RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPOCK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000107742

Ensembl transcript IDs: ENST00000317376.8, ENST00000373109.7, ENST00000412663.5, ENST00000460053.1, ENST00000463279.6, ENST00000469121.5, ENST00000483699.1, ENST00000495888.1, ENST00000536168.2

Found 788 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGGCCGGCCTGCTGCCGCCCCCTCGCTGCTGTGGCCGGGCTGCTaGCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCT +
Preference number: 1 (lower is better)
Translates to: MGRPAAAPSLLWPGC*PGSGRRLRLICAGP
Trigger: AGGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGGGCGGCAGCAGGCCGGCCCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 90 bp CTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCTaGAGGTGCTTCGGGAAGGCCTCGCGGGGCTCCAGGCTCCTGCGG +
Preference number: 1 (lower is better)
Translates to: LPRKRQETAAHLRWA*RCFGKASRGSRLLR
Trigger: CCGCAGGAGCCTGGAGCCCCGCGAGGCCTTCCCGAAGCACCTGCAGGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CCA 90 bp GGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTaGGCCTGCAGGTGCTTCGGGAAGGCCTCGCGGGGCTCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: GLLPRKRQETAAHLR*ACRCFGKASRGSRL
Trigger: GAGCCTGGAGCCCCGCGAGGCCTTCCCGAAGCACCTGCAGGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 90 bp GGGCCTGCAGGTGCTTCGGGAAGGCCTCGCGGGGCTCCAGGCTCCTaGGGCTGGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAGCAG +
Preference number: 1 (lower is better)
Translates to: GPAGASGRPRGAPGS*GWTGRMWGEGGDQQ
Trigger: CTGCTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGCCTGGAGCCCCGCGAGGCCTTCCCGAAGCACCTGCAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 90 bp AGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCTGCAGGTaGTTCGGGAAGGCCTCGCGGGGCTCCAGGCTCCTGCGGCTGGAC +
Preference number: 1 (lower is better)
Translates to: RKRQETAAHLRWACR*FGKASRGSRLLRLD
Trigger: GTCCAGCCGCAGGAGCCTGGAGCCCCGCGAGGCCTTCCCGAAGCACCTGCAGGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CCA 90 bp GCAGGTGCTTCGGGAAGGCCTCGCGGGGCTCCAGGCTCCTGCGGCTaGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAGCAGCCCATC +
Preference number: 1 (lower is better)
Translates to: AGASGRPRGAPGSCG*TGRMWGEGGDQQPI
Trigger: GATGGGCTGCTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGCCTGGAGCCCCGCGAGGCCTTCCCGAAGCACCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR TCA 90 bp TTGGCAGATCAAACAGCCAGCGAGTCGGAGGGAGGCCTAGGCCAGTaGCACATGGATTCCGGATGGGCCGGCCTGCTGCCGCCCCCTCGC +
Preference number: 1 (lower is better)
Translates to: LADQTASESEGGLGQ*HMDSGWAGLLPPPR
Trigger: GCGAGGGGGCGGCAGCAGGCCGGCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCCGACTCGCTGGCTGTTTGATCTGCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CCA 90 bp GACCCCCTCTCCTCACCCTGTTCTACCTGCACCACCTGGGCCACCTaGGACAGACCTCAGACAGCTTGGCGAGGCACCCTGTCCCTGGCC +
Preference number: 1 (lower is better)
Translates to: DPLSSPCSTCTTWAT*DRPQTAWRGTLSLA
Trigger: GGCCAGGGACAGGGTGCCTCGCCAAGCTGTCTGAGGTCTGTCCCAGGTGGCCCAGGTGGTGCAGGTAGAACAGGGTGAGGAGAGGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp CTCGGGATGTCTGGGTCTCCTTCTGTGGTGTCTCTCCCCTGGGACTaGCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTC +
Preference number: 1 (lower is better)
Translates to: LGMSGSPSVVSLPWD*RQPAASRRPQVSKL
Trigger: GAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGGCAGTCCCAGGGGAGAGACACCACAGAAGGAGACCCAGACATCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp TTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTGGGCGTCCTaGCCCGTCTCATCTGAGGCTGGTGGGGATGTCACACCACATCGG +
Preference number: 1 (lower is better)
Translates to: LGIRQRDRACCGWAS*PVSSEAGGDVTPHR
Trigger: CCGATGTGGTGTGACATCCCCACCAGCCTCAGATGAGACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 90 bp AAGGGACAGGGCTTGCTGTGGCTGGGCGTCCTGGCCCGTCTCATCTaGGGCTGGTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAG +
Preference number: 1 (lower is better)
Translates to: KGQGLLWLGVLARLI*GWWGCHTTSAQFWE
Trigger: CTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCACCAGCCTCAGATGAGACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp GCTGAGGGAAGTGGGGCTGGACATGGCCTGTGGGTGGCTCTCCCCTaGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: AEGSGAGHGLWVALP*QEEDHGLRVRKGCS
Trigger: GCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGCCCCACTTCCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp AACTTCCTCGGGATGTCTGGGTCTCCTTCTGTGGTGTCTCTCCCCTaGGACTGCCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCA +
Preference number: 1 (lower is better)
Translates to: NFLGMSGSPSVVSLP*DCRQPAASRRPQVS
Trigger: TGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGGCAGTCCCAGGGGAGAGACACCACAGAAGGAGACCCAGACATCCCGAGGAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp TCGGCAGCTGCTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTaGTCTGGGCAGGACAGGAGTGTTAAGGGTCAGGGAGGAGGTGGG +
Preference number: 1 (lower is better)
Translates to: SAAASLRGLRDSSLC*SGQDRSVKGQGGGG
Trigger: CCCACCTCCTCCCTGACCCTTAACACTCCTGTCCTGCCCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGCAGCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp AGATCTGACATCCACCTCCCCCAGCACCCATGGGCCAAGGAGGCCTaGGGCAGCCAAGGGGAGTTCCAGGACCAAGCAAGCAAGAAACCG +
Preference number: 1 (lower is better)
Translates to: RSDIHLPQHPWAKEA*GSQGEFQDQASKKP
Trigger: CGGTTTCTTGCTTGCTTGGTCCTGGAACTCCCCTTGGCTGCCCCAGGCCTCCTTGGCCCATGGGTGCTGGGGGAGGTGGATGTCAGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 90 bp GATGCCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTaGAGCTCATGGAAGGCTGAAGGCAGGCGGGCTGGAGTGAAGGGG +
Preference number: 1 (lower is better)
Translates to: DANGPHPLQSEVGSR*SSWKAEGRRAGVKG
Trigger: CCCCTTCACTCCAGCCCGCCTGCCTTCAGCCTTCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp CTCCCCTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTaGAGCTTTCGGCAGCTGCTTCTCTCCGGGGTCTCAGGGACAGCT +
Preference number: 1 (lower is better)
Translates to: LPWQEEDHGLRVRKG*SFRQLLLSGVSGTA
Trigger: AGCTGTCCCTGAGACCCCGGAGAGAAGCAGCTGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp TGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCAGAGTaGGGAAAGGCTGCAGCTTTCGGCAGCTGCTTCTCTCCGGGGTCT +
Preference number: 1 (lower is better)
Translates to: CGWLSPGRRKIMVSE*GKAAAFGSCFSPGS
Trigger: AGACCCCGGAGAGAAGCAGCTGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp CTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGTGTaGCCTCAGAGCCCGGCTGCACCTGTCCTGTTCCCTCTGACTTCT +
Preference number: 1 (lower is better)
Translates to: LTLLRGCWGTARCEV*PQSPAAPVLFPLTS
Trigger: AGAAGTCAGAGGGAACAGGACAGGTGCAGCCGGGCTCTGAGGCCACACCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp TGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATaGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCAGCTGCTTCT +
Preference number: 1 (lower is better)
Translates to: WTWPVGGSPLAGGRS*SQSAERLQLSAAAS
Trigger: AGAAGCAGCTGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 90 bp AGAAGACCCAGAGACAGAGAGAGCACGTGTCCCAGGAGCGGAGGGTaGCATCAAGAGGACAGGGGACACCCTTCCTCTGAACTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: RRPRDRESTCPRSGG*HQEDRGHPSSELLP
Trigger: AGGAAGGAGTTCAGAGGAAGGGTGTCCCCTGTCCTCTTGATGTCACCCTCCGCTCCTGGGACACGTGCTCTCTCTGTCTCTGGGTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp AAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCAGCTaGTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: KIMVSECGKAAAFGS*FSPGSQGQLSLLVW
Trigger: CCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGCAGCTGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp CTGTGTAACCACCACCCAGTGTCCCCAAGAGAGCAGCCCAGATCATaGCTCCACCACGAGACCCAGAGAAAAGGGACAGGCTATTCCAGG +
Preference number: 1 (lower is better)
Translates to: LCNHHPVSPREQPRS*LHHETQRKGTGYSR
Trigger: CCTGGAATAGCCTGTCCCTTTTCTCTGGGTCTCGTGGTGGAGCCATGATCTGGGCTGCTCTCTTGGGGACACTGGGTGGTGGTTACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 90 bp GGTTCACACACAGGCACACGCACACACGCTGCACTCACCACGCACTaGAGGGCATCACAGCCCCAAGTCTGGGTAAGAAATTCTCCACCA +
Preference number: 1 (lower is better)
Translates to: GSHTGTRTHAALTTH*RASQPQVWVRNSPP
Trigger: TGGTGGAGAATTTCTTACCCAGACTTGGGGCTGTGATGCCCTTCAGTGCGTGGTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 90 bp TGGGGGCGCAGGGGAAAGGCAGGGCTGGATGACTCACGGGACTCTTaGGTGCCCATCAACGCACACGCACACAGTCTAACACTTTGTTTT +
Preference number: 1 (lower is better)
Translates to: WGRRGKAGLDDSRDS*VPINAHAHSLTLCF
Trigger: AAAACAAAGTGTTAGACTGTGTGCGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTCCCCTGCGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp AGAAATGCACAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTaGTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGTGTGGCCTC +
Preference number: 1 (lower is better)
Translates to: RNAQGLFSSGEMSSH*SGDVGEQRGVRCGL
Trigger: GAGGCCACACCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTGTGCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTaGCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCC +
Preference number: 1 (lower is better)
Translates to: KTATRRPKGPLGDSL*QEQCGSRTHLSAHA
Trigger: GGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR GCA 90 bp AGCGCATGCCACACACACACACACATACACACATGCATGCACACATaGACTCACACTGTCACCCGTCCCAGCCATCTGTGCCACACACAT +
Preference number: 1 (lower is better)
Translates to: SACHTHTHIHTCMHT*THTVTRPSHLCHTH
Trigger: ATGTGTGTGGCACAGATGGCTGGGACGGGTGACAGTGTGAGTGCATGTGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR GCA 90 bp CATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATaGACACATGCACTCACACTGTCACCCGTCCCAGCCATCTGTGCC +
Preference number: 1 (lower is better)
Translates to: HLSAHATHTHTYTHA*THALTLSPVPAICA
Trigger: GGCACAGATGGCTGGGACGGGTGACAGTGTGAGTGCATGTGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR CCA 90 bp GTGGTTGGCACCAATACAGAGAGACAGGTGGGTAGCCCAGTGCCATaGGGTCAAGCAGTAAGTCATTTATTCTCACCCACGGAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: VVGTNTERQVGSPVP*GQAVSHLFSPTELA
Trigger: AGCCAGCTCCGTGGGTGAGAATAAATGACTTACTGCTTGACCCCATGGCACTGGGCTACCCACCTGTCTCTCTGTATTGGTGCCAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR TCA 90 bp ACTCAGCCTGGAGACCTGGCTGCCCGTGGTTCCTGCTGTCCTCTGTaGATTACAACCTGCCAGTTTGACTTTGGGGAGAAACAGTCACTT +
Preference number: 1 (lower is better)
Translates to: TQPGDLAARGSCCPL*ITTCQFDFGEKQSL
Trigger: AAGTGACTGTTTCTCCCCAAAGTCAAACTGGCAGGTTGTAATTCACAGAGGACAGCAGGAACCACGGGCAGCCAGGTCTCCAGGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATaGATGCACACATGCACTCACACTGTCACCCGTCCCAGCCATCTG +
Preference number: 1 (lower is better)
Translates to: DTFVSACHTHTHIHT*MHTCTHTVTRPSHL
Trigger: CAGATGGCTGGGACGGGTGACAGTGTGAGTGCATGTGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR CCA 90 bp CCTCCCTTCCAAGCTCCCAGGCCATGCTTCCTTCTCCATCACCCTTaGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTATTTTCTCTG +
Preference number: 1 (lower is better)
Translates to: PPFQAPRPCFLLHHP*TLSEWSLKAHLFSL
Trigger: CAGAGAAAATAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAAGCATGGCCTGGGAGCTTGGAAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 90 bp AGCTCCCAGGCCATGCTTCCTTCTCCATCACCCTTGGACCCTCTCTaGGTGGTCTCTCAAGGCACATTTATTTTCTCTGCTGCAACCTAC +
Preference number: 1 (lower is better)
Translates to: SSQAMLPSPSPLDPL*VVSQGTFIFSAATY
Trigger: GTAGGTTGCAGCAGAGAAAATAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAAGCATGGCCTGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATaGCACACACACACACACATACACACATGCATGCACACATGCACT +
Preference number: 1 (lower is better)
Translates to: TLPGAVWIKDTFVSA*HTHTHIHTCMHTCT
Trigger: AGTGCATGTGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR CCA 90 bp AAATCTAGTGCCTTTCTTCTGATGAGCATGAGAGGAAGGGGGAAGTaGTTGGCACCAATACAGAGAGACAGGTGGGTAGCCCAGTGCCAT +
Preference number: 1 (lower is better)
Translates to: KSSAFLLMSMRGRGK*LAPIQRDRWVAQCH
Trigger: ATGGCACTGGGCTACCCACCTGTCTCTCTGTATTGGTGCCAACCACTTCCCCCTTCCTCTCATGCTCATCAGAAGAAAGGCACTAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR TCA 90 bp CTTGCTCATGAGGAAACCTTAACCTTGTCTAACAAAAAGCCACTTTaGGGCCGCCCTTCAGCTCCACAGGGAGCTGCTGTTTTGTCTACC +
Preference number: 1 (lower is better)
Translates to: LAHEETLTLSNKKPL*GRPSAPQGAAVLST
Trigger: GGTAGACAAAACAGCAGCTCCCTGTGGAGCTGAAGGGCGGCCTCAAAGTGGCTTTTTGTTAGACAAGGTTAAGGTTTCCTCATGAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 90 bp GGGAGTTCCAGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATaGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTA +
Preference number: 1 (lower is better)
Translates to: GSSRTKQARNRSLNT*LSFFQHGPNSPTCL
Trigger: TAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCTGGAACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp CCCTTGGTCAAGGTCACAAATCAAGGAGCTGAGGAAGGACCGATCTaGAACCTTGCTCATGAGGAAACCTTAACCTTGTCTAACAAAAAG +
Preference number: 1 (lower is better)
Translates to: PLVKVTNQGAEEGPI*NLAHEETLTLSNKK
Trigger: CTTTTTGTTAGACAAGGTTAAGGTTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGACCTTGACCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 90 bp AAATCCAAGCACTTGAACACAATTCCTAACTCTAAGCTCAGTTATTaGACATCACACAGTTTAAGCAGGCTTCAGGCTGGAAAGCAGTTT +
Preference number: 1 (lower is better)
Translates to: KSKHLNTIPNSKLSY*TSHSLSRLQAGKQF
Trigger: AAACTGCTTTCCAGCCTGAAGCCTGCTTAAACTGTGTGATGTGCAATAACTGAGCTTAGAGTTAGGAATTGTGTTCAAGTGCTTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 90 bp GATACAATTTCAGCAGTTAAATCTACAGACGGAAATCCAAGCACTTaGACACAATTCCTAACTCTAAGCTCAGTTATTGCACATCACACA +
Preference number: 1 (lower is better)
Translates to: DTISAVKSTDGNPST*TQFLTLSSVIAHHT
Trigger: TGTGTGATGTGCAATAACTGAGCTTAGAGTTAGGAATTGTGTTCAAGTGCTTGGATTTCCGTCTGTAGATTTAACTGCTGAAATTGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GGAGGGAGGCCTAGGCCAGTGACACATGGATTCCGGATGGGCCGGCCTGCTGCCGCCTGGAGACCTGGCTaGCCGTGGTTCCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: GGRPRPVTHGFRMGRPAAAWRPG*PWFLLS
Trigger: GGACAGCAGGAACCACGGGCAGCCAGGTCTCCAGGC...GGCAGCAGGCCGGCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR CCA 90 bp CCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCAAGACCTGGCTGCCCGTaGTTCCTGCTGTCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: PRCCGRAAAQEAAGDCGSRPGCP*FLLSSV
Trigger: CACAGAGGACAGCAGGAACCACGGGCAGCCAGGTCT...TGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR GCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCAGGCTCCTTGCCTGCTaGTCCTGGCCCTCAGGCGCC +
Preference number: 2 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLRLLAC*SWPSGA
Trigger: GGCGCCTGAGGGCCAGGAGCAGCAGGCAAGGAGCCT...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACGGACAGGGCTTGCTGTaGCTGGGCGTCCTGGCCCGT +
Preference number: 2 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHGQGLL*LGVLAR
Trigger: ACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCC...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCTTGCCTGCTGCTCCTaGCCCTCAGGCGCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLLACCS*PSGALK
Trigger: CTTGAGGGCGCCTGAGGGCCAGGAGCAGCAGGCAAG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTGGGCTCGGGCTTTGGTaGAGCAGAGGGTCCCCGTGT +
Preference number: 2 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVGLGLW*SRGSPC
Trigger: ACACGGGGACCCTCTGCTTCACCAAAGCCCGAGCCC...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGAGGCTCCTTGCCTGCTaGTCCTGGCCCTCAGGCGCC +
Preference number: 2 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTRLLAC*SWPSGA
Trigger: GGCGCCTGAGGGCCAGGAGCAGCAGGCAAGGAGCCT...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CAA 90 bp TCTCATCTGAGGCTGGTGGGGATGTCACACCACATCGGCCCAGTTTaGGGAGGACCTCAGCTGGTAGACAGCTCCCTGCCCCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SHLRLVGMSHHIGPV*GGPQLVDSSLPLPP
Trigger: GGGAGGGAGGGGCAGGGAGCTGTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCACCAGCCTCAGATGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GCAAGAGCAGAAGTTTCAAGTAGCTCCGAGTCAGAGGCGCGGCTGCCTCAGAGAGGACAGGGCTTGCTGTaGCTGGGCGTCCTGGCCCGT +
Preference number: 2 (lower is better)
Translates to: ARAEVSSSSESEARLPQRGQGLL*LGVLAR
Trigger: ACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCC...TCTCTGAGGCAGCCGCGCCTCTGACTCGGAGCTACTTGAAACTTCTGCTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCAGAAGGGGCCTTTGGGTaGCTCACTCTGCCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPEGAFG*LTLPGA
Trigger: TGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTC...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTTTGGGTGACTCACTCTaGCAGGAGCAGTGTGGATCA +
Preference number: 2 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGLGDSL*QEQCGS
Trigger: TGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAA...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGGCCTCAGAGCCCGGCTaGACCTGTCCTGTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTASEPG*TCPVPS
Trigger: AGAGGGAACAGGACAGGTGCAGCCGGGCTCTGAGGC...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGGGCCGAAGGGGCCTTTaGGTGACTCACTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRGRRGL*VTHSAR
Trigger: CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTACTGGAGGGGCTGGGTaGCAGGCCCCTTGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFTGGAG*QAPWSR
Trigger: CCTTGACCAAGGGGCCTGCCACCCAGCCCCTCCAGT...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGCTGGCCCGTCTCATCTaGGGCTGGTGGGGATGTCAC +
Preference number: 2 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGLARLI*GWWGCH
Trigger: GTGACATCCCCACCAGCCTCAGATGAGACGGGCCAG...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp GCGGAGATCAGCAGCCCATCGCGGGGCCCGGCCACTCAGCCTGGAGACCTGGCTTGGCTGGATAGCCTATaGAGCATGTGTGTTTTAAAC +
Preference number: 2 (lower is better)
Translates to: AEISSPSRGPATQPGDLAWLDSL*SMCVLN
Trigger: GTTTAAAACACACATGCTTCATAGGCTATCCAGCCA...AGCCAGGTCTCCAGGCTGAGTGGCCGGGCCCCGCGATGGGCTGCTGATCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR TCA 90 bp AGGCTCCTGCGGCTGGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAGCAGCCTCCTGCTGTCCTCTGTaGATTACAACCTGCCAGTTT +
Preference number: 2 (lower is better)
Translates to: RLLRLDRSHVGRRRRSAASCCPL*ITTCQF
Trigger: AAACTGGCAGGTTGTAATTCACAGAGGACAGCAGGA...GGCTGCTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR GCA 90 bp TCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGATGGGCCGGCCTGCTaGCGCCCCCTCGCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: SFPSDLHWSHFGRSNSQRDGPAC*RPLAAV
Trigger: CACAGCAGCGAGGGGGCGGCAGCAGGCCGGCCCATC...TCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR CCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGCCCCAGCAAGGGGGATaGAGGCAGGAGTTGCACCAA +
Preference number: 2 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRPQQGG*RQELHQ
Trigger: TTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGGG...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAGGAACAGCATTTCCCTaGACTGAGCCGGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGGTAFP*TEPGLE
Trigger: CTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCC...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTCAGAGAGCAGAGGGCTaGTGTGGAACAGCATTTCCC +
Preference number: 2 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVQRAEG*CGTAFP
Trigger: GGGAAATGCTGTTCCACATCAGCCCTCTGCTCTCTG...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTGCTGGAGGACACGGCTaGGGGATCTCATTTCATGGA +
Preference number: 2 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVAGGHG*GISFHG
Trigger: TCCATGAAATGAGATCCCCCAGCCGTGTCCTCCAGC...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAGCAGCCCAGATCATaGCTCCACCACGAGACCCAG +
Preference number: 2 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGEQPRS*LHHETQ
Trigger: CTGGGTCTCGTGGTGGAGCCATGATCTGGGCTGCTC...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTTCAGGCGCCCTCAAGTaGATGAGGGGACCCCAGCAA +
Preference number: 2 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFSGALK*MRGPQQ
Trigger: TTGCTGGGGTCCCCTCATCCACTTGAGGGCGCCTGA...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGCAAGCTCCCAGGCCATaGTTCCTTCTCCATCACCCT +
Preference number: 2 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTQAPRP*FLLHHP
Trigger: AGGGTGATGGAGAAGGAAGCATGGCCTGGGAGCTTG...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGCGCTGGGCCTGCAGGTaGTTCGGGAAGGCCTCGCGG +
Preference number: 2 (lower is better)
Translates to: VSHLFSPTELAIGSRWKKRWACR*FGKASR
Trigger: CCGCGAGGCCTTCCCGAAGCACCTGCAGGCCCAGCG...CTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCCCAAGGGGTCAGGGCTaGGCTGGAGGACACGGCTGG +
Preference number: 2 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSPRGQG*AGGHGW
Trigger: CCAGCCGTGTCCTCCAGCCCAGCCCTGACCCCTTGG...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTTGGGTGGCTCTCCCCTaGCAGGAGGAAGATCATGGT +
Preference number: 2 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGWVALP*QEEDHG
Trigger: ACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCA...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACTTTGCTGAGGAGAACTaGATGGGTGGGGGAAAACAG +
Preference number: 2 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHFAEEN*MGGGKQ
Trigger: CTGTTTTCCCCCACCCATCCAGTTCTCCTCAGCAAA...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACATCCGTTCTCGAAGTTaGCTGCTGCTGCTCAGAGCT +
Preference number: 2 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDIRSRS*LLLLRA
Trigger: AGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGAT...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTCAGGGTCCTTCTGACTaGATTTCTGGATCCGTTCTC +
Preference number: 2 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCQGPSD*ISGSVL
Trigger: GAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGTTGGGTGACTCACTCTaGCAGGAGCAGTGTGGATCA +
Preference number: 2 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRLGDSL*QEQCGS
Trigger: TGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAA...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGACAAGCTCCCAGGCCATaGTTCCTTCTCCATCACCCT +
Preference number: 2 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGQAPRP*FLLHHP
Trigger: AGGGTGATGGAGAAGGAAGCATGGCCTGGGAGCTTG...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp TCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGACATCTGCGCTGGGCCTaGAGGTGCTTCGGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: SFPSDLHWSHFGRSNSQRHLRWA*RCFGKA
Trigger: GGCCTTCCCGAAGCACCTGCAGGCCCAGCGCAGATG...TCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR CCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAAGGGCTTGCTGTGGCTaGGCGTCCTGGCCCGTCTCA +
Preference number: 2 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLRACCG*ASWPVS
Trigger: TGAGACGGGCCAGGACGCCCAGCCACAGCAAGCCCT...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACGGAGAACTGGATGGGTaGGGGAAAACAGCAACAAAC +
Preference number: 2 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDGELDG*GKTATN
Trigger: GTTTGTTGCTGTTTTCCCCCACCCATCCAGTTCTCC...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCAGCATTTCCCTGAACTaGGCCGGGGCTGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSSISLN*AGAGVG
Trigger: CCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCT...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACGTCCCAGCCATCTGTaGCACACACATGCCATGCAC +
Preference number: 2 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTRPSHL*HTHAMH
Trigger: GTGCATGGCATGTGTGTGGCACAGATGGCTGGGACG...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACCGTCCCAGCCATCTGTaGCACACACATGCCATGCAC +
Preference number: 2 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHRPSHL*HTHAMH
Trigger: GTGCATGGCATGTGTGTGGCACAGATGGCTGGGACG...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTAGCTCCACAGGGAGCTaGTGTTTTGTCTACCTTTTG +
Preference number: 2 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVSSTGS*CFVYLL
Trigger: CAAAAGGTAGACAAAACAGCAGCTCCCTGTGGAGCT...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp ATTTCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCTGTGGCCGGGCTGCTaGCCAGGAAGCGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: ISFPSDLHWSHFGRSNSQLWPGC*PGSGRR
Trigger: TCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAG...CTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR CCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGCAGGAGGAAGATCATaGTCTCAGAGTGCGGAAAGG +
