RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPOCD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134668

Ensembl transcript IDs: ENST00000257100.7, ENST00000360482.6, ENST00000452755.6, ENST00000460061.5, ENST00000468720.5, ENST00000473361.5, ENST00000485944.5, ENST00000525930.1, ENST00000528579.1, ENST00000528791.5, ENST00000529396.1, ENST00000531039.5, ENST00000532604.5, ENST00000533231.5

Found 773 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTaGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTG +
Preference number: 1 (lower is better)
Translates to: NQQQTLSNRKFKQGR*VGLTILSLQSHLSL
Trigger: CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
3UTR CAA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTaGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGG +
Preference number: 2 (lower is better)
Translates to: RKFKQGRWVGLTILS*QSHLSLEQASTLVR
Trigger: CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
3UTR CCA 72 bp CAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTaGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCAC +
Preference number: 3 (lower is better)
Translates to: QTLSNRKFKQGR*VGLTILSLQSH
Trigger: GTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGGACTGGCGCAAGCCTaGCTCTGGGGGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLGLAQA*LWGPLP
Trigger: GGGCAGTGGCCCCCAGAGCCAGGCTTGCGCCAGTCC...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGGAGGGGATGCAGCCTaGCGAGCGGATCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLGGDAA*RADHGG
Trigger: CCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCC...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCCAGCGGGCCAGCTCCTaGGGGGCCAGCTGCATCGAG +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLQRASS*GASCIE
Trigger: CTCGATGCAGCTGGCCCCCCAGGAGCTGGCCCGCTG...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGTCCCGAGACCAGCTaGGCCCTGGCCCGGAACCGC +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLCPETS*ALARNR
Trigger: GCGGTTCCGGGCCAGGGCCCAGCTGGTCTCGGGACA...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGACTGGCGCAAGCCTaGCTCTGGGGGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSGLAQA*LWGPLP
Trigger: GGGCAGTGGCCCCCAGAGCCAGGCTTGCGCCAGTCC...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCCCCCGTGGTGTCCTCTaGTGCGATGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLPRGVL*CDGQGL
Trigger: CAGGCCCTGCCCATCGCATCAGAGGACACCACGGGG...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCCCCCTTTTCTCCTCCTaGTCCCGCCAGCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLPLFSS*SRQRAS
Trigger: GCTGGCCCGCTGGCGGGACCAGGAGGAGAAAAGGGG...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGGGACTCCCCTCCACTaGGCACTGGGAACCCGACAG +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLGTPLH*ALGTRQ
Trigger: CTGTCGGGTTCCCAGTGCCCAGTGGAGGGGAGTCCC...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGTCTGGGGCAGCCTCCTaGGCTGGGTTCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLSGAAS*AGFLWP
Trigger: AGGCCAGAGGAACCCAGCCCAGGAGGCTGCCCCAGA...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCGTCAGAGCTCTCCCCTaGGTAGGCACCGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLVRALP*VGTEGS
Trigger: GCTGCCCTCGGTGCCTACTCAGGGGAGAGCTCTGAC...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGCCACTCTGGGAACATaGAGGGTCCGAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLATLGT*RVRAGV
Trigger: GACCCCAGCTCGGACCCTGCATGTTCCCAGAGTGGC...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGACCTCAGCAGCACCTaGAGCCCGGGAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSDLSST*SPGAAT
Trigger: GGTGGCAGCTCCCGGGCTGCAGGTGCTGCTGAGGTC...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTATGCAGGGTCCGAGCTaGGGTCGCCAAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSMQGPS*GRQGPG
Trigger: CCCTGGCCCTTGGCGACCCCAGCTCGGACCCTGCAT...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCAGCGGGCCAGCTCCTaGGGGGCCAGCTGCATCGAG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSQRASS*GASCIE
Trigger: CTCGATGCAGCTGGCCCCCCAGGAGCTGGCCCGCTG...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCCCCTTTTCTCCTCCTaGTCCCGCCAGCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLPLFSS*SRQRAS
Trigger: GCTGGCCCGCTGGCGGGACCAGGAGGAGAAAAGGGG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCAGAGGGCGGGGGATaGAGCTCTTGGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTAEGGG*SSWSGG
Trigger: GCCCCCAGACCAAGAGCTCCATCCCCCGCCCTCTGC...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAAGAGGAGTCACGGGCTaGGCCAGGGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTRGVTG*ARGLWS
Trigger: GCTCCAGAGCCCCCTGGCCCAGCCCGTGACTCCTCT...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGTCAGAGCTCTCCCCTaGGTAGGCACCGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSVRALP*VGTEGS
Trigger: GCTGCCCTCGGTGCCTACTCAGGGGAGAGCTCTGAC...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGGCAGGGCGGGGGCACTaGGCCCAGGAGGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRAGRGH*AQEALQ
Trigger: CTGGAGAGCCTCCTGGGCTCAGTGCCCCCGCCCTGC...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS-3UTR GCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCGGAGGGGATGCAGCCTaGCGAGCGGATCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGGGDAA*RADHGG
Trigger: CCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCC...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGCCTCGCCCAGGATGCTaGCAGTTTTCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLPRPGC*QFSGSG
Trigger: GCCAGAGCCTGAAAACTGGCAGCATCCTGGGCGAGG...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCCAGGGATTCGAGGTaGCGGAGCAGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQARDSR*RSRAWW
Trigger: CCACCAAGCCCTGCTCCGGCACCTCGAATCCCTGGC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAATGGCCCCCAGGAGCTaGATCACTGGCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTMAPRS*ITGPEP
Trigger: GGGTTCCGGGCCAGTGATCCAGCTCCTGGGGGCCAT...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCATGCAGGGTCCGAGCTaGGGTCGCCAAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSMQGPS*GRQGPG
Trigger: CCCTGGCCCTTGGCGACCCCAGCTCGGACCCTGCAT...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGGTCATGCTGCCCCGTaGTGTCCTCTGATGCGATGG +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLGHAAP*CPLMRW
