +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLTAPSG*THTQYG
Trigger: GCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HPVCKPPVTNADCSLRILMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...CAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCTTTCTGGAGCTGCTaGACGCGCCGCCGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARAFWSC*TRRRLE
Trigger: CTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGCTGCTTTCTGGAGCTaGTGCACGCGCCGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKAAFWS*CTRRRL
Trigger: GAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCTGTGCTCGCAGCTCCTaGTGGAAATGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEICARSS*WKCSPA
Trigger: AGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACA...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LQVDNMGPLHCLWSTPASPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...AGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AGTAGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTTTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRYDHLNHKQGWDRPLGTLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCTTGCAAATTGGCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLQIGKMLVSNLLLSGLSVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...GCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGCCAATTTGCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GGGGGATATACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGYTVLGASLPLAASEYCVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...GCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTATATCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LQVDNMGPLHCLWSTPASASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...AGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: FIILIISPFMKIATSKISHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...GGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp GTTTGCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VCHFPELQVTACSLNISAMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCAATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CKPPVTNADCSLRILSNAMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...TGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR GCA 90 bp AGGGCCTTGAACCAGTCCCGCAATCTGTTTGCCACTTCCCTGAACTCCAGGTCACTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RALNQSRNLFATSLNSRSLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...TGACCTGGAGTTCAGGGAAGTGGCAAACAGATTGCGGGACTGGTTCAAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp TATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTGCAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: YDHLNHKQGWDRPLGTACSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...GCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCAATGCAGCCCTGCTCTaGCAACTCGCTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEINAALL*QLAAFW
Trigger: CCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATT...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTTGTGCTCGCAGCTCCTaGTGGAAATGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTCARSS*WKCSPA
Trigger: AGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACA...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp TATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTGCCCTATGGTCTACTCCTaGTTCTTTCATCGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: YDHLNHKQGWDRPLGTACPMVYS*FFHRLG
Trigger: TCCGAGACGATGAAAGAAGCAGGAGTAGACCATAGG...GCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507370.5
CDS-3UTR CCA 90 bp ACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: TGHCLQVDNMGPLHCLWSFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...AGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CCA 90 bp GATAGACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: DRPLGTACRWIIWDPSTAAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...GGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCAACTCGCTGCTTTCTaGAGCTGCTGCACGCGCCGC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSQLAAF*SCCTRR
Trigger: GCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCAACTCGCTGCTTTCTaGAGCTGCTGCACGCGCCGC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKQLAAF*SCCTRR
Trigger: GCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR CCA 90 bp AGCACTCAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAACAACTCGCTGCTTTCTaGAGCTGCTGCACGCGCCGC +
Preference number: 4 (lower is better)
Translates to: STQSTLLTFLLVLVGLSEQLAAF*SCCTRR
Trigger: GCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTG...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTGAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp AAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTGAGCATCTTGTTGTaGGCCAGCACTGTGCTCGCA +
Preference number: 4 (lower is better)
Translates to: KPPVTNADCSLRILSNAYLSILL*ASTVLA
Trigger: TGCGAGCACAGTGCTGGCTCACAACAAGATGCTCAA...GTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR TCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
CDS-3UTR TCA 90 bp GCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTAGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ATSLNSRSLHALLTFLLVVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...TACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
CDS-3UTR TCA 90 bp GTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VCKPPVTNADCSLRILSNVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...ATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR TCA 90 bp CACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HCLQVDNMGPLHCLWSTPTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...AGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTECVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR TCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEICVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR TCA 90 bp GTTTGCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VCHFPELQVTACSLNISACVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515143.5
CDS-3UTR TCA 90 bp GAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ELQVTACSLNISACTGGLVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...AAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEITGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp GAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ELQVTACSLNISACTGGLTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...AAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp ACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: TTGHCLQVDNMGPLHCLWMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...CCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR TCA 90 bp CATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HPVCKPPVTNADCSLRILASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...CAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR TCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGGGCCTTGAACCAGTCCCGCAATCTGTTTGCCACTTCCCTGAACTCCAGGTCACCTAAGACACATGCCTaGTATTCTAGTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: RALNQSRNLFATSLNSRSPKTHA*YSSLHC
Trigger: ACAGTGCAAACTAGAATATCAGGCATGTGTCTTAGG...TGACCTGGAGTTCAGGGAAGTGGCAAACAGATTGCGGGACTGGTTCAAGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515143.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCACCGCCGCGGCAGCTaGGAGAGACTGACTGCACCA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSHRRGS*ERLTAP
Trigger: TGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEIPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTGCCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YDHLNHKQGWDRPLGTACLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...GCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCTTTCTGGAGCTGCTaGACGCGCCGCCGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFAFWSC*TRRRLE
Trigger: CTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCTGCTTTCTGGAGCTaGTGCACGCGCCGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFAAFWS*CTRRRL
Trigger: GAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTCTGGAAATGCAGCCCTaGTCTGCCAACTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTLEMQP*SANSLL
Trigger: AAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAG...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QDAGIESASLRPQQCFCLAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSLHALLTFLLVLVGLSEAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
CDS-3UTR TCA 90 bp GTTTGCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: VCHFPELQVTACSLNISAHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
CDS-3UTR TCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEIHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAKSPEISKSIAQSATPFAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...AAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: RYDHLNHKQGWDRPLGTATERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...AGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGTAGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SRYDHLNHKQGWDRPLGTTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR TCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp ACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCAACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: TFLLVLVGLSEGHGQCPSTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...TGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGTTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: LQVDNMGPLHCLWSTPASQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...AGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VCKPPVTNADCSLRILSNASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...ATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR TCA 90 bp GAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ELQVTACSLNISACTGGLASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...AAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GCTTGTAGTAACCATCTTCATCACACAGGGGGATATACTGTCCTAGGAGCTTCTACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ACSNHLHHTGGYTVLGASTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...AGAAGCTCCTAGGACAGTATATCCCCCTGTGTGATGAAGATGGTTACTACAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGTACGGCTGACACCTTaGGCATCTTCCTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSVRLTP*ASSSRW
Trigger: CCAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTAC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGTACGGCTGACACCTTaGGCATCTTCCTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARVRLTP*ASSSRW
Trigger: CCAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTAC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACTGCACCAAGCGGCTaGACACACACACAGTACGGC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKTAPSG*THTQYG
Trigger: GCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCACTGCACCAAGCGGCTaGACACACACACAGTACGGC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSTAPSG*THTQYG
Trigger: GCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGCACTCAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAACTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: STQSTLLTFLLVLVGLSELRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTGAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR GCA 90 bp GCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: ADCSLRILSNAYFMATTFLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...AAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR GCA 90 bp ACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: TGHCLQVDNMGPLHCLWSENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...AGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR GCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RCWYRICFSQASAMFLSSMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp GGGGGATATACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGYTVLGASLPLAASEYCSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...GCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTATATCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGCTGCTTTCTGGAGCTaGTGCACGCGCCGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRAAFWS*CTRRRL
Trigger: GAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCTCTGCCAACTCGCTaGTTTCTGGAGCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARALPTR*FLELLH