Preference number: 2 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGAGGRS*SQSAER
Trigger: CCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGC...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAGCTGGACATGGCCTGTaGGTGGCTCTCCCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: SQIKELRKDRSATLLMRKAGHGL*VALPWQ
Trigger: CTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTCTGAGGAGAACTGGATaGGTGGGGGAAAACAGCAAC +
Preference number: 2 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGLRRTG*VGENSN
Trigger: GTTGCTGTTTTCCCCCACCCATCCAGTTCTCCTCAG...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp ATTTCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCCAGGCTCCTGCGGCTaGACAGGTCGCATGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ISFPSDLHWSHFGRSNSQPGSCG*TGRMWG
Trigger: GCCCCACATGCGACCTGTCCAGCCGCAGGAGCCTGG...CTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CAA 90 bp TCTAGTGCCTTTCTTCTGATGAGCATGAGAGGAAGGGGGAAGTGGTaGGCACCAATACAGAGAGACAGGTGGGTAGCCCAGTGCCATGGG +
Preference number: 2 (lower is better)
Translates to: SSAFLLMSMRGRGKW*APIQRDRWVAQCHG
Trigger: CCCATGGCACTGGGCTACCCACCTGTCTCTCTGTATTGGTGCCAACCACTTCCCCCTTCCTCTCATGCTCATCAGAAGAAAGGCACTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR TCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAGATTCCAGGGCAGAGTaGGGGGCAGACAGGATGAGG +
Preference number: 2 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLDSRAE*GADRMR
Trigger: CCTCATCCTGTCTGCCCCTCACTCTGCCCTGGAATC...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTGAAGTTGGAAGCAGGTaGAGCTCATGGAAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGEVGSR*SSWKAE
Trigger: TTCAGCCTTCCATGAGCTTCACCTGCTTCCAACTTC...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACTCGAAGTTGCCTGCTaGTGCTCAGAGCTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: SARSSVDQGHICQRMPHTLEVAC*CSELCC
Trigger: ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAG...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGAGCTCCACAGGGAGCTaGTGTTTTGTCTACCTTTTG +
Preference number: 2 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTSSTGS*CFVYLL
Trigger: CAAAAGGTAGACAAAACAGCAGCTCCCTGTGGAGCT...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAGAGGAAGGACCGATCTaGAACCTTGCTCATGAGGAA +
Preference number: 2 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGEEGPI*NLAHEE
Trigger: TTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTC...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTAGCAGAGGGCTGATGTaGAACAGCATTTCCCTGAAC +
Preference number: 2 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFSRGLM*NSISLN
Trigger: GTTCAGGGAAATGCTGTTCCACATCAGCCCTCTGCT...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGCTCAGCCTGGAGACCTaGCTGCCCGTGGTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: VSHLFSPTELAIGSRWKKLSLET*LPVVPA
Trigger: AGCAGGAACCACGGGCAGCCAGGTCTCCAGGCTGAG...CTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR GCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACCGTCCCAGCCATCTGTaGCACACACATGCCATGCAC +
Preference number: 2 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHRPSHL*HTHAMH
Trigger: GTGCATGGCATGTGTGTGGCACAGATGGCTGGGACG...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTACACACGCACACACGCTaGACTCACCACGCACTGAAG +
Preference number: 2 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLHTHTR*THHALK
Trigger: CTTCAGTGCGTGGTGAGTGCAGCGTGTGTGCGTGTG...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTTCACAGCCCCAAGTCTaGGTAAGAAATTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFSQPQV*VRNSPP
Trigger: TGGTGGAGAATTTCTTACCCAGACTTGGGGCTGTGA...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTAACTGGGCTGCGGAATaGGAAGCAGTTTATGGAGTT +
Preference number: 2 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGNWAAE*EAVYGV
Trigger: AACTCCATAAACTGCTTCCCATTCCGCAGCCCAGTT...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGACTGGAGGGGCTGGGTaGCAGGCCCCTTGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQTGGAG*QAPWSR
Trigger: CCTTGACCAAGGGGCCTGCCACCCAGCCCCTCCAGT...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGTGGACAGGTCGCATGTaGGGCGAAGGCGGAGATCAG +
Preference number: 2 (lower is better)
Translates to: VSHLFSPTELAIGSRWKKWTGRM*GEGGDQ
Trigger: CTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCA...CTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CAA 90 bp TTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTaGTCAGCGCATGCCACACACACACACACATACACACATGCATGC +
Preference number: 2 (lower is better)
Translates to: LGDSLCQEQCGSRTH*SAHATHTHTYTHAC
Trigger: GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACCTCGAAGTTGCCTGCTaGTGCTCAGAGCTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHLEVAC*CSELCC
Trigger: ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAG...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATCTCGAAGTTGCCTGCTaGTGCTCAGAGCTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHLEVAC*CSELCC
Trigger: ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAG...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATGTTCTCGAAGTTGCCTaGTGCTGCTCAGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHVLEVA*CCSELC
Trigger: GCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAAC...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACAGGGTCCTTCTGACTaGATTTCTGGATCCGTTCTC +
Preference number: 2 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTQGPSD*ISGSVL
Trigger: GAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR GCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGCAAAGGGACAGGGCTTaGTGTGGCTGGGCGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQQRDRA*CGWASW
Trigger: CCAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTG...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCATCTAGGATTCAGAGCTaGCCCATCTCAACACCTAAA +
Preference number: 2 (lower is better)
Translates to: LAGGRSWSQSAERLQLSASRIQS*PISTPK
Trigger: TTTAGGTGTTGAGATGGGGCAGCTCTGAATCCTAGA...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGGCCTCAGAGCCCGGCTaGACCTGTCCTGTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQASEPG*TCPVPS
Trigger: AGAGGGAACAGGACAGGTGCAGCCGGGCTCTGAGGC...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CAA 90 bp GCAGCCAAGGGGAGTTCCAGGACCAAGCAAGCAAGAAACCGTTCTTaGAACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCT +
Preference number: 2 (lower is better)
Translates to: AAKGSSRTKQARNRS*NTWLSFFQHGPNSP
Trigger: AGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCTGGAACTCCCCTTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR TCA 90 bp TTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCGTACAACCTGCCAGTTTaGCTTTGGGGAGAAACAGTC +
Preference number: 2 (lower is better)
Translates to: FPLTFTGPILADQTASESYNLPV*LWGETV
Trigger: GACTGTTTCTCCCCAAAGTCAAACTGGCAGGTTGTA...CGACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR GCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCGAGATGAGCTCACACTaGTCAGGGGATGTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSEMSSH*SGDVGE
Trigger: TTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTC...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACGGGGATCTCATTTCATaGATTTTGACCTGTCAATTT +
Preference number: 2 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDGDLIS*ILTCQF
Trigger: AAATTGACAGGTCAAAATCCATGAAATGAGATCCCC...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR GCA 90 bp GCAAGAGCAGAAGTTTCAAGTAGCTCCGAGTCAGAGGCGCGGCTGCCTCAGAGAAACAAACAAAAGAAATaGACAGGGCCTCTTCTCATC +
Preference number: 2 (lower is better)
Translates to: ARAEVSSSSESEARLPQRNKQKK*TGPLLI
Trigger: GATGAGAAGAGGCCCTGTGCATTTCTTTTGTTTGTT...TCTCTGAGGCAGCCGCGCCTCTGACTCGGAGCTACTTGAAACTTCTGCTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCGTTTATGGAGTTAAGTaGGGCTCTGCTATTTCCCCC +
Preference number: 2 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSVYGVK*GSAISP
Trigger: GGGGGAAATAGCAGAGCCCCACTTAACTCCATAAAC...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CCA 90 bp GTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGTTCCCATCACTTGGCTaGATAGCCTATGAAGCATGT +
Preference number: 2 (lower is better)
Translates to: VSHLFSPTELAIGSRWKKFPSLG*IAYEAC
Trigger: ACATGCTTCATAGGCTATCCAGCCAAGTGATGGGAA...CTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CAA 90 bp AGTCTGGGTAAGAAATTCTCCACCAAAGGTGTTAAGGAATTTGCTTaGCTGAGGAGAACTGGATGGGTGGGGGAAAACAGCAACAAACAA +
Preference number: 2 (lower is better)
Translates to: SLGKKFSTKGVKEFA*LRRTGWVGENSNKQ
Trigger: TTGTTTGTTGCTGTTTTCCCCCACCCATCCAGTTCTCCTCAGCAAAGCAAATTCCTTAACACCTTTGGTGGAGAATTTCTTACCCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CAA 90 bp TGTGAATTACAACCTGCCAGTTTGACTTTGGGGAGAAACAGTCACTaGTCTGACGGTAACAAAAAGATCCAAATCTCTGCCTCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: CELQPASLTLGRNSH*SDGNKKIQISASSH
Trigger: ATGGGAAGAGGCAGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCCCAAAGTCAAACTGGCAGGTTGTAATTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 72 bp GATTCCGGATGGGCCGGCCTGCTGCCGCCCCCTCGCTaGTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGA +
Preference number: 3 (lower is better)
Translates to: DSGWAGLLPPPR*CGRAAAQEAAG
Trigger: TCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGGGCGGCAGCAGGCCGGCCCATCCGGAATC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CCA 72 bp CCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTaGGCCTGCAGGTGCTTCGGGAAGGCCTCGCGGGGC +
Preference number: 3 (lower is better)
Translates to: PRKRQETAAHLR*ACRCFGKASRG
Trigger: GCCCCGCGAGGCCTTCCCGAAGCACCTGCAGGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 72 bp TGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTaGGGCTCATCTGCGCTGGGCCTGCAGGTGCTTCGG +
Preference number: 3 (lower is better)
Translates to: CGRAAAQEAAGD*GSSALGLQVLR
Trigger: CCGAAGCACCTGCAGGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CCA 72 bp TCGGGAAGGCCTCGCGGGGCTCCAGGCTCCTGCGGCTaGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAG +
Preference number: 3 (lower is better)
Translates to: SGRPRGAPGSCG*TGRMWGEGGDQ
Trigger: CTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGCCTGGAGCCCCGCGAGGCCTTCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR TCA 72 bp GGCTTGCTGTGGCTGGGCGTCCTGGCCCGTCTCATCTaGGGCTGGTGGGGATGTCACACCACATCGGCCCAG +
Preference number: 3 (lower is better)
Translates to: GLLWLGVLARLI*GWWGCHTTSAQ
Trigger: CTGGGCCGATGTGGTGTGACATCCCCACCAGCCTCAGATGAGACGGGCCAGGACGCCCAGCCACAGCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 72 bp CAAACAGCCAGCGAGTCGGAGGGAGGCCTAGGCCAGTaGCACATGGATTCCGGATGGGCCGGCCTGCTGCCG +
Preference number: 3 (lower is better)
Translates to: QTASESEGGLGQ*HMDSGWAGLLP
Trigger: CGGCAGCAGGCCGGCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCCGACTCGCTGGCTGTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 72 bp TCTGGGTCTCCTTCTGTGGTGTCTCTCCCCTGGGACTaGCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: SGSPSVVSLPWD*RQPAASRRPQV
Trigger: TACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGGCAGTCCCAGGGGAGAGACACCACAGAAGGAGACCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp TTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTaGGCGTCCTGGCCCGTCTCATCTGAGGCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: LGIRQRDRACCG*ASWPVSSEAGG
Trigger: CCCACCAGCCTCAGATGAGACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp CGGCAAAGGGACAGGGCTTGCTGTGGCTGGGCGTCCTaGCCCGTCTCATCTGAGGCTGGTGGGGATGTCACA +
Preference number: 3 (lower is better)
Translates to: RQRDRACCGWAS*PVSSEAGGDVT
Trigger: TGTGACATCCCCACCAGCCTCAGATGAGACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp CTGGGAACTTCCTCGGGATGTCTGGGTCTCCTTCTGTaGTGTCTCTCCCCTGGGACTGCCGCCAGCCCGCAG +
Preference number: 3 (lower is better)
Translates to: LGTSSGCLGLLL*CLSPGTAASPQ
Trigger: CTGCGGGCTGGCGGCAGTCCCAGGGGAGAGACACCACAGAAGGAGACCCAGACATCCCGAGGAAGTTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp TCCTCACCCTGTTCTACCTGCACCACCTGGGCCACCTaGGACAGACCTCAGACAGCTTGGCGAGGCACCCTG +
Preference number: 3 (lower is better)
Translates to: SSPCSTCTTWAT*DRPQTAWRGTL
Trigger: CAGGGTGCCTCGCCAAGCTGTCTGAGGTCTGTCCCAGGTGGCCCAGGTGGTGCAGGTAGAACAGGGTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCACAGACCTCAGACAGCTaGGCGAGGCACCCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPQTSDS*ARHPVP
Trigger: AGGGACAGGGTGCCTCGCCAAGCTGTCTGAGGTCTG...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTCTAGACCCAGGCTCCTaGCCTGCTGCTCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFLDPGS*PAAPGP
Trigger: AGGGCCAGGAGCAGCAGGCAAGGAGCCTGGGTCTAG...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 72 bp GGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTaGAGCTCATGGAAGGCTGAAGGCAGGCGGGCTGGA +
Preference number: 3 (lower is better)
Translates to: GPHPLQSEVGSR*SSWKAEGRRAG
Trigger: TCCAGCCCGCCTGCCTTCAGCCTTCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp AGTGGGGCTGGACATGGCCTGTGGGTGGCTCTCCCCTaGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAA +
Preference number: 3 (lower is better)
Translates to: SGAGHGLWVALP*QEEDHGLRVRK
Trigger: TTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACGATCCGTTCTCGAAGTaGCCTGCTGCTGCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDDPFSK*PAAAQS
Trigger: GCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATC...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGAGGCCGAAGGGGCCTTaGGGTGACTCACTCTGCCAG +
Preference number: 3 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGRPKGP*GDSLCQ
Trigger: CTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCT...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp GCTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTaGTCTGGGCAGGACAGGAGTGTTAAGGGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: ASLRGLRDSSLC*SGQDRSVKGQG
Trigger: TCCCTGACCCTTAACACTCCTGTCCTGCCCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCACTCGCAGGCCAGAGCTaGACCTCAGAAGCAAGAGGG +
Preference number: 3 (lower is better)
Translates to: LAGGRSWSQSAERLQLSALAGQS*TSEARG
Trigger: CCCTCTTGCTTCTGAGGTCAAGCTCTGGCCTGCGAG...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 72 bp AGAGACAGAGAGAGCACGTGTCCCAGGAGCGGAGGGTaGCATCAAGAGGACAGGGGACACCCTTCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: RDRESTCPRSGG*HQEDRGHPSSE
Trigger: TTCAGAGGAAGGGTGTCCCCTGTCCTCTTGATGTCACCCTCCGCTCCTGGGACACGTGCTCTCTCTGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 72 bp CAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTaGAGCTTTCGGCAGCTGCTTCTCTCCGGGGTCTCA +
Preference number: 3 (lower is better)
Translates to: QEEDHGLRVRKG*SFRQLLLSGVS
Trigger: TGAGACCCCGGAGAGAAGCAGCTGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp GAAAGGCAGTGTGGGGGCTTCGGAAACAGGCAAGGCTaGACCCCTGCAATCCTACCAGAGGCTAGTTCAGTC +
Preference number: 3 (lower is better)
Translates to: ERQCGGFGNRQG*TPAILPEASSV
Trigger: GACTGAACTAGCCTCTGGTAGGATTGCAGGGGTCCAGCCTTGCCTGTTTCCGAAGCCCCCACACTGCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATGATCCGTTCTCGAAGTaGCCTGCTGCTGCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHDPFSK*PAAAQS
Trigger: GCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATC...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR-3UTR CAA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAGGATGGAGGCAGGAGTaGCACCAAGGGGGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLGWRQE*HQGGAR
Trigger: CCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCC...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTACTAGACCCAGGCTCCTaGCCTGCTGCTCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLLDPGS*PAAPGP
Trigger: AGGGCCAGGAGCAGCAGGCAAGGAGCCTGGGTCTAG...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 72 bp GAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTaGCTCACTCTGCCAGGAGCAGTGTGGATCAAGGAC +
Preference number: 3 (lower is better)
Translates to: ENSYKEAEGAFG*LTLPGAVWIKD
Trigger: GTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR TCA 72 bp AGGGGAAAGGCAGGGCTGGATGACTCACGGGACTCTTaGGTGCCCATCAACGCACACGCACACAGTCTAACA +
Preference number: 3 (lower is better)
Translates to: RGKAGLDDSRDS*VPINAHAHSLT
Trigger: TGTTAGACTGTGTGCGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 72 bp ACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTaGCAGGAGCAGTGTGGATCAAGGACACATTTGTCA +
Preference number: 3 (lower is better)
Translates to: TRRPKGPLGDSL*QEQCGSRTHLS
Trigger: TGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR GCA 72 bp CACACACACACACACATACACACATGCATGCACACATaGACTCACACTGTCACCCGTCCCAGCCATCTGTGC +
Preference number: 3 (lower is better)
Translates to: HTHTHIHTCMHT*THTVTRPSHLC
Trigger: GCACAGATGGCTGGGACGGGTGACAGTGTGAGTGCATGTGTGCATGCATGTGTGTATGTGTGTGTGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR CCA 72 bp CAAGCTCCCAGGCCATGCTTCCTTCTCCATCACCCTTaGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTA +
Preference number: 3 (lower is better)
Translates to: QAPRPCFLLHHP*TLSEWSLKAHL
Trigger: TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAAGCATGGCCTGGGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp GCCTTTCTTCTGATGAGCATGAGAGGAAGGGGGAAGTaGTTGGCACCAATACAGAGAGACAGGTGGGTAGCC +
Preference number: 3 (lower is better)
Translates to: AFLLMSMRGRGK*LAPIQRDRWVA
Trigger: GGCTACCCACCTGTCTCTCTGTATTGGTGCCAACCACTTCCCCCTTCCTCTCATGCTCATCAGAAGAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR-3UTR CAA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAGATCCGTTCTCGAAGTaGCCTGCTGCTGCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLDPFSK*PAAAQS
Trigger: GCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATC...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp TGGGCTGCGGAATGGGAAGCAGTTTATGGAGTTAAGTaGGGCTCTGCTATTTCCCCCAAGAAGGACTCGGAA +
Preference number: 3 (lower is better)
Translates to: WAAEWEAVYGVK*GSAISPKKDSE
Trigger: TTCCGAGTCCTTCTTGGGGGAAATAGCAGAGCCCCACTTAACTCCATAAACTGCTTCCCATTCCGCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp ACGCGACACCTCAACAATCAGAACTGGGCTGCGGAATaGGAAGCAGTTTATGGAGTTAAGTGGGGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: TRHLNNQNWAAE*EAVYGVKWGSA
Trigger: AGCAGAGCCCCACTTAACTCCATAAACTGCTTCCCATTCCGCAGCCCAGTTCTGATTGTTGAGGTGTCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 72 bp GAGGAAACCTTAACCTTGTCTAACAAAAAGCCACTTTaGGGCCGCCCTTCAGCTCCACAGGGAGCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: EETLTLSNKKPL*GRPSAPQGAAV
Trigger: AACAGCAGCTCCCTGTGGAGCTGAAGGGCGGCCTCAAAGTGGCTTTTTGTTAGACAAGGTTAAGGTTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR GCA 72 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATaGCACACACACACACACATACACACATGCATGCAC +
Preference number: 3 (lower is better)
Translates to: GAVWIKDTFVSA*HTHTHIHTCMH
Trigger: GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
3UTR CCA 72 bp ACCAATACAGAGAGACAGGTGGGTAGCCCAGTGCCATaGGGTCAAGCAGTAAGTCATTTATTCTCACCCACG +
Preference number: 3 (lower is better)
Translates to: TNTERQVGSPVP*GQAVSHLFSPT
Trigger: CGTGGGTGAGAATAAATGACTTACTGCTTGACCCCATGGCACTGGGCTACCCACCTGTCTCTCTGTATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CCA 72 bp TTATTGCACATCACACAGTTTAAGCAGGCTTCAGGCTaGAAAGCAGTTTGCTCTGCTGGGAACTTCCTCGGG +
Preference number: 3 (lower is better)
Translates to: LLHITQFKQASG*KAVCSAGNFLG
Trigger: CCCGAGGAAGTTCCCAGCAGAGCAAACTGCTTTCCAGCCTGAAGCCTGCTTAAACTGTGTGATGTGCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGTGGGTGGCAGGCCCCTaGGTCAAGGTCACAAATCAA +
Preference number: 3 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQWVAGP*VKVTNQ
Trigger: TTGATTTGTGACCTTGACCAAGGGGCCTGCCACCCA...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR-3UTR CAA 90 bp TCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGGGAGAAACAGTCACTaGTCTGACGGTAACAAAAAG +
Preference number: 3 (lower is better)
Translates to: SFPSDLHWSHFGRSNSQRGRNSH*SDGNKK
Trigger: CTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCC...TCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR GCA 72 bp AAGGTCACAAATCAAGGAGCTGAGGAAGGACCGATCTaGAACCTTGCTCATGAGGAAACCTTAACCTTGTCT +
Preference number: 3 (lower is better)
Translates to: KVTNQGAEEGPI*NLAHEETLTLS
Trigger: AGACAAGGTTAAGGTTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CCA 72 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATaGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCT +
Preference number: 3 (lower is better)
Translates to: RTKQARNRSLNT*LSFFQHGPNSP
Trigger: AGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR TCA 72 bp TCAGCAGTTAAATCTACAGACGGAAATCCAAGCACTTaGACACAATTCCTAACTCTAAGCTCAGTTATTGCA +
Preference number: 3 (lower is better)
Translates to: SAVKSTDGNPST*TQFLTLSSVIA
Trigger: TGCAATAACTGAGCTTAGAGTTAGGAATTGTGTTCAAGTGCTTGGATTTCCGTCTGTAGATTTAACTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCTTCCTCCCACCCCGCTaGTGGCGAAGCGCACGCGGC +
Preference number: 4 (lower is better)
Translates to: AGLLPRKRQETAAHLRWAFLPPR*WRSARG
Trigger: GCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAGGAA...GGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp CCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCAGCGGTCTGCCTCCGGTaGCTGGCGGAGAGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: PRCCGRAAAQEAAGDCGSAVCLR*LAESGS
Trigger: CGACCCACTCTCCGCCAGTCACCGGAGGCAGACCGC...TGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp CCCCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCTaGAGGTGCTTCGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PLAAVAGLLPRKRQETAAHLRWA*RCFGKA
Trigger: GGCCTTCCCGAAGCACCTGCAGGCCCAGCGCAGATG...AGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp CCCCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTTGGCCTGCGTTGTACTaGGTGGGTCGGACGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PLAAVAGLLPRKRQETAAWPALY*VGRTRE
Trigger: TTCCCTCGTCCGACCCACCCAGTACAACGCAGGCCA...AGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp CCCCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTTGGACAGGTCGCATGTaGGGCGAAGGCGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: PLAAVAGLLPRKRQETAAWTGRM*GEGGDQ
Trigger: CTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCA...AGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp AGGCTCCTGCGGCTGGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAGCAGCCCCAGGCTCCTGCGGCTaGACAGGTCGCATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLLRLDRSHVGRRRRSAAPGSCG*TGRMWG
Trigger: GCCCCACATGCGACCTGTCCAGCCGCAGGAGCCTGG...GGCTGCTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCGAGAATCAGAGAGGCTaGGCCAGCAGGGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: AGLLPRKRQETAAHLRWAENQRG*ASRGCN
Trigger: GTTACAGCCCCTGCTGGCGCAGCCTCTCTGATTCTC...GGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTGTCGTCAGCCTCGCCTaGCTCGCCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGVVSLA*LALLLL
Trigger: GAGGAGGAGGAGGGCGAGGCAGGCGAGGCTGACGAC...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCCCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTGAAAAAGCCCAGCACTaGACGCGGAGAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PLAAVAGLLPRKRQETAAEKAQH*TRRGRE
Trigger: CTCTCTCCCTCTCCGCGTCCAGTGCTGGGCTTTTTC...AGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp GCGGAGATCAGCAGCCCATCGCGGGGCCCGGCCACTCAGCCTGGAGACCTGGCTCTGCGTTGTACTGGGTaGGTCGGACGAGGGAACGTC +
Preference number: 4 (lower is better)
Translates to: AEISSPSRGPATQPGDLALRCTG*VGRGNV
Trigger: GACGTTCCCTCGTCCGACCCACCCAGTACAACGCAG...AGCCAGGTCTCCAGGCTGAGTGGCCGGGCCCCGCGATGGGCTGCTGATCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTCCGGCAGCCGGCTCCTaGGGGCGTCTACCAGATGTA +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGPAAGS*GRLPDV
Trigger: TACATCTGGTAGACGCCCTCAGGAGCCGGCTGCCGG...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGCCAGCGAGTCGGAGGGAGGCCTAGGCCAGTGACACATGGATTCCGGATGGGCCACATGGATTCCGGATaGGCCGGCCTGCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SQRVGGRPRPVTHGFRMGHMDSG*AGLLPP
Trigger: GGGCGGCAGCAGGCCGGCCCATCCGGAATCCATGTG...GCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCCGACTCGCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCGGGGCTCCCATGCGTaGGCGTGCCAGTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLRGSHA*ACQSAP