Trigger: CCATCGCATCAGAGGACACCACGGGGCAGCATGACC...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGACGGTGGGCAGAGCCTaGACAAGCCGACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLTVGRA*TSRQLC
Trigger: ACACAGCTGTCGGCTTGTCCAGGCTCTGCCCACCGT...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGTCCCGGGCCCCATGTaGGCACAGTCTGACCACGCA +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQVPGPM*AQSDHA
Trigger: TGCGTGGTCAGACTGTGCCCACATGGGGCCCGGGAC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACATGCCGGAGCAGGGCTTaGTGGGGACAGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTCRSRA*WGQESL
Trigger: CAGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCA...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTGGGCCAGGGGGCTCTaGAGCTGCAAGGGCGCTAGA +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLWARGL*SCKGAR
Trigger: TCTAGCGCCCTTGCAGCTCCAGAGCCCCCTGGCCCA...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACACAGCTCCAAGACCCCTaGCCGGACCTCAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTQLQDP*PDLSST
Trigger: GGTGCTGCTGAGGTCCGGCCAGGGGTCTTGGAGCTG...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCATGTGGGCACAGTCTaGCCACGCAGACGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSHVGTV*PRRRPW
Trigger: CCAAGGACGTCTGCGTGGTCAGACTGTGCCCACATG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCTCCCGGCCCATCTGGTaGCAGGCCTGGCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVSRPIW*QAWHGA
Trigger: AGCTCCATGCCAGGCCTGTCACCAGATGGGCCGGGA...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR TCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCTCCCGGCCCATCTGGTaGCAGGCCTGGCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGSRPIW*QAWHGA
Trigger: AGCTCCATGCCAGGCCTGTCACCAGATGGGCCGGGA...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGTCCCCACGAGGGCTCTaGTCAAGCCACAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLSPRGL*SSHRKS
Trigger: TGACTTCCTGTGGCTTGATCAGAGCCCTCGTGGGGA...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCCAGGGGCTGGACCCTaGTGTGTCTGGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLPGAGP*CVWKPF
Trigger: GAAGGGCTTCCAGACACAGCAGGGTCCAGCCCCTGG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCGAGCTATACTGCCCCTaGCCTGGCTCTGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLELYCP*PGSAAR
Trigger: CCTGGCAGCAGAGCCAGGGCAGGGGCAGTATAGCTC...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCACAGGGTCTCCTGTaGTGGGGCCTTCTACGTCCC +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQAQGLL*WGLLRP
Trigger: GGGACGTAGAAGGCCCCAGCACAGGAGACCCTGTGC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCGCACAGGGTCTCCTGTaGTGGGGCCTTCTACGTCCC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLAQGLL*WGLLRP
Trigger: GGGACGTAGAAGGCCCCAGCACAGGAGACCCTGTGC...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCTGCAGCCCGGGAGCTaGCACCTCGAAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGILQPGS*HLEGPP
Trigger: AGGAGGCCCTTCGAGGTGGCAGCTCCCGGGCTGCAG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGGCCTGAGCAGGCCCTaGTGGCTTCAGTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSGLSRP*WLQYPG
Trigger: CCCTGGATACTGAAGCCAGCAGGGCCTGCTCAGGCC...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCATGGCCCCCAGGAGCTaGATCACTGGCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVMAPRS*ITGPEP
Trigger: GGGTTCCGGGCCAGTGATCCAGCTCCTGGGGGCCAT...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCCCCCTGCCTGGCCGTaGCTGATGGCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLPPAWP*LMAPRS
Trigger: GCTCCTGGGGGCCATCAGCCACGGCCAGGCAGGGGG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCCCCCTGCCTGGCCGTaGCTGATGGCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGPPAWP*LMAPRS
Trigger: GCTCCTGGGGGCCATCAGCCACGGCCAGGCAGGGGG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACCCCCTGCCTGGCCGTaGCTGATGGCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVPPAWP*LMAPRS
Trigger: GCTCCTGGGGGCCATCAGCCACGGCCAGGCAGGGGG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGTCCATTGGGCCACTCTaGGAACATGCAGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLSIGPL*EHAGSE
Trigger: CTCGGACCCTGCATGTTCCCAGAGTGGCCCAATGGA...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTTGTCCTCTGATGCGATaGGCAGGGCCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSCPLMR*AGPVGC
Trigger: GCAGCCCACAGGCCCTGCCCATCGCATCAGAGGACA...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCACATGGAGCCCAGATaGAGGGACCCTGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSHMEPR*RDPVLW
Trigger: CCACAGGACAGGGTCCCTCCATCTGGGCTCCATGTG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCTGTCCCGAGACCAGCTaGGCCCTGGCCCGGAACCGC +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTCPETS*ALARNR
Trigger: GCGGTTCCGGGCCAGGGCCCAGCTGGTCTCGGGACA...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCCACGCAGACGTCCTTaGCCTTGGCTGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLPRRRP*PWLGRC
Trigger: GCATCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCGGACCCTGCTGTGTCTaGAAGCCCTTCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLGPCCV*KPFLGE
Trigger: CTCCCCAAGGAAGGGCTTCCAGACACAGCAGGGTCC...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACACCAGTTTTCAGGCTCTaGCCAGAGCCTCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTPVFRL*PEPPPA
Trigger: GGCAGGGGGAGGCTCTGGCCAGAGCCTGAAAACTGG...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCCAGTTTTCAGGCTCTaGCCAGAGCCTCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSPVFRL*PEPPPA
Trigger: GGCAGGGGGAGGCTCTGGCCAGAGCCTGAAAACTGG...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGGACTGGCGCAAGCCTaGCTCTGGGGGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTGLAQA*LWGPLP
Trigger: GGGCAGTGGCCCCCAGAGCCAGGCTTGCGCCAGTCC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCGGACAGGAGTCCCTGTaGAAGTGCTGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLGQESL*KCWPRP
Trigger: TGGCCGTGGCCAGCACTTCCACAGGGACTCCTGTCC...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGGACAGGAGTCCCTGTaGAAGTGCTGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSGQESL*KCWPRP
Trigger: TGGCCGTGGCCAGCACTTCCACAGGGACTCCTGTCC...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCAGCTCCAAGACCCCTaGCCGGACCTCAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGQLQDP*PDLSST