Trigger: GTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGCTCTGCCAACTCGCTaGTTTCTGGAGCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKALPTR*FLELLH
Trigger: GTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp AGCACTCAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGCTCTGCCAACTCGCTaGTTTCTGGAGCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: STQSTLLTFLLVLVGLSEALPTR*FLELLH
Trigger: GTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGC...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTGAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp CAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGCTCTGCCAACTCGCTaGTTTCTGGAGCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QSTLLTFLLVLVGLSEGHALPTR*FLELLH
Trigger: GTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGC...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTGTGCTCGCAGCTCCTaGTGGAAATGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKCARSS*WKCSPA
Trigger: AGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ILIISPFMKIATSKISGDAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...ATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CCA 90 bp ACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TGHCLQVDNMGPLHCLWSKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...AGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR CCA 90 bp GCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAACTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ALLTFLLVLVGLSEGHGQLSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCCCATCCTCAAGCAGTaGCCTCCATGGCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSPILKQ*PPWRGE
Trigger: TTCTCCACGCCATGGAGGCCACTGCTTGAGGATGGG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535728.5
CDS-3UTR TCA 90 bp CTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTTTGAGCATCTTGTTGTaGGCCAGCACTGTGCTCGCA +
Preference number: 4 (lower is better)
Translates to: LLTFLLVLVGLSEGHGQCLSILL*ASTVLA
Trigger: TGCGAGCACAGTGCTGGCTCACAACAAGATGCTCAA...ACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
CDS-3UTR TCA 90 bp ACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: TFLLVLVGLSEGHGQCPSHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...TGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTCATCTTTAGCAGCTGCGAGAGACTaGCTGCACCAAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QSENLEQCILYGDYISSLAAARD*LHQAAA
Trigger: TGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGC...TAAAGATGAAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR TCA 90 bp ACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: TGHCLQVDNMGPLHCLWSNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...AGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: RCWYRICFSQASAMFLSSTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp GGGGGATATACTGTCCTAGGAGCTTCTTTACCCCTTGCCGCTTCTGAATATTGCCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: GGYTVLGASLPLAASEYCQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...GCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTCCTAGGACAGTATATCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGTGCTTCTTTCATCCCTaGTCGAAGGGTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLCFFHP*SKGFPG
Trigger: TCCAGGAAAACCCTTCGATCAGGGATGAAAGAAGCA...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTTCATTCCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: LSLYVSQELKNALVHCSFLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...GAATGAACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: HPVCKPPVTNADCSLRILFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...CAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515316.5
CDS-3UTR GCA 90 bp GGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTGTGTAAGCGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: GPLHCLWSTPASFILCVSENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...GCTTACACACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR GCA 90 bp TCCTGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SCFFHPVCKPPVTNADCSVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...ACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: KMLVSNLLLSGLSNVFVFPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...GAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp GAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: ELQVTACSLNISACTGGLSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...AAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAATGCAGCCCTGCTCTaGCAACTCGCTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSNAALL*QLAAFW
Trigger: CCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAATGCAGCCCTGCTCTaGCAACTCGCTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKNAALL*QLAAFW
Trigger: CCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp CAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATAATGCAGCCCTGCTCTaGCAACTCGCTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QSTLLTFLLVLVGLSEGHNAALL*QLAAFW
Trigger: CCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATT...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACTGGAAATGCAGCCCTaGTCTGCCAACTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARLEMQP*SANSLL
Trigger: AAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCTGGAAATGCAGCCCTaGTCTGCCAACTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKLEMQP*SANSLL
Trigger: AAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp CAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATCTGGAAATGCAGCCCTaGTCTGCCAACTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QSTLLTFLLVLVGLSEGHLEMQP*SANSLL
Trigger: AAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAG...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QDAGIESASLRPQQCFCLPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: CWYRICFSQASAMFLSSCNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...ACAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAACTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RSLHALLTFLLVLVGLSELSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp ATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGCTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MLVSNLLLSGLSNVFVFLLSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...CAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACAACTCGCTGCTTTCTaGAGCTGCTGCACGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRQLAAF*SCCTRR
Trigger: GCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCTCGCAGCTCCTGCTaGAAATGCAGCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFARSSC*KCSPAL
Trigger: CAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGCTCGCAGCTCCTGCTaGAAATGCAGCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSARSSC*KCSPAL
Trigger: CAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGATCCCAGCTACAGTTaGCTCCGGATAGGACGCTTG +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARDPSYS*LRIGRL
Trigger: CAAGCGTCCTATCCGGAGCCAACTGTAGCTGGGATC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGCATCTTCCTCTCGCTaGATCCCAGCTACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSASSSR*IPATVG
Trigger: GCCAACTGTAGCTGGGATCCAGCGAGAGGAAGATGC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTGAGCATCTTGTTGTaGGCCAGCACTGTGCTCGCA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSLSILL*ASTVLA
Trigger: TGCGAGCACAGTGCTGGCTCACAACAAGATGCTCAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
CDS-3UTR TCA 90 bp GATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: DAGIESASLRPQQCFCLLHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...AAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
CDS-3UTR TCA 90 bp CTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLTFLLVLVGLSEGHGQCHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...ACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
CDS-3UTR TCA 90 bp TCCTGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: SCFFHPVCKPPVTNADCSTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...ACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATTTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: LHALLTFLLVLVGLSEGHFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGTACGGCTGACACCTTaGGCATCTTCCTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFVRLTP*ASSSRW
Trigger: CCAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTAC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCACACACAGTACGGCTaGCACCTTGAGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKHTQYG*HLEHLP
Trigger: AGGAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACACACACAGTACGGCTaGCACCTTGAGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARHTQYG*HLEHLP
Trigger: AGGAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCACACACAGTACGGCTaGCACCTTGAGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSHTQYG*HLEHLP
Trigger: AGGAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGTACGGCTGACACCTTaGGCATCTGGGAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFVRLTP*ASGRGD
Trigger: GTCTCCTCTCCCAGATGCTCAAGGTGTCAGCCGTAC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511269.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACTGCACCAAGCGGCTaGACACACACACAGTACGGC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTAPSG*THTQYG
Trigger: GCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: IYSTICNTIYSGSHDFISLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEIFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR GCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR GCA 90 bp GTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VCKPPVTNADCSLRILSNVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...ATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR GCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGCCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGCCTGATATTCTAGTTTaGACTGTGTGTAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLPDILV*TVCKPP
Trigger: CGGAGGCTTACACACAGTGCAAACTAGAATATCAGG...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502741.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: MLVSNLLLSGLSNVFVFLCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...CAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGATGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SLHALLTFLLVLVGLSEGCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...TCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: IYSTICNTIYSGSHDFISAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: IATSKISGDLKIYSTICNNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...GTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp AAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: KPPVTNADCSLRILSNAYHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...GTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARLSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKLSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGDLKIYSTICNTIYSGSVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...GGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
CDS-3UTR TCA 90 bp GCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: ADCSLRILSNAYFMATTFHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...AAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR TCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp CATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: HFCLYWWAYLKDMGNVLHTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...GTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACATTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: SPLAKSPEISKSIAQSATFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...TGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp GTCTTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: VFIILIISPFMKIATSKITPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...GATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: LQVDNMGPLHCLWSTPASLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...AGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGTAGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: SRYDHLNHKQGWDRPLGTLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGCTTCTTTCATCCCTaGTCGAAGGGTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RCWYRICFSQASAMFLSSCFFHP*SKGFPG