Trigger: TGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGCCAGCGAGTCGGAGGGAGGCCTAGGCCAGTGACACATGGATTCCGGATGGGCGAAGCGGCAGGAGACTaGGGCTCATCTGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQRVGGRPRPVTHGFRMGEAAGD*GSSALG
Trigger: GCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTC...GCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCCGACTCGCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTCCGGGGCGCGCATCGTaGTCTGGGTTCGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCPGRAS*SGFDLG
Trigger: CCCCAGGTCGAACCCAGACCACGATGCGCGCCCCGG...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GCTGCTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTGGTCTGGGCAGGACTCTTGTCCAGCCCGCTaGCCGGGCCGGCTACACTGC +
Preference number: 4 (lower is better)
Translates to: AASLRGLRDSSLCWSGQDSCPAR*PGRLHC
Trigger: GCAGTGTAGCCGGCCCGGCCAGCGGGCTGGACAAGA...GTCCTGCCCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGGTCTCGCCCTCCTTaGGCCCCTTGGCGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCGSRPP*APWRRL
Trigger: AAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCC...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTGATTCCAGGGCAGAGTaGGGGGCAGACAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGDSRAE*GADRMR
Trigger: CCTCATCCTGTCTGCCCCTCACTCTGCCCTGGAATC...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTTCACCCTGTTCTACCTaGACCACCTGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGSPCST*TTWATW
Trigger: CCAGGTGGCCCAGGTGGTGCAGGTAGAACAGGGTGA...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTACAGACGCTCACAGATaGTGGGAGGCTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGTDAHR*WEAGDC
Trigger: GCAGTCCCCAGCCTCCCAGCATCTGTGAGCGTCTGT...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACTCTGCCTCCGGTGACTaGCGGAGAGTGGGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDSASGD*RRVGRG
Trigger: GCCGCGACCCACTCTCCGCCAGTCACCGGAGGCAGA...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GCTGCTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTGGTCTGGGCAGGACGCGGCCTCCTGGATCTaGATGCGCTCCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AASLRGLRDSSLCWSGQDAASWI*MRSSSA
Trigger: GGCAGAGCTGGAGCGCATCCAGATCCAGGAGGCCGC...GTCCTGCCCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GCGGAGATCAGCAGCCCATCGCGGGGCCCGGCCACTCAGCCTGGAGACCTGGCTAAACGGGAGAGGTCATaGTGTGGCCTGCGTTGTACT +
Preference number: 4 (lower is better)
Translates to: AEISSPSRGPATQPGDLAKRERS*CGLRCT
Trigger: AGTACAACGCAGGCCACACCATGACCTCTCCCGTTT...AGCCAGGTCTCCAGGCTGAGTGGCCGGGCCCCGCGATGGGCTGCTGATCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp GGAGGGAGGCCTAGGCCAGTGACACATGGATTCCGGATGGGCCGGCCTGCTGCCAGAGTGGGTCGCGGCTaGAATGTGACCTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: GGRPRPVTHGFRMGRPAARVGRG*NVTWLG
Trigger: TCCTAACCAGGTCACATTTCAGCCGCGACCCACTCT...GGCAGCAGGCCGGCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCAGCGGTCTGCCTCCGGTaGCTGGCGGAGAGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: LAGGRSWSQSAERLQLSAAVCLR*LAESGS
Trigger: CGACCCACTCTCCGCCAGTCACCGGAGGCAGACCGC...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACCGGCAGCCGGCTCCTaGGGGCGTCTACCAGATGTA +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGPAAGS*GRLPDV
Trigger: TACATCTGGTAGACGCCCTCAGGAGCCGGCTGCCGG...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGTTCCTCCCACCCCGCTaGTGGCGAAGCGCACGCGGC +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGFLPPR*WRSARG
Trigger: GCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAGGAA...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGATCTTGCCGCTGTACTaGGAGATGGACGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: CCGRAAAQEAAGDCGSSAILPLY*EMDDSH
Trigger: ATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT...CGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCCGGGCCGGCTACACTaGTGGCTGAGCCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLPGRLH*WLSHSA
Trigger: AGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACTCCCATGCGTGCGCGTaGCAGTCAGCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDSHACA*QSAPGP
Trigger: TGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGA...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGTCTGCCTCCGGTGACTaGCGGAGAGTGGGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRSASGD*RRVGRG
Trigger: GCCGCGACCCACTCTCCGCCAGTCACCGGAGGCAGA...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGCCGGGGCGCGCATCGTaGTCTGGGTTCGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGPGRAS*SGFDLG
Trigger: CCCCAGGTCGAACCCAGACCACGATGCGCGCCCCGG...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTCATCGGCGGTGGAGGTaGCAGCCTGCTCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFHRRWR*QPAPWG
Trigger: GCCCCACGGAGCAGGCTGCCACCTCCACCGCCGATG...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAGCGGCCTCCTGGATCTaGATGCGCTCCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGAASWI*MRSSSA
Trigger: GGCAGAGCTGGAGCGCATCCAGATCCAGGAGGCCGC...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAGCGAGGTGTGAGGTGTaGCCTCAGAGCCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGARCEV*PQSPAA
Trigger: TGCAGCCGGGCTCTGAGGCCACACCTCACACCTCGC...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCTCCTGCGGCTGGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAGCAGCCCAGGAGATGCACTTGTCTaGAAAAGCCCAGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: APAAGQVACGAKAEISSPGDALV*KSPALD
Trigger: GTCCAGTGCTGGGCTTTTTCAGACAAGTGCATCTCC...TGGGCTGCTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTAGAGTGGGTCGCGGCTaGAATGTGACCTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGRVGRG*NVTWLG
Trigger: TCCTAACCAGGTCACATTTCAGCCGCGACCCACTCT...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGGTCTCGCCCTCCTTaGGCCCCTTGGCGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFGSRPP*APWRRL
Trigger: AAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCC...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGGGGTCTCGCCCTCCTTaGGCCCCTTGGCGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARGSRPP*APWRRL
Trigger: AAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCC...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACAGGTCAGCCAGGTCCTaGCCGGTGCAAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHRSARS*PVQVSG
Trigger: ACCAGAGACTTGCACCGGTCAGGACCTGGCTGACCT...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCTGCTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTGGTCTGGGCAGGACAGGTCAGCCAGGTCCTaGCCGGTGCAAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: AASLRGLRDSSLCWSGQDRSARS*PVQVSG
Trigger: ACCAGAGACTTGCACCGGTCAGGACCTGGCTGACCT...GTCCTGCCCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCGATTCCAGGGCAGAGTaGGGGGCAGACAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLDSRAE*GADRMR
Trigger: CCTCATCCTGTCTGCCCCTCACTCTGCCCTGGAATC...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTCCACCCCCTCCAAAGTaGAGTTGGAAGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGPPPPK*SWKQVK
Trigger: CTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGG...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATACAACCTGCCAGTTTaGCTTTGGGGAGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: PRCCGRAAAQEAAGDCGSYNLPV*LWGETV
Trigger: GACTGTTTCTCCCCAAAGTCAAACTGGCAGGTTGTA...TGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTTCCTCCCACCCCGCTaGTGGCGAAGCGCACGCGGC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCFLPPR*WRSARG
Trigger: GCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAGGAA...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GCGGAGATCAGCAGCCCATCGCGGGGCCCGGCCACTCAGCCTGGAGACCTGGCTATGGACGACAGCCATTaGTCGTCCTCCATGAAATTG +
Preference number: 4 (lower is better)
Translates to: AEISSPSRGPATQPGDLAMDDSH*SSSMKL
Trigger: CAATTTCATGGAGGACGAGCAATGGCTGTCGTCCAT...AGCCAGGTCTCCAGGCTGAGTGGCCGGGCCCCGCGATGGGCTGCTGATCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACCCTCCTGGATCTGGATaGGCTCCAGCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDPPGSG*APALPG
Trigger: GCCTGGCAGAGCTGGAGCGCATCCAGATCCAGGAGG...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTCAAGCTCCCAGGCCATaGTTCCTTCTCCATCACCCT +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGQAPRP*FLLHHP
Trigger: AGGGTGATGGAGAAGGAAGCATGGCCTGGGAGCTTG...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATCTCCCACCCCGCTGCTaGCGAAGCGCACGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHLPPRC*RSARGC
Trigger: ACAGCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAG...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CCCAGCAAGGGGGATGGAGGCAGGAGTTGCACCAAGGGGGAGCCAGGCAGAGGTTCTGGCAGGGGTCCTTaGTGGTATCCAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PSKGDGGRSCTKGEPGRGSGRGP*WYPGLH
Trigger: ATGAAGCCCTGGATACCACCAAGGACCCCTGCCAGA...ACCTCTGCCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACCATCGGCGGTGGAGGTaGCAGCCTGCTCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HSARSSVDQGHICQRMPHHRRWR*QPAPWG
Trigger: GCCCCACGGAGCAGGCTGCCACCTCCACCGCCGATG...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTGGCCGAAGGGGCCTTTaGGTGACTCACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVGRRGL*VTHSAR
Trigger: CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCCAAGGGGTCAGGGCTaGGCTGGAGGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: KTATRRPKGPLGDSLCQEPRGQG*AGGHGW
Trigger: CCAGCCGTGTCCTCCAGCCCAGCCCTGACCCCTTGG...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGGCTGGACATGGCCTGTaGGTGGCTCTCCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTAGHGL*VALPWQ
Trigger: CTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCAAAGTGGGGCTGGACATaGCCTGTGGGTGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPKWGWT*PVGGSP
Trigger: GGGAGAGCCACCCACAGGCCATGTCCAGCCCCACTT...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGGCGAGGTGTGAGGTGTaGCCTCAGAGCCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRARCEV*PQSPAA
Trigger: TGCAGCCGGGCTCTGAGGCCACACCTCACACCTCGC...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGGGACTGGGGGACCTaGAACGACGCGACACCTCAA +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCGDWGT*NDATPQ
Trigger: TTGAGGTGTCGCGTCGTTCCAGGTCCCCCAGTCCCC...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCAGAGCCGGGGCTGGAGTaGGGAGGTGAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPEPGLE*GGEGQR
Trigger: TCTCTGTCCTTCACCTCCCCACTCCAGCCCCGGCTC...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACACTGGAGGGGCTGGGTaGCAGGCCCCTTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDTGGAG*QAPWSR
Trigger: CCTTGACCAAGGGGCCTGCCACCCAGCCCCTCCAGT...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCCCTCGCTGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTTTCCCATCACTTGGCTaGATAGCCTATGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: PLAAVAGLLPRKRQETAAFPSLG*IAYEAC
Trigger: ACATGCTTCATAGGCTATCCAGCCAAGTGATGGGAA...AGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp GCTCCTGCGGCTGGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAGCAGCCCAGGTAGCCCAGTGCCATaGGGTCAAGCAGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: APAAGQVACGAKAEISSPGSPVP*GQAVSH
Trigger: ATGACTTACTGCTTGACCCCATGGCACTGGGCTACC...TGGGCTGCTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CAA 72 bp AGGCTGGTGGGGATGTCACACCACATCGGCCCAGTTTaGGGAGGACCTCAGCTGGTAGACAGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RLVGMSHHIGPV*GGPQLVDSSLP
Trigger: GGGCAGGGAGCTGTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCACCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACAGCGGTCTGCCTCCGGTaGCTGGCGGAGAGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTAVCLR*LAESGS
Trigger: CGACCCACTCTCCGCCAGTCACCGGAGGCAGACCGC...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAGCGGTCTGCCTCCGGTaGCTGGCGGAGAGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTAVCLR*LAESGS
Trigger: CGACCCACTCTCCGCCAGTCACCGGAGGCAGACCGC...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTCCAGCTTCTTGCGACTaGTGCACATGGCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCPASCD*CTWPAG
Trigger: ACCAGCGGGCCATGTGCATCAGTCGCAAGAAGCTGG...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAGAAGGGGCCTTTGGGTaGCTCACTCTGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGEGAFG*LTLPGA
Trigger: TGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTC...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCGCAACCTACCAGATCTaGCATCCACCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLATYQI*HPPPPA
Trigger: TGCTGGGGGAGGTGGATGTCAGATCTGGTAGGTTGC...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTAGAGGGTCCCCGTGTTaGTGCCAACGGACCCCACCC +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVARGSPC*CQRTPP
Trigger: GGGTGGGGTCCGTTGGCATCAACACGGGGACCCTCT...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAAGAGGGTCCCCGTGTTaGTGCCAACGGACCCCACCC +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGRGSPC*CQRTPP
Trigger: GGGTGGGGTCCGTTGGCATCAACACGGGGACCCTCT...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGTCCCATGCGTGCGCGTaGCAGTCAGCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGSHACA*QSAPGP
Trigger: TGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGA...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGTCGTCAGCCTCGCCTaGCTCGCCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCVVSLA*LALLLL
Trigger: GAGGAGGAGGAGGGCGAGGCAGGCGAGGCTGACGAC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTAGGCTCCTTGCCTGCTaGTCCTGGCCCTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIRLLAC*SWPSGA
Trigger: GGCGCCTGAGGGCCAGGAGCAGCAGGCAAGGAGCCT...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTGCAGCTTTCGGCAGCTaGTTCTCTCCGGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVAAFGS*FSPGSQ
Trigger: CTGAGACCCCGGAGAGAAGCAGCTGCCGAAAGCTGC...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACATCGGCGGTGGAGGTaGCAGCCTGCTCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTHRRWR*QPAPWG
Trigger: GCCCCACGGAGCAGGCTGCCACCTCCACCGCCGATG...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCAGTTTGCCATCGGCGGTaGAGGTGGCAGCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LAGGRSWSQSAERLQLSAVCHRR*RWQPAP
Trigger: CGGAGCAGGCTGCCACCTCCACCGCCGATGGCAAAC...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAGGCCGGCTACACTGCTaGCTGAGCCATTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGGRLHC*LSHSAW
Trigger: CCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCC...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTTTCTTGGCGGCCTCCTaGATCTGGATGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCFLAAS*IWMRSS
Trigger: GCTGGAGCGCATCCAGATCCAGGAGGCCGCCAAGAA...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGATTCTTGGCGGCCTCCTaGATCTGGATGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGFLAAS*IWMRSS
Trigger: GCTGGAGCGCATCCAGATCCAGGAGGCCGCCAAGAA...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCCCAAGGGGTCAGGGCTaGGCTGGAGGACACGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCPRGQG*AGGHGW
Trigger: CCAGCCGTGTCCTCCAGCCCAGCCCTGACCCCTTGG...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGTGTGGCTGGGCGTCCTaGCCCGTCTCATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRCGWAS*PVSSEA
Trigger: AGCCTCAGATGAGACGGGCCAGGACGCCCAGCCACA...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTAGGGCTTGCTGTGGCTaGGCGTCCTGGCCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVARACCG*ASWPVS
Trigger: TGAGACGGGCCAGGACGCCCAGCCACAGCAAGCCCT...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCACCCCAGCAAGGGGGATaGAGGCAGGAGTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPPQQGG*RQELHQ
Trigger: TTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGGG...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGGGGTCAGGGAGGAGGTaGGCACACACCCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARGSGRR*AHTPLA
Trigger: GGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCC...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACGGGGACTGGGGGACCTaGAACGACGCGACACCTCAA +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDGDWGT*NDATPQ
Trigger: TTGAGGTGTCGCGTCGTTCCAGGTCCCCCAGTCCCC...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCGCCCCCTCGCTGCTGTaGCCGGGCTGCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPSDLHWSHFGRSNSQRVAPSLL*PGCCPG
Trigger: TCCTGGGCAGCAGCCCGGCCACAGCAGCGAGGGGGC...GACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTCCGGCAGCCGGCTCCTaGGGGCGTCTACCAGATGTA +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIPAAGS*GRLPDV
Trigger: TACATCTGGTAGACGCCCTCAGGAGCCGGCTGCCGG...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGCTGGCCCGTCTCATCTaGGGCTGGTGGGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARLARLI*GWWGCH
Trigger: GTGACATCCCCACCAGCCTCAGATGAGACGGGCCAG...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTGGGAACAGCGAGGTGTaGGGTGTGGCCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIGNSEV*GVASEP
Trigger: GGGCTCTGAGGCCACACCTCACACCTCGCTGTTCCC...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGGGAACAGCGAGGTGTaGGGTGTGGCCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCGNSEV*GVASEP
Trigger: GGGCTCTGAGGCCACACCTCACACCTCGCTGTTCCC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTAGAGCCTCACTGCATTaGCCCCACACCCACCACTCA +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCRASLH*PHTHHS
Trigger: TGAGTGGTGGGTGTGGGGTCAATGCAGTGAGGCTCT...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCAGAGAGCAGAGGGCTaGTGTGGAACAGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLQRAEG*CGTAFP
Trigger: GGGAAATGCTGTTCCACATCAGCCCTCTGCTCTCTG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTCCCAGGAGCGGAGGGTaGCATCAAGAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVAPRSGG*HQEDRG
Trigger: TCCCCTGTCCTCTTGATGTCACCCTCCGCTCCTGGG...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGCCTTCGGCCAGGGCTaGCGCGGCCAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAAFGQG*RGQEQQ
Trigger: CTGCTGCTCCTGGCCGCGGCAGCCCTGGCCGAAGGC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGAGCCTTCGGCCAGGGCTaGCGCGGCCAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SHLFSPTELAIGSRWKKGAFGQG*RGQEQQ
Trigger: CTGCTGCTCCTGGCCGCGGCAGCCCTGGCCGAAGGC...TCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAACACCTTGTGGCGGCTaGACTTCACCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGTPCGG*TSPSGR
Trigger: CCTGCCAGAAGGTGAAGTGCAGCCGCCACAAGGTGT...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAGGTAGCCCTGGGCAATaGACACCTTGTGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGGSPGQ*TPCGGC
Trigger: GCAGCCGCCACAAGGTGTGCATTGCCCAGGGCTACC...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTCCGCCAGCTGCTTGCTaGTCAGGCACGCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGPPAAC*SGTPVA
Trigger: AGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGG...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCATCGCACCGCCAGCTaGTTGCTGCTCAGGCACGCC +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCHRTAS*LLLRHA
Trigger: GGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGATG...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATCATCGCACCGCCAGCTaGTTGCTGCTCAGGCACGCC +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHHRTAS*LLLRHA
Trigger: GGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGATG...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTCCGGGCCGGCTACACTaGTGGCTGAGCCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGPGRLH*WLSHSA
Trigger: AGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGG...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGAGCCAATGGAGTCCTTaGAGCTGGCCCCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRSQWSP*SWPPGS
Trigger: AGAGCCTGGGGGCCAGCTGCAAGGACTCCATTGGCT...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACGGGGCTCCCATGCGTaGGCGTGCCAGTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTRGSHA*ACQSAP
Trigger: TGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCG...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACCAGTCGGGGCTCCCATaGGTGCGCGTGCCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHQSGLP*VRVPVS
Trigger: GCTGACTGGCACGCGCACGCATGGGAGCCCCGACTG...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACAGTCGGGGCTCCCATaGGTGCGCGTGCCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTQSGLP*VRVPVS
Trigger: GCTGACTGGCACGCGCACGCATGGGAGCCCCGACTG...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACGTTCTCGAAGTTGCCTaGTGCTGCTCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHVLEVA*CCSELC
Trigger: GCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAAC...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGCAAAGGGACAGGGCTTaGTGTGGCTGGGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGQRDRA*CGWASW
Trigger: CCAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTG...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCAGGCTCCTTGCCTGCTaGTCCTGGCCCTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELRLLAC*SWPSGA
Trigger: GGCGCCTGAGGGCCAGGAGCAGCAGGCAAGGAGCCT...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACACGCACACACGCTaGACTCACCACGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGHTHTR*THHALK
Trigger: CTTCAGTGCGTGGTGAGTGCAGCGTGTGTGCGTGTG...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCCGCTGGGCCTGCAGGTaGTTCGGGAAGGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: FPSDLHWSHFGRSNSQRVRWACR*FGKASR
Trigger: CCGCGAGGCCTTCCCGAAGCACCTGCAGGCCCAGCG...GACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACTCTTGTCCAGCCCGCTaGCCGGGCCGGCTACACTGC +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHSCPAR*PGRLHC
Trigger: GCAGTGTAGCCGGCCCGGCCAGCGGGCTGGACAAGA...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGCGGCCAGCTCCGTCTaGTCCAGGAAGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFAASSV*SRKRSA
Trigger: TGCTGACCTCTTCCTGGACCAGACGGAGCTGGCCGC...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGATGCCTGGCTTCTTCTTaGCGGCCTCCTGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGCLASS*RPPGSG
Trigger: TCCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCA...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGGCCGAAGGGGCCTTTaGGTGACTCACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGGRRGL*VTHSAR
Trigger: CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCAGGGCTTGCTGTGGCTaGGCGTCCTGGCCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCRACCG*ASWPVS
Trigger: TGAGACGGGCCAGGACGCCCAGCCACAGCAAGCCCT...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAGGACAGGGCTTGCTGTaGCTGGGCGTCCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTGQGLL*LGVLAR
Trigger: ACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCC...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACGGACAGGGCTTGCTGTaGCTGGGCGTCCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHGQGLL*LGVLAR
Trigger: ACGGGCCAGGACGCCCAGCCACAGCAAGCCCTGTCC...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACTGGGTGGCTCTCCCCTaGCAGGAGGAAGATCATGGT +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDWVALP*QEEDHG
Trigger: ACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCA...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATACTGGAGGGGCTGGGTaGCAGGCCCCTTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHTGGAG*QAPWSR
Trigger: CCTTGACCAAGGGGCCTGCCACCCAGCCCCTCCAGT...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCTTCCTCGGGATGTCTaGGTCTCCTTCTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLLPRDV*VSFCGV
Trigger: GACACCACAGAAGGAGACCCAGACATCCCGAGGAAG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAAGAGTGGGTCGCGGCTaGAATGTGACCTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGRVGRG*NVTWLG
Trigger: TCCTAACCAGGTCACATTTCAGCCGCGACCCACTCT...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACATTGCTCGTCCTCCATaGAATTGCCGGGGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDIARPP*NCRGSR
Trigger: GCGAGACCCCCGGCAATTTCATGGAGGACGAGCAAT...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACTCGCAGGCCAGAGCTTaGCCTCAGAAGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDSQARA*PQKQEG
Trigger: TCCCTCTTGCTTCTGAGGTCAAGCTCTGGCCTGCGA...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTGCACTCACCACGCACTaGAGGGCATCACAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGALTTH*RASQPQ