Trigger: GGTGCTGCTGAGGTCCGGCCAGGGGTCTTGGAGCTG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTAGGGCTCCCGGGAGCTaGCACAGGTGTCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPRAPGS*HRCQRG
Trigger: CCCCCGCTGACACCTGTGCCAGCTCCCGGGAGCCCT...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCCCTGCTGTGCCTCCTaGAGGAGAAGGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSPCCAS*RRRLEN
Trigger: GTTTTCCAGCCTTCTCCTTCAGGAGGCACAGCAGGG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTGGGGTCCCGCAGGTTaGACAGCAGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLWGPAG*TAGCDT
Trigger: AGTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCA...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGTGGGGTCCCGCAGGTTaGACAGCAGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQWGPAG*TAGCDT
Trigger: AGTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCA...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTTGGGGTCCCGCAGGTTaGACAGCAGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSWGPAG*TAGCDT
Trigger: AGTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCA...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGGTCCATGTCCCGCTaGATCTCCACTTCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLWSMSR*ISTSPL
Trigger: CAAGGGCGAAGTGGAGATTCAGCGGGACATGGACCA...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCCCCGTGGTGTCCTCTaGTGCGATGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRPRGVL*CDGQGL
Trigger: CAGGCCCTGCCCATCGCATCAGAGGACACCACGGGG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGCCCCGTGGTGTCCTCTaGTGCGATGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRPRGVL*CDGQGL
Trigger: CAGGCCCTGCCCATCGCATCAGAGGACACCACGGGG...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGACAGACTTGAGTGAGTaGCCTCCAGACCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQTDLSE*PPDLGP
Trigger: GGGGCCCAGGTCTGGAGGTCACTCACTCAAGTCTGT...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCAAGGCTTGGAGCTGGTaGCTCATGGTCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLKAWSW*LMVARD
Trigger: ATCCCTGGCGACCATGAGTCACCAGCTCCAAGCCTT...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGCAGAGGCCTGTGCTaGCGCCCCCAGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRCRGLC*RPQAQC
Trigger: GCACTGTGCCTGGGGGCGTCAGCACAGGCCTCTGCA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGTATCCAGGGAGGAGCTaGGGCCGCCCAAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEYPGRS*GRPRAP
Trigger: GGGAGCCCTTGGGCGGCCTCAGCTCCTCCCTGGATA...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCACCCAGCAGGGCCCTaGACCATGGGCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQHPAGP*TMGLFF
Trigger: GAAGAAAAGGCCCATGGTGCAGGGCCCTGCTGGGTG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCAGAGGGCTGCCTCAATaGCAGCAGCAATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLRGLPQ*QQQCPP
Trigger: TGGAGGGCATTGCTGCTGGCATTGAGGCAGCCCTCT...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGGAGGGGATGCAGCCTaGCGAGCGGATCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPGGDAA*RADHGG
Trigger: CCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCC...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACACCCTTGGAGCTATACTaGCCCTGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTPLELY*PCPGSA
Trigger: AGCAGAGCCAGGGCAGGGGCAGTATAGCTCCAAGGG...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTTGCCCTCGCCCAGGATaGTGCCAGTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSCPRPG*CQFSGS
Trigger: AGAGCCTGAAAACTGGCAGCATCCTGGGCGAGGGCA...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCGAGTCCCTGTGGAAGTaGTGGCCACGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLESLWK*WPRPKP
Trigger: TGGCTTTGGCCGTGGCCAGCACTTCCACAGGGACTC...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGCGCTAGACAAACGCTaGAGAGGGCGGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSALDKR*RGRGME
Trigger: CTCCATCCCCCGCCCTCTGCAGCGTTTGTCTAGCGC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR GCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGGCACCGAGGGCAGCTaGATGTGGAGCCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTGTEGS*MWSPGA
Trigger: GGCTCCTGGGCTCCACATGCAGCTGCCCTCGGTGCC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGGCACCGAGGGCAGCTaGATGTGGAGCCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPGTEGS*MWSPGA
Trigger: GGCTCCTGGGCTCCACATGCAGCTGCCCTCGGTGCC...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTTGGAGAGGGAGGTCTaGAAGGGCCTCCCAAGGACT +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLLEREV*KGLPRT
Trigger: AGTCCTTGGGAGGCCCTTGCAGACCTCCCTCTCCAA...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGAAGGCTGGAAAACCTaGCACCCAGCAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSEGWKT*HPAGPC
Trigger: GCAGGGCCCTGCTGGGTGCCAGGTTTTCCAGCCTTC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGCTCTTCAGCCTCCATTaGGCCACTCTGGGAACATGC +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLLFSLH*ATLGTC
Trigger: GCATGTTCCCAGAGTGGCCCAATGGAGGCTGAAGAG...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCTCCTCACTCAGCACTaGGTCTGGGAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLLLTQH*VWELPK
Trigger: CTTCGGGAGCTCCCAGACCCAGTGCTGAGTGAGGAG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGCAGGCTGCGATACTTaGTCTTGTACCGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLAGCDT*SCTGHW
Trigger: CCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGC...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGCAGCGGGCCAGCTCCTaGGGGGCCAGCTGCATCGAG +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKQRASS*GASCIE
Trigger: CTCGATGCAGCTGGCCCCCCAGGAGCTGGCCCGCTG...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACAGCGGGCCAGCTCCTaGGGGGCCAGCTGCATCGAG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVQRASS*GASCIE
Trigger: CTCGATGCAGCTGGCCCCCCAGGAGCTGGCCCGCTG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCTGTCCTCTGATGCGATaGGCAGGGCCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVCPLMR*AGPVGC
Trigger: GCAGCCCACAGGCCCTGCCCATCGCATCAGAGGACA...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGGTCTAAGAAGTGGTaGTCATGCTGCCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSGSKKW*SCCPVV
Trigger: CACCACGGGGCAGCATGACCACCACTTCTTAGACCC...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCAGGGACCCTGTCCTGTaGTTCCGTGGGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLRDPVL*FRGRQL