Trigger: TCCAGGAAAACCCTTCGATCAGGGATGAAAGAAGCA...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511905.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAACTGCACCAAGCGGCTaGACACACACACAGTACGGC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRTAPSG*THTQYG
Trigger: GCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp GCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: ALLTFLLVLVGLSEGHGQFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTCCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: RYDHLNHKQGWDRPLGTAPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...AGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp GCTTGTAGTAACCATCTTCATCACACAGGGGGATATACTGTCCTAGGAGCTTCTCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ACSNHLHHTGGYTVLGASLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...AGAAGCTCCTAGGACAGTATATCCCCCTGTGTGATGAAGATGGTTACTACAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp AAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KMLVSNLLLSGLSNVFVFSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...GAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATGTGCTCGCAGCTCCTaGTGGAAATGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRCARSS*WKCSPA
Trigger: AGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS-3UTR GCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGTTCCTGGACTCCAAGTaGGGAAATAATCATCCTCTA +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEFLDSK*GNNHPL
Trigger: TAGAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCTTCCTGGACTCCAAGTaGGGAAATAATCATCCTCTA +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEIFLDSK*GNNHPL
Trigger: TAGAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATCCTGATATTCTAGTTTaGACTGTGTGTAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHPDILV*TVCKPP
Trigger: CGGAGGCTTACACACAGTGCAAACTAGAATATCAGG...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502741.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR CCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTIEGFS*TPSAEI
Trigger: TATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGAT...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000507086.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp GCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: ADCSLRILSNAYFMATTFCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...AAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGCTGGGATAGACCACTaGGCACTGCTTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRAGIDH*ALLAGG
Trigger: TCCACCTGCAAGCAGTGCCCAGTGGTCTATCCCAGC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp GTCTTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: VFIILIISPFMKIATSKINHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...GATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp ACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCATTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: TFLLVLVGLSEGHGQCPSFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...TGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp GCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: ALLTFLLVLVGLSEGHGQFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp GCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAACATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: ALLTFLLVLVGLSEGHGQHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp TCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SGDLKIYSTICNTIYSGSLSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...GGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp ATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAATTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: IISPFMKIATSKISGDLKLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...TTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEIAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGATCCCAGCTACAGTTaGCTCCGGATAGGACGCTTG +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSDPSYS*LRIGRL
Trigger: CAAGCGTCCTATCCGGAGCCAACTGTAGCTGGGATC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCATCTTCCTCTCGCTaGATCCCAGCTACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFASSSR*IPATVG
Trigger: GCCAACTGTAGCTGGGATCCAGCGAGAGGAAGATGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTTGAGCATCTTGTTGTaGGCCAGCACTGTGCTCGCA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLSILL*ASTVLA
Trigger: TGCGAGCACAGTGCTGGCTCACAACAAGATGCTCAA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
ENST00000512681.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
ENST00000512681.5
CDS-3UTR TCA 90 bp ATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ICNTIYSGSHDFISISVNVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...GTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
ENST00000512681.5
CDS-3UTR TCA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RCWYRICFSQASAMFLSSTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp ACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAAACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TLLTFLLVLVGLSEGHGQTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp AAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KMLVSNLLLSGLSNVFVFTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...GAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGTAGGTATGACCATCTaGACCACAAACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSVGMTI*TTNRAG
Trigger: CCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTAC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp ATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ICNTIYSGSHDFISISVNTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...GTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp GATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: DAGIESASLRPQQCFCLLQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...AAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCTGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: SCFFHPVCKPPVTNADCSLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...ACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR TCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATCCTAAGACACATGCCTaGTATTCTAGTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHPKTHA*YSSLHC
Trigger: ACAGTGCAAACTAGAATATCAGGCATGTGTCTTAGG...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502741.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR TCA 90 bp ACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACCTAAGACACATGCCTaGTATTCTAGTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: TFLLVLVGLSEGHGQCPSPKTHA*YSSLHC
Trigger: ACAGTGCAAACTAGAATATCAGGCATGTGTCTTAGG...TGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502741.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACACACACAGTACGGCTaGCACCTTGAGCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRHTQYG*HLEHLG
Trigger: TCCCAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511269.5
CDS-3UTR TCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCCACACACAGTACGGCTaGCACCTTGAGCATACACAC +
Preference number: 4 (lower is better)
Translates to: IYSTICNTIYSGSHDFISHTQYG*HLEHTH
Trigger: GTGTGTATGCTCAAGGTGTCAGCCGTACTGTGTGTG...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511905.5
CDS-3UTR GCA 90 bp AAACTTTGTTTCTTGATAGGGTTCCATAGCACTCAGAGTACTCTCTTAACATTTCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACA +
Preference number: 4 (lower is better)
Translates to: KLCFLIGFHSTQSTLLTFLRETD*TKRLHT
Trigger: TGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAG...AAATGTTAAGAGAGTACTCTGAGTGCTATGGAACCCTATCAAGAAACAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp ATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: MLVSNLLLSGLSNVFVFLVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...CAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515143.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRMGPLH*LWSTPA
Trigger: AGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCAT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: LAKSPEISKSIAQSATPFPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...AAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAACTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSLHALLTFLLVLVGLSELQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp GCTTGTAGTAACCATCTTCATCACACAGGGGGATATACTGTCCTAGGAGCTTCTTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ACSNHLHHTGGYTVLGASCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...AGAAGCTCCTAGGACAGTATATCCCCCTGTGTGATGAAGATGGTTACTACAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTCCTGATATTCTAGTTTaGACTGTGTGTAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CWYRICFSQASAMFLSSCPDILV*TVCKPP
Trigger: CGGAGGCTTACACACAGTGCAAACTAGAATATCAGG...ACAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515143.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATGCATACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: MHTLWRLHFIFKHGSLAGPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...TCCAGCTAAGGATCCATGCTTAAAGATGAAATGTAGTCGCCATAAAGTATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: LHALLTFLLVLVGLSEGHFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp CTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LLTFLLVLVGLSEGHGQCHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...ACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp AAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KPPVTNADCSLRILSNAYKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...GTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CCA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACACACCATTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NTIYSGSHDFISISVNTPLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...TGGTGTGTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGACACCTTGAGCATCTaGGAGAGGAGACACAACGGG +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRDTLSI*ERRHNG
Trigger: CCCGTTGTGTCTCCTCTCCCAGATGCTCAAGGTGTC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511269.5
3UTR CAA 72 bp CCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATGGCGACTACATTTCAT +
Preference number: 4 (lower is better)
Translates to: PPVTNADCSLRI*SNAYFMATTFH
Trigger: ATGAAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
3UTR CAA 72 bp TCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTTTaGACTTCCACTTTCATGAAGGGCCTTGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: SLRPQQCFCLLV*TSTFMKGLEPV
Trigger: GACTGGTTCAAGGCCCTTCATGAAAGTGGAAGTCAAAACAAGAAGACAAAAACATTGCTGAGGCCTGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTGAGCATCTTGTTGTaGGCCAGCACTGTGCTCGCA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRLSILL*ASTVLA
Trigger: TGCGAGCACAGTGCTGGCTCACAACAAGATGCTCAA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
ENST00000512681.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGTACGGCTGACACCTTaGGCATCTTGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRVRLTP*ASCCEP
Trigger: TGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTAC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
ENST00000512681.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
ENST00000512681.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCACACACAGTACGGCTaGCACCTTGAGCATCTTGTT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSHTQYG*HLEHLV
Trigger: AACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000510741.5
ENST00000512681.5
CDS-3UTR TCA 90 bp ACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAAACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: TLLTFLLVLVGLSEGHGQTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QSTLLTFLLVLVGLSEGHTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR TCA 90 bp CAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTCATCTTTATGTGTAAGCCTCCGGTaGCTAATGCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QSENLEQCILYGDYISSLCVSLR*LMQTAV