Trigger: TTGGGGCTGTGATGCCCTTCAGTGCGTGGTGAGTGC...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCAGCATTTCCCTGAACTaGGCCGGGGCTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCSISLN*AGAGVG
Trigger: CCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCT...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAGCATTTCCCTGAACTaGGCCGGGGCTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HSARSSVDQGHICQRMPHSISLN*AGAGVG
Trigger: CCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCT...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACGACTCACGGGACTCTTaGGTGCCCATCAACGCACAC +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDDSRDS*VPINAH
Trigger: GTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTC...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCAAAAGGCAGGGCTGGATaGCTCACGGGACTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPKGRAG*LTGLLS
Trigger: ACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTT...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGGAGAATCAGAGAGGCTaGGCCAGCAGGGGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRENQRG*ASRGCN
Trigger: GTTACAGCCCCTGCTGGCGCAGCCTCTCTGATTCTC...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317376.8
CDS-3UTR GCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAGCCTTCGGCCAGGGCTaGCGCGGCCAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTAFGQG*RGQEQQ
Trigger: CTGCTGCTCCTGGCCGCGGCAGCCCTGGCCGAAGGC...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATGGTAGCCCTGGGCAATaGACACCTTGTGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHGSPGQ*TPCGGC
Trigger: GCAGCCGCCACAAGGTGTGCATTGCCCAGGGCTACC...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCGCACCGCCAGCTGCTTaGTGCTCAGGCACGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCAPPAA*CSGTPV
Trigger: AACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGC...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCCATCGCACCGCCAGCTaGTTGCTGCTCAGGCACGCC +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELHRTAS*LLLRHA
Trigger: GGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGATG...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCCGGGCCGGCTACACTaGTGGCTGAGCCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCPGRLH*WLSHSA
Trigger: AGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGG...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACCCTCCTGGATCTGGATaGGCTCCAGCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HSARSSVDQGHICQRMPHPPGSG*APALPG
Trigger: GCCTGGCAGAGCTGGAGCGCATCCAGATCCAGGAGG...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTACCAGCAGTCACCGCTaGTCTGGTCACACTGCATCT +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCTSSHR*SGHTAS
Trigger: AGATGCAGTGTGACCAGAGCAGCGGTGACTGCTGGT...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACATCCCATGCGTGCGCGTaGCAGTCAGCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTSHACA*QSAPGP
Trigger: TGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGA...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACATCCGTTCTCGAAGTTaGCTGCTGCTGCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHIRSRS*LLLLRA
Trigger: AGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGAT...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCGCCTCAGAGCCCGGCTaGACCTGTCCTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCASEPG*TCPVPS
Trigger: AGAGGGAACAGGACAGGTGCAGCCGGGCTCTGAGGC...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTCCCAGAGAGCCTCACTaGATTGACCCCACACCCACC +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGPREPH*IDPTPT
Trigger: GGTGGGTGTGGGGTCAATGCAGTGAGGCTCTCTGGG...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAGGGAGGCCTAGGCCAGTGACACATGGATTCCGGATGGGCCGGCCTGCTGCCAAAGATCCAAATCTCTaGCTCTTCCCATCACTTGGC +
Preference number: 4 (lower is better)
Translates to: GGRPRPVTHGFRMGRPAAKDPNL*LFPSLG
Trigger: GCCAAGTGATGGGAAGAGGCAGAGATTTGGATCTTT...GGCAGCAGGCCGGCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp TTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCCTGTGGCCGGGCTGCTaGCCAGGAAGCGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FPSDLHWSHFGRSNSQRVLWPGC*PGSGRR
Trigger: TCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAG...GACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACGAAAAAGCCCAGCACTaGACGCGGAGAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDEKAQH*TRRGRE
Trigger: CTCTCTCCCTCTCCGCGTCCAGTGCTGGGCTTTTTC...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCCTCCCACCCCGCTGCTaGCGAAGCGCACGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACLPPRC*RSARGC
Trigger: ACAGCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAG...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATCCGGGGCGCGCATCGTaGTCTGGGTTCGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHPGRAS*SGFDLG
Trigger: CCCCAGGTCGAACCCAGACCACGATGCGCGCCCCGG...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGGCAAGCTGGGCCATGTaGCAGGGCTTGCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: KTATRRPKGPLGDSLCQEASWAM*QGLQME
Trigger: CTCCATCTGCAAGCCCTGCCACATGGCCCAGCTTGC...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCGTTTGCCATCGGCGGTaGAGGTGGCAGCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELVCHRR*RWQPAP
Trigger: CGGAGCAGGCTGCCACCTCCACCGCCGATGGCAAAC...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACAGTTTGCCATCGGCGGTaGAGGTGGCAGCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTVCHRR*RWQPAP
Trigger: CGGAGCAGGCTGCCACCTCCACCGCCGATGGCAAAC...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACACCGGTGCAAGTCTCTaGTTTGCCATCGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDTGASL*FAIGGG
Trigger: TCCACCGCCGATGGCAAACCAGAGACTTGCACCGGT...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCATGGAGTCCTTGCAGCTaGCCCCCAGGCTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LAGGRSWSQSAERLQLSAWSPCS*PPGSCP
Trigger: TGGACAAGAGCCTGGGGGCCAGCTGCAAGGACTCCA...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCACTGGTGTCCAGCTTaGAGAACATCCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLHWCPA*RTSSQW
Trigger: CCATTGGCTGGATGTTCTCCAAGCTGGACACCAGTG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAAGCTCCAGGCCCAGCTaGTCCACACACCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGSSRPS*STHQQS
Trigger: TGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCT...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGACCTCAGACAGCTTaGCGAGGCACCCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARRPQTA*RGTLSL
Trigger: CAGGGACAGGGTGCCTCGCCAAGCTGTCTGAGGTCT...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTACCACCTGGGCCACCTaGGACAGACCTCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGTTWAT*DRPQTA
Trigger: AGCTGTCTGAGGTCTGTCCCAGGTGGCCCAGGTGGT...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCATCAGGCGCCCTCAAGTaGATGAGGGGACCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LAGGRSWSQSAERLQLSASGALK*MRGPQQ
Trigger: TTGCTGGGGTCCCCTCATCCACTTGAGGGCGCCTGA...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTGGGTCAGGGAGGAGGTaGGCACACACCCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCGSGRR*AHTPLA
Trigger: GGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCC...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GCTGCTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTGGTCTGGGCAGGACGCAGGAGGAAGATCATaGTCTCAGAGTGCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AASLRGLRDSSLCWSGQDAGGRS*SQSAER
Trigger: CCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGC...GTCCTGCCCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTAAGTGGGGCTGGACATaGCCTGTGGGTGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIKWGWT*PVGGSP
Trigger: GGGAGAGCCACCCACAGGCCATGTCCAGCCCCACTT...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCCCCAGGCCACCAGGATaGCCCCCAGGTTCACACACA +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCPRPPG*PPGSHT
Trigger: TGTGTGTGAACCTGGGGGCCATCCTGGTGGCCTGGG...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTGGGGACTGCCAGGTTaGGAGCCTCACCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCWGLPG*EPHPES
Trigger: GCTCTCTGGGTGAGGCTCCCAACCTGGCAGTCCCCA...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGAACTGAGCCGGGGCTaGAGTGGGGAGGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCELSRG*SGEVKD
Trigger: GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAGGGCGAAAGGCAGTGTaGGGGCTTCGGAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGGRKAV*GLRKQA
Trigger: TGCCTGTTTCCGAAGCCCCCACACTGCCTTTCGCCC...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGCCAGCGAGTCGGAGGGAGGCCTAGGCCAGTGACACATGGATTCCGGATGGGCAGAGGAAGGGGGAAGTaGTTGGCACCAATACAGAGA +
Preference number: 4 (lower is better)
Translates to: SQRVGGRPRPVTHGFRMGRGRGK*LAPIQR
Trigger: TCTCTGTATTGGTGCCAACCACTTCCCCCTTCCTCT...GCCCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCCCTCCGACTCGCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTATTGCTCGTCCTCCATaGAATTGCCGGGGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVAIARPP*NCRGSR
Trigger: GCGAGACCCCCGGCAATTTCATGGAGGACGAGCAAT...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCAAGAGCAGAAGTTTCAAGTAGCTCCGAGTCAGAGGCGCGGCTGCCTCAGAGATCACGGTCGGCTGCTTaGTCCTGTGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ARAEVSSSSESEARLPQRSRSAA*SCAPAS
Trigger: AGAAGCTGGAGCACAGGATCAAGCAGCCGACCGTGA...TCTCTGAGGCAGCCGCGCCTCTGACTCGGAGCTACTTGAAACTTCTGCTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTCGTCGCAGCTCGGGATaGAGATGCCTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVARRSSG*RCLASS
Trigger: AGAAGAAGCCAGGCATCTTCATCCCGAGCTGCGACG...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTCAGACAGGGGTCGGTTaGGCCAGGGTAGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFQTGVG*ARVETK
Trigger: CTTGGTTTCTACCCTGGCTCAACCGACCCCTGTCTG...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACCTCTTCTCATCTGGTaGGATGAGCTCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGPLLIW*DELTLL
Trigger: GAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGG...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCACAAATCAAGGAGCTaGGGAAGGACCGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLHKSRS*GRTDLQ
Trigger: TTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTGCAACCTACCAGATCTaGCATCCACCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGATYQI*HPPPPA
Trigger: TGCTGGGGGAGGTGGATGTCAGATCTGGTAGGTTGC...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATTCCTCCCACCCCGCTaGTGGCGAAGCGCACGCGGC +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTFLPPR*WRSARG
Trigger: GCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAGGAA...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAACAGCGAGGTGTGAGGCGGAAGCGGTTCCAGTaGTTGATCTTGCCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GEMSSHCSGDVGEQRGVRRKRFQ*LILPLY
Trigger: GTACAGCGGCAAGATCAAGCACTGGAACCGCTTCCG...CCTCACACCTCGCTGTTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACGGTAGCCCTGGGCAATaGACACCTTGTGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHGSPGQ*TPCGGC
Trigger: GCAGCCGCCACAAGGTGTGCATTGCCCAGGGCTACC...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGCTCAGGCACGCCTGTTaGTCCAGCTTACACACAGAG +
Preference number: 4 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTLRHAC*SSLHTE
Trigger: CTCTGTGTGTAAGCTGGAGCAACAGGCGTGCCTGAG...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACCGCCAGCTGCTTGCTaGTCAGGCACGCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTPPAAC*SGTPVA
Trigger: AGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGG...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCCCGCCAGCTGCTTGCTaGTCAGGCACGCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELPPAAC*SGTPVA
Trigger: AGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGG...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCAGCCAATGGAGTCCTTaGAGCTGGCCCCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCSQWSP*SWPPGS
Trigger: AGAGCCTGGGGGCCAGCTGCAAGGACTCCATTGGCT...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCCGGGGCTCCCATGCGTaGGCGTGCCAGTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACRGSHA*ACQSAP
Trigger: TGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCG...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACGTCGTCAGCCTCGCCTaGCTCGCCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHVVSLA*LALLLL
Trigger: GAGGAGGAGGAGGGCGAGGCAGGCGAGGCTGACGAC...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTATCCGTTCTCGAAGTTaGCTGCTGCTGCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVIRSRS*LLLLRA
Trigger: AGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGAT...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGCAGCTTTCGGCAGCTaGTTCTCTCCGGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCAAFGS*FSPGSQ
Trigger: CTGAGACCCCGGAGAGAAGCAGCTGCCGAAAGCTGC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTGCCTCAGAGCCCGGCTaGACCTGTCCTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAASEPG*TCPVPS
Trigger: AGAGGGAACAGGACAGGTGCAGCCGGGCTCTGAGGC...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GCTGCTTCTCTCCGGGGTCTCAGGGACAGCTCTCTCTGTTGGTCTGGGCAGGACGAGGAAGGACCGATCTaGAACCTTGCTCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: AASLRGLRDSSLCWSGQDEEGPI*NLAHEE
Trigger: TTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTC...GTCCTGCCCAGACCAACAGAGAGAGCTGTCCCTGAGACCCCGGAGAGAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGCCTAATTCCCCTACCTaGCTAAGCCAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARPNSPT*LSQGSG
Trigger: CCCACTCCCCTGGCTTAGGCAGGTAGGGGAATTAGG...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACGGCTGGAAAGCAGTTTaGTCTGCTGGGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDGWKAV*SAGNFL
Trigger: GAGGAAGTTCCCAGCAGAGCAAACTGCTTTCCAGCC...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGGAAAAAGCCCAGCACTaGACGCGGAGAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGEKAQH*TRRGRE
Trigger: CTCTCTCCCTCTCCGCGTCCAGTGCTGGGCTTTTTC...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGCTCCCACCCCGCTGCTaGCGAAGCGCACGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: VSHLFSPTELAIGSRWKKLPPRC*RSARGC
Trigger: ACAGCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAG...CTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACACTCCCACCCCGCTGCTaGCGAAGCGCACGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTLPPRC*RSARGC
Trigger: ACAGCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAG...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGTCTGGCAGGGGTCCTTaGTGGTATCCAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTSGRGP*WYPGLH
Trigger: ATGAAGCCCTGGATACCACCAAGGACCCCTGCCAGA...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCGGCCGGCTACACTGCTaGCTGAGCCATTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCGRLHC*LSHSAW
Trigger: CCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCC...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCATCTTGTCCAGCCCGCTaGCCGGGCCGGCTACACTGC +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHASCPAR*PGRLHC
Trigger: GCAGTGTAGCCGGCCCGGCCAGCGGGCTGGACAAGA...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGGAGTCCTTGCAGCTaGCCCCCAGGCTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCWSPCS*PPGSCP
Trigger: TGGACAAGAGCCTGGGGGCCAGCTGCAAGGACTCCA...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACGCGGCCAGCTCCGTCTaGTCCAGGAAGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHAASSV*SRKRSA
Trigger: TGCTGACCTCTTCCTGGACCAGACGGAGCTGGCCGC...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTTGCCTGGCTTCTTCTTaGCGGCCTCCTGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVACLASS*RPPGSG
Trigger: TCCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCA...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGTGCCTGGCTTCTTCTTaGCGGCCTCCTGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARCLASS*RPPGSG
Trigger: TCCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCA...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGCGGGATGAAGATGCCTaGCTTCTTCTTGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARRDEDA*LLLGGL
Trigger: GAGGCCGCCAAGAAGAAGCCAGGCATCTTCATCCCG...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGCAGTCACCGCTGCTCTaGTCACACTGCATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARQSPLL*SHCIFR
Trigger: CCGGAAGATGCAGTGTGACCAGAGCAGCGGTGACTG...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCAGCTCCAGGCCCAGCTaGTCCACACACCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCSSRPS*STHQQS
Trigger: TGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCT...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTGGCCGAAGGGGCCTTTaGGTGACTCACTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCGRRGL*VTHSAR
Trigger: CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACATGTGGCTGGGCGTCCTaGCCCGTCTCATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTCGWAS*PVSSEA
Trigger: AGCCTCAGATGAGACGGGCCAGGACGCCCAGCCACA...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTAGACCTCAGACAGCTTaGCGAGGCACCCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIRPQTA*RGTLSL
Trigger: CAGGGACAGGGTGCCTCGCCAAGCTGTCTGAGGTCT...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGAGCAGCCCAGATCATaGCTCCACCACGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCEQPRS*LHHETQ
Trigger: CTGGGTCTCGTGGTGGAGCCATGATCTGGGCTGCTC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCGGAGAACTGGATGGGTaGGGGAAAACAGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLGELDG*GKTATN
Trigger: GTTTGTTGCTGTTTTCCCCCACCCATCCAGTTCTCC...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACCTGAGGAGAACTGGATaGGTGGGGGAAAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDLRRTG*VGENSN
Trigger: GTTGCTGTTTTCCCCCACCCATCCAGTTCTCCTCAG...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACATGGGGACTGCCAGGTTaGGAGCCTCACCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTWGLPG*EPHPES
Trigger: GCTCTCTGGGTGAGGCTCCCAACCTGGCAGTCCCCA...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAGAGCCGGGGCTGGAGTaGGGAGGTGAAGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTEPGLE*GGEGQR
Trigger: TCTCTGTCCTTCACCTCCCCACTCCAGCCCCGGCTC...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTAGCAGTTTGCTCTGCTaGGAACTTCCTCGGGATGTC +
Preference number: 4 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVSSLLC*ELPRDV
Trigger: GACATCCCGAGGAAGTTCCCAGCAGAGCAAACTGCT...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTAGAGTGGGTCGCGGCTaGAATGTGACCTGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVARVGRG*NVTWLG
Trigger: TCCTAACCAGGTCACATTTCAGCCGCGACCCACTCT...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCCCAGCTTCTTGCGACTaGTGCACATGGCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELPASCD*CTWPAG
Trigger: ACCAGCGGGCCATGTGCATCAGTCGCAAGAAGCTGG...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCTCACGGTCGGCTGCTTaGTCCTGTGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCSRSAA*SCAPAS
Trigger: AGAAGCTGGAGCACAGGATCAAGCAGCCGACCGTGA...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACAAGGTCAGCCAGGTCCTaGCCGGTGCAAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTRSARS*PVQVSG
Trigger: ACCAGAGACTTGCACCGGTCAGGACCTGGCTGACCT...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTCGTACTTGTCCAGGTTaGTGGCGGCCAGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCRTCPG*WRPAPS
Trigger: AGACGGAGCTGGCCGCCATCAACCTGGACAAGTACG...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACGTACTTGTCCAGGTTaGTGGCGGCCAGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTRTCPG*WRPAPS
Trigger: AGACGGAGCTGGCCGCCATCAACCTGGACAAGTACG...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCGAAGGGGCCTTTGGGTaGCTCACTCTGCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELEGAFG*LTLPGA
Trigger: TGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTC...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAGGACTCGGAAGATGTTaGTTCCAGGGCAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGGLGRC*FQGRVR
Trigger: CCTCACTCTGCCCTGGAATCAACATCTTCCGAGTCC...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCGGAACAGCATTTCCCTaGACTGAGCCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELGTAFP*TEPGLE
Trigger: CTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCC...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCACAGAGAGCAGAGGGCTaGTGTGGAACAGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LAGGRSWSQSAERLQLSAQRAEG*CGTAFP
Trigger: GGGAAATGCTGTTCCACATCAGCCCTCTGCTCTCTG...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACGGGCTCGGGCTTTGGTaGAGCAGAGGGTCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHGLGLW*SRGSPC
Trigger: ACACGGGGACCCTCTGCTTCACCAAAGCCCGAGCCC...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGGCCTTCGGCCAGGGCTaGCGCGGCCAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQAFGQG*RGQEQQ
Trigger: CTGCTGCTCCTGGCCGCGGCAGCCCTGGCCGAAGGC...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTGGCTGCTTGATCCTGTaGTCCAGCTTCTTGCGACTG +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGGCLIL*SSFLRL
Trigger: CAGTCGCAAGAAGCTGGAGCACAGGATCAAGCAGCC...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGAGTTTCACGGTCGGCTaGTTGATCCTGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGSFTVG*LILCSS
Trigger: GCTGGAGCACAGGATCAAGCAGCCGACCGTGAAACT...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGCTCAGGCACGCCTGTTaGTCCAGCTTACACACAGAG +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGLRHAC*SSLHTE
Trigger: CTCTGTGTGTAAGCTGGAGCAACAGGCGTGCCTGAG...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCAAGTCTCTGGTTTaGCATCGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCCKSLV*HRRWRW
Trigger: CCACCTCCACCGCCGATGGCAAACCAGAGACTTGCA...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACACAGTCGGGGCTCCCATaGGTGCGCGTGCCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTQSGLP*VRVPVS
Trigger: GCTGACTGGCACGCGCACGCATGGGAGCCCCGACTG...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGCTCGAAGTTGCCTGCTaGTGCTCAGAGCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGLEVAC*CSELCC
Trigger: ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAG...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATCGTCCCAGCCATCTGTaGCACACACATGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHRPSHL*HTHAMH
Trigger: GTGCATGGCATGTGTGTGGCACAGATGGCTGGGACG...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACACAGACGCTCACAGATaGTGGGAGGCTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHTDAHR*WEAGDC
Trigger: GCAGTCCCCAGCCTCCCAGCATCTGTGAGCGTCTGT...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAAAGGACACACAAACGTaGACAGCCAGAAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGKDTQT*TARRPR
Trigger: TCTGGGTCTTCTGGCTGTGCACGTTTGTGTGTCCTT...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACGAGGAAGGACCGATCTaGAACCTTGCTCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDEEGPI*NLAHEE
Trigger: TTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTC...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTCAAGCTCCCAGGCCATaGTTCCTTCTCCATCACCCT +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGQAPRP*FLLHHP
Trigger: AGGGTGATGGAGAAGGAAGCATGGCCTGGGAGCTTG...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCAGAAAGCAGTTTGCTCTaGTGGGAACTTCCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPESSLL*WELPRD
Trigger: ATCCCGAGGAAGTTCCCAGCAGAGCAAACTGCTTTC...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp ATTTCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCCGGGGCGCGCATCGTaGTCTGGGTTCGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: ISFPSDLHWSHFGRSNSQPGRAS*SGFDLG
Trigger: CCCCAGGTCGAACCCAGACCACGATGCGCGCCCCGG...CTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCGCTGTACTGCGAGATaGACGACAGCCATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: KTATRRPKGPLGDSLCQERCTAR*TTAIAR
Trigger: ACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCG...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGGCAATGCACACCTTGTaGCGGCTGCACTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KTATRRPKGPLGDSLCQEAMHTL*RLHFTF
Trigger: GAAGGTGAAGTGCAGCCGCCACAAGGTGTGCATTGC...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGGCAAGCTGGGCCATGTaGCAGGGCTTGCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSEASWAM*QGLQME