Trigger: GAGTTGTCTCCCACGGAACCACAGGACAGGGTCCCT...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTAGGGCAGGGCCTTTGTaGGTGCAGCAGGCACATGGA +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSRAGPL*VQQAHG
Trigger: TCCATGTGCCTGCTGCACCCACAAAGGCCCTGCCCT...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTGTCCCGAGACCAGCTaGGCCCTGGCCCGGAACCGC +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVCPETS*ALARNR
Trigger: GCGGTTCCGGGCCAGGGCCCAGCTGGTCTCGGGACA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGACGGTGGGCAGAGCCTaGACAAGCCGACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQTVGRA*TSRQLC
Trigger: ACACAGCTGTCGGCTTGTCCAGGCTCTGCCCACCGT...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGTCCTTGGCCTTGGCTaGGCAGATGCTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQVLGLG*ADAGQK
Trigger: CTTCTGGCCAGCATCTGCCCAGCCAAGGCCAAGGAC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAAGACGTCCTTGGCCTTaGCTGGGCAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTRRPWP*LGRCWP
Trigger: TGGCCAGCATCTGCCCAGCCAAGGCCAAGGACGTCT...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCAGTTTTCAGGCTCTaGCCAGAGCCTCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVPVFRL*PEPPPA
Trigger: GGCAGGGGGAGGCTCTGGCCAGAGCCTGAAAACTGG...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAGCTGGTGACTCATaGTCGCCAGGGATTCGAGGT +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSGAGDS*SPGIRG
Trigger: ACCTCGAATCCCTGGCGACCATGAGTCACCAGCTCC...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGAGAGGAGTCACGGGCTaGGCCAGGGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSERGVTG*ARGLWS
Trigger: GCTCCAGAGCCCCCTGGCCCAGCCCGTGACTCCTCT...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTACGTCCCCCGCCTaGGACATGTCTGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLSTSPA*DMSVHL
Trigger: TAGGTGGACAGACATGTCCCAGGCGGGGGACGTAGA...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCTCCTGGTCCTGTGCTaGAGCCTGGCCTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQLLVLC*SLAFIA
Trigger: AGCGATGAAGGCCAGGCTCCAGCACAGGACCAGGAG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCTGAGCAGGCCCTGCTaGCTTCAGTATCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQLSRPC*LQYPGR
Trigger: CCTCCCTGGATACTGAAGCCAGCAGGGCCTGCTCAG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGTGGGCGGCAGGGTCTaGGCCAACTTGTTCCTGTCG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSVGGRV*ANLFLS
Trigger: CGACAGGAACAAGTTGGCCCAGACCCTGCCGCCCAC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS-3UTR TCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGCCTTTTCTTCCTTCTaGGCCTCTGGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSAFSSF*ASGQVR
Trigger: CCTCACCTGCCCAGAGGCTCAGAAGGAAGAAAAGGC...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCCTTTTCTTCCTTCTaGGCCTCTGGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQAFSSF*ASGQVR
Trigger: CCTCACCTGCCCAGAGGCTCAGAAGGAAGAAAAGGC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCCCTGCTGTGCCTCCTaGAGGAGAAGGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQPCCAS*RRRLEN
Trigger: GTTTTCCAGCCTTCTCCTTCAGGAGGCACAGCAGGG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACATGGTCCATGTCCCGCTaGATCTCCACTTCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTWSMSR*ISTSPL
Trigger: CAAGGGCGAAGTGGAGATTCAGCGGGACATGGACCA...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCGTGGGCTGCAGTCCATaGACATCTGCGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVVGCSP*TSAVPP
Trigger: TGGTGGGACCGCAGATGTTCATGGACTGCAGCCCAC...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCACAGACTTGAGTGAGTaGCCTCCAGACCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSTDLSE*PPDLGP
Trigger: GGGGCCCAGGTCTGGAGGTCACTCACTCAAGTCTGT...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000452755.6
CDS-3UTR TCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTAGCAACAGACTTGAGTaGGTGACCTCCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSSNRLE*VTSRPG
Trigger: CCCAGGTCTGGAGGTCACTCACTCAAGTCTGTTGCT...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCGGAGCTGAGATCACGTaGTGCGGGGGAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTGAEIT*CGGGRP
Trigger: GGGCCTCCCTCCCCCGCATCACGTGATCTCAGCTCC...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCCCTTCCTCACACTCTaGATGAGCCCCTTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQPFLTL*MSPLPP
Trigger: AGGAGGCAAGGGGCTCATTCAGAGTGTGAGGAAGGG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTTCCCCACGAGGGCTCTaGTCAAGCCACAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSSPRGL*SSHRKS
Trigger: TGACTTCCTGTGGCTTGATCAGAGCCCTCGTGGGGA...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCCTGTGCAGCTGAACTaGGGGACTCCCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIPVQLN*GTPLHW
Trigger: CCAGTGGAGGGGAGTCCCTCAGTTCAGCTGCACAGG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTGCAGAGGCCTGTGCTaGCGCCCCCAGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVCRGLC*RPQAQC
Trigger: GCACTGTGCCTGGGGGCGTCAGCACAGGCCTCTGCA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTTATCCAGGGAGGAGCTaGGGCCGCCCAAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGYPGRS*GRPRAP
Trigger: GGGAGCCCTTGGGCGGCCTCAGCTCCTCCCTGGATA...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCATCTTCTCTGCTCCATaGATGGGCCTGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLIFSAP*MGLSRP
Trigger: GGGCCTGCTCAGGCCCATTCATGGAGCAGAGAAGAT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGTGGGCTGCAGTCCATaGACATCTGCGGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQVGCSP*TSAVPD
Trigger: ATCTGGGACCGCAGATGTTCATGGACTGCAGCCCAC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGAGCTTTGGTGGCAGCTaGCCCCCTGCCTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKESFGGS*PPAWPW
Trigger: CCACGGCCAGGCAGGGGGGCAGCTGCCACCAAAGCT...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCAGGGTCCCCTGCTGTaGCTCCTGAAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGQGPLL*LLKEKA
Trigger: AGCCTTCTCCTTCAGGAGGCACAGCAGGGGACCCTG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGCTGAGTCCTCTGGCTaGTCCGGAAGAGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSAESSG*SGRESS
Trigger: AGAGGATTCTCTTCCGGAGCAGCCAGAGGACTCAGC...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCAGGTCCCAGAGGGCTaGCTCAATGCCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLQVPEG*LNASSN