Trigger: GACTGCAGTCTGCATTAGTCACCGGAGGCTTACACA...TAAAGATGAAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR TCA 90 bp AGTCCTTGCAAATTGGCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SPCKLARCWYRICFSQASNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...TGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGCCAATTTGCAAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp GCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTAAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: ATSLNSRSLHALLTFLLVNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...TACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp CATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: HFCLYWWAYLKDMGNVLHNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...GTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAACTGGTGGGCTTATCTaGAGGACATGGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRTGGLI*RTWAMS
Trigger: GGACATTGCCCATGTCCTTCAGATAAGCCCACCAGT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAACCCCTTGCCGCTTCTaGATATTGCTGAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRTPCRF*ILLSSV
Trigger: GACTGAGCTCAGCAATATTCAGAAGCGGCAAGGGGT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGGATGTGATCTTGTGTaGTCATCACTACTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSGCDLV*SSLLSC
Trigger: ACAGGACAGTAGTGATGATCACACAAGATCACATCC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421836.6
CDS-3UTR TCA 90 bp ACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTGGATGTGATCTTGTGTaGTCATCACTACTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TNADCSLRILSNAYFMATGCDLV*SSLLSC
Trigger: ACAGGACAGTAGTGATGATCACACAAGATCACATCC...AGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502821.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAATAATCATCCTGACTaGGCCCAGAAGACATGTGGA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKNNHPD*AQKTCG
Trigger: TCCACATGTCTTCTGGGCTCAGTCAGGATGATTATT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421836.6
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACACACACAGTACGGCTaGCACCTTGAGCATACACAC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRHTQYG*HLEHTH
Trigger: GTGTGTATGCTCAAGGTGTCAGCCGTACTGTGTGTG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511905.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACCACTGGGCACTGCTTaGAGGTGGATAATATGGGAC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRPLGTA*RWIIWD
Trigger: GTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPLAKSPEISKSIAQSATLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...TGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp ATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MLVSNLLLSGLSNVFVFLCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...CAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTCCTGGACTCCAAGTaGGGAAATAATCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSFLDSK*GNNHPD
Trigger: GTCAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421836.6
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATTCCTGGACTCCAAGTaGGGAAATAATCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARFLDSK*GNNHPG
Trigger: ACCAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535728.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSIEGFS*TPSAEI
Trigger: TATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGAT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARIEGFS*TPSAEI
Trigger: TATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGAT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCTGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: SCFFHPVCKPPVTNADCSAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...ACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGATCTAAACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TLWRLHFIFKHGSLAGSKPLHCL*STPASF
Trigger: GAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGG...TTTAGATCCAGCTAAGGATCCATGCTTAAAGATGAAATGTAGTCGCCATAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000515316.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCTGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: IYSTICNTIYSGSHDFISCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAACCACAAACAGGGCTaGGATAGACCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRNHKQG*DRPLGT
Trigger: AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACATTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: SPLAKSPEISKSIAQSATFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...TGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AGCACTCAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAACATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: STQSTLLTFLLVLVGLSEHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTGAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACTCAGTCTGGCAAGGTaGGTCTTGCTGTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRLSLAR*VLLSLE
Trigger: TTCCAGAGACAGCAAGACCCACCTTGCCAGACTGAG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTGCTGAGCTCAGTCTaGCAAGGTGGGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRLLSSV*QGGSCC
Trigger: ACAGCAAGACCCACCTTGCCAGACTGAGCTCAGCAA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp GTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATCAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: VCKPPVTNADCSLRILSNQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...ATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp ACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: TNADCSLRILSNAYFMATTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...AGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTCATGAAGGGCCTTaGACCAGTCCCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRFHEGP*TSPAIC
Trigger: ACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp GATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: DAGIESASLRPQQCFCLLMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...AAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGCTTCTGAATATTGCTaGGCTCAGTCTGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRASEYC*AQSGKV
Trigger: CACCTTGCCAGACTGAGCTCAGCAATATTCAGAAGC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp GCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: ARCWYRICFSQASAMFLSLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...AGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTGCTTCTTTCATCCCTaGTCGAAGGGTTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSCFFHP*SKGFPG
Trigger: TCCAGGAAAACCCTTCGATCAGGGATGAAAGAAGCA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511905.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAAGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: TLLTFLLVLVGLSEGHGQENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR GCA 90 bp TCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGAGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: SLHALLTFLLVLVGLSEGENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...TCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515143.5
CDS-3UTR GCA 90 bp GATCTAAAGCTGGCAAGTACTAATCCAAAGGAAGGCAGTTATGGCAATATTCACCCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: DLKLASTNPKEGSYGNIHPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...GTGAATATTGCCATAACTGCCTTCCTTTGGATTAGTACTTGCCAGCTTTAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515316.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ILIISPFMKIATSKISGDCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...ATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: QSATPFILDPMTSFPYLSSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...TGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACACACCAAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: NTIYSGSHDFISISVNTPSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...TGGTGTGTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: IYSTICNTIYSGSHDFISSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTCCTGGACTCCAAGTaGGGAAATAATCATCCTCTA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSFLDSK*GNNHPL
Trigger: TAGAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGCAAATTGGCAAGATaGTGGTATCGAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARCKLAR*WYRILS
Trigger: AGAGAGGATTCGATACCAGCATCTTGCCAATTTGCA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510741.5
CDS-3UTR CCA 90 bp GTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: VCKPPVTNADCSLRILSNAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...ATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR CCA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTEAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR CCA 90 bp CAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTCATCTTTATGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: QSENLEQCILYGDYISSLCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...TAAAGATGAAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATGCAGGTGGATAATATaGGACCCCTCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRCRWII*DPSTAY
Trigger: ATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: FIILIISPFMKIATSKISHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...GGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CWYRICFSQASAMFLSSCKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...ACAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp GCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTCAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: ARCWYRICFSQASAMFLSQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...AGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp ATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCGGAGATCTCAAAACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: IISPFMKIATSKISGDLKTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...TTTGAGATCTCCGGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: SGDLKIYSTICNTIYSGSTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...GGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: LLTFLLVLVGLSEGHGQCNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...ACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp ATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: IATSKISGDLKIYSTICNMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...GTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp ATGCATACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGAAATAATCATCCTGACTaGGCCCAGAAGACATGTGGA +
Preference number: 4 (lower is better)
Translates to: MHTLWRLHFIFKHGSLAGNNHPD*AQKTCG
Trigger: TCCACATGTCTTCTGGGCTCAGTCAGGATGATTATT...TCCAGCTAAGGATCCATGCTTAAAGATGAAATGTAGTCGCCATAAAGTATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502821.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000511269.5
ENST00000511905.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSFLDSK*GNNHRL
Trigger: GAGACGATGATTATTTCCGCACTTGGAGTCCAGGAA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000511269.5
ENST00000511905.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp CTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LAKSPEISKSIAQSATPFVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...AAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCCCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IYSTICNTIYSGSHDFISPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp GCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAACCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: ALLTFLLVLVGLSEGHGQPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp ACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: TFLLVLVGLSEGHGQCPSPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...TGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCCTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IYSTICNTIYSGSHDFISLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...GGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAGCCAAGTGAGTCCTTaGAAATTGGCAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRSQVSP*KLARCW
Trigger: CCAGCATCTTGCCAATTTGCAAGGACTCACTTGGCT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAGCACTGTCCAACACTaGCATGACATTGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRSTVQH*HDIVLA
Trigger: AGCCAACACAATGTCATGGCAGTGTTGGACAGTGCT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAAAGTTACGGAGAAGCATaGATGTTGCAAGAGTATATT +
Preference number: 4 (lower is better)
Translates to: TLLTFLLVLVGLSEGHGQSYGEA*MLQEYI
Trigger: AATATACTCTTGCAACATGCATGCTTCTCCGTAACT...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSIEGFS*TPSAEI
Trigger: TATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGAT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CATACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGATCTATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: HTLWRLHFIFKHGSLAGSIEGFS*TPSAEI