Trigger: CTCCATCTGCAAGCCCTGCCACATGGCCCAGCTTGC...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACAGCAAGCTGGGCCATGTaGCAGGGCTTGCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTASWAM*QGLQME
Trigger: CTCCATCTGCAAGCCCTGCCACATGGCCCAGCTTGC...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCACCGGTGCAAGTCTCTaGTTTGCCATCGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCTGASL*FAIGGG
Trigger: TCCACCGCCGATGGCAAACCAGAGACTTGCACCGGT...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTGGCCGGCTACACTGCTaGCTGAGCCATTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAGRLHC*LSHSAW
Trigger: CCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCC...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGTGGAGTCCTTGCAGCTaGCCCCCAGGCTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSEWSPCS*PPGSCP
Trigger: TGGACAAGAGCCTGGGGGCCAGCTGCAAGGACTCCA...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATGCGGCCTCCTGGATCTaGATGCGCTCCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHAASWI*MRSSSA
Trigger: GGCAGAGCTGGAGCGCATCCAGATCCAGGAGGCCGC...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTTTCTTGGCGGCCTCCTaGATCTGGATGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCFLAAS*IWMRSS
Trigger: GCTGGAGCGCATCCAGATCCAGGAGGCCGCCAAGAA...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACCAGTCACCGCTGCTCTaGTCACACTGCATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: HSARSSVDQGHICQRMPHQSPLL*SHCIFR
Trigger: CCGGAAGATGCAGTGTGACCAGAGCAGCGGTGACTG...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGACCACCTGGGCCACCTaGGACAGACCTCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSETTWAT*DRPQTA
Trigger: AGCTGTCTGAGGTCTGTCCCAGGTGGCCCAGGTGGT...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACCCCAGCAAGGGGGATaGAGGCAGGAGTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTPQQGG*RQELHQ
Trigger: TTGGTGCAACTCCTGCCTCCATCCCCCTTGCTGGGG...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCCTTGCCTGCTGCTCCTaGCCCTCAGGCGCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACLACCS*PSGALK
Trigger: CTTGAGGGCGCCTGAGGGCCAGGAGCAGCAGGCAAG...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTGACAGCTCTCTCTGTTaGTCTGGGCAGGACAGGAGT +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVADSSLC*SGQDRS
Trigger: ACTCCTGTCCTGCCCAGACCAACAGAGAGAGCTGTC...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATGCTGGACATGGCCTGTaGGTGGCTCTCCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHAGHGL*VALPWQ
Trigger: CTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTCTCAACAATCAGAACTaGGCTGCGGAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVLNNQN*AAEWEA
Trigger: TGCTTCCCATTCCGCAGCCCAGTTCTGATTGTTGAG...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGGGGCGAAAGGCAGTGTaGGGGCTTCGGAAACAGGCA +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSEGRKAV*GLRKQA
Trigger: TGCCTGTTTCCGAAGCCCCCACACTGCCTTTCGCCC...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTCTTCCTCGGGATGTCTaGGTCTCCTTCTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVALPRDV*VSFCGV
Trigger: GACACCACAGAAGGAGACCCAGACATCCCGAGGAAG...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCAGGAGATGCACTTGTCTaGAAAAGCCCAGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LAGGRSWSQSAERLQLSAGDALV*KSPALD
Trigger: GTCCAGTGCTGGGCTTTTTCAGACAAGTGCATCTCC...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AGTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGTCTCGCCCTCCTTaGGCCCCTTGGCGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: SKSFILTHGAGYWKQVEEGSRPP*APWRRL
Trigger: AAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCC...TTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTATTGCTCGTCCTCCATaGAATTGCCGGGGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCIARPP*NCRGSR
Trigger: GCGAGACCCCCGGCAATTTCATGGAGGACGAGCAAT...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACAAGCGGTTCCAGTGCTTaGTCTTGCCGCTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTSGSSA*SCRCTA
Trigger: CGCAGTACAGCGGCAAGATCAAGCACTGGAACCGCT...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp TTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCGAGCGGTTCCAGTGCTTaGTCTTGCCGCTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: FPLTFTGPILADQTASESSGSSA*SCRCTA
Trigger: CGCAGTACAGCGGCAAGATCAAGCACTGGAACCGCT...CGACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGAGGAATTTGCTTTGCTaGGGAGAACTGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTRNLLC*GELDGW
Trigger: CCACCCATCCAGTTCTCCTCAGCAAAGCAAATTCCT...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGAGGGGCAGACAGGATaGGGCTCTTCTGTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCEGQTG*GSSVKS
Trigger: GGACTTTACAGAAGAGCCTCATCCTGTCTGCCCCTC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATCCCAGGAGCGGAGGGTaGCATCAAGAGGACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHPRSGG*HQEDRG
Trigger: TCCCCTGTCCTCTTGATGTCACCCTCCGCTCCTGGG...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACCCCTTGGACCCTCTCTaGGTGGTCTCTCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHPLDPL*VVSQGT
Trigger: TGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGG...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCCCCTTGGACCCTCTCTaGGTGGTCTCTCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELPLDPL*VVSQGT
Trigger: TGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGG...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAGGGCTCGGGCTTTGGTaGAGCAGAGGGTCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKGLGLW*SRGSPC
Trigger: ACACGGGGACCCTCTGCTTCACCAAAGCCCGAGCCC...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGAGGGAGGCCTAGGCCAGTaGCACATGGATTCCGGATGG +
Preference number: 4 (lower is better)
Translates to: VIYSHPRSWLLEAGGRREGGLGQ*HMDSGW
Trigger: CCATCCGGAATCCATGTGTCACTGGCCTAGGCCTCC...CTCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGACCTGGTTAGGAGATaGACTTGTCTGAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCDLVRR*TCLKKP
Trigger: GGGCTTTTTCAGACAAGTGCATCTCCTAACCAGGTC...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACACACCTTGTGGCGGCTaGACTTCACCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHTPCGG*TSPSGR
Trigger: CCTGCCAGAAGGTGAAGTGCAGCCGCCACAAGGTGT...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCAGTTTCACGGTCGGCTaGTTGATCCTGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCSFTVG*LILCSS
Trigger: GCTGGAGCACAGGATCAAGCAGCCGACCGTGAAACT...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCGCACCGCCAGCTGCTTaGTGCTCAGGCACGCCTGTT +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSAPPAA*CSGTPV
Trigger: AACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGC...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTTGCAAGTCTCTGGTTTaGCATCGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCCKSLV*HRRWRW
Trigger: CCACCTCCACCGCCGATGGCAAACCAGAGACTTGCA...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCCCAGGTCCTGACCGGTaGAAGTCTCTGGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCPGPDR*KSLVCH
Trigger: ATGGCAAACCAGAGACTTGCACCGGTCAGGACCTGG...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATACCAGCAGTCACCGCTaGTCTGGTCACACTGCATCT +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHTSSHR*SGHTAS
Trigger: AGATGCAGTGTGACCAGAGCAGCGGTGACTGCTGGT...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCGTCCCAGCCATCTGTaGCACACACATGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAARPSHL*HTHAMH
Trigger: GTGCATGGCATGTGTGTGGCACAGATGGCTGGGACG...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCATTGGGTGACTCACTCTaGCAGGAGCAGTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: LAGGRSWSQSAERLQLSALGDSL*QEQCGS
Trigger: TGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAA...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGTTGGGTGACTCACTCTaGCAGGAGCAGTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: KTATRRPKGPLGDSLCQELGDSL*QEQCGS
Trigger: TGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAA...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATAGAGTGCGGAAAGGCTaGAGCTTTCGGCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHRVRKG*SFRQLL
Trigger: AAGCAGCTGCCGAAAGCTGCAGCCTTTCCGCACTCT...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTGAGATGAGCTCACACTaGTCAGGGGATGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGEMSSH*SGDVGE
Trigger: TTCCCCAACATCCCCTGAGCAGTGTGAGCTCATCTC...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCCTAATTCCCCTACCTaGCTAAGCCAGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAPNSPT*LSQGSG
Trigger: CCCACTCCCCTGGCTTAGGCAGGTAGGGGAATTAGG...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCCACGGGACTCTTGAGTaGCCATCAACGCACACGCAC +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELHGTLE*PSTHTH
Trigger: GTGCGTGTGCGTTGATGGGCACTCAAGAGTCCCGTG...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGCCTCTCTGCTGTGGCCGGGCTaGTGCCCAGGAAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRNSHLSDGNKKIQISASLLWPG*CPGSGR
Trigger: CCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCAG...AGAGGCAGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCGCAATGCACACCTTGTaGCGGCTGCACTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCAMHTL*RLHFTF
Trigger: GAAGGTGAAGTGCAGCCGCCACAAGGTGTGCATTGC...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACAACCGGTGCAAGTCTCTaGTTTGCCATCGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTTGASL*FAIGGG
Trigger: TCCACCGCCGATGGCAAACCAGAGACTTGCACCGGT...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGAAGAGGTCAGCACTaGTGTCCAGCTTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFGRGQH*CPAWRT
Trigger: TGTTCTCCAAGCTGGACACCAGTGCTGACCTCTTCC...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCGCGGCCAGCTCCGTCTaGTCCAGGAAGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACAASSV*SRKRSA
Trigger: TGCTGACCTCTTCCTGGACCAGACGGAGCTGGCCGC...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCGGGATGAAGATGCCTaGCTTCTTCTTGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSERDEDA*LLLGGL
Trigger: GAGGCCGCCAAGAAGAAGCCAGGCATCTTCATCCCG...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACTTCAAAACAGAGCTTaGGGAAGCCCCTCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTLQNRA*GSPSAG
Trigger: CCCCGCAGAGGGGCTTCCCCAAGCTCTGTTTTGAAG...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACCCCAGGCCACCAGGATaGCCCCCAGGTTCACACACA +
Preference number: 4 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHPRPPG*PPGSHT
Trigger: TGTGTGTGAACCTGGGGGCCATCCTGGTGGCCTGGG...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAGTTTATGGAGTTAAGTaGGGCTCTGCTATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGVYGVK*GSAISP
Trigger: GGGGGAAATAGCAGAGCCCCACTTAACTCCATAAAC...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCGAACTGAGCCGGGGCTaGAGTGGGGAGGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSELSRG*SGEVKD
Trigger: GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTC...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGGAAACAGGCAAGGCTaGACCCCTGCAATCCTACCA +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCGNRQG*TPAILP
Trigger: TGGTAGGATTGCAGGGGTCCAGCCTTGCCTGTTTCC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTGGGTGGCAGGCCCCTTaGTCAAGGTCACAAATCAAG +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIGWQAP*SRSQIK
Trigger: CTTGATTTGTGACCTTGACCAAGGGGCCTGCCACCC...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACAGGGGAAAGGCAGGGCTaGATGACTCACGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTGERQG*MTHGTL
Trigger: AAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTCCCC...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGAGAGACCTGGCTGCCCGTaGTTCCTGCTGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VIYSHPRSWLLEAGGRRERPGCP*FLLSSV
Trigger: CACAGAGGACAGCAGGAACCACGGGCAGCCAGGTCT...CTCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATGGAGATGCACTTGTCTaGAAAAGCCCAGCACTGGAC +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHGDALV*KSPALD
Trigger: GTCCAGTGCTGGGCTTTTTCAGACAAGTGCATCTCC...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACCAGCTTCTTGCGACTaGTGCACATGGCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAPASCD*CTWPAG
Trigger: ACCAGCGGGCCATGTGCATCAGTCGCAAGAAGCTGG...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACCGTACTTGTCCAGGTTaGTGGCGGCCAGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHRTCPG*WRPAPS
Trigger: AGACGGAGCTGGCCGCCATCAACCTGGACAAGTACG...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCAGGTGTCACAGGAGTTaGAGAAGGGACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: QGPSDCISGSVLEVACCCRCHRS*RRDGCR
Trigger: TCTGCATCCGTCCCTTCTTCAACTCCTGTGACACCT...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAACTGGCCCGTCTCATCTaGGGCTGGTGGGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKLARLI*GWWGCH
Trigger: GTGACATCCCCACCAGCCTCAGATGAGACGGGCCAG...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCGAGGGGCAGACAGGATaGGGCTCTTCTGTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELEGQTG*GSSVKS
Trigger: GGACTTTACAGAAGAGCCTCATCCTGTCTGCCCCTC...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCGGAACAGCATTTCCCTaGACTGAGCCGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSGTAFP*TEPGLE
Trigger: CTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCC...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACCGGAAGCGGTTCCAGTaGTTGATCTTGCCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHRKRFQ*LILPLY
Trigger: GTACAGCGGCAAGATCAAGCACTGGAACCGCTTCCG...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTGGCTGCTTGATCCTGTaGTCCAGCTTCTTGCGACTG +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAGCLIL*SSFLRL
Trigger: CAGTCGCAAGAAGCTGGAGCACAGGATCAAGCAGCC...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACAAGTTTCACGGTCGGCTaGTTGATCCTGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTSFTVG*LILCSS
Trigger: GCTGGAGCACAGGATCAAGCAGCCGACCGTGAAACT...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGCCATGTGGCAGGGCTTaGAGATGGAGTCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARPCGRA*RWSLCF
Trigger: GAAACAAAGACTCCATCTGCAAGCCCTGCCACATGG...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACCCAGGTCCTGACCGGTaGAAGTCTCTGGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHPGPDR*KSLVCH
Trigger: ATGGCAAACCAGAGACTTGCACCGGTCAGGACCTGG...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAAGCCAATGGAGTCCTTaGAGCTGGCCCCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHASQWSP*SWPPGS
Trigger: AGAGCCTGGGGGCCAGCTGCAAGGACTCCATTGGCT...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACACCTCCTGGATCTGGATaGGCTCCAGCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTPPGSG*APALPG
Trigger: GCCTGGCAGAGCTGGAGCGCATCCAGATCCAGGAGG...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACGTTCTCGAAGTTGCCTaGTGCTGCTCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHVLEVA*CCSELC
Trigger: GCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAAC...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACTTGGGTGACTCACTCTaGCAGGAGCAGTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: HSARSSVDQGHICQRMPHLGDSL*QEQCGS
Trigger: TGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAA...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACACAAAGGGACAGGGCTTaGTGTGGCTGGGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTQRDRA*CGWASW
Trigger: CCAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTG...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGAGGTCATGGTGTGGCCTaGGTTGTACTGGGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: SHLFSPTELAIGSRWKKGGHGVA*VVLGGS
Trigger: CGACCCACCCAGTACAACGCAGGCCACACCATGACC...TCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp ACTTTGGGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGATGGGCCGGCCTGCTaGCGCCCCCTCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLGRNSHLSDGNKKIQISDGPAC*RPLAAV
Trigger: CACAGCAGCGAGGGGGCGGCAGCAGGCCGGCCCATC...AGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCCCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATCACTGGTGTCCAGCTTaGAGAACATCCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHHWCPA*RTSSQW
Trigger: CCATTGGCTGGATGTTCTCCAAGCTGGACACCAGTG...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCTCAGGCGCCCTCAAGTaGATGAGGGGACCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSSGALK*MRGPQQ
Trigger: TTGCTGGGGTCCCCTCATCCACTTGAGGGCGCCTGA...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTGACAGCTCTCTCTGTTaGTCTGGGCAGGACAGGAGT +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAADSSLC*SGQDRS
Trigger: ACTCCTGTCCTGCCCAGACCAACAGAGAGAGCTGTC...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTGCAGGAGGAAGATCATaGTCTCAGAGTGCGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIAGGRS*SQSAER
Trigger: CCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGC...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAAGCAGAGGGCTGATGTaGAACAGCATTTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGSRGLM*NSISLN
Trigger: GTTCAGGGAAATGCTGTTCCACATCAGCCCTCTGCT...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGGGAAACAGGCAAGGCTaGACCCCTGCAATCCTACCA +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSEGNRQG*TPAILP
Trigger: TGGTAGGATTGCAGGGGTCCAGCCTTGCCTGTTTCC...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTCTTCTCCATCACCCTTaGACCCTCTCTGAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHILLHHP*TLSEWS
Trigger: AGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAG...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGAGGGAGAGGTCATGGTGTaGCCTGCGTTGTACTGGGTG +
Preference number: 4 (lower is better)
Translates to: VIYSHPRSWLLEAGGRREGEVMV*PALYWV
Trigger: CACCCAGTACAACGCAGGCCACACCATGACCTCTCC...CTCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
3UTR CAA 72 bp TTCAGCTCCACAGGGAGCTGCTGTTTTGTCTACCTTTaGAGGGGACCAGTCTCAGTAGGGCGAAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSSTGSCCFVYL*RGPVSVGRKAV
Trigger: CACTGCCTTTCGCCCTACTGAGACTGGTCCCCTCAAAAGGTAGACAAAACAGCAGCTCCCTGTGGAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAATTGCTCGTCCTCCATaGAATTGCCGGGGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SFPSDLHWSHFGRSNSQRIARPP*NCRGSR
Trigger: GCGAGACCCCCGGCAATTTCATGGAGGACGAGCAAT...TCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACAGCTTCATCTCCTTGCTaGTTGTCCTCCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTASSPC*LSSQLL
Trigger: CAAGAGCTGGGAGGACAATCAGCAAGGAGATGAAGC...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAAGGTGTCACAGGAGTTaGAGAAGGGACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTRCHRS*RRDGCR
Trigger: TCTGCATCCGTCCCTTCTTCAACTCCTGTGACACCT...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACAGGTGTCACAGGAGTTaGAGAAGGGACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHRCHRS*RRDGCR
Trigger: TCTGCATCCGTCCCTTCTTCAACTCCTGTGACACCT...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCCGTCGCAGCTCGGGATaGAGATGCCTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSRRSSG*RCLASS
Trigger: AGAAGAAGCCAGGCATCTTCATCCCGAGCTGCGACG...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACCGTCGCAGCTCGGGATaGAGATGCCTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHRRSSG*RCLASS
Trigger: AGAAGAAGCCAGGCATCTTCATCCCGAGCTGCGACG...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATTCGCAGGCCAGAGCTTaGCCTCAGAAGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHSQARA*PQKQEG
Trigger: TCCCTCTTGCTTCTGAGGTCAAGCTCTGGCCTGCGA...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAGCACTCACCACGCACTaGAGGGCATCACAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKALTTH*RASQPQ
Trigger: TTGGGGCTGTGATGCCCTTCAGTGCGTGGTGAGTGC...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAAGAGCCTCACTGCATTaGCCCCACACCCACCACTCA +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHARASLH*PHTHHS
Trigger: TGAGTGGTGGGTGTGGGGTCAATGCAGTGAGGCTCT...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGAACAAAAAGCCACTTTaGGGCCGCCCTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSENKKPL*GRPSAP
Trigger: TGGAGCTGAAGGGCGGCCTCAAAGTGGCTTTTTGTT...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTGAAGTTGGAAGCAGGTaGAGCTCATGGAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIEVGSR*SSWKAE
Trigger: TTCAGCCTTCCATGAGCTTCACCTGCTTCCAACTTC...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAGACTCACGGGACTCTTaGGTGCCCATCAACGCACAC +
Preference number: 4 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLDSRDS*VPINAH
Trigger: GTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTC...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGGTCCTTCTGACTaGATTTCTGGATCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCQGPSD*ISGSVL
Trigger: GAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACTCACTTTTCCACATTaGAGGCTTCAAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGLTFPH*RLQNRA
Trigger: AGCTCTGTTTTGAAGCCTGCAATGTGGAAAAGTGAG...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACCTCACTTTTCCACATTaGAGGCTTCAAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDLTFPH*RLQNRA
Trigger: AGCTCTGTTTTGAAGCCTGCAATGTGGAAAAGTGAG...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCCACACGCACACACGCTaGACTCACCACGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACHTHTR*THHALK
Trigger: CTTCAGTGCGTGGTGAGTGCAGCGTGTGTGCGTGTG...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCCGCTGTACTGCGAGATaGACGACAGCCATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: FPSDLHWSHFGRSNSQRVRCTAR*TTAIAR
Trigger: ACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCG...GACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCGAGTCTTTGTTTCCATaGAGTTTCACGGTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCESLFP*SFTVGC
Trigger: GCAGCCGACCGTGAAACTCCATGGAAACAAAGACTC...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTCACTGGTGTCCAGCTTaGAGAACATCCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCHWCPA*RTSSQW
Trigger: CCATTGGCTGGATGTTCTCCAAGCTGGACACCAGTG...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACGGGATGAAGATGCCTaGCTTCTTCTTGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHARDEDA*LLLGGL
Trigger: GAGGCCGCCAAGAAGAAGCCAGGCATCTTCATCCCG...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAAGCTCCAGGCCCAGCTaGTCCACACACCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKSSRPS*STHQQS
Trigger: TGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCT...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGCTTGCCTGCTGCTCCTaGCCCTCAGGCGCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQLACCS*PSGALK
Trigger: CTTGAGGGCGCCTGAGGGCCAGGAGCAGCAGGCAAG...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTATGGGTGGCTCTCCCCTaGCAGGAGGAAGATCATGGT +
Preference number: 4 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLWVALP*QEEDHG
Trigger: ACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCA...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTACTTCAAAACAGAGCTTaGGGAAGCCCCTCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLLQNRA*GSPSAG
Trigger: CCCCGCAGAGGGGCTTCCCCAAGCTCTGTTTTGAAG...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTTTGCTGAGGAGAACTaGATGGGTGGGGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCFAEEN*MGGGKQ
Trigger: CTGTTTTCCCCCACCCATCCAGTTCTCCTCAGCAAA...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAAACTGGGCTGCGGAATaGGAAGCAGTTTATGGAGTT +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGNWAAE*EAVYGV
Trigger: AACTCCATAAACTGCTTCCCATTCCGCAGCCCAGTT...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTAGCAGAGGGCTGATGTaGAACAGCATTTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHISRGLM*NSISLN
Trigger: GTTCAGGGAAATGCTGTTCCACATCAGCCCTCTGCT...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGATGGACCCTCTCTGAGTaGTCTCTCAAGGCACATTTA +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGWTLSE*SLKAHL
Trigger: TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCA...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACCTTCTCCATCACCCTTaGACCCTCTCTGAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHLLHHP*TLSEWS
Trigger: AGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAG...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTAGCAGTTTGCTCTGCTaGGAACTTCCTCGGGATGTC +
Preference number: 4 (lower is better)
Translates to: CISGSVLEVACCCSELCCSSLLC*ELPRDV