Trigger: ATTGCTGCTGGCATTGAGGCAGCCCTCTGGGACCTG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCAAGAAGTGGTGGTCATaGTGCCCCGTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLKKWWS*CPVVSS
Trigger: AGAGGACACCACGGGGCAGCATGACCACCACTTCTT...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGGAGGGGATGCAGCCTaGCGAGCGGATCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEGGDAA*RADHGG
Trigger: CCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCC...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCAATGTTGGAGGGGATaGAGCCTGCCGAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLQCWRG*SLPSGS
Trigger: TGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACACAATGTTGGAGGGGATaGAGCCTGCCGAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTQCWRG*SLPSGS
Trigger: TGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTG...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCGAGCTATACTGCCCCTaGCCTGGCTCTGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIELYCP*PGSAAR
Trigger: CCTGGCAGCAGAGCCAGGGCAGGGGCAGTATAGCTC...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGACCTCAGCAGCACCTaGAGCCCGGGAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEDLSST*SPGAAT
Trigger: GGTGGCAGCTCCCGGGCTGCAGGTGCTGCTGAGGTC...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGGAGGCCAGCAGACCTaGTACAAAGTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQGGQQT*YKVSWG
Trigger: GCCCCAGGAAACTTTGTAGCAGGTCTGCTGGCCTCC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCTCCTCCTGGTCCTGTaGTGGAGCCTGGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSLLLVL*WSLAFI
Trigger: GATGAAGGCCAGGCTCCAGCACAGGACCAGGAGGAG...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR GCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCTGAGCTTCTGTCTGTaGCCCGGTCTTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGLSFCL*PGLGHR
Trigger: CCTGTGCCCAAGACCGGGGCACAGACAGAAGCTCAG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCCAGTCCATGAACATCTaGGGTCCCAGATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLQSMNI*GPRSSR
Trigger: CCTGGAGGATCTGGGACCGCAGATGTTCATGGACTG...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGATGCAGGGTCCGAGCTaGGGTCGCCAAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLMQGPS*GRQGPG
Trigger: CCCTGGCCCTTGGCGACCCCAGCTCGGACCCTGCAT...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCTCCTCACTCAGCACTaGGTCTGGGAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSLLTQH*VWELPK
Trigger: CTTCGGGAGCTCCCAGACCCAGTGCTGAGTGAGGAG...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCCCCTTTTCTCCTCCTaGTCCCGCCAGCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGPLFSS*SRQRAS
Trigger: GCTGGCCCGCTGGCGGGACCAGGAGGAGAAAAGGGG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGATGGGCAGGGCCTGTaGGCTGCAGTCCATGAACAT +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQDGQGL*AAVHEH
Trigger: ATGTTCATGGACTGCAGCCCACAGGCCCTGCCCATC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCGGTCATGCTGCCCCGTaGTGTCCTCTGATGCGATGG +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVGHAAP*CPLMRW
Trigger: CCATCGCATCAGAGGACACCACGGGGCAGCATGACC...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCAGGGACCCTGTCCTGTaGTTCCGTGGGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLRDPVL*FRGRQL
Trigger: GAGTTGTCTCCCACGGAACCACAGGACAGGGTCCCT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCACGGTGGGCAGAGCCTaGACAAGCCGACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGTVGRA*TSRQLC
Trigger: ACACAGCTGTCGGCTTGTCCAGGCTCTGCCCACCGT...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCACCGAGCGGATCACGGTaGGCAGAGCCTGGACAAGCC +
Preference number: 4 (lower is better)
Translates to: KQEVQTGQVGRADHPLLAPSGSR*AEPGQA
Trigger: GGCTTGTCCAGGCTCTGCCCACCGTGATCCGCTCGG...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGTGGCTGGGCAGATGCTaGCCAGAAGGTCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQWLGRC*PEGPRQ
Trigger: TTGTCTGGGACCTTCTGGCCAGCATCTGCCCAGCCA...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCAGACGTCCTTGGCCTTaGCTGGGCAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVRRPWP*LGRCWP
Trigger: TGGCCAGCATCTGCCCAGCCAAGGCCAAGGACGTCT...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTAGCAGGCGGCAGTTCTaGGTGTCCCGGGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPSRRQF*VSRAPC
Trigger: ACATGGGGCCCGGGACACCCAGAACTGCCGCCTGCT...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCACAGAGGCCAGCCCGTaGCGCTGCCTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVTEASP*RCLSLR
Trigger: CCTCAATGATAGGCAGCGCCACGGGCTGGCCTCTGT...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCTGGAAGCCCTTCCTTaGGGAGCAGCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVLEALP*GAAQPA
Trigger: TGCTGGCTGTGCTGCTCCCCAAGGAAGGGCTTCCAG...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTGGACTGGCGCAAGCCTaGCTCTGGGGGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPGLAQA*LWGPLP
Trigger: GGGCAGTGGCCCCCAGAGCCAGGCTTGCGCCAGTCC...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTTGCCGGAGCAGGGCTTaGTGGGGACAGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPCRSRA*WGQESL
Trigger: CAGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCA...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCGGGGGATGGAGCTCTTaGTCTGGGGGCACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGGGWSS*SGGTVR
Trigger: CCTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCC...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGCAGAGGGCGGGGGATaGAGCTCTTGGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGAEGGG*SSWSGG
Trigger: GCCCCCAGACCAAGAGCTCCATCCCCCGCCCTCTGC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGCAGAGGGCGGGGGATaGAGCTCTTGGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWAEGGG*SSWSGG
Trigger: GCCCCCAGACCAAGAGCTCCATCCCCCGCCCTCTGC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGGGCCAGGGGGCTCTaGAGCTGCAAGGGCGCTAGA +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRWARGL*SCKGAR
Trigger: TCTAGCGCCCTTGCAGCTCCAGAGCCCCCTGGCCCA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGAGAGGAGTCACGGGCTaGGCCAGGGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKERGVTG*ARGLWS