Trigger: TATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGAT...AGATCCAGCTAAGGATCCATGCTTAAAGATGAAATGTAGTCGCCATAAAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000515316.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTTCTGCTTGTACTGGTaGGCTTATCTGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSFCLYW*AYLKDM
Trigger: CATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCACATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QSATPFILDPMTSFPYLSHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...TGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTTCACATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: KLSLYVSQELKNALVHCSHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...TGAACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGTTTTTCTTGCCATGTaGTATCTCTCTGTTATCCTG +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKVFLAM*YLSVIL
Trigger: CAGGATAACAGAGAGATACCACATGGCAAGAAAAAC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGTTTTTCTTGCCATGTaGTATCTCTCTGTTATCCTG +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARVFLAM*YLSVIL
Trigger: CAGGATAACAGAGAGATACCACATGGCAAGAAAAAC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp AACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACACACCAACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: NTIYSGSHDFISISVNTPTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...TGGTGTGTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp ACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGATCTAAAACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TLWRLHFIFKHGSLAGSKTSLSY*EIVVSH
Trigger: ATGGCTCACCACAATCTCTCAGTATGACAAGGAAGT...TTTAGATCCAGCTAAGGATCCATGCTTAAAGATGAAATGTAGTCGCCATAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000515316.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: QSTLLTFLLVLVGLSEGHNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACAAGGTAAATGCTTCTaGGCTCTGACTGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRQGKCF*ALTGPI
Trigger: TATTGGACCAGTCAGAGCTCAGAAGCATTTACCTTG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCCTAAGACACATGCCTaGTATTCTAGTTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFPKTHA*YSSLQS
Trigger: AGACTGCAAACTAGAATATCAGGCATGTGTCTTAGG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512681.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRVTNAD*SLRILS
Trigger: GCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCAC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACCTATGGTCTACTCCTaGTTCTTTCATCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRPMVYS*FFHPVC
Trigger: ACACACAGGATGAAAGAAGCAGGAGTAGACCATAGG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp CTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATCCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: LHALLTFLLVLVGLSEGHPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACTCCAGGTCACTGCATaGTCTCTTAACATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRLQVTA*SLNISA
Trigger: AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: QDAGIESASLRPQQCFCLTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTCACTTTGTTTTTCTTaGCATGTGGTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKSLCFS*HVVSLC
Trigger: ACAGAGAGATACCACATGGCAAGAAAAACAAAGTGA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATCACTTTGTTTTTCTTaGCATGTGGTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARSLCFS*HVVSLC
Trigger: ACAGAGAGATACCACATGGCAAGAAAAACAAAGTGA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTCACTTTGTTTTTCTTaGCATGTGGTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSSLCFS*HVVSLC
Trigger: ACAGAGAGATACCACATGGCAAGAAAAACAAAGTGA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTTCCTGGACTCCAAGTaGGGAAATAATCATCCTCTA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFFLDSK*GNNHPL
Trigger: TAGAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTTCCTGGACTCCAAGTaGGGAAATAATCATCCTCTA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSFLDSK*GNNHPL
Trigger: TAGAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR GCA 90 bp ATTAAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTTTCCTGGACTCCAAGTaGGGAAATAATCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: IKLSLYVSQELKNALVHCFLDSK*GNNHPD
Trigger: GTCAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...ACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAGTTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502821.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACATTTCTGCTTGTACTaGTGGGCTTATCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRHFCLY*WAYLKD
Trigger: GTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp GAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: EISKSIAQSATPFILDPMAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...CATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRTERLW*AIVYHP
Trigger: TGGATGATAAACAATGGCTCACCACAATCTCTCAGT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGAGAATCTTGAGCAATaGATACTTTATGGCGACTAC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSENLEQ*ILYGDY
Trigger: GTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATGCAAATTGGCAAGATaGTGGTATCGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRCKLAR*WYRICF
Trigger: GAAGCAGATTCGATACCAGCATCTTGCCAATTTGCA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ATCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: IATSKISGDLKIYSTICNTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...GTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTCCTGGACTCCAAGTaGGGAAATAATCATCCTCTA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRFLDSK*GNNHPL
Trigger: TAGAGGATGATTATTTCCGCACTTGGAGTCCAGGAA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCCTGATATTCTAGTTTaGAGTCTCGGAATTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSPDILV*SLGICS
Trigger: GGAACAAATTCCGAGACTGCAAACTAGAATATCAGG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512681.5
CDS-3UTR CCA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: FLAMWYLSVILTQLGLARAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CCA 90 bp CAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: QSTLLTFLLVLVGLSEGHAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp AGCACTCAGAGTACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: STQSTLLTFLLVLVGLSEAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGTACTCTGAGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ICNTIYSGSHDFISISVNKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...GTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGCCATGACATTGTGTTaGCTTGTAGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRAMTLC*LVVTIF
Trigger: GAAGATGGTTACTACAAGCCAACACAATGTCATGGC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGTTTTTCTTGCCATGTaGTATCTCTCTGTTATCCTG +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFVFLAM*YLSVIL
Trigger: CAGGATAACAGAGAGATACCACATGGCAAGAAAAAC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGTTTTTCTTGCCATGTaGTATCTCTCTGTTATCCTG +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSVFLAM*YLSVIL
Trigger: CAGGATAACAGAGAGATACCACATGGCAAGAAAAAC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAACTTTCAGAATCCATaGTTTTCCATACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSNFQNP*FSILAI
Trigger: AATGGCAAGTATGGAAAACCATGGATTCTGAAAGTT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACTTTCAGAATCCATaGTTTTCCATACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKNFQNP*FSILAI
Trigger: AATGGCAAGTATGGAAAACCATGGATTCTGAAAGTT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAATGTGTCACAAGAATTaGAGAATGCCTTGGTACACT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRMCHKN*RMPWYT
Trigger: AGTGTACCAAGGCATTCTTCAATTCTTGTGACACAT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTTCATTCCCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: LSLYVSQELKNALVHCSFPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...GAATGAACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCACTTTGTTTTTCTTaGCATGTGGTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFSLCFS*HVVSLC
Trigger: ACAGAGAGATACCACATGGCAAGAAAAACAAAGTGA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAAATTGGCAAGATGCTaGTATCGAATCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRKLARC*YRICFS
Trigger: AGAGAAGCAGATTCGATACCAGCATCTTGCCAATTT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGTTTTTCTTGCCATGTaGTATCTCTCTGTTATCCTG +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRVFLAM*YLSVIL
Trigger: CAGGATAACAGAGAGATACCACATGGCAAGAAAAAC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp ATGCATACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGAAAAGGAAGGCAGTTATaGCAATATTCACATCACACA +
Preference number: 4 (lower is better)
Translates to: MHTLWRLHFIFKHGSLAGKGRQL*QYSHHT
Trigger: TGTGTGATGTGAATATTGCCATAACTGCCTTCCTTT...TCCAGCTAAGGATCCATGCTTAAAGATGAAATGTAGTCGCCATAAAGTATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515316.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAATGTCCTTCACATTTaGCTGAGATCTGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRNVLHI*LRSVFL
Trigger: TAGGAAAACAGATCTCAGTCAAATGTGAAGGACATT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR TCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTATTCTGGATCCCATaGCTTCATTTCCATATCTGT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRLFWIP*LHFHIC
Trigger: ACAGATATGGAAATGAAGTCATGGGATCCAGAATAA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATCACTTTGTTTTTCTTaGCATGTGGTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRSLCFS*HVVSLC
Trigger: ACAGAGAGATACCACATGGCAAGAAAAACAAAGTGA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CCA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: RSQALAVILLMEDLQSLFAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CCA 90 bp ATGCATACTTTATGGCGACTACATTTCATCTTTAAGCATGGATCCTTAGCTGGAGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: MHTLWRLHFIFKHGSLAGAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...TCCAGCTAAGGATCCATGCTTAAAGATGAAATGTAGTCGCCATAAAGTATGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR CCA 90 bp ATTAAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTCAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: IKLSLYVSQELKNALVHCQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...ACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAGTTTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACAAATGTATACATCATaGTCATCACCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRQMYTS*SSPPSS
Trigger: TGATGATGGTGGTGATGACCATGATGTATACATTTG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CCA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGAACTTTCAGAATCCATaGTTTTCCATACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: SQALAVILLMEDLQSLFSNFQNP*FSILAI
Trigger: AATGGCAAGTATGGAAAACCATGGATTCTGAAAGTT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACCTGATATTCTAGTTTaGACTGAAAAGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRPDILV*TEKSRY
Trigger: ATACCTACTCTTTTCAGTGCAAACTAGAATATCAGG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR GCA 90 bp ATTAAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTACAAGAATTGAAGAATaGCTTGGTACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: IKLSLYVSQELKNALVHCTRIEE*LGTLFI
Trigger: AATGAACAGTGTACCAAGGCATTCTTCAATTCTTGT...ACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAGTTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGCAATGCATACTTTATaGCGACTACATTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRAMHTL*RLHFIF
Trigger: AAAGATGAAATGTAGTCGCCATAAAGTATGCATTGC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CCA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAACTTTCAGAATCCATaGTTTTCCATACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRNFQNP*FSILAI
Trigger: AATGGCAAGTATGGAAAACCATGGATTCTGAAAGTT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS GCA 90 bp GGAAATGCAGCCCTGCTCTGCCAACTCGCTGCTTTCTGGAGCTGCTaGACGCGCCGCCGTCTCGAGCCGTCCACTCAGCTCCCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: GNAALLCQLAAFWSC*TRRRLEPSTQLPAP
Trigger: GGGCGCAGGGAGCTGAGTGGACGGCTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS GCA 90 bp GCTGGAAATGCAGCCCTGCTCTGCCAACTCGCTGCTTTCTGGAGCTaGTGCACGCGCCGCCGTCTCGAGCCGTCCACTCAGCTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: AGNAALLCQLAAFWS*CTRRRLEPSTQLPA