Trigger: GACATCCCGAGGAAGTTCCCAGCAGAGCAAACTGCT...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAGGGGAAAGGCAGGGCTaGATGACTCACGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLGERQG*MTHGTL
Trigger: AAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTCCCC...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAAGCGGTTCCAGTGCTTaGTCTTGCCGCTGTACTGCG +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTSGSSA*SCRCTA
Trigger: CGCAGTACAGCGGCAAGATCAAGCACTGGAACCGCT...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGTCCTCCCAGCTCTTaGTATAGTCATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCCPPSS*YSHPPL
Trigger: AAGTGGAGGATGACTATATCAAGAGCTGGGAGGACA...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATCACGGTCGGCTGCTTaGTCCTGTGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTSRSAA*SCAPAS
Trigger: AGAAGCTGGAGCACAGGATCAAGCAGCCGACCGTGA...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACGGACTCGGAAGATGTTaGTTCCAGGGCAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHGLGRC*FQGRVR
Trigger: CCTCACTCTGCCCTGGAATCAACATCTTCCGAGTCC...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCCTGCAACCTTGCTCATaGGGAAACCTTAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: EQGPSDCISGSVLEVACCLQPCS*GNLNLV
Trigger: GACAAGGTTAAGGTTTCCTCATGAGCAAGGTTGCAG...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACCACCCCCTCCAAAGTaGAGTTGGAAGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAPPPPK*SWKQVK
Trigger: CTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGG...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCAAAGGCAGGGCTGGATaGCTCACGGGACTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSKGRAG*LTGLLS
Trigger: ACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTT...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACTGTCCTCCCAGCTCTTaGTATAGTCATCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: HSARSSVDQGHICQRMPHCPPSS*YSHPSR
Trigger: ACGTGAAGGATGACTATATCAAGAGCTGGGAGGACA...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536168.2
CDS-3UTR GCA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATATGGACGACAGCCATTaGTCGTCCTCCATGAAATTG +
Preference number: 4 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHMDDSH*SSSMKL
Trigger: CAATTTCATGGAGGACGAGCAATGGCTGTCGTCCAT...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGACGGAAGCGGTTCCAGTaGTTGATCTTGCCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SHLFSPTELAIGSRWKKGRKRFQ*LILPLY
Trigger: GTACAGCGGCAAGATCAAGCACTGGAACCGCTTCCG...TCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATCGGAAGCGGTTCCAGTaGTTGATCTTGCCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHRKRFQ*LILPLY
Trigger: GTACAGCGGCAAGATCAAGCACTGGAACCGCTTCCG...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAACACCTTGTGGCGGCTaGACTTCACCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKTPCGG*TSPSGR
Trigger: CCTGCCAGAAGGTGAAGTGCAGCCGCCACAAGGTGT...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCGGCTGCTTGATCCTGTaGTCCAGCTTCTTGCGACTG +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACGCLIL*SSFLRL
Trigger: CAGTCGCAAGAAGCTGGAGCACAGGATCAAGCAGCC...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACCATGTGGCAGGGCTTaGAGATGGAGTCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTPCGRA*RWSLCF
Trigger: GAAACAAAGACTCCATCTGCAAGCCCTGCCACATGG...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCCTCAGGCACGCCTGTTaGTCCAGCTTACACACAGAG +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACLRHAC*SSLHTE
Trigger: CTCTGTGTGTAAGCTGGAGCAACAGGCGTGCCTGAG...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACCAGGTCCTGACCGGTaGAAGTCTCTGGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAPGPDR*KSLVCH
Trigger: ATGGCAAACCAGAGACTTGCACCGGTCAGGACCTGG...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACCAGCAGTCACCGCTaGTCTGGTCACACTGCATCT +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACTSSHR*SGHTAS
Trigger: AGATGCAGTGTGACCAGAGCAGCGGTGACTGCTGGT...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTACTCGAAGTTGCCTGCTaGTGCTCAGAGCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLLEVAC*CSELCC
Trigger: ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAG...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGTTCTCGAAGTTGCCTaGTGCTGCTCAGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAVLEVA*CCSELC
Trigger: GCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAAC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCCAGGGTCCTTCTGACTaGATTTCTGGATCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELQGPSD*ISGSVL
Trigger: GAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACACGTCCCAGCCATCTGTaGCACACACATGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTRPSHL*HTHAMH
Trigger: GTGCATGGCATGTGTGTGGCACAGATGGCTGGGACG...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGATCTAGGATTCAGAGCTaGCCCATCTCAACACCTAAA +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGSRIQS*PISTPK
Trigger: TTTAGGTGTTGAGATGGGGCAGCTCTGAATCCTAGA...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTCAATCAGAACTGGGCTaGGGAATGGGAAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIQSELG*GMGSSL
Trigger: TAAACTGCTTCCCATTCCGCAGCCCAGTTCTGATTG...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACTCTAAGCTCAGTTATTaGACATCACACAGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHSKLSY*TSHSLS
Trigger: GCTTAAACTGTGTGATGTGCAATAACTGAGCTTAGA...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCCGCTGTACTGCGAGATaGACGACAGCCATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSRCTAR*TTAIAR
Trigger: ACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCG...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCATCTGGCAGGGGTCCTTaGTGGTATCCAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHASGRGP*WYPGLH
Trigger: ATGAAGCCCTGGATACCACCAAGGACCCCTGCCAGA...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCGAGTCTTTGTTTCCATaGAGTTTCACGGTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELESLFP*SFTVGC
Trigger: GCAGCCGACCGTGAAACTCCATGGAAACAAAGACTC...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGCTGGAGGACACGGCTaGGGGATCTCATTTCATGGA +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAAGGHG*GISFHG
Trigger: TCCATGAAATGAGATCCCCCAGCCGTGTCCTCCAGC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCGCTGGAGGACACGGCTaGGGGATCTCATTTCATGGA +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACAGGHG*GISFHG
Trigger: TCCATGAAATGAGATCCCCCAGCCGTGTCCTCCAGC...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGGGAGAACTGGATGGGTaGGGGAAAACAGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSEGELDG*GKTATN
Trigger: GTTTGTTGCTGTTTTCCCCCACCCATCCAGTTCTCC...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCGTTTATGGAGTTAAGTaGGGCTCTGCTATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCVYGVK*GSAISP
Trigger: GGGGGAAATAGCAGAGCCCCACTTAACTCCATAAAC...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTAACTGGGCTGCGGAATaGGAAGCAGTTTATGGAGTT +
Preference number: 4 (lower is better)
Translates to: RGLWVTHSARSSVDQGHINWAAE*EAVYGV
Trigger: AACTCCATAAACTGCTTCCCATTCCGCAGCCCAGTT...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACTCAACAATCAGAACTaGGCTGCGGAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SARSSVDQGHICQRMPHTLNNQN*AAEWEA
Trigger: TGCTTCCCATTCCGCAGCCCAGTTCTGATTGTTGAG...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCGGGTGGCAGGCCCCTTaGTCAAGGTCACAAATCAAG +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSGWQAP*SRSQIK
Trigger: CTTGATTTGTGACCTTGACCAAGGGGCCTGCCACCC...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp ACAAATTTCCAAGGAACTTGTGGATGCACGCAGTTTAAGGAGAAAACGGGAGAGCTCAGCCTGGAGACCTaGCTGCCCGTGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TNFQGTCGCTQFKEKTGELSLET*LPVVPA
Trigger: AGCAGGAACCACGGGCAGCCAGGTCTCCAGGCTGAG...CTCTCCCGTTTTCTCCTTAAACTGCGTGCATCCACAAGTTCCTTGGAAATTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp ACTTTGGGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGCGGCTCATCTGCGCTaGGCCTGCAGGTGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: TLGRNSHLSDGNKKIQISAAHLR*ACRCFG
Trigger: CCCGAAGCACCTGCAGGCCCAGCGCAGATGAGCCGC...AGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCCCAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACATGTCCTCCCAGCTCTTaGTATAGTCATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTCPPSS*YSHPPL
Trigger: AAGTGGAGGATGACTATATCAAGAGCTGGGAGGACA...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAGCTTCATCTCCTTGCTaGTTGTCCTCCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLASSPC*LSSQLL
Trigger: CAAGAGCTGGGAGGACAATCAGCAAGGAGATGAAGC...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACGCTTCATCTCCTTGCTaGTTGTCCTCCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHASSPC*LSSQLL
Trigger: CAAGAGCTGGGAGGACAATCAGCAAGGAGATGAAGC...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATCCTCTTCTCATCTGGTaGGATGAGCTCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHPLLIW*DELTLL
Trigger: GAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGG...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAACAAAAAGCCACTTTaGGGCCGCCCTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHNKKPL*GRPSAP
Trigger: TGGAGCTGAAGGGCGGCCTCAAAGTGGCTTTTTGTT...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCGTCCTGCTGTCCTCTGTaGATTACAACCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: FPLTFTGPILADQTASESSCCPL*ITTCQF
Trigger: AAACTGGCAGGTTGTAATTCACAGAGGACAGCAGGA...CGACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCATGGACGACAGCCATTaGTCGTCCTCCATGAAATTG +
Preference number: 4 (lower is better)
Translates to: SDCISGSVLEVACCCSELMDDSH*SSSMKL
Trigger: CAATTTCATGGAGGACGAGCAATGGCTGTCGTCCAT...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAATCTTGCCGCTGTACTaGGAGATGGACGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLILPLY*EMDDSH
Trigger: ATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCATCTTGCCGCTGTACTaGGAGATGGACGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACILPLY*EMDDSH
Trigger: ATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATCTTGCCGCTGTACTaGGAGATGGACGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHILPLY*EMDDSH
Trigger: ATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATCCGTTCTCGAAGTTaGCTGCTGCTGCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHIRSRS*LLLLRA
Trigger: AGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGAT...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGTCACCCTGTTCTACCTaGACCACCTGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQSPCST*TTWATW
Trigger: CCAGGTGGCCCAGGTGGTGCAGGTAGAACAGGGTGA...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAAGAGTGCGGAAAGGCTaGAGCTTTCGGCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTRVRKG*SFRQLL
Trigger: AAGCAGCTGCCGAAAGCTGCAGCCTTTCCGCACTCT...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGCCCAGAGAGCCTCACTaGATTGACCCCACACCCACC +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQPREPH*IDPTPT
Trigger: GGTGGGTGTGGGGTCAATGCAGTGAGGCTCTCTGGG...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCAATCAGAACTGGGCTaGGGAATGGGAAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSEQSELG*GMGSSL
Trigger: TAAACTGCTTCCCATTCCGCAGCCCAGTTCTGATTG...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACCACATTTATTTTCTCTaGTGCAACCTACCAGATCTG +
Preference number: 4 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDHIYFL*CNLPDL
Trigger: CAGATCTGGTAGGTTGCAGCAGAGAAAATAAATGTG...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACGGCTGGAAAGCAGTTTaGTCTGCTGGGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHGWKAV*SAGNFL
Trigger: GAGGAAGTTCCCAGCAGAGCAAACTGCTTTCCAGCC...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp ACTTTGGGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGCCTGGAGACCTGGCTaGCCGTGGTTCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLGRNSHLSDGNKKIQISAWRPG*PWFLLS
Trigger: GGACAGCAGGAACCACGGGCAGCCAGGTCTCCAGGC...AGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCCCAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACACGCTGTACTGCGAGATaGACGACAGCCATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTRCTAR*TTAIAR
Trigger: ACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCG...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGGAAGAGGTCAGCACTaGTGTCCAGCTTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAGRGQH*CPAWRT
Trigger: TGTTCTCCAAGCTGGACACCAGTGCTGACCTCTTCC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACGGAAGAGGTCAGCACTaGTGTCCAGCTTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHGRGQH*CPAWRT
Trigger: TGTTCTCCAAGCTGGACACCAGTGCTGACCTCTTCC...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTGGGGATCTCATTTCATaGATTTTGACCTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVGDLIS*ILTCQF
Trigger: AAATTGACAGGTCAAAATCCATGAAATGAGATCCCC...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGGAGCAGCCCAGATCATaGCTCCACCACGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQEQPRS*LHHETQ
Trigger: CTGGGTCTCGTGGTGGAGCCATGATCTGGGCTGCTC...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGATCCTTTATGCATGTGTaGAGTGTACTTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGSFMHV*SVLVSL
Trigger: TAAGGAAACAAGTACACTCCACACATGCATAAAGGA...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CAA 72 bp TCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTaGTCAGCGCATGCCACACACACACACACATACACA +
Preference number: 4 (lower is better)
Translates to: SLCQEQCGSRTH*SAHATHTHTYT
Trigger: TGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR TCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGCAGACAGGGGTCGGTTaGGCCAGGGTAGAAACCAAG +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQQTGVG*ARVETK
Trigger: CTTGGTTTCTACCCTGGCTCAACCGACCCCTGTCTG...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACCACAAATCAAGGAGCTaGGGAAGGACCGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHHKSRS*GRTDLQ
Trigger: TTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTG...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATGAAGTTGGAAGCAGGTaGAGCTCATGGAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHEVGSR*SSWKAE
Trigger: TTCAGCCTTCCATGAGCTTCACCTGCTTCCAACTTC...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCGACCTGGTTAGGAGATaGACTTGTCTGAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: FPSDLHWSHFGRSNSQRVDLVRR*TCLKKP
Trigger: GGGCTTTTTCAGACAAGTGCATCTCCTAACCAGGTC...GACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCCCATGTGGCAGGGCTTaGAGATGGAGTCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSPCGRA*RWSLCF
Trigger: GAAACAAAGACTCCATCTGCAAGCCCTGCCACATGG...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGTGCAAGTCTCTGGTTTaGCATCGGCGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQCKSLV*HRRWRW
Trigger: CCACCTCCACCGCCGATGGCAAACCAGAGACTTGCA...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATCAGGGTCCTTCTGACTaGATTTCTGGATCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHQGPSD*ISGSVL
Trigger: GAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTTCTAGGATTCAGAGCTaGCCCATCTCAACACCTAAA +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAASRIQS*PISTPK
Trigger: TTTAGGTGTTGAGATGGGGCAGCTCTGAATCCTAGA...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATAAGGACACACAAACGTaGACAGCCAGAAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHKDTQT*TARRPR
Trigger: TCTGGGTCTTCTGGCTGTGCACGTTTGTGTGTCCTT...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCGAAAGCAGTTTGCTCTaGTGGGAACTTCCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSESSLL*WELPRD
Trigger: ATCCCGAGGAAGTTCCCAGCAGAGCAAACTGCTTTC...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGCACGGGACTCTTGAGTaGCCATCAACGCACACGCAC +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQHGTLE*PSTHTH
Trigger: GTGCGTGTGCGTTGATGGGCACTCAAGAGTCCCGTG...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGAGTCTTTGTTTCCATaGAGTTTCACGGTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAESLFP*SFTVGC
Trigger: GCAGCCGACCGTGAAACTCCATGGAAACAAAGACTC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGCAGTCACCGCTGCTCTaGTCACACTGCATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQQSPLL*SHCIFR
Trigger: CCGGAAGATGCAGTGTGACCAGAGCAGCGGTGACTG...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAGCTTCTCTAGTGTTTaGGGATCCGGCAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHSFSSV*GSGKGT
Trigger: TGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCT...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAAGCTTCTCTAGTGTTTaGGGATCCGGCAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHASFSSV*GSGKGT
Trigger: TGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCT...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGCGTTCTTTGAACACATaGTTAAGCTTCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGRSLNT*LSFFQH
Trigger: ATGCTGGAAGAAGCTTAACCATGTGTTCAAAGAACG...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGACCCTCTGACCTTCACTaGTCCCATTTTGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SHLFSPTELAIGSRWKKGPSDLH*SHFGRS
Trigger: TGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGG...TCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp ATTTCTTTTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGTCTCACCCACGGAGCTaGCTATTGGAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ISFPSDLHWSHFGRSNSQSHPRS*LLEAGG
Trigger: TCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGA...CTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAAAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAAGGAATTTGCTTTGCTaGGGAGAACTGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTRNLLC*GELDGW
Trigger: CCACCCATCCAGTTCTCCTCAGCAAAGCAAATTCCT...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCCTGCAACCTTGCTCATaGGGAAACCTTAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSLQPCS*GNLNLV
Trigger: GACAAGGTTAAGGTTTCCTCATGAGCAAGGTTGCAG...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACGGAAATCCAAGCACTTaGACACAATTCCTAACTCTA +
Preference number: 4 (lower is better)
Translates to: HSARSSVDQGHICQRMPHGNPST*TQFLTL
Trigger: TAGAGTTAGGAATTGTGTTCAAGTGCTTGGATTTCC...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGACCTGGTTAGGAGATaGACTTGTCTGAAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHADLVRR*TCLKKP
Trigger: GGGCTTTTTCAGACAAGTGCATCTCCTAACCAGGTC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATGGACGACAGCCATTaGTCGTCCTCCATGAAATTG +
Preference number: 4 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHMDDSH*SSSMKL
Trigger: CAATTTCATGGAGGACGAGCAATGGCTGTCGTCCAT...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR GCA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAAGCTCCACAGGGAGCTaGTGTTTTGTCTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: GHICQRMPHTHTHTHMHASSTGS*CFVYLL
Trigger: CAAAAGGTAGACAAAACAGCAGCTCCCTGTGGAGCT...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp CCAACGGACCCCACCCCCTCCAAAGTGAAGTTGGAAGCAGGTGAAGCTCATGGAGGGGATCTCATTTCATaGATTTTGACCTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: PTDPTPSKVKLEAGEAHGGDLIS*ILTCQF
Trigger: AAATTGACAGGTCAAAATCCATGAAATGAGATCCCC...TCCATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGGGGTGGGGTCCGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAATTTGCTGAGGAGAACTaGATGGGTGGGGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKFAEEN*MGGGKQ
Trigger: CTGTTTTCCCCCACCCATCCAGTTCTCCTCAGCAAA...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCTCACAGCCCCAAGTCTaGGTAAGAAATTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSSQPQV*VRNSPP
Trigger: TGGTGGAGAATTTCTTACCCAGACTTGGGGCTGTGA...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCTGGACCCTCTCTGAGTaGTCTCTCAAGGCACATTTA +
Preference number: 4 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSWTLSE*SLKAHL
Trigger: TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCA...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp GGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGCCTCTCACGGAGCTGGCTATTaGAAGCAGGTGGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRNSHLSDGNKKIQISASHGAGY*KQVEEG
Trigger: CCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTG...AGAGGCAGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp ACAAATTTCCAAGGAACTTGTGGATGCACGCAGTTTAAGGAGAAAACGGGAGAGATACAGAGAGACAGGTaGGTAGCCCAGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: TNFQGTCGCTQFKEKTGEIQRDR*VAQCHG
Trigger: CCCATGGCACTGGGCTACCCACCTGTCTCTCTGTAT...CTCTCCCGTTTTCTCCTTAAACTGCGTGCATCCACAAGTTCCTTGGAAATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGAACAAACAAAAGAAATaGACAGGGCCTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PSDCISGSVLEVACCCSENKQKK*TGPLLI
Trigger: GATGAGAAGAGGCCCTGTGCATTTCTTTTGTTTGTT...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAAGCTCCACAGGGAGCTaGTGTTTTGTCTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKSSTGS*CFVYLL
Trigger: CAAAAGGTAGACAAAACAGCAGCTCCCTGTGGAGCT...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCACATTTATTTTCTCTaGTGCAACCTACCAGATCTG +
Preference number: 4 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAHIYFL*CNLPDL
Trigger: CAGATCTGGTAGGTTGCAGCAGAGAAAATAAATGTG...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCTCTAAGCTCAGTTATTaGACATCACACAGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCSKLSY*TSHSLS
Trigger: GCTTAAACTGTGTGATGTGCAATAACTGAGCTTAGA...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACACATCAGCATCACGTTTaGCATCATCATACCGTAATG +
Preference number: 4 (lower is better)
Translates to: THLSAHATHTHTYTHACTHQHHV*HHHTVM
Trigger: CATTACGGTATGATGATGTCAAACGTGATGCTGATG...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317376.8
CDS-3UTR TCA 90 bp AGTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAACATTTCTTTTCCCTCTaGCCTTCACTGGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: SKSFILTHGAGYWKQVEEHFFSL*PSLVPF
Trigger: AAATGGGACCAGTGAAGGTCAGAGGGAAAAGAAATG...TTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR GCA 90 bp GTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGCAAGGAACTTGTGGATaGACGCAGTTTAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VSHLFSPTELAIGSRWKKQGTCG*TQFKEK
Trigger: TTTCTCCTTAAACTGCGTGCATCCACAAGTTCCTTG...CTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCCGTTCTTTGAACACATaGTTAAGCTTCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RTHLSAHATHTHTYTHACRSLNT*LSFFQH
Trigger: ATGCTGGAAGAAGCTTAACCATGTGTTCAAAGAACG...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
3UTR CAA 72 bp AAGAAATTCTCCACCAAAGGTGTTAAGGAATTTGCTTaGCTGAGGAGAACTGGATGGGTGGGGGAAAACAGC +
Preference number: 4 (lower is better)
Translates to: KKFSTKGVKEFA*LRRTGWVGENS
Trigger: GCTGTTTTCCCCCACCCATCCAGTTCTCCTCAGCAAAGCAAATTCCTTAACACCTTTGGTGGAGAATTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR TCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAGGAAATCCAAGCACTTaGACACAATTCCTAACTCTA +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKGNPST*TQFLTL
Trigger: TAGAGTTAGGAATTGTGTTCAAGTGCTTGGATTTCC...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR GCA 90 bp TCACAAATCAAGGAGCTGAGGAAGGACCGATCTGCAACCTTGCTCATGAGGAAAAACAAACAAAAGAAATaGACAGGGCCTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: SQIKELRKDRSATLLMRKNKQKK*TGPLLI
Trigger: GATGAGAAGAGGCCCTGTGCATTTCTTTTGTTTGTT...TTTCCTCATGAGCAAGGTTGCAGATCGGTCCTTCCTCAGCTCCTTGATTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CCA 90 bp ACTTTGGGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTTCACTGGTCCCATTTTaGCAGATCAAACAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: TLGRNSHLSDGNKKIQISSLVPF*QIKQPA
Trigger: CGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGA...AGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCCCAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp TTGGGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGCCCATCAGCATCACGTTTaGCATCATCATACCGTAATG +
Preference number: 4 (lower is better)
Translates to: LGRNSHLSDGNKKIQISAHQHHV*HHHTVM
Trigger: CATTACGGTATGATGATGTCAAACGTGATGCTGATG...GGCAGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR TCA 90 bp GGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGCCTCTTGGCTGGATAGCCTATaGAGCATGTGTGTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: GRNSHLSDGNKKIQISASWLDSL*SMCVLN