Trigger: GCTCCAGAGCCCCCTGGCCCAGCCCGTGACTCCTCT...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTAGAGGAGTCACGGGCTaGGCCAGGGGGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVRGVTG*ARGLWS
Trigger: GCTCCAGAGCCCCCTGGCCCAGCCCGTGACTCCTCT...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTAAACCCCTGTTCTGGTaGGTAAGGAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSKPLFW*VRRVRP
Trigger: AGGCCTGACCCTCCTTACCCACCAGAACAGGGGTTT...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGTCCAGGTCAGCAACTTaGGGAGGGTCTCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQSRSAT*GGSPTD
Trigger: GTCTGTGGGAGACCCTCCCCAAGTTGCTGACCTGGA...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCCTCCACTGGGCACTaGGAACCCGACAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTPSTGH*EPDRAT
Trigger: TGTGGCCCTGTCGGGTTCCCAGTGCCCAGTGGAGGG...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGGGACTCCCCTCCACTaGGCACTGGGAACCCGACAG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRGTPLH*ALGTRQ
Trigger: CTGTCGGGTTCCCAGTGCCCAGTGGAGGGGAGTCCC...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTAGGGCTCCCGGGAGCTaGCACAGGTGTCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPRAPGS*HRCQRG
Trigger: CCCCCGCTGACACCTGTGCCAGCTCCCGGGAGCCCT...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTCTGTGCCCCGGTCTTaGGCACAGGGCACTGGACCT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGISVPRS*AQGTGP
Trigger: AGGTCCAGTGCCCTGTGCCCAAGACCGGGGCACAGA...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTTCTGGGGCAGCCTCCTaGGCTGGGTTCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPSGAAS*AGFLWP
Trigger: AGGCCAGAGGAACCCAGCCCAGGAGGCTGCCCCAGA...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCCAGGTCGTAGGGGGTaGCATCTCCATGAACCACTT +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSPGRRG*HLHEPL
Trigger: AAGTGGTTCATGGAGATGTCACCCCCTACGACCTGG...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGCCCCGTGGTGTCCTCTaGTGCGATGGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLPRGVL*CDGQGL
Trigger: CAGGCCCTGCCCATCGCATCAGAGGACACCACGGGG...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCGCTGCCTATCATTaGGGTATGAGTAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTGAAYH*GMSRAG
Trigger: GCCTGCTCTACTCATACCTCAATGATAGGCAGCGCC...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCAGCAACAGACTTGAGTaGGTGACCTCCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLSNRLE*VTSRPG
Trigger: CCCAGGTCTGGAGGTCACTCACTCAAGTCTGTTGCT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTAAGGAGACCATCTTTTaGACCTTCCCCAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSKETIF*TFPNQG
Trigger: CCCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTT...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCAAGGCTTGGAGCTGGTaGCTCATGGTCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSKAWSW*LMVARD
Trigger: ATCCCTGGCGACCATGAGTCACCAGCTCCAAGCCTT...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR GCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACAGCTTTGGTGGCAGCTaGCCCCCTGCCTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADSFGGS*PPAWPW
Trigger: CCACGGCCAGGCAGGGGGGCAGCTGCCACCAAAGCT...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCACTCTGGGAACATaGAGGGTCCGAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRATLGT*RVRAGV
Trigger: GACCCCAGCTCGGACCCTGCATGTTCCCAGAGTGGC...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCAGGTCCCAGAGGGCTaGCTCAATGCCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSQVPEG*LNASSN
Trigger: ATTGCTGCTGGCATTGAGGCAGCCCTCTGGGACCTG...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCAAGAAGTGGTGGTCATaGTGCCCCGTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLKKWWS*CPVVSS
Trigger: AGAGGACACCACGGGGCAGCATGACCACCACTTCTT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCAATGTTGGAGGGGATaGAGCCTGCCGAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGQCWRG*SLPSGS
Trigger: TGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTAGGACCATCCCCATGTaGTCCACAGAGGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPRTIPM*STEASP
Trigger: CGGGCTGGCCTCTGTGGAGCACATGGGGATGGTCCT...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGAGGACCATCCCCATGTaGTCCACAGAGGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRRTIPM*STEASP
Trigger: CGGGCTGGCCTCTGTGGAGCACATGGGGATGGTCCT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGCCAGGGGCTGGACCCTaGTGTGTCTGGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRPGAGP*CVWKPF
Trigger: GAAGGGCTTCCAGACACAGCAGGGTCCAGCCCCTGG...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGAGCTATACTGCCCCTaGCCTGGCTCTGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTELYCP*PGSAAR
Trigger: CCTGGCAGCAGAGCCAGGGCAGGGGCAGTATAGCTC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCCCTTGGAGCTATACTaGCCCTGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIPLELY*PCPGSA
Trigger: AGCAGAGCCAGGGCAGGGGCAGTATAGCTCCAAGGG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCTGCCCTCGCCCAGGATaGTGCCAGTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSCPRPG*CQFSGS
Trigger: AGAGCCTGAAAACTGGCAGCATCCTGGGCGAGGGCA...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR GCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGCCAGGGATTCGAGGTaGCGGAGCAGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGARDSR*RSRAWW
Trigger: CCACCAAGCCCTGCTCCGGCACCTCGAATCCCTGGC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGCCAGGGATTCGAGGTaGCGGAGCAGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWARDSR*RSRAWW
Trigger: CCACCAAGCCCTGCTCCGGCACCTCGAATCCCTGGC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGGCGCTAGACAAACGCTaGAGAGGGCGGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRALDKR*RGRGME
Trigger: CTCCATCCCCCGCCCTCTGCAGCGTTTGTCTAGCGC...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAGGGGGCTCTGGAGCTaGAAGGGCGCTAGACAAACG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIRGLWS*KGARQT
Trigger: CGTTTGTCTAGCGCCCTTGCAGCTCCAGAGCCCCCT...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCTGCAGCCCGGGAGCTaGCACCTCGAAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADLQPGS*HLEGPP
Trigger: AGGAGGCCCTTCGAGGTGGCAGCTCCCGGGCTGCAG...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR GCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCCTGGCCTTCATCGCTaGCAGTCCGCACGACACACA +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIPGLHR*QSARHT