Trigger: CGCAGGGAGCTGAGTGGACGGCTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS GCA 90 bp GCCAGCACTGTGCTCGCAGCTCCTGCTGGAAATGCAGCCCTGCTCTaGCAACTCGCTGCTTTCTGGAGCTGCTGCACGCGCCGCCGTCTC +
Preference number: 5 (lower is better)
Translates to: ASTVLAAPAGNAALL*QLAAFWSCCTRRRL
Trigger: GAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACAGTGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000507086.5
ENST00000512648.5
CDS GCA 90 bp TGTGAGCCAGCACTGTGCTCGCAGCTCCTGCTGGAAATGCAGCCCTaGTCTGCCAACTCGCTGCTTTCTGGAGCTGCTGCACGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: CEPALCSQLLLEMQP*SANSLLSGAAARAA
Trigger: GGCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACAGTGCTGGCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000507086.5
ENST00000512648.5
CDS CCA 90 bp GCTGACACCTTGAGCATCTTCCTCTCGCTGGATCCCAGCTACAGTTaGCTCCGGATAGGACGCTTGGCTGGAGCCAGAGGACGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: ADTLSIFLSLDPSYS*LRIGRLAGARGRGS
Trigger: GCTACCTCGTCCTCTGGCTCCAGCCAAGCGTCCTATCCGGAGCCAACTGTAGCTGGGATCCAGCGAGAGGAAGATGCTCAAGGTGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506886.5
CDS CCA 90 bp CTTGAGCATCTTGTTGTGAGCCAGCACTGTGCTCGCAGCTCCTGCTaGAAATGCAGCCCTGCTCTGCCAACTCGCTGCTTTCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LEHLVVSQHCARSSC*KCSPALPTRCFLEL
Trigger: CAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACAGTGCTGGCTCACAACAAGATGCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000507086.5
ENST00000512648.5
CDS TCA 90 bp GAGAGACTGACTGCACCAAGCGGCTGCACACACACACAGTACGGCTaGCACCTTGAGCATCTTCCTCTCGCTGGATCCCAGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: ERLTAPSGCTHTQYG*HLEHLPLAGSQLQL
Trigger: CAACTGTAGCTGGGATCCAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp TATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTGCAGTACGGCTGACACCTaGAGCATACACACGCAGACC +
Preference number: 5 (lower is better)
Translates to: YDHLNHKQGWDRPLGTACSTADT*SIHTQT
Trigger: GGTCTGCGTGTGTATGCTCAAGGTGTCAGCCGTACT...GCAAGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511226.5
ENST00000511905.5
CDS GCA 90 bp ACTTCCACTTTCATGAAGGGCCTTGAACCAGTCCCGCAATCTGTTTaGCACTTCCCTGAACTCCAGGTCACTGCATGCCTGATCGAAGGG +
Preference number: 5 (lower is better)
Translates to: TSTFMKGLEPVPQSV*HFPELQVTACLIEG
Trigger: CCCTTCGATCAGGCATGCAGTGACCTGGAGTTCAGGGAAGTGGCAAACAGATTGCGGGACTGGTTCAAGGCCCTTCATGAAAGTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510403.5
CDS GCA 90 bp ACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCTTCTTTCATCCCTGATCGAAGGGTT +
Preference number: 5 (lower is better)
Translates to: TTGHCLQVDNMGPLH*LWSTPASFIPDRRV
Trigger: AACCCTTCGATCAGGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000541354.5
CDS CCA 90 bp GGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTCATCCCTGATCGAAGGGTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GHCLQVDNMGPLHCL*STPASFIPDRRVFL
Trigger: CAGGAAAACCCTTCGATCAGGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: HCLQVDNMGPLHCLWSTPTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...AGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511226.5
ENST00000511905.5
CDS CCA 90 bp GGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTCATCGTCTCGGAATTTGTTCCACTG +
Preference number: 5 (lower is better)
Translates to: GHCLQVDNMGPLHCL*STPASFIVSEFVPL
Trigger: CAGTGGAACAAATTCCGAGACGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507370.5
CDS-3UTR CAA 90 bp AGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTTCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: RYDHLNHKQGWDRPLGTASSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...AGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS-3UTR CAA 90 bp AGTAGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: SRYDHLNHKQGWDRPLGTTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...AGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
CDS GCA 90 bp ACCACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCTTCTTTCATCGTCTCGGAATTTGTT +
Preference number: 5 (lower is better)
Translates to: TTGHCLQVDNMGPLH*LWSTPASFIVSEFV
Trigger: AACAAATTCCGAGACGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507370.5
CDS-3UTR CAA 90 bp CATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: HPVCKPPVTNADCSLRILTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...CAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CAA 90 bp TCCTGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: SCFFHPVCKPPVTNADCSTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...ACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CAA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEILARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TCCTGCTTCTTTCATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTTCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: SCFFHPVCKPPVTNADCSSSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...ACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATGAAAGAAGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515316.5
CDS-3UTR CAA 90 bp GTTTGCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: VCHFPELQVTACSLNISATTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...AGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp GCTTGTAGTAACCATCTTCATCACACAGGGGGATATACTGTCCTAGGAGCTTCTCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: ACSNHLHHTGGYTVLGASLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...AGAAGCTCCTAGGACAGTATATCCCCCTGTGTGATGAAGATGGTTACTACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp ACTGGGCACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATGGTCTTGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: TGHCLQVDNMGPLHCLWSCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...AGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000511905.5
CDS-3UTR CAA 90 bp GCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTATCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: ATSLNSRSLHALLTFLLVSSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...TACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CAA 90 bp ATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: IIWDPSTAYGLLLLLSSCQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...ACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CAA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCACTTCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEITSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CAA 90 bp GTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGACTTCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: VLVGLSEGHGQCPSHLTETSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT...CTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCTCCGGATAGGACGCTaGGCTGGAGCCAGAGGACGA +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLRIGR*AGARGR
Trigger: TCGTCCTCTGGCTCCAGCCAAGCGTCCTATCCGGAG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506886.5
CDS-3UTR CAA 90 bp AGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAAGTACGGCTGACACCTaGAGCATACACACGCAGACC +
Preference number: 5 (lower is better)
Translates to: RSLHALLTFLLVLVGLSESTADT*SIHTQT
Trigger: GGTCTGCGTGTGTATGCTCAAGGTGTCAGCCGTACT...TTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511226.5
ENST00000511905.5
CDS TCA 90 bp ATTTGTTCCACTGTCCGACTTCCTTGTCATACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCAGAAAATTACCGCCGTCCGACCGCC +
Preference number: 5 (lower is better)
Translates to: ICSTVRLPCHTERLW*AIVYHPENYRRPTA
Trigger: GGCGGTCGGACGGCGGTAATTTTCTGGATGATAAACAATGGCTCACCACAATCTCTCAGTATGACAAGGAAGTCGGACAGTGGAACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000502821.5
ENST00000504953.5
ENST00000505187.5
ENST00000506697.5
ENST00000506886.5
ENST00000507086.5
ENST00000507370.5
ENST00000509854.5
ENST00000510403.5
ENST00000510741.5
ENST00000511226.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512042.1
ENST00000512648.5
ENST00000512681.5
ENST00000515316.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: FLLVLVGLSEGHGQCPSHSSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...ATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507370.5
ENST00000511226.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TCGCCACTAGCAAAATCTCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SPLAKSPEISKSIAQSATLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...TGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGAGATTTTGCTAGTGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATACGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: KPPVTNADCSLRILSNAYELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...GTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGTACGGCTGACACCTaGAGCATCTTCCTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKSTADT*SIFLSL
Trigger: CAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTACT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAAGTACGGCTGACACCTaGAGCATCTTCCTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARSTADT*SIFLSL
Trigger: CAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTACT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTTGTCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: CWYRICFSQASAMFLSSCQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...ACAAGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CAA 90 bp CTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LHALLTFLLVLVGLSEGHQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
ENST00000515143.5
CDS-3UTR CAA 90 bp AGGTATGACCATCTGAACCACAAACAGGGCTGGGATAGACCACTGGGCACTGCTGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: RYDHLNHKQGWDRPLGTAELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...AGCAGTGCCCAGTGGTCTATCCCAGCCCTGTTTGTGGTTCAGATGGTCATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp GCAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: ARCWYRICFSQASAMFLSELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...AGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp CTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: LVLVGLSEGHGQCPSHLTELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...AGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGGATCCCAGCTACAGTaGGCTCCGGATAGGACGCTT +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFGSQLQ*APDRTL
Trigger: AAGCGTCCTATCCGGAGCCAACTGTAGCTGGGATCC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARSSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSSSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CATCCTGTGTGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: HPVCKPPVTNADCSLRILCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...CAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGACAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp ATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAACCTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: ICNTIYSGSHDFISISVNLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...GTTGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp CAAGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: QDAGIESASLRPQQCFCLELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...AAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGGATCCCAGCTACAGTaGGCTCCGGATAGGACGCTT +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRGSQLQ*APDRTL
Trigger: AAGCGTCCTATCCGGAGCCAACTGTAGCTGGGATCC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCAGTACGGCTGACACCTaGAGCATCTGGGAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFSTADT*SIWERR
Trigger: TCTCCTCTCCCAGATGCTCAAGGTGTCAGCCGTACT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511269.5
CDS GCA 90 bp ATTCTAGTTTGCACTGTGTGTAAGCCTCCGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACA +
Preference number: 5 (lower is better)
Translates to: ILVCTVCKPPVTNAD*SLRILSNAYFMATT
Trigger: TGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGTGCAAACTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502741.5
ENST00000507086.5
ENST00000515143.5