Trigger: GTTTAAAACACACATGCTTCATAGGCTATCCAGCCA...AGAGGCAGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CCA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGTCCTTTATGCATGTGTaGAGTGTACTTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQSFMHV*SVLVSL
Trigger: TAAGGAAACAAGTACACTCCACACATGCATAAAGGA...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS GCA 90 bp GAGCTGCCCAGCCCGTACCGCAGTCGGGGCTCCCATGCGTGCGCGTaGCAGTCAGCTCCAGGCCCAGCTGGTCCACACACCAGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: ELPSPYRSRGSHACA*QSAPGPAGPHTSSH
Trigger: GTGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCGACTGCGGTACGGGCTGGGCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS CCA 90 bp AAGTCTCTGGTTTGCCATCGGCGGTGGAGGTGGCAGCCTGCTCCGTaGGGCAGGGGCAGGGGCCCTCGCATCGCACCGCCAGCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: KSLVCHRRWRWQPAP*GRGRGPRIAPPAAC
Trigger: GCAAGCAGCTGGCGGTGCGATGCGAGGGCCCCTGCCCCTGCCCCACGGAGCAGGCTGCCACCTCCACCGCCGATGGCAAACCAGAGACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS-3UTR CAA 90 bp GCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCCCACGGAGCTGGCTATaGGAAGCAGGTGGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: AGLLPRKRQETAAHLRWAPRSWL*EAGGRR
Trigger: CCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGG...GGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp AGGCTCCTGCGGCTGGACAGGTCGCATGTGGGGCGAAGGCGGAGATCAGCAGCCTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RLLRLDRSHVGRRRRSAASSSMK*PGVSPS
Trigger: GGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA...GGCTGCTGATCTCCGCCTTCGCCCCACATGCGACCTGTCCAGCCGCAGGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp GCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGCTGGGCCAAGCGGTTCCAGTGCTaGATCTTGCCGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: AGLLPRKRQETAAHLRWAKRFQC*ILPLYC
Trigger: GCAGTACAGCGGCAAGATCAAGCACTGGAACCGCTT...GGCCCAGCGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS GCA 90 bp AGAAGCCCACGATGTCATCGCAGTCGGGGCTCCCATGCGTGCGCGTaGCAGTCAGCTCCAGGCCCAGCTGGTCCACACACCAGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: RSPRCHRSRGSHACA*QSAPGPAGPHTSSH
Trigger: GTGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCGACTGCGATGACATCGTGGGCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS-3UTR CAA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGAGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGGVSPS*SPLASP
Trigger: AGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCC...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCTGGCCCCCAGGCTCTaGTCCAGCCCGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: KTATRRPKGPLGDSLCQELAPRL*SSPLAG
Trigger: CCCGGCCAGCGGGCTGGACAAGAGCCTGGGGGCCAG...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS CCA 90 bp GCCCGCTGGCCGGGCCGGCTACACTGCTGGCTGAGCCATTCTGCTTaGAGTTCTCATGAAGGAGCTGGAACCAGTCCCGCAGCCGATCTC +
Preference number: 5 (lower is better)
Translates to: ARWPGRLHCWLSHSA*SSHEGAGTSPAADL
Trigger: GAGATCGGCTGCGGGACTGGTTCCAGCTCCTTCATGAGAACTCCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGGCCAGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS CCA 90 bp CCCCCAGGCTCTTGTCCAGCCCGCTGGCCGGGCCGGCTACACTGCTaGCTGAGCCATTCTGCTTGGAGTTCTCATGAAGGAGCTGGAACC +
Preference number: 5 (lower is better)
Translates to: PPGSCPARWPGRLHC*LSHSAWSSHEGAGT
Trigger: GGTTCCAGCTCCTTCATGAGAACTCCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGGCCAGCGGGCTGGACAAGAGCCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS-3UTR CAA 90 bp GCGGAGATCAGCAGCCCATCGCGGGGCCCGGCCACTCAGCCTGGAGACCTGGCTTTCCAGTGCTTGATCTaGCCGCTGTACTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: AEISSPSRGPATQPGDLAFQCLI*PLYCEM
Trigger: CATCTCGCAGTACAGCGGCAAGATCAAGCACTGGAA...AGCCAGGTCTCCAGGCTGAGTGGCCGGGCCCCGCGATGGGCTGCTGATCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACGCACCGCCAGCTGCTaGCTGCTCAGGCACGCCTGT +
Preference number: 5 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGRTASC*LLRHAC
Trigger: ACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCG...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCCTGGCCCCCAGGCTCTaGTCCAGCCCGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: QGPSDCISGSVLEVACCCLAPRL*SSPLAG
Trigger: CCCGGCCAGCGGGCTGGACAAGAGCCTGGGGGCCAG...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCTGGCCCCCAGGCTCTaGTCCAGCCCGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCLAPRL*SSPLAG
Trigger: CCCGGCCAGCGGGCTGGACAAGAGCCTGGGGGCCAG...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGGGAAGGGGGAAGTGGTaGGCACCAATACAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: CCGRAAAQEAAGDCGSSAGRGKW*APIQRD
Trigger: GTCTCTCTGTATTGGTGCCAACCACTTCCCCCTTCC...CGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFGVSPS*SPLASP
Trigger: AGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCC...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCAGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: LAGGRSWSQSAERLQLSAGVSPS*SPLASP
Trigger: AGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCC...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACGCAAAGGGACAGGGCTaGCTGTGGCTGGGCGTCCTG +
Preference number: 5 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDAKGQG*LWLGVL
Trigger: CAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTGC...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTCAGAGGGTCCCCGTGTaGATGCCAACGGACCCCACC +
Preference number: 5 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVQRVPV*MPTDPT
Trigger: GGTGGGGTCCGTTGGCATCAACACGGGGACCCTCTG...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTCAGAGGGTCCCCGTGTaGATGCCAACGGACCCCACC +
Preference number: 5 (lower is better)
Translates to: ATRRPKGPLGDSLCQEQCQRVPV*MPTDPT
Trigger: GGTGGGGTCCGTTGGCATCAACACGGGGACCCTCTG...ACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS TCA 90 bp GGGCCGGCTACACTGCTGGCTGAGCCATTCTGCTTGGAGTTCTCATaGAGGAGCTGGAACCAGTCCCGCAGCCGATCTCCCAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GPATLLAEPFCLEFS*RSWNQSRSRSPRSA
Trigger: GGCTGACCTGGGAGATCGGCTGCGGGACTGGTTCCAGCTCCTTCATGAGAACTCCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS TCA 90 bp CAGGCTCTTGTCCAGCCCGCTGGCCGGGCCGGCTACACTGCTGGCTaGGCCATTCTGCTTGGAGTTCTCATGAAGGAGCTGGAACCAGTC +
Preference number: 5 (lower is better)
Translates to: QALVQPAGRAGYTAG*AILLGVLMKELEPV
Trigger: GACTGGTTCCAGCTCCTTCATGAGAACTCCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGGCCAGCGGGCTGGACAAGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS GCA 90 bp CAGTCAGCTCCAGGCCCAGCTGGTCCACACACCAGCAGTCACCGCTaGTCTGGTCACACTGCATCTTCCGGTAGTAGCCATCCTCGTCGC +
Preference number: 5 (lower is better)
Translates to: QSAPGPAGPHTSSHR*SGHTASSGSSHPRR
Trigger: GCGACGAGGATGGCTACTACCGGAAGATGCAGTGTGACCAGAGCAGCGGTGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS-3UTR CAA 90 bp TGCTGTGGCCGGGCTGCTGCCCAGGAAGCGGCAGGAGACTGCGGCTCATCTGCGGATGGACGACAGCCATaGCTCGTCCTCCATGAAATT +
Preference number: 5 (lower is better)
Translates to: CCGRAAAQEAAGDCGSSADGRQP*LVLHEI
Trigger: AATTTCATGGAGGACGAGCAATGGCTGTCGTCCATC...CGCAGATGAGCCGCAGTCTCCTGCCGCTTCCTGGGCAGCAGCCCGGCCACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCGCACCGCCAGCTGCTaGCTGCTCAGGCACGCCTGT +
Preference number: 5 (lower is better)
Translates to: KTATRRPKGPLGDSLCQERTASC*LLRHAC
Trigger: ACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCG...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGGGATGGAGGCAGGAGTaGCACCAAGGGGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTGWRQE*HQGGAR
Trigger: CCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCC...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTCCCTCCTTGAGCCCCTaGGCGTCGCCTTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CISGSVLEVACCCSELCCPSLSP*ASPSAR
Trigger: CCTGGCCGAAGGCGACGCCAAGGGGCTCAAGGAGGG...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCCCTCCTTGAGCCCCTaGGCGTCGCCTTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAPSLSP*ASPSAR
Trigger: CCTGGCCGAAGGCGACGCCAAGGGGCTCAAGGAGGG...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TTCCCTCTGACCTTCACTGGTCCCATTTTGGCAGATCAAACAGCCAGCGAGTCGGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: FPLTFTGPILADQTASESGVSPS*SPLASP
Trigger: AGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCC...CGACTCGCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAAGGTCAGAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp GTGGAACAGCATTTCCCTGAACTGAGCCGGGGCTGGAGTGGGGAGGTGAAGGACTGGGCAATGCACACCTaGTGGCGGCTGCACTTCACC +
Preference number: 5 (lower is better)
Translates to: VEQHFPELSRGWSGEVKDWAMHT*WRLHFT
Trigger: GGTGAAGTGCAGCCGCCACAAGGTGTGCATTGCCCA...GTCCTTCACCTCCCCACTCCAGCCCCGGCTCAGTTCAGGGAAATGCTGTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGATGGGCAATGCACACCTaGTGGCGGCTGCACTTCACC +
Preference number: 5 (lower is better)
Translates to: GRRGLWVTHSARSSVDQGWAMHT*WRLHFT
Trigger: GGTGAAGTGCAGCCGCCACAAGGTGTGCATTGCCCA...TCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATCGCACCGCCAGCTGCTaGCTGCTCAGGCACGCCTGT +
Preference number: 5 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHRTASC*LLRHAC
Trigger: ACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCG...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCATGCAGACCTCGTACTaGTCCAGGTTGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLMQTSY*SRLMAA
Trigger: GGCCGCCATCAACCTGGACAAGTACGAGGTCTGCAT...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGCTAGACCCAGGCTCCTaGCCTGCTGCTCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARLDPGS*PAAPGP
Trigger: AGGGCCAGGAGCAGCAGGCAAGGAGCCTGGGTCTAG...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCACTGGGGACTGCCAGGTaGGGAGCCTCACCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LAGGRSWSQSAERLQLSALGTAR*GASPRE
Trigger: CTCTCTGGGTGAGGCTCCCAACCTGGCAGTCCCCAG...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTCTGGGGACTGCCAGGTaGGGAGCCTCACCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFLGTAR*GASPRE
Trigger: CTCTCTGGGTGAGGCTCCCAACCTGGCAGTCCCCAG...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GCGGAGATCAGCAGCCCATCGCGGGGCCCGGCCACTCAGCCTGGAGACCTGGCTGGGAGAAACAGTCACTaGTCTGACGGTAACAAAAAG +
Preference number: 5 (lower is better)
Translates to: AEISSPSRGPATQPGDLAGRNSH*SDGNKK
Trigger: CTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCC...AGCCAGGTCTCCAGGCTGAGTGGCCGGGCCCCGCGATGGGCTGCTGATCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp GCTGGACATGGCCTGTGGGTGGCTCTCCCCTGGCAGGAGGAAGATCATGGTCTCCAGGGCTTCATCTCCTaGCTGATTGTCCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: AGHGLWVALPWQEEDHGLQGFIS*LIVLPA
Trigger: AGCTGGGAGGACAATCAGCAAGGAGATGAAGCCCTG...GAGACCATGATCTTCCTCCTGCCAGGGGAGAGCCACCCACAGGCCATGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CCGCCAGCCCGCAGCCTCTCGACGACCCCAGGTATCAAAGCTCAGCCATTTGTTTTCTGGCAGGGGTCCTaGGTGGTATCCAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: PPARSLSTTPGIKAQPFVFWQGS*VVSRAS
Trigger: TGAAGCCCTGGATACCACCAAGGACCCCTGCCAGAA...AACAAATGGCTGAGCTTTGATACCTGGGGTCGTCGAGAGGCTGCGGGCTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGGTGCAAGTCTCTGGTTaGCCATCGGCGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTVQVSG*PSAVEV
Trigger: CACCTCCACCGCCGATGGCAAACCAGAGACTTGCAC...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGTCGTACTTGTCCAGGTaGATGGCGGCCAGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTSYLSR*MAASSV
Trigger: GACGGAGCTGGCCGCCATCAACCTGGACAAGTACGA...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GAAAGGCAGGGCTGGATGACTCACGGGACTCTTGAGTGCCCATCAACGCACACGATGCCTGGCTTCTTCTaGGCGGCCTCCTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: ERQGWMTHGTLECPSTHTMPGFF*AASWIW
Trigger: CCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCAT...CGTGTGCGTTGATGGGCACTCAAGAGTCCCGTGAGTCATCCAGCCCTGCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGCAGACCTCAGACAGCTaGGCGAGGCACCCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGQTSDS*ARHPVP
Trigger: AGGGACAGGGTGCCTCGCCAAGCTGTCTGAGGTCTG...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS GCA 90 bp CTGGCGGAGAGTGGGTCGCGGCTGAAATGTGACCTGGTTAGGAGATaGACTTGTCTGAAAAAGCCCAGCACTGGACGCGGAGAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LAESGSRLKCDLVRR*TCLKKPSTGRGEGE
Trigger: CTCTCCCTCTCCGCGTCCAGTGCTGGGCTTTTTCAGACAAGTGCATCTCCTAACCAGGTCACATTTCAGCCGCGACCCACTCTCCGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000483699.1
CDS GCA 90 bp CAGTGCTTGATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATTaGTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: QCLILPLYCEMDDSH*SSSMKLPGVSPSLS
Trigger: GCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATCAAGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS-3UTR CAA 90 bp GGAAAGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GKKTATRRPKGPLGDSLCSSSMK*PGVSPS
Trigger: GGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA...GCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QGPSDCISGSVLEVACCCSSSMK*PGVSPS
Trigger: GGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GGAGTGTTAAGGGTCAGGGAGGAGGTGGGCACACACCCCCTTAGCCTAGACCCAAAGCGGTTCCAGTGCTaGATCTTGCCGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: GVLRVREEVGTHPLSLDPKRFQC*ILPLYC
Trigger: GCAGTACAGCGGCAAGATCAAGCACTGGAACCGCTT...TGGGTCTAGGCTAAGGGGGTGTGTGCCCACCTCCTCCCTGACCCTTAACACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACGCCATGTGGCAGGGCTaGCAGATGGAGTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHAMWQG*QMESLF
Trigger: AAACAAAGACTCCATCTGCAAGCCCTGCCACATGGC...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACGCTCAGGCACGCCTGTaGCTCCAGCTTACACACAGA +
Preference number: 5 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDAQARL*LQLTHR
Trigger: TCTGTGTGTAAGCTGGAGCAACAGGCGTGCCTGAGC...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACAGCCAATGGAGTCCTaGCAGCTGGCCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SARSSVDQGHICQRMPHTQPMES*QLAPRL
Trigger: GAGCCTGGGGGCCAGCTGCAAGGACTCCATTGGCTG...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACAGCCAATGGAGTCCTaGCAGCTGGCCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTQPMES*QLAPRL
Trigger: GAGCCTGGGGGCCAGCTGCAAGGACTCCATTGGCTG...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAGGCCGAAGGGGCCTTaGGGTGACTCACTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: HSARSSVDQGHICQRMPHRPKGP*GDSLCQ
Trigger: CTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCT...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GTGGGGATGTCACACCACATCGGCCCAGTTTTGGGAGGACCTCAGCTGGTAGACCACATCGGCCCAGTTTaGGGAGGACCTCAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: VGMSHHIGPVLGGPQLVDHIGPV*GGPQLV
Trigger: TACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTG...GTCTACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTGGTGTGACATCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATCAGACCTCAGACAGCTaGGCGAGGCACCCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHQTSDS*ARHPVP
Trigger: AGGGACAGGGTGCCTCGCCAAGCTGTCTGAGGTCTG...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS CCA 90 bp ATGCAGACCTCGTACTTGTCCAGGTTGATGGCGGCCAGCTCCGTCTaGTCCAGGAAGAGGTCAGCACTGGTGTCCAGCTTGGAGAACATC +
Preference number: 5 (lower is better)
Translates to: MQTSYLSRLMAASSV*SRKRSALVSSLENI
Trigger: GATGTTCTCCAAGCTGGACACCAGTGCTGACCTCTTCCTGGACCAGACGGAGCTGGCCGCCATCAACCTGGACAAGTACGAGGTCTGCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS CCA 90 bp TGTGGATGCACGCAGTTTAAGGAGAAAACGGGAGAGGTCATGGTGTaGCCTGCGTTGTACTGGGTGGGTCGGACGAGGGAACGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: CGCTQFKEKTGEVMV*PALYWVGRTRERLG
Trigger: TCCGAGACGTTCCCTCGTCCGACCCACCCAGTACAACGCAGGCCACACCATGACCTCTCCCGTTTTCTCCTTAAACTGCGTGCATCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412663.5
ENST00000495888.1
CDS-3UTR CAA 90 bp GTAAGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGCCCTCCTTGAGCCCCTaGGCGTCGCCTTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VSHLFSPTELAIGSRWKKPSLSP*ASPSAR
Trigger: CCTGGCCGAAGGCGACGCCAAGGGGCTCAAGGAGGG...CTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGTTCTGGCAGGGGTCCTaGGTGGTATCCAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: KTATRRPKGPLGDSLCQEFWQGS*VVSRAS
Trigger: TGAAGCCCTGGATACCACCAAGGACCCCTGCCAGAA...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GAGCAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGGGCAATGCACACCTaGTGGCGGCTGCACTTCACC +
Preference number: 5 (lower is better)
Translates to: EQGPSDCISGSVLEVACCWAMHT*WRLHFT
Trigger: GGTGAAGTGCAGCCGCCACAAGGTGTGCATTGCCCA...GCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTCTGTGCTCCAGCTTCTaGCGACTGATGCACATGGCC +
Preference number: 5 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFLCSSF*RLMHMA
Trigger: GGCCATGTGCATCAGTCGCAAGAAGCTGGAGCACAG...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACTCGTACTTGTCCAGGTaGATGGCGGCCAGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: HSARSSVDQGHICQRMPHSYLSR*MAASSV
Trigger: GACGGAGCTGGCCGCCATCAACCTGGACAAGTACGA...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGATGCAGACCTCGTACTaGTCCAGGTTGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: KTATRRPKGPLGDSLCQEMQTSY*SRLMAA
Trigger: GGCCGCCATCAACCTGGACAAGTACGAGGTCTGCAT...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGGATCCGTTCTCGAAGTaGCCTGCTGCTGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: KTATRRPKGPLGDSLCQEDPFSK*PAAAQS
Trigger: GCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATC...CTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTGATCCGTTCTCGAAGTaGCCTGCTGCTGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGDPFSK*PAAAQS
Trigger: GCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATC...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCAGGCCGAAGGGGCCTTaGGGTGACTCACTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SDCISGSVLEVACCCSELRPKGP*GDSLCQ
Trigger: CTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCT...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GAGAGCTTCTCTAGTGTTTGGGGATCCGGCAAAGGGACAGGGCTTGCTGTGGCTCACATCGGCCCAGTTTaGGGAGGACCTCAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: ESFSSVWGSGKGTGLAVAHIGPV*GGPQLV
Trigger: TACCAGCTGAGGTCCTCCCAAAACTGGGCCGATGTG...AGCCACAGCAAGCCCTGTCCCTTTGCCGGATCCCCAAACACTAGAGAAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS CCA 90 bp GAACTTGTGGATGCACGCAGTTTAAGGAGAAAACGGGAGAGGTCATaGTGTGGCCTGCGTTGTACTGGGTGGGTCGGACGAGGGAACGTC +
Preference number: 5 (lower is better)
Translates to: ELVDARSLRRKRERS*CGLRCTGWVGRGNV
Trigger: GACGTTCCCTCGTCCGACCCACCCAGTACAACGCAGGCCACACCATGACCTCTCCCGTTTTCTCCTTAAACTGCGTGCATCCACAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412663.5
ENST00000495888.1
CDS-3UTR CAA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTTCACGGTCGGCTGCTaGATCCTGTGCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RGLWVTHSARSSVDQGHIFTVGC*ILCSSF
Trigger: GAAGCTGGAGCACAGGATCAAGCAGCCGACCGTGAA...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCGCTCAGGCACGCCTGTaGCTCCAGCTTACACACAGA +
Preference number: 5 (lower is better)
Translates to: QGPSDCISGSVLEVACCCAQARL*LQLTHR
Trigger: TCTGTGTGTAAGCTGGAGCAACAGGCGTGCCTGAGC...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTGTGCAAGTCTCTGGTTaGCCATCGGCGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CISGSVLEVACCCSELCCVQVSG*PSAVEV
Trigger: CACCTCCACCGCCGATGGCAAACCAGAGACTTGCAC...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAGCCAATGGAGTCCTaGCAGCTGGCCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAQPMES*QLAPRL
Trigger: GAGCCTGGGGGCCAGCTGCAAGGACTCCATTGGCTG...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACTCGCAGGCCAGAGCTaGACCTCAGAAGCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: SARSSVDQGHICQRMPHTLAGQS*TSEARG
Trigger: CCCTCTTGCTTCTGAGGTCAAGCTCTGGCCTGCGAG...TGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACGCAAAGGGACAGGGCTaGCTGTGGCTGGGCGTCCTG +
Preference number: 5 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHAKGQG*LWLGVL
Trigger: CAGGACGCCCAGCCACAGCAAGCCCTGTCCCTTTGC...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGGATGGAGGCAGGAGTaGCACCAAGGGGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAGWRQE*HQGGAR
Trigger: CCTGGCTCCCCCTTGGTGCAACTCCTGCCTCCATCC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACTAGACCCAGGCTCCTaGCCTGCTGCTCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: GHICQRMPHTHTHTHMHALDPGS*PAAPGP
Trigger: AGGGCCAGGAGCAGCAGGCAAGGAGCCTGGGTCTAG...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTTGGGTGGCAGGCCCCTaGGTCAAGGTCACAAATCAA +
Preference number: 5 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFWVAGP*VKVTNQ
Trigger: TTGATTTGTGACCTTGACCAAGGGGCCTGCCACCCA...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS GCA 90 bp ACCGCCTATGGAGCATCTAACAATTCCTCGGCCTTCGCTAAGAACTaGTTCTGCCACAGCTGCCTGCTAAAGCCAGGTTCTGACCAGGGC +
Preference number: 5 (lower is better)
Translates to: TAYGASNNSSAFAKN*FCHSCLLKPGSDQG
Trigger: GCCCTGGTCAGAACCTGGCTTTAGCAGGCAGCTGTGGCAGAAGCAGTTCTTAGCGAAGGCCGAGGAATTGTTAGATGCTCCATAGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS CCA 90 bp AGCTGGGCCATGTGGCAGGGCTTGCAGATGGAGTCTTTGTTTCCATaGAGTTTCACGGTCGGCTGCTTGATCCTGTGCTCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SWAMWQGLQMESLFP*SFTVGCLILCSSFL
Trigger: CAAGAAGCTGGAGCACAGGATCAAGCAGCCGACCGTGAAACTCCATGGAAACAAAGACTCCATCTGCAAGCCCTGCCACATGGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTGGTTTCCAGTGCTTGATCTaGCCGCTGTACTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: VSKLSHLFSPGAEGSGFGFQCLI*PLYCEM
Trigger: CATCTCGCAGTACAGCGGCAAGATCAAGCACTGGAA...ACCAAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGTTCCAGTGCTTGATCTaGCCGCTGTACTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARFQCLI*PLYCEM
Trigger: CATCTCGCAGTACAGCGGCAAGATCAAGCACTGGAA...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAAGCGGTTCCAGTGCTaGATCTTGCCGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: HSARSSVDQGHICQRMPHKRFQC*ILPLYC
Trigger: GCAGTACAGCGGCAAGATCAAGCACTGGAACCGCTT...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATCAGGGCTTCATCTCCTaGCTGATTGTCCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHQGFIS*LIVLPA
Trigger: AGCTGGGAGGACAATCAGCAAGGAGATGAAGCCCTG...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTTCTGGCAGGGGTCCTaGGTGGTATCCAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SDCISGSVLEVACCCSELFWQGS*VVSRAS
Trigger: TGAAGCCCTGGATACCACCAAGGACCCCTGCCAGAA...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCCTGTGCTCCAGCTTCTaGCGACTGATGCACATGGCC +
Preference number: 5 (lower is better)
Translates to: SDCISGSVLEVACCCSELLCSSF*RLMHMA
Trigger: GGCCATGTGCATCAGTCGCAAGAAGCTGGAGCACAG...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCTGTGCTCCAGCTTCTaGCGACTGATGCACATGGCC +
Preference number: 5 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAALCSSF*RLMHMA
Trigger: GGCCATGTGCATCAGTCGCAAGAAGCTGGAGCACAG...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCTGCTGTTTCACGGTCGGCTGCTaGATCCTGTGCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CISGSVLEVACCCSELCCFTVGC*ILCSSF
Trigger: GAAGCTGGAGCACAGGATCAAGCAGCCGACCGTGAA...ACAGCAGAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp ACCAGGATGGCCCCCAGGTTCACACACAGGCACACGCACACACGCTGCACTCACTTGCAGATGGAGTCTTaGTTTCCATGGAGTTTCACG +
Preference number: 5 (lower is better)
Translates to: TRMAPRFTHRHTHTRCTHLQMES*FPWSFT
Trigger: CGTGAAACTCCATGGAAACAAAGACTCCATCTGCAA...GTGAGTGCAGCGTGTGTGCGTGTGCCTGTGTGTGAACCTGGGGGCCATCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGAAAACAGCTACAAGGAGGCCGAAGGGGCCTTTGGGTGACTCACTCTGCCAGGGCCATGTGGCAGGGCTaGCAGATGGAGTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: RKQLQGGRRGLWVTHSARAMWQG*QMESLF
Trigger: AAACAAAGACTCCATCTGCAAGCCCTGCCACATGGC...CCTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCTCCTTGTAGCTGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACAATGCAGACCTCGTACTaGTCCAGGTTGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTMQTSY*SRLMAA
Trigger: GGCCGCCATCAACCTGGACAAGTACGAGGTCTGCAT...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AGGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGGCCGAAGGGGCCTTaGGGTGACTCACTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: RTHLSAHATHTHTYTHACRPKGP*GDSLCQ