Trigger: TGTGTGTCGTGCGGACTGGCAGCGATGAAGGCCAGG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCTGAGCAGGCCCTaGTGGCTTCAGTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEGLSRP*WLQYPG
Trigger: CCCTGGATACTGAAGCCAGCAGGGCCTGCTCAGGCC...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGATGGCCCCCAGGAGCTaGATCACTGGCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLMAPRS*ITGPEP
Trigger: GGGTTCCGGGCCAGTGATCCAGCTCCTGGGGGCCAT...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCCTGAAGGAGAAGGCTaGAAAACCTGGCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLPEGEG*KTWHPA
Trigger: TGCTGGGTGCCAGGTTTTCCAGCCTTCTCCTTCAGG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTATAGTACCTCCTGCATaGAACGGACAACAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSIVPPA*NGQQCP
Trigger: GGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTAT...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTTGTACCGGCCATTaGTGCCTTGTGTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLSCTGH*CLVSGP
Trigger: GGGACCTGACACAAGGCACCAATGGCCGGTACAAGA...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACATCTTGTACCGGCCATTaGTGCCTTGTGTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTSCTGH*CLVSGP
Trigger: GGGACCTGACACAAGGCACCAATGGCCGGTACAAGA...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCGCAGGCTGCGATACTTaGTCTTGTACCGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLAGCDT*SCTGHW
Trigger: CCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGC...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCCCTTTTCTCCTCCTaGTCCCGCCAGCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADPLFSS*SRQRAS
Trigger: GCTGGCCCGCTGGCGGGACCAGGAGGAGAAAAGGGG...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGATGGGCAGGGCCTGTaGGCTGCAGTCCATGAACAT +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSDGQGL*AAVHEH
Trigger: ATGTTCATGGACTGCAGCCCACAGGCCCTGCCCATC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGGGTCTAAGAAGTGGTaGTCATGCTGCCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSGSKKW*SCCPVV
Trigger: CACCACGGGGCAGCATGACCACCACTTCTTAGACCC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTTTGGGGTCTAAGAAGTaGTGGTCATGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSLGSKK*WSCCPV
Trigger: CACGGGGCAGCATGACCACCACTTCTTAGACCCCAA...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGGTTTTGGGCATCTCTaGAGCAGGCATAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLGFGHL*SRHRSL
Trigger: CAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACC...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACCGAGCGGATCACGGTaGGCAGAGCCTGGACAAGCC +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVPSGSR*AEPGQA
Trigger: GGCTTGTCCAGGCTCTGCCCACCGTGATCCGCTCGG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCCGAGCGGATCACGGTaGGCAGAGCCTGGACAAGCC +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGPSGSR*AEPGQA
Trigger: GGCTTGTCCAGGCTCTGCCCACCGTGATCCGCTCGG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGCCGAGCGGATCACGGTaGGCAGAGCCTGGACAAGCC +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKPSGSR*AEPGQA
Trigger: GGCTTGTCCAGGCTCTGCCCACCGTGATCCGCTCGG...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCGGTCCCAGACAATGTTaGAGGGGATGCAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIGPRQC*RGCSLP
Trigger: CGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACC...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCGTCCTTGGCCTTGGCTaGGCAGATGCTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIVLGLG*ADAGQK
Trigger: CTTCTGGCCAGCATCTGCCCAGCCAAGGCCAAGGAC...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCCACGCAGACGTCCTTaGCCTTGGCTGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRPRRRP*PWLGRC
Trigger: GCATCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGCCACGCAGACGTCCTTaGCCTTGGCTGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRPRRRP*PWLGRC
Trigger: GCATCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGG...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGTCCCGGGCCCCATGTaGGCACAGTCTGACCACGCA +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVVPGPM*AQSDHA
Trigger: TGCGTGGTCAGACTGTGCCCACATGGGGCCCGGGAC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTCCCGGGCCCCATGTaGGCACAGTCTGACCACGCA +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEVPGPM*AQSDHA
Trigger: TGCGTGGTCAGACTGTGCCCACATGGGGCCCGGGAC...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGAGCAGGCGGCAGTTCTaGGTGTCCCGGGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWSRRQF*VSRAPC
Trigger: ACATGGGGCCCGGGACACCCAGAACTGCCGCCTGCT...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGCGGCCTCCTGTCATCTaGCTGATAGTATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QGRWVGLTILSLQSHLSLRPPVI*LIVSLL
Trigger: GAGAAGAGATACTATCAGCCAGATGACAGGAGGCCG...CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCAGCAGAGATTCCCCTTaGAGCTATACTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLSRDSP*SYTAPA
Trigger: GGCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTAGCAGAGATTCCCCTTaGAGCTATACTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSSRDSP*SYTAPA
Trigger: GGCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCT...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTGCCGGAGCAGGGCTTaGTGGGGACAGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKCRSRA*WGQESL
Trigger: CAGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGCCGGAGCAGGGCTTaGTGGGGACAGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWCRSRA*WGQESL
Trigger: CAGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCA...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCATGGAGCTCTTGGTCTaGGGGCACAGTAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLMELLV*GHSKAW
Trigger: CCAAGCCTTACTGTGCCCCCAGACCAAGAGCTCCAT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGGCAGAGGGCGGGGGATaGAGCTCTTGGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLAEGGG*SSWSGG
Trigger: GCCCCCAGACCAAGAGCTCCATCCCCCGCCCTCTGC...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTGGGCCAGGGGGCTCTaGAGCTGCAAGGGCGCTAGA +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVWARGL*SCKGAR
Trigger: TCTAGCGCCCTTGCAGCTCCAGAGCCCCCTGGCCCA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTGGGCCAGGGGGCTCTaGAGCTGCAAGGGCGCTAGA +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKWARGL*SCKGAR
Trigger: TCTAGCGCCCTTGCAGCTCCAGAGCCCCCTGGCCCA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAAAACCCCTGTTCTGGTaGGTAAGGAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTKPLFW*VRRVRP
Trigger: AGGCCTGACCCTCCTTACCCACCAGAACAGGGGTTT...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTTCAAAACCCCTGTTCTaGTGGGTAAGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSSKPLF*WVRRVR
Trigger: CCTGACCCTCCTTACCCACCAGAACAGGGGTTTTGA...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACAGGGTCTCCTGTGCTaGGGCCTTCTACGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVQGLLC*GLLRPP
Trigger: CGGGGGACGTAGAAGGCCCCAGCACAGGAGACCCTG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCAGGGTCTCCTGTGCTaGGGCCTTCTACGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEQGLLC*GLLRPP
Trigger: CGGGGGACGTAGAAGGCCCCAGCACAGGAGACCCTG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGAAGGGCCTCCTTCCTaGGGATCTTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSEGPPS*GSSFCC
Trigger: GCAGCAGAAGGAAGATCCCCAGGAAGGAGGCCCTTC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACCCTCCACTGGGCACTaGGAACCCGACAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVPSTGH*EPDRAT
Trigger: TGTGGCCCTGTCGGGTTCCCAGTGCCCAGTGGAGGG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCCTTCCCCTGGAAGCTaGCTGAGCCTTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRPSPGS*LSLGLQ
Trigger: CTGGAGGCCAAGGCTCAGCCAGCTTCCAGGGGAAGG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGGCCTGTCCTGGTaGGAGTTGTCTGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLSGLSW*ELSELL
Trigger: CAGAAGCTCAGACAACTCCCACCAGGACAGGCCAGA...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCATGGGGTCCCGCAGGTTaGACAGCAGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: KQEVQTGQVGRADHPLLAWGPAG*TAGCDT
Trigger: AGTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCA...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTGGGCTGCAGTCCATaGACATCTGCGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPVGCSP*TSAVPP
Trigger: TGGTGGGACCGCAGATGTTCATGGACTGCAGCCCAC...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCTGGCCCGGAACCGCTTaGTGGAGAACATGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSWPGTA*WRTCPE
Trigger: TTCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCA...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR TCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCCTATCATTGAGGTATaGGTAGAGCAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSPIIEV*VEQAAV
Trigger: AACTGCCGCCTGCTCTACTCATACCTCAATGATAGG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCGGCGCTGCCTATCATTaGGGTATGAGTAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVGAAYH*GMSRAG
Trigger: GCCTGCTCTACTCATACCTCAATGATAGGCAGCGCC...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR TCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGACAGACTTGAGTGAGTaGCCTCCAGACCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRTDLSE*PPDLGP
Trigger: GGGGCCCAGGTCTGGAGGTCACTCACTCAAGTCTGT...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGAAGGAGACCATCTTTTaGACCTTCCCCAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQKETIF*TFPNQG
Trigger: CCCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTT...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCGGCCCTGGGCTTCCCTaGGTTTTCCCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTGPGLP*VFPPGV
Trigger: AACCCCAGGAGGGAAAACTCAGGGAAGCCCAGGGCC...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR TCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCCTGTGCAGCTGAACTaGGGGACTCCCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLPVQLN*GTPLHW
Trigger: CCAGTGGAGGGGAGTCCCTCAGTTCAGCTGCACAGG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCTGGTGGGAGTTGTCTaGGCTTCTGTCTGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRLVGVV*ASVCAP
Trigger: CGGGGCACAGACAGAAGCTCAGACAACTCCCACCAG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCACCCAGCAGGGCCCTaGACCATGGGCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTHPAGP*TMGLFF
Trigger: GAAGAAAAGGCCCATGGTGCAGGGCCCTGCTGGGTG...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAGCCACTCTGGGAACATaGAGGGTCCGAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVATLGT*RVRAGV
Trigger: GACCCCAGCTCGGACCCTGCATGTTCCCAGAGTGGC...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGTGGAACGGACAACAGTaGCCCGCACCCCAATATACA +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQWNGQQ*PAPQYT
Trigger: TGTATATTGGGGTGCGGGGCACTGTTGTCCGTTCCA...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCAGTCCATGAACATCTaGGGTCCCACCAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGQSMNI*GPTRSS
Trigger: GGAGGATCTGGTGGGACCGCAGATGTTCATGGACTG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCAAGTGGTGGTCATGCTaGCCCGTGGTGTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGKWWSC*PVVSSD
Trigger: ATCAGAGGACACCACGGGGCAGCATGACCACCACTT...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCAAGAAGTGGTGGTCATaGTGCCCCGTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVKKWWS*CPVVSS
Trigger: AGAGGACACCACGGGGCAGCATGACCACCACTTCTT...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR GCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCGCCAGCCCGTGGCGCTaGCTATCATTGAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIASPWR*LSLRYE
Trigger: CTCATACCTCAATGATAGGCAGCGCCACGGGCTGGC...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGAGGACCATCCCCATGTaGTCCACAGAGGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKERTIPM*STEASP
Trigger: CGGGCTGGCCTCTGTGGAGCACATGGGGATGGTCCT...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGACCATCCCCATGTaGTCCACAGAGGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVRTIPM*STEASP
Trigger: CGGGCTGGCCTCTGTGGAGCACATGGGGATGGTCCT...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGAGCTATACTGCCCCTaGCCTGGCTCTGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVELYCP*PGSAAR
Trigger: CCTGGCAGCAGAGCCAGGGCAGGGGCAGTATAGCTC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCACCTCGCCCAGGATGCTaGCAGTTTTCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KQEVQTGQVGRADHPLLAPRPGC*QFSGSG
Trigger: GCCAGAGCCTGAAAACTGGCAGCATCCTGGGCGAGG...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCCTCGCCCAGGATGCTaGCAGTTTTCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