CDS-3UTR CAA 90 bp TTCATCATCCTCATCATCAGTCCATTCATGAAAATCGCCACTAGCAAAATCTCCTCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: FIILIISPFMKIATSKISSSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...GGAGATTTTGCTAGTGGCGATTTTCATGAATGGACTGATGATGAGGATGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TGTAAGCCTCCGGTGACTAATGCAGACTGCAGTCTGAGAATCTTGAGCAATGCATGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: CKPPVTNADCSLRILSNACSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...TGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR CAA 90 bp GCCACTTCCCTGAACTCCAGGTCACTGCATGCTCTCTTAACATTTCTGCTTGTATGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: ATSLNSRSLHALLTFLLVCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...TACAAGCAGAAATGTTAAGAGAGCATGCAGTGACCTGGAGTTCAGGGAAGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515143.5
CDS-3UTR CAA 90 bp ATAATATGGGACCCCTCCACTGCCTATGGTCTACTCCTGCTTCTTTCATCCTGTTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: IIWDPSTAYGLLLLLSSCCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...ACAGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000515316.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCACCACTGGGCACTGCTaGCAGGTGGATAATATGGGA +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFTTGHC*QVDNMG
Trigger: TCCCATATTATCCACCTGCAAGCAGTGCCCAGTGGT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACTGGCAAGGTGGGTCTaGCTGTCTCTGGAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRLARWV*LSLEAV
Trigger: TACTGCTTCCAGAGACAGCAAGACCCACCTTGCCAG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp ACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCATGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: TFLLVLVGLSEGHGQCPSCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...TGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp GCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: ALLTFLLVLVGLSEGHGQCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TCACTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGAAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: SLHALLTFLLVLVGLSEGNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...TCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp CTGCATGCTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: LHALLTFLLVLVGLSEGHNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...ATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGCATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAGTACGGCTGACACCTaGAGCATACACACGCAGACC +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRSTADT*SIHTQT
Trigger: GGTCTGCGTGTGTATGCTCAAGGTGTCAGCCGTACT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511905.5
ENST00000541354.5
CDS TCA 90 bp TCATCGTCTCGGAATTTGTTCCACTGTCCGACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCATTGTTTATCATCCAGAAAATTACCG +
Preference number: 5 (lower is better)
Translates to: SSSRNLFHCPTSLSY*EIVVSHCLSSRKLP
Trigger: CGGTAATTTTCTGGATGATAAACAATGGCTCACCACAATCTCTCAGTATGACAAGGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000507370.5
ENST00000509854.5
ENST00000510403.5
ENST00000510741.5
ENST00000511226.5
ENST00000511269.5
ENST00000511905.5
ENST00000512648.5
ENST00000515316.5
ENST00000541354.5
CDS TCA 90 bp ACTTCGTCTCGGAATTTGTTCCACTGTCCGACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCATTGTTTATCATCCAGAAAATTACCG +
Preference number: 5 (lower is better)
Translates to: TSSRNLFHCPTSLSY*EIVVSHCLSSRKLP
Trigger: CGGTAATTTTCTGGATGATAAACAATGGCTCACCACAATCTCTCAGTATGACAAGGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000502741.5
ENST00000506697.5
ENST00000506886.5
ENST00000507086.5
ENST00000511531.5
ENST00000512042.1
CDS TCA 90 bp TTGCAGTCTCGGAATTTGTTCCACTGTCCGACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCATTGTTTATCATCCAGAAAATTACCG +
Preference number: 5 (lower is better)
Translates to: LQSRNLFHCPTSLSY*EIVVSHCLSSRKLP
Trigger: CGGTAATTTTCTGGATGATAAACAATGGCTCACCACAATCTCTCAGTATGACAAGGAAGTCGGACAGTGGAACAAATTCCGAGACTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512681.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGACTGAGATCGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: LVGLSEGHGQCPSHLTEIELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...GATCTCAGTCAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTCCTTCACATTTGGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 5 (lower is better)
Translates to: LLVLVGLSEGHGQCPSHLALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...CAAATGTGAAGGACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGACTTCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSTSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCACTTCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFTSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTTGCAGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSLQSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACTGCAA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512681.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATCATCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRSSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGATGA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000510741.5
ENST00000511269.5
ENST00000511905.5
ENST00000541354.5
CDS-3UTR CAA 90 bp ACTCTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: TLLTFLLVLVGLSEGHGQCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...TTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGACAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp ATTAAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTCAGCCAAGTGAGTCCTaGCAAATTGGCAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: IKLSLYVSQELKNALVHCQPSES*QIGKML
Trigger: CAGCATCTTGCCAATTTGCAAGGACTCACTTGGCTG...ACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAGTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCTGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGTCACTTTGTTTTTCTaGCCATGTGGTATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSVTLFF*PCGISL
Trigger: CAGAGAGATACCACATGGCAAGAAAAACAAAGTGAC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGGTCACTTTGTTTTTCTaGCCATGTGGTATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKVTLFF*PCGISL
Trigger: CAGAGAGATACCACATGGCAAGAAAAACAAAGTGAC...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGTCACTTTGTTTTTCTaGCCATGTGGTATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARVTLFF*PCGISL
Trigger: CAGAGAGATACCACATGGCAAGAAAAACAAAGTGAC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAATTCTGCTCCCTAAGTaGCTGGTCAGAAAGATAAAG +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARILLPK*LVRKIK
Trigger: CTTTATCTTTCTGACCAGCAACTTAGGGAGCAGAAT...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAACTTCGTCTCGGAATTaGTTCCACTGTCCGACTTCC +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRTSSRN*FHCPTS
Trigger: GGAAGTCGGACAGTGGAACAAATTCCGAGACGAAGT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357154.7
ENST00000502330.5
ENST00000506886.5
ENST00000511531.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGCATGTGGATGTGATCTaGTGTGATCATCACTACTGT +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKHVDVI*CDHHYC
Trigger: ACAGTAGTGATGATCACACAAGATCACATCCACATG...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421836.6
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGATGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CAA 90 bp TTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: FSCHVVSLCYPDSTRSSKCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...CTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CAA 90 bp CTCTTAACATTTCTGCTTGTACTGGTGGGCTTATCTGAAGGACATGGGCAATGTGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: LLTFLLVLVGLSEGHGQCELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...ACATTGCCCATGTCCTTCAGATAAGCCCACCAGTACAAGCAGAAATGTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGAGCTTCTTTACCCCTaGCCGCTTCTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRELLYP*PLLNIA
Trigger: AGCAATATTCAGAAGCGGCAAGGGGTAAAGAAGCTC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AAACTGTCCTTGTATGTGTCACAAGAATTGAAGAATGCCTTGGTACACTGTTCAAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: KLSLYVSQELKNALVHCSNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...TGAACAGTGTACCAAGGCATTCTTCAATTCTTGTGACACATACAAGGACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: QSATPFILDPMTSFPYLSNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...TGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp AGATGCTGGTATCGAATCTGCTTCTCTCAGGCCTCAGCAATGTTTTTGTCTTCTGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 5 (lower is better)
Translates to: RCWYRICFSQASAMFLSSALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...AGAAGACAAAAACATTGCTGAGGCCTGAGAGAAGCAGATTCGATACCAGCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TCCGGAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGTGGATGTGATCTaGTGTGATCATCACTACTGT +
Preference number: 5 (lower is better)
Translates to: SGDLKIYSTICNTIYSGSHVDVI*CDHHYC
Trigger: ACAGTAGTGATGATCACACAAGATCACATCCACATG...GGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTCCGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502821.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGATTGTGGTGAGCCATaGTTTATCATCCAGAAAATT +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSDCGEP*FIIQKI
Trigger: AATTTTCTGGATGATAAACAATGGCTCACCACAATC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TGTTTTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: CFSCHVVSLCYPDSTRSSELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...GCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TTTCTTGCCATGTGGTATCTCTCTGTTATCCTGACTCAACTAGGTCTAGCAAGAGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: FLAMWYLSVILTQLGLARELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...TCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGGCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp GAGATCTCAAAATCTATAGCACAATCTGCAACACCATTTATTCTGGATCCCATGTGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: EISKSIAQSATPFILDPMCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...CATGGGATCCAGAATAAATGGTGTTGCAGATTGTGCTATAGATTTTGAGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAAACACTGCCATGACATaGTGTTGGCTTGTAGTAACC +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRNTAMT*CWLVVT
Trigger: GGTTACTACAAGCCAACACAATGTCATGGCAGTGTT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGTCACTTTGTTTTTCTaGCCATGTGGTATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSVTLFF*PCGISL
Trigger: CAGAGAGATACCACATGGCAAGAAAAACAAAGTGAC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCATTCTGCTCCCTAAGTaGCTGGTCAGAAAGATAAAG +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFILLPK*LVRKIK
Trigger: CTTTATCTTTCTGACCAGCAACTTAGGGAGCAGAAT...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATGCCATGACATTGTGTaGGCTTGTAGTAACCATCTT +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRCHDIV*ACSNHL
Trigger: AAGATGGTTACTACAAGCCAACACAATGTCATGGCA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGTCACTTTGTTTTTCTaGCCATGTGGTATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRVTLFF*PCGISL
Trigger: CAGAGAGATACCACATGGCAAGAAAAACAAAGTGAC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511531.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAATTCTGCTCCCTAAGTaGCTGGTCAGAAAGATAAAG +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRILLPK*LVRKIK
Trigger: CTTTATCTTTCTGACCAGCAACTTAGGGAGCAGAAT...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGATTGTGGTGAGCCATaGTTTATCATCCAGAAAATT +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSDCGEP*FIIQKI
Trigger: AATTTTCTGGATGATAAACAATGGCTCACCACAATC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CAATCTGCAACACCATTTATTCTGGATCCCATGACTTCATTTCCATATCTGTCAGATTGTGGTGAGCCATaGTTTATCATCCAGAAAATT +
Preference number: 5 (lower is better)
Translates to: QSATPFILDPMTSFPYLSDCGEP*FIIQKI
Trigger: AATTTTCTGGATGATAAACAATGGCTCACCACAATC...TGACAGATATGGAAATGAAGTCATGGGATCCAGAATAAATGGTGTTGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502821.5
ENST00000505187.5
ENST00000507370.5
ENST00000511905.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGATTGTGGTGAGCCATaGTTTATCATCCAGAAAATT +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFDCGEP*FIIQKI
Trigger: AATTTTCTGGATGATAAACAATGGCTCACCACAATC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000535728.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp CGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 5 (lower is better)