Trigger: CTGGCAGAGTGAGTCACCCAAAGGCCCCTTCGGCCT...GCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CAGGGCCTCTTCTCATCTGGTGAGATGAGCTCACACTGCTCAGGGGATGTTGGGAGGACTCGGAAGATGTaGATTCCAGGGCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: QGLFSSGEMSSHCSGDVGRTRKM*IPGQSE
Trigger: CTCACTCTGCCCTGGAATCAACATCTTCCGAGTCCT...CCCAACATCCCCTGAGCAGTGTGAGCTCATCTCACCAGATGAGAAGAGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTCAAAGCTCAGCCATTaGTTCTCCCCAGGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: RGLWVTHSARSSVDQGHISKLSH*FSPGAE
Trigger: CTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGA...AATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGAATGGTGTGGCCTGCGTaGTACTGGGTGGGTCGGACG +
Preference number: 5 (lower is better)
Translates to: SHLFSPTELAIGSRWKKGMVWPA*YWVGRT
Trigger: CGTCCGACCCACCCAGTACAACGCAGGCCACACCAT...TCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: THLSAHATHTHTYTHACTSSSMK*PGVSPS
Trigger: GGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGAAGCGGTTCCAGTGCTaGATCTTGCCGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: PSDCISGSVLEVACCCSEKRFQC*ILPLYC
Trigger: GCAGTACAGCGGCAAGATCAAGCACTGGAACCGCTT...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACAGGGCTTCATCTCCTaGCTGATTGTCCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: CQEQCGSRTHLSAHATHTQGFIS*LIVLPA
Trigger: AGCTGGGAGGACAATCAGCAAGGAGATGAAGCCCTG...TGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATGTGCAAGTCTCTGGTTaGCCATCGGCGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHVQVSG*PSAVEV
Trigger: CACCTCCACCGCCGATGGCAAACCAGAGACTTGCAC...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTATCGTACTTGTCCAGGTaGATGGCGGCCAGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLSYLSR*MAASSV
Trigger: GACGGAGCTGGCCGCCATCAACCTGGACAAGTACGA...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAATGCCTGGCTTCTTCTaGGCGGCCTCCTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAMPGFF*AASWIW
Trigger: CCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCAT...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AACACATGGTTAAGCTTCTTCCAGCATGGCCCTAATTCCCCTACCTGCCTAAGCCTCGCAGGCCAGAGCTaGACCTCAGAAGCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: NTWLSFFQHGPNSPTCLSLAGQS*TSEARG
Trigger: CCCTCTTGCTTCTGAGGTCAAGCTCTGGCCTGCGAG...GCTTAGGCAGGTAGGGGAATTAGGGCCATGCTGGAAGAAGCTTAACCATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CTGGCAGGAGGAAGATCATGGTCTCAGAGTGCGGAAAGGCTGCAGCTTTCGGCACCCTCCAAAGTGAAGTaGGAAGCAGGTGAAGCTCAT +
Preference number: 5 (lower is better)
Translates to: LAGGRSWSQSAERLQLSAPSKVK*EAGEAH
Trigger: ATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGG...TGCCGAAAGCTGCAGCCTTTCCGCACTCTGAGACCATGATCTTCCTCCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACAGGCTGGAAAGCAGTTaGCTCTGCTGGGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: HSARSSVDQGHICQRMPHRLESS*LCWELP
Trigger: AGGAAGTTCCCAGCAGAGCAAACTGCTTTCCAGCCT...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp ACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACATTCCAGTGCTTGATCTaGCCGCTGTACTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: TLPGAVWIKDTFVSACHTFQCLI*PLYCEM
Trigger: CATCTCGCAGTACAGCGGCAAGATCAAGCACTGGAA...TGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTGCCATGTGGCAGGGCTaGCAGATGGAGTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAAMWQG*QMESLF
Trigger: AAACAAAGACTCCATCTGCAAGCCCTGCCACATGGC...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATGCTCAGGCACGCCTGTaGCTCCAGCTTACACACAGA +
Preference number: 5 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHAQARL*LQLTHR
Trigger: TCTGTGTGTAAGCTGGAGCAACAGGCGTGCCTGAGC...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAATGCCTGGCTTCTTCTaGGCGGCCTCCTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: THLSAHATHTHTYTHACTMPGFF*AASWIW
Trigger: CCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCAT...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATGATCCGTTCTCGAAGTaGCCTGCTGCTGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHDPFSK*PAAAQS
Trigger: GCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATC...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCAGCAGACAGGGGTCGGTaGAGCCAGGGTAGAAACCAA +
Preference number: 5 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAADRGR*SQGRNQ
Trigger: TTGGTTTCTACCCTGGCTCAACCGACCCCTGTCTGC...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATACACGCAGACAGGGGTCGGTaGAGCCAGGGTAGAAACCAA +
Preference number: 5 (lower is better)
Translates to: VWIKDTFVSACHTHTHIHADRGR*SQGRNQ
Trigger: TTGGTTTCTACCCTGGCTCAACCGACCCCTGTCTGC...GTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCAGGACTCGGAAGATGTaGATTCCAGGGCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: SDCISGSVLEVACCCSELRTRKM*IPGQSE
Trigger: CTCACTCTGCCCTGGAATCAACATCTTCCGAGTCCT...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGAGGCTGGAAAGCAGTTaGCTCTGCTGGGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: PSDCISGSVLEVACCCSERLESS*LCWELP
Trigger: AGGAAGTTCCCAGCAGAGCAAACTGCTTTCCAGCCT...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS GCA 90 bp TATGGAGCATCTAACAATTCCTCGGCCTTCGCTAAGAACTGCTTCTaGCACAGCTGCCTGCTAAAGCCAGGTTCTGACCAGGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: YGASNNSSAFAKNCF*HSCLLKPGSDQGLF
Trigger: GAAAAGGCCCTGGTCAGAACCTGGCTTTAGCAGGCAGCTGTGGCAGAAGCAGTTCTTAGCGAAGGCCGAGGAATTGTTAGATGCTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS-3UTR CAA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGGATGGACGACAGCCATaGCTCGTCCTCCATGAAATT +
Preference number: 5 (lower is better)
Translates to: PSDCISGSVLEVACCCSEDGRQP*LVLHEI
Trigger: AATTTCATGGAGGACGAGCAATGGCTGTCGTCCATC...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp GGACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCATGGGTGGCAGGCCCCTaGGTCAAGGTCACAAATCAA +
Preference number: 5 (lower is better)
Translates to: GHICQRMPHTHTHTHMHAWVAGP*VKVTNQ
Trigger: TTGATTTGTGACCTTGACCAAGGGGCCTGCCACCCA...TGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCCCTCCAAAGTGAAGTaGGAAGCAGGTGAAGCTCAT +
Preference number: 5 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAPSKVK*EAGEAH
Trigger: ATGAGCTTCACCTGCTTCCAACTTCACTTTGGAGGG...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AAGGGGCCTTTGGGTGACTCACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGCAGATGGAGTCTTaGTTTCCATGGAGTTTCACG +
Preference number: 5 (lower is better)
Translates to: KGPLGDSLCQEQCGSRTHLQMES*FPWSFT
Trigger: CGTGAAACTCCATGGAAACAAAGACTCCATCTGCAA...ATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTGAGTCACCCAAAGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACTGTTTTGTCTACCTTTaGAGGGGACCAGTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: HSARSSVDQGHICQRMPHCFVYL*RGPVSV
Trigger: TACTGAGACTGGTCCCCTCAAAAGGTAGACAAAACA...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATCAAAGCTCAGCCATTaGTTCTCCCCAGGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: THLSAHATHTHTYTHACTSKLSH*FSPGAE
Trigger: CTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGA...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CAGGTATCAAAGCTCAGCCATTTGTTCTCCCCAGGGGCTGAGGGCTCGGGCTTTCGGAAATCCAAGCACTaGAACACAATTCCTAACTCT +
Preference number: 5 (lower is better)
Translates to: QVSKLSHLFSPGAEGSGFRKSKH*NTIPNS
Trigger: AGAGTTAGGAATTGTGTTCAAGTGCTTGGATTTCCG...AAAGCCCGAGCCCTCAGCCCCTGGGGAGAACAAATGGCTGAGCTTTGATACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GTCATTTATTCTCACCCACGGAGCTGGCTATTGGAAGCAGGTGGAAGAAGGGAGTTCACTGGTCCCATTTaGGCAGATCAAACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: VIYSHPRSWLLEAGGRREFTGPI*ADQTAS
Trigger: GCTGGCTGTTTGATCTGCCAAAATGGGACCAGTGAA...CTCCCTTCTTCCACCTGCTTCCAATAGCCAGCTCCGTGGGTGAGAATAAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS-3UTR CAA 90 bp AGGACCAAGCAAGCAAGAAACCGTTCTTTGAACACATGGTTAAGCTTCTTCCAGTTCACGGTCGGCTGCTaGATCCTGTGCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RTKQARNRSLNTWLSFFQFTVGC*ILCSSF
Trigger: GAAGCTGGAGCACAGGATCAAGCAGCCGACCGTGAA...CTGGAAGAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGCTTGCTTGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACTCTCACTTTTCCACATaGCAGGCTTCAAAACAGAGC +
Preference number: 5 (lower is better)
Translates to: GAVWIKDTFVSACHTHTHSHFST*QASKQS
Trigger: GCTCTGTTTTGAAGCCTGCAATGTGGAAAAGTGAGA...GTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGTGTTTTGTCTACCTTTaGAGGGGACCAGTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: PSDCISGSVLEVACCCSECFVYL*RGPVSV
Trigger: TACTGAGACTGGTCCCCTCAAAAGGTAGACAAAACA...CTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp CAGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCGCAAGAAACCGTTCTTaGAACACATGGTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QGPSDCISGSVLEVACCCARNRS*NTWLSF
Trigger: GAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGC...GCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGGGTCCTTCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTGCATCAGCATCACGTTaGACATCATCATACCGTAAT +
Preference number: 5 (lower is better)
Translates to: RVLLTAFLDPFSKLPAAAASASR*TSSYRN
Trigger: ATTACGGTATGATGATGTCAAACGTGATGCTGATGC...AGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGAAGGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317376.8
CDS-3UTR CAA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACAGATGGACGACAGCCATaGCTCGTCCTCCATGAAATT +
Preference number: 5 (lower is better)
Translates to: THLSAHATHTHTYTHACTDGRQP*LVLHEI
Trigger: AATTTCATGGAGGACGAGCAATGGCTGTCGTCCATC...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp CACTCTGCCAGGAGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACGAGGAAACCTTAACCTaGTCTAACAAAAAGCCACTT +
Preference number: 5 (lower is better)
Translates to: HSARSSVDQGHICQRMPHEETLT*SNKKPL
Trigger: AAGTGGCTTTTTGTTAGACAAGGTTAAGGTTTCCTC...GTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCTCCTGGCAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp AGCAGTGTGGATCAAGGACACATTTGTCAGCGCATGCCACACACACACACACATTCTCACTTTTCCACATaGCAGGCTTCAAAACAGAGC +
Preference number: 5 (lower is better)
Translates to: SSVDQGHICQRMPHTHTHSHFST*QASKQS
Trigger: GCTCTGTTTTGAAGCCTGCAATGTGGAAAAGTGAGA...ATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTCCTTGATCCACACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp TCTGACTGCATTTCTGGATCCGTTCTCGAAGTTGCCTGCTGCTGCTCAGAGCTCGAGGAAACCTTAACCTaGTCTAACAAAAAGCCACTT +
Preference number: 5 (lower is better)
Translates to: SDCISGSVLEVACCCSELEETLT*SNKKPL
Trigger: AAGTGGCTTTTTGTTAGACAAGGTTAAGGTTTCCTC...GAGCTCTGAGCAGCAGCAGGCAACTTCGAGAACGGATCCAGAAATGCAGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp ACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACATTGCAGATGGAGTCTTaGTTTCCATGGAGTTTCACG +
Preference number: 5 (lower is better)
Translates to: THLSAHATHTHTYTHACTLQMES*FPWSFT
Trigger: CGTGAAACTCCATGGAAACAAAGACTCCATCTGCAA...TGTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS-3UTR CAA 90 bp TTCCTTCTCCATCACCCTTGGACCCTCTCTGAGTGGTCTCTCAAGGCACATTTAGCAAGAAACCGTTCTTaGAACACATGGTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FLLHHPWTLSEWSLKAHLARNRS*NTWLSF
Trigger: GAAGCTTAACCATGTGTTCAAAGAACGGTTTCTTGC...TAAATGTGCCTTGAGAGACCACTCAGAGAGGGTCCAAGGGTGATGGAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp GACACATTTGTCAGCGCATGCCACACACACACACACATACACACATGCATGCACCGGAAATCCAAGCACTaGAACACAATTCCTAACTCT +
Preference number: 5 (lower is better)
Translates to: DTFVSACHTHTHIHTCMHRKSKH*NTIPNS
Trigger: AGAGTTAGGAATTGTGTTCAAGTGCTTGGATTTCCG...GTGCATGCATGTGTGTATGTGTGTGTGTGTGTGGCATGCGCTGACAAATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS-3UTR CAA 90 bp ACTTTGGGGAGAAACAGTCACTTGTCTGACGGTAACAAAAAGATCCAAATCTCTGCATCAGCATCACGTTaGACATCATCATACCGTAAT +
Preference number: 5 (lower is better)
Translates to: TLGRNSHLSDGNKKIQISASASR*TSSYRN
Trigger: ATTACGGTATGATGATGTCAAACGTGATGCTGATGC...AGAGATTTGGATCTTTTTGTTACCGTCAGACAAGTGACTGTTTCTCCCCAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412663.5
CDS GCA 72 bp CGTCTACCAGATGTAGCCCCCGTCGTCAGCCTCGCCTaGCTCGCCCTCCTCCTCCTCGGCCTCCTCGCCTGC +
Preference number: 6 (lower is better)
Translates to: RLPDVAPVVSLA*LALLLLGLLAC
Trigger: GCAGGCGAGGAGGCCGAGGAGGAGGAGGGCGAGGCAGGCGAGGCTGACGACGGGGGCTACATCTGGTAGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS GCA 72 bp AGCCCGTACCGCAGTCGGGGCTCCCATGCGTGCGCGTaGCAGTCAGCTCCAGGCCCAGCTGGTCCACACACC +
Preference number: 6 (lower is better)
Translates to: SPYRSRGSHACA*QSAPGPAGPHT
Trigger: GGTGTGTGGACCAGCTGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCGACTGCGGTACGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS CAA 72 bp ATGAAATTGCCGGGGGTCTCGCCCTCCTTGAGCCCCTaGGCGTCGCCTTCGGCCAGGGCTGCCGCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: MKLPGVSPSLSP*ASPSARAAAAR
Trigger: CCTGGCCGCGGCAGCCCTGGCCGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS CAA 90 bp TCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTTGAGCCCCTaGGCGTCGCCTTCGGCCAGGGCTGCCGCGGCCAGGAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSSMKLPGVSPSLSP*ASPSARAAAARSSS
Trigger: GCTGCTGCTCCTGGCCGCGGCAGCCCTGGCCGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS CAA 90 bp AGCCATTGCTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCTTCGGCCAGGGCTGCCGCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SHCSSSMKLPGVSPS*SPLASPSARAAAAR
Trigger: CCTGGCCGCGGCAGCCCTGGCCGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS GCA 72 bp GGGCAGGGGCAGGGGCCCTCGCATCGCACCGCCAGCTaGTTGCTGCTCAGGCACGCCTGTTGCTCCAGCTTA +
Preference number: 6 (lower is better)
Translates to: GQGQGPSHRTAS*LLLRHACCSSL
Trigger: TAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGATGCGAGGGCCCCTGCCCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS GCA 72 bp CGATGTCATCGCAGTCGGGGCTCCCATGCGTGCGCGTaGCAGTCAGCTCCAGGCCCAGCTGGTCCACACACC +
Preference number: 6 (lower is better)
Translates to: RCHRSRGSHACA*QSAPGPAGPHT
Trigger: GGTGTGTGGACCAGCTGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCGACTGCGATGACATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS GCA 72 bp GAGAAGCCCACGATGTCATCGCAGTCGGGGCTCCCATaGGTGCGCGTGCCAGTCAGCTCCAGGCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: EKPTMSSQSGLP*VRVPVSSRPSW
Trigger: CCAGCTGGGCCTGGAGCTGACTGGCACGCGCACGCATGGGAGCCCCGACTGCGATGACATCGTGGGCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS GCA 72 bp AGGGGCAGGGGCCCTCGCATCGCACCGCCAGCTGCTTaGTGCTCAGGCACGCCTGTTGCTCCAGCTTACACC +
Preference number: 6 (lower is better)
Translates to: RGRGPRIAPPAA*CSGTPVAPAYT
Trigger: GGTGTAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGATGCGAGGGCCCCTGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS CAA 72 bp TCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTaGAGCCCCTTGGCGTCGCCTTCGGCCAGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSSMKLPGVSPS*SPLASPSARAA
Trigger: GGCAGCCCTGGCCGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS GCA 72 bp AGGGGCAGGGGCCCTCGCATCGCACCGCCAGCTGCTTaGTGCTCAGGCACGCCTGTTGCTCCAGCTTACACA +
Preference number: 6 (lower is better)
Translates to: RGRGPRIAPPAA*CSGTPVAPAYT
Trigger: TGTGTAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGATGCGAGGGCCCCTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS GCA 72 bp AGGGGCAGGGGCCCTCGCATCGCACCGCCAGCTGCTTaGTGCTCAGGCACGCCTGTTGCTCCAGCTTACACT +
Preference number: 6 (lower is better)
Translates to: RGRGPRIAPPAA*CSGTPVAPAYT
Trigger: AGTGTAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGATGCGAGGGCCCCTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463279.6
ENST00000469121.5
CDS TCA 72 bp CAGTCCCGCAGCCGATCTCCCAGGTCAGCCAGGTCCTaGCCGGTGCAAGTCTCTGGTTTGCCATCGGCGGTG +
Preference number: 6 (lower is better)
Translates to: QSRSRSPRSARS*PVQVSGLPSAV
Trigger: CACCGCCGATGGCAAACCAGAGACTTGCACCGGTCAGGACCTGGCTGACCTGGGAGATCGGCTGCGGGACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS TCA 72 bp GTCCAGCCCGCTGGCCGGGCCGGCTACACTGCTGGCTaGGCCATTCTGCTTGGAGTTCTCATGAAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: VQPAGRAGYTAG*AILLGVLMKEL
Trigger: CAGCTCCTTCATGAGAACTCCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGGCCAGCGGGCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS CCA 72 bp GGGATGAAGATGCCTGGCTTCTTCTTGGCGGCCTCCTaGATCTGGATGCGCTCCAGCTCTGCCAGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: GMKMPGFFLAAS*IWMRSSSARQG
Trigger: CCCCTGCCTGGCAGAGCTGGAGCGCATCCAGATCCAGGAGGCCGCCAAGAAGAAGCCAGGCATCTTCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS CAA 90 bp CTGTACTGCGAGATGGACGACAGCCATTGCTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCCTTGAGCCCCTTGGCGTCGCCTTCG +
Preference number: 6 (lower is better)
Translates to: LYCEMDDSHCSSSMK*PGVSPSLSPLASPS
Trigger: CGAAGGCGACGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS GCA 72 bp GGCTCTTGTCCAGCCCGCTGGCCGGGCCGGCTACACTaGTGGCTGAGCCATTCTGCTTGGAGTTCTCATGAA +
Preference number: 6 (lower is better)
Translates to: GSCPARWPGRLH*WLSHSAWSSHE
Trigger: TTCATGAGAACTCCAAGCAGAATGGCTCAGCCAGCAGTGTAGCCGGCCCGGCCAGCGGGCTGGACAAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS CAA 72 bp GAGATGGACGACAGCCATTGCTCGTCCTCCATGAAATaGCCGGGGGTCTCGCCCTCCTTGAGCCCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: EMDDSHCSSSMK*PGVSPSLSPLA
Trigger: CGCCAAGGGGCTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS GCA 72 bp CCAGGCCCAGCTGGTCCACACACCAGCAGTCACCGCTaGTCTGGTCACACTGCATCTTCCGGTAGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: PGPAGPHTSSHR*SGHTASSGSSH
Trigger: ATGGCTACTACCGGAAGATGCAGTGTGACCAGAGCAGCGGTGACTGCTGGTGTGTGGACCAGCTGGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS CCA 72 bp TGCAGTATTTTAATGTCCTTCCTCCCACCCCGCTGCTaGCGAAGCGCACGCGGCTGTCCTCAGCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: CSILMSFLPPRC*RSARGCPQLSS
Trigger: GGAGGAGAGCTGAGGACAGCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAGGAAGGACATTAAAATACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000483699.1
ENST00000495888.1
ENST00000536168.2
CDS CCA 72 bp AAAACGGGAGAGGTCATGGTGTGGCCTGCGTTGTACTaGGTGGGTCGGACGAGGGAACGTCTCGGAAGCGGT +
Preference number: 6 (lower is better)
Translates to: KTGEVMVWPALY*VGRTRERLGSG
Trigger: ACCGCTTCCGAGACGTTCCCTCGTCCGACCCACCCAGTACAACGCAGGCCACACCATGACCTCTCCCGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412663.5
ENST00000495888.1
CDS CAA 72 bp TCGCACCGCCAGCTGCTTGCTGCTCAGGCACGCCTGTaGCTCCAGCTTACACACAGAGCTGTAAGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: SHRQLLAAQARL*LQLTHRAVSVA
Trigger: GGCCACACTTACAGCTCTGTGTGTAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS CAA 72 bp TCGCACCGCCAGCTGCTTGCTGCTCAGGCACGCCTGTaGCTCCAGCTTACACTCCTAAATGCAGCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SHRQLLAAQARL*LQLTLLNAASA
Trigger: GGCAGAGGCTGCATTTAGGAGTGTAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463279.6
CDS GCA 72 bp TTCTGCAGTATTTTAATGTCCTTCCTCCCACCCCGCTaGTGGCGAAGCGCACGCGGCTGTCCTCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: FCSILMSFLPPR*WRSARGCPQLS
Trigger: GGAGAGCTGAGGACAGCCGCGTGCGCTTCGCCAGCAGCGGGGTGGGAGGAAGGACATTAAAATACTGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000483699.1
ENST00000495888.1
ENST00000536168.2
CDS GCA 72 bp ATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATTaGTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: ILPLYCEMDDSH*SSSMKLPGVSP
Trigger: GGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS GCA 72 bp CGCACCGCCAGCTGCTTGCTGCTCAGGCACGCCTGTTaGTCCAGCTTACACCCAGTGGACTTTTCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: RTASCLLLRHAC*SSLHPVDFSQF
Trigger: GAACTGAGAAAAGTCCACTGGGTGTAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS CAA 72 bp GATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATaGCTCGTCCTCCATGAAATTGCCGGGGGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: DLAAVLRDGRQP*LVLHEIAGGLA
Trigger: GGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS CAA 72 bp CAGGAGTTGAAGAAGGGACGGATGCAGACCTCGTACTaGTCCAGGTTGATGGCGGCCAGCTCCGTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: QELKKGRMQTSY*SRLMAASSVWS
Trigger: GGACCAGACGGAGCTGGCCGCCATCAACCTGGACAAGTACGAGGTCTGCATCCGTCCCTTCTTCAACTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000460053.1
ENST00000463279.6
ENST00000469121.5
ENST00000536168.2
CDS CAA 72 bp AAGGAGAAAACGGGAGAGGTCATGGTGTGGCCTGCGTaGTACTGGGTGGGTCGGACGAGGGAACGTCTCGGA +
Preference number: 6 (lower is better)
Translates to: KEKTGEVMVWPA*YWVGRTRERLG
Trigger: TCCGAGACGTTCCCTCGTCCGACCCACCCAGTACAACGCAGGCCACACCATGACCTCTCCCGTTTTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412663.5
ENST00000495888.1
CDS CAA 90 bp CCAGTGCTTGATCTTGCCGCTGTACTGCGAGATGGACGACAGCCATaGCTCGTCCTCCATGAAATTGCCGGGGGTCTCGCCCTCCTTGAG +
Preference number: 6 (lower is better)
Translates to: PVLDLAAVLRDGRQP*LVLHEIAGGLALLE
Trigger: CTCAAGGAGGGCGAGACCCCCGGCAATTTCATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATCAAGCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS CAA 90 bp ACGCAGTTTAAGGAGAAAACGGGAGAGGTCATGGTGTGGCCTGCGTaGTACTGGGTGGGTCGGACGAGGGAACGTCTCGGAAGCGGTTCC +
Preference number: 6 (lower is better)
Translates to: TQFKEKTGEVMVWPA*YWVGRTRERLGSGS
Trigger: GGAACCGCTTCCGAGACGTTCCCTCGTCCGACCCACCCAGTACAACGCAGGCCACACCATGACCTCTCCCGTTTTCTCCTTAAACTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412663.5
ENST00000495888.1
CDS GCA 72 bp CGGAAGCGGTTCCAGTGCTTGATCTTGCCGCTGTACTaGGAGATGGACGACAGCCATTGCTCGTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: RKRFQCLILPLY*EMDDSHCSSSM
Trigger: CATGGAGGACGAGCAATGGCTGTCGTCCATCTCGCAGTACAGCGGCAAGATCAAGCACTGGAACCGCTTCCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000495888.1
ENST00000536168.2
CDS CAA 72 bp TCGCACCGCCAGCTGCTTGCTGCTCAGGCACGCCTGTaGCTCCAGCTTACACCCAGTGGACTTTTCTCAGTT +
Preference number: 6 (lower is better)
Translates to: SHRQLLAAQARL*LQLTPSGLFSV
Trigger: AACTGAGAAAAGTCCACTGGGTGTAAGCTGGAGCAACAGGCGTGCCTGAGCAGCAAGCAGCTGGCGGTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS CCA 72 bp ACGCAGTTTAAGGAGAAAACGGGAGAGGTCATGGTGTaGCCTGCGTTGTACTGGGTGGGTCGGACGAGGGAA +
Preference number: 6 (lower is better)
Translates to: TQFKEKTGEVMV*PALYWVGRTRE
Trigger: TTCCCTCGTCCGACCCACCCAGTACAACGCAGGCCACACCATGACCTCTCCCGTTTTCTCCTTAAACTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412663.5
ENST00000495888.1
CDS CCA 72 bp GATGCACGCAGTTTAAGGAGAAAACGGGAGAGGTCATaGTGTGGCCTGCGTTGTACTGGGTGGGTCGGACGA +
Preference number: 6 (lower is better)
Translates to: DARSLRRKRERS*CGLRCTGWVGR
Trigger: TCGTCCGACCCACCCAGTACAACGCAGGCCACACCATGACCTCTCCCGTTTTCTCCTTAAACTGCGTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412663.5
ENST00000495888.1
CDS CAA 72 bp TCATCCTCCACTTCGTCTCGGAAGCGGTTCCAGTGCTaGATCTTGCCGCTGTACTGCGAGATGGACGACAGC +
Preference number: 6 (lower is better)
Translates to: SSSTSSRKRFQC*ILPLYCEMDDS
Trigger: GCTGTCGTCCATCTCGCAGTACAGCGGCAAGATCAAGCACTGGAACCGCTTCCGAGACGAAGTGGAGGATGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317376.8
ENST00000373109.7
CDS GCA 72 bp AGTGGGTCGCGGCTGAAATGTGACCTGGTTAGGAGATaGACTTGTCTGAAAAAGCCCAGCACTGGACGCGGA +
Preference number: 6 (lower is better)
Translates to: SGSRLKCDLVRR*TCLKKPSTGRG
Trigger: TCCGCGTCCAGTGCTGGGCTTTTTCAGACAAGTGCATCTCCTAACCAGGTCACATTTCAGCCGCGACCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000412663.5
ENST00000483699.1
CDS CCA 72 bp ATGTGGCAGGGCTTGCAGATGGAGTCTTTGTTTCCATaGAGTTTCACGGTCGGCTGCTTGATCCTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: MWQGLQMESLFP*SFTVGCLILCS
Trigger: GGAGCACAGGATCAAGCAGCCGACCGTGAAACTCCATGGAAACAAAGACTCCATCTGCAAGCCCTGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317376.8
ENST00000373109.7
ENST00000536168.2
CDS GCA 72 bp TCTAACAATTCCTCGGCCTTCGCTAAGAACTGCTTCTaGCACAGCTGCCTGCTAAAGCCAGGTTCTGACCAG +
Preference number: 6 (lower is better)
Translates to: SNNSSAFAKNCF*HSCLLKPGSDQ
Trigger: CTGGTCAGAACCTGGCTTTAGCAGGCAGCTGTGGCAGAAGCAGTTCTTAGCGAAGGCCGAGGAATTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460053.1
CDS GCA 72 bp GGAGCATCTAACAATTCCTCGGCCTTCGCTAAGAACTaGTTCTGCCACAGCTGCCTGCTAAAGCCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: GASNNSSAFAKN*FCHSCLLKPGS
Trigger: AGAACCTGGCTTTAGCAGGCAGCTGTGGCAGAAGCAGTTCTTAGCGAAGGCCGAGGAATTGTTAGATGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460053.1