Translates to: RSQALAVILLMEDLQSLFALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...GAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp TCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGATTTACAAAGTTTGTTCTCGGCACTAGCTGTCATTTaGCTTATGGAAGATTTACAA +
Preference number: 5 (lower is better)
Translates to: SQALAVILLMEDLQSLFSALAVI*LMEDLQ
Trigger: TTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGC...CGAGAACAAACTTTGTAAATCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AAACTTTGTTTCTTGATAGGGTTCCATAGCACTCAGAGTACTCTCTTAACATTTTGCAGTCTGAGAATCTaGAGCAATGCATACTTTATG +
Preference number: 5 (lower is better)
Translates to: KLCFLIGFHSTQSTLLTFCSLRI*SNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCA...AAATGTTAAGAGAGTACTCTGAGTGCTATGGAACCCTATCAAGAAACAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS-3UTR CAA 90 bp CAGTCTGAGAATCTTGAGCAATGCATACTTTATGGCGACTACATTTCATCTTTAGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: QSENLEQCILYGDYISSLELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...TAAAGATGAAATGTAGTCGCCATAAAGTATGCATTGCTCAAGATTCTCAGACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502821.5
ENST00000505187.5
CDS-3UTR CAA 90 bp AGAAAATTAACATGTACGATCCCAAGCACTAGCTGTCATTTTGCTTATGGAAGAGAATTGAAGAATGCCTaGGTACACTGTTCATTCTTA +
Preference number: 5 (lower is better)
Translates to: RKLTCTIPSTSCHFAYGRELKNA*VHCSFL
Trigger: TAAGAATGAACAGTGTACCAAGGCATTCTTCAATTC...TCTTCCATAAGCAAAATGACAGCTAGTGCTTGGGATCGTACATGTTAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000504953.5
ENST00000506886.5
ENST00000510741.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512681.5
ENST00000535728.5
ENST00000541354.5
CDS-3UTR CAA 90 bp AAACTTTGTTTCTTGATAGGGTTCCATAGCACTCAGAGTACTCTCTTAACATTTGATTGTGGTGAGCCATaGTTTATCATCCAGAAAATT +
Preference number: 5 (lower is better)
Translates to: KLCFLIGFHSTQSTLLTFDCGEP*FIIQKI
Trigger: AATTTTCTGGATGATAAACAATGGCTCACCACAATC...AAATGTTAAGAGAGTACTCTGAGTGCTATGGAACCCTATCAAGAAACAAAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502741.5
ENST00000507086.5
CDS GCA 72 bp GCCCTGCTCTGCCAACTCGCTGCTTTCTGGAGCTGCTaGACGCGCCGCCGTCTCGAGCCGTCCACTCAGCTC +
Preference number: 6 (lower is better)
Translates to: ALLCQLAAFWSC*TRRRLEPSTQL
Trigger: GAGCTGAGTGGACGGCTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS GCA 72 bp GCAGCCCTGCTCTGCCAACTCGCTGCTTTCTGGAGCTaGTGCACGCGCCGCCGTCTCGAGCCGTCCACTCAG +
Preference number: 6 (lower is better)
Translates to: AALLCQLAAFWS*CTRRRLEPSTQ
Trigger: CTGAGTGGACGGCTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
CDS GCA 72 bp CTGCAGCCACCGCCGCGGCAGCTGCGAGAGACTGACTaGACCAAGCGGCTGCACACACACACAGTACGGCTG +
Preference number: 6 (lower is better)
Translates to: LQPPPRQLRETD*TKRLHTHTVRL
Trigger: CAGCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGTCAGTCTCTCGCAGCTGCCGCGGCGGTGGCTGCAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000502821.5
ENST00000504953.5
ENST00000505187.5
ENST00000506697.5
ENST00000506886.5
ENST00000507086.5
ENST00000507370.5
ENST00000509854.5
ENST00000510403.5
ENST00000510741.5
ENST00000511226.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512042.1
ENST00000512648.5
ENST00000512681.5
ENST00000515316.5
ENST00000541354.5
CDS CCA 72 bp GGAAATGCAGCCCTGCTCTGCCAACTCGCTGCTTTCTaGAGCTGCTGCACGCGCCGCCGTCTCGAGCCGTCC +
Preference number: 6 (lower is better)
Translates to: GNAALLCQLAAF*SCCTRRRLEPS
Trigger: GGACGGCTCGAGACGGCGGCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000507086.5
CDS GCA 72 bp GTGCTCGCAGCTCCTGCTGGAAATGCAGCCCTGCTCTaGCAACTCGCTGCTTTCTGGAGCTGCTGCACGCGC +
Preference number: 6 (lower is better)
Translates to: VLAAPAGNAALL*QLAAFWSCCTR
Trigger: GCGCGTGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000507086.5
ENST00000512648.5
CDS GCA 72 bp GCACTGTGCTCGCAGCTCCTGCTGGAAATGCAGCCCTaGTCTGCCAACTCGCTGCTTTCTGGAGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: ALCSQLLLEMQP*SANSLLSGAAA
Trigger: TGCAGCAGCTCCAGAAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000507086.5
ENST00000512648.5
CDS CAA 72 bp CTTGAGCATCTTCCTCTCGCTGGATCCCAGCTACAGTaGGCTCCGGATAGGACGCTTGGCTGGAGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LEHLPLAGSQLQ*APDRTLGWSQR
Trigger: CCTCTGGCTCCAGCCAAGCGTCCTATCCGGAGCCAACTGTAGCTGGGATCCAGCGAGAGGAAGATGCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS TCA 72 bp ACTGCACCAAGCGGCTGCACACACACACAGTACGGCTaGCACCTTGAGCATCTTCCTCTCGCTGGATCCCAG +
Preference number: 6 (lower is better)
Translates to: TAPSGCTHTQYG*HLEHLPLAGSQ
Trigger: CTGGGATCCAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS TCA 72 bp ACTGCACCAAGCGGCTGCACACACACACAGTACGGCTaGCACCTTGAGCATCTGGGAGAGGAGACACAACGG +
Preference number: 6 (lower is better)
Translates to: TAPSGCTHTQYG*HLEHLGEETQR
Trigger: CCGTTGTGTCTCCTCTCCCAGATGCTCAAGGTGTCAGCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506697.5
ENST00000511269.5
ENST00000512042.1
CDS TCA 72 bp ACTGCACCAAGCGGCTGCACACACACACAGTACGGCTaGCACCTTGAGCATACACACGCAGACCCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: TAPSGCTHTQYG*HLEHTHADPEE
Trigger: CTCCTCTGGGTCTGCGTGTGTATGCTCAAGGTGTCAGCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000509854.5
ENST00000511226.5
ENST00000511905.5
ENST00000541354.5
CDS CCA 72 bp CTTGTTGTGAGCCAGCACTGTGCTCGCAGCTCCTGCTaGAAATGCAGCCCTGCTCTGCCAACTCGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: LVVSQHCARSSC*KCSPALPTRCF
Trigger: AAAGCAGCGAGTTGGCAGAGCAGGGCTGCATTTCCAGCAGGAGCTGCGAGCACAGTGCTGGCTCACAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357154.7
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000507086.5
ENST00000512648.5
CDS CCA 72 bp TTGAGCATCTTCCTCTCGCTGGATCCCAGCTACAGTTaGCTCCGGATAGGACGCTTGGCTGGAGCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: LSIFLSLDPSYS*LRIGRLAGARG
Trigger: TCCTCTGGCTCCAGCCAAGCGTCCTATCCGGAGCCAACTGTAGCTGGGATCCAGCGAGAGGAAGATGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS CAA 72 bp CAAGCGGCTGCACACACACACAGTACGGCTGACACCTaGAGCATCTTCCTCTCGCTGGATCCCAGCTACAGT +
Preference number: 6 (lower is better)
Translates to: QAAAHTHSTADT*SIFLSLDPSYS
Trigger: ACTGTAGCTGGGATCCAGCGAGAGGAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTGTGTGCAGCCGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504953.5
ENST00000506886.5
ENST00000511531.5
CDS TCA 72 bp ACTGCACCAAGCGGCTGCACACACACACAGTACGGCTaGCACCTTGAGCATCTTGTTGTGAGCCAGCACTGT +
Preference number: 6 (lower is better)
Translates to: TAPSGCTHTQYG*HLEHLVVSQHC
Trigger: ACAGTGCTGGCTCACAACAAGATGCTCAAGGTGTCAGCCGTACTGTGTGTGTGTGCAGCCGCTTGGTGCAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000502821.5
ENST00000505187.5
ENST00000507086.5
ENST00000507370.5
ENST00000510403.5
ENST00000510741.5
ENST00000512648.5
ENST00000512681.5
ENST00000515316.5
CDS GCA 72 bp CACTGCTTGCAGGTGGATAATATGGGACCCCTCCACTaGCTATGGTCTACTCCTGCTTCTTTCATCGTCTCG +
Preference number: 6 (lower is better)
Translates to: HCLQVDNMGPLH*LWSTPASFIVS
Trigger: CGAGACGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507370.5
CDS CCA 72 bp CTCCAGGTCACTGCATGCCTGATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATAATCATCGTCTCGGAA +
Preference number: 6 (lower is better)
Translates to: LQVTACLIEGFS*TPSAEIIIVSE
Trigger: TTCCGAGACGATGATTATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGATCAGGCATGCAGTGACCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510403.5
CDS CCA 72 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTCATCCCTGATCGAAGG +
Preference number: 6 (lower is better)
Translates to: LQVDNMGPLHCL*STPASFIPDRR
Trigger: CCTTCGATCAGGGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000541354.5
CDS CCA 72 bp TTGCAGGTGGATAATATGGGACCCCTCCACTGCCTATaGTCTACTCCTGCTTCTTTCATCGTCTCGGAATTT +
Preference number: 6 (lower is better)
Translates to: LQVDNMGPLHCL*STPASFIVSEF
Trigger: AAATTCCGAGACGATGAAAGAAGCAGGAGTAGACCATAGGCAGTGGAGGGGTCCCATATTATCCACCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507370.5
CDS CCA 72 bp CTCCTGCTTCTTTCATCCCTGATCGAAGGGTTTTCCTaGACTCCAAGTGCGGAAATAATCATCGTCTCGGAA +
Preference number: 6 (lower is better)
Translates to: LLLLSSLIEGFS*TPSAEIIIVSE
Trigger: TTCCGAGACGATGATTATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGATCAGGGATGAAAGAAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000541354.5
CDS GCA 72 bp TGCATGCCTGATCGAAGGGTTTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTCGGAATTTGTTCCACT +
Preference number: 6 (lower is better)
Translates to: CMPDRRVFLDSK*GNNHRLGICST
Trigger: AGTGGAACAAATTCCGAGACGATGATTATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGATCAGGCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510403.5
CDS GCA 72 bp AGAGAGCCTGATCGAAGGGTTTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTCGGAATTTGTTCCACT +
Preference number: 6 (lower is better)
Translates to: REPDRRVFLDSK*GNNHRLGICST
Trigger: AGTGGAACAAATTCCGAGACGATGATTATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGATCAGGCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515316.5
CDS CAA 72 bp GACTTCCTTGTCATACTGAGAGATTGTGGTGAGCCATaGTTTATCATCCAGAAAATTACCGCCGTCCGACCG +
Preference number: 6 (lower is better)
Translates to: DFLVILRDCGEP*FIIQKITAVRP
Trigger: CGGTCGGACGGCGGTAATTTTCTGGATGATAAACAATGGCTCACCACAATCTCTCAGTATGACAAGGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000502821.5
ENST00000504953.5
ENST00000505187.5
ENST00000506697.5
ENST00000506886.5
ENST00000507086.5
ENST00000507370.5
ENST00000509854.5
ENST00000510403.5
ENST00000510741.5
ENST00000511226.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512042.1
ENST00000512648.5
ENST00000512681.5
ENST00000515316.5
ENST00000541354.5
CDS GCA 72 bp CTAAAGCCTGATCGAAGGGTTTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTCGGAATTTGTTCCACT +
Preference number: 6 (lower is better)
Translates to: LKPDRRVFLDSK*GNNHRLGICST
Trigger: AGTGGAACAAATTCCGAGACGATGATTATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGATCAGGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357545.9
ENST00000504953.5
ENST00000509854.5
ENST00000510741.5
ENST00000511269.5
ENST00000512648.5
ENST00000515143.5
CDS GCA 72 bp TGCACTGTGTGTAAGCCTCCGGTGACTAATGCAGACTaGAGTCTGAGAATCTTGAGCAATGCATACTTTATG +
Preference number: 6 (lower is better)
Translates to: CTVCKPPVTNAD*SLRILSNAYFM
Trigger: CATAAAGTATGCATTGCTCAAGATTCTCAGACTGCAGTCTGCATTAGTCACCGGAGGCTTACACACAGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502741.5
ENST00000507086.5
ENST00000515143.5
CDS GCA 72 bp TTCATCCCTGATCGAAGGGTTTTCCTGGACTCCAAGTaGGGAAATAATCATCGTCTCGGAATTTGTTCCACT +
Preference number: 6 (lower is better)
Translates to: FIPDRRVFLDSK*GNNHRLGICST
Trigger: AGTGGAACAAATTCCGAGACGATGATTATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGATCAGGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511226.5
ENST00000511905.5
ENST00000541354.5
CDS TCA 72 bp ACTGTCCGACTTCCTTGTCATACTGAGAGATTGTGGTaGGCCATTGTTTATCATCCAGAAAATTACCGCCGT +
Preference number: 6 (lower is better)
Translates to: TVRLPCHTERLW*AIVYHPENYRR
Trigger: ACGGCGGTAATTTTCTGGATGATAAACAATGGCTCACCACAATCTCTCAGTATGACAAGGAAGTCGGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000502821.5
ENST00000504953.5
ENST00000505187.5
ENST00000506697.5
ENST00000506886.5
ENST00000507086.5
ENST00000507370.5
ENST00000509854.5
ENST00000510403.5
ENST00000510741.5
ENST00000511226.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512042.1
ENST00000512648.5
ENST00000512681.5
ENST00000515316.5
ENST00000541354.5
CDS TCA 72 bp CGGAATTTGTTCCACTGTCCGACTTCCTTGTCATACTaGGAGATTGTGGTGAGCCATTGTTTATCATCCAGA +
Preference number: 6 (lower is better)
Translates to: RNLFHCPTSLSY*EIVVSHCLSSR
Trigger: TCTGGATGATAAACAATGGCTCACCACAATCTCTCAGTATGACAAGGAAGTCGGACAGTGGAACAAATTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000357154.7
ENST00000357545.9
ENST00000421836.6
ENST00000502330.5
ENST00000502741.5
ENST00000502821.5
ENST00000504953.5
ENST00000505187.5
ENST00000506697.5
ENST00000506886.5
ENST00000507086.5
ENST00000507370.5
ENST00000509854.5
ENST00000510403.5
ENST00000510741.5
ENST00000511226.5
ENST00000511269.5
ENST00000511531.5
ENST00000511905.5
ENST00000512042.1
ENST00000512648.5
ENST00000512681.5
ENST00000515143.5
ENST00000515316.5
ENST00000541354.5
CDS GCA 72 bp CTAAAGCCTGATCGAAGGGTTTTCCTGGACTCCAAGTaGGGAAATAATCATCCTGGTTTTACTTCATATCAC +
Preference number: 6 (lower is better)
Translates to: LKPDRRVFLDSK*GNNHPGFTSYH
Trigger: GTGATATGAAGTAAAACCAGGATGATTATTTCCGCACTTGGAGTCCAGGAAAACCCTTCGATCAGGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535728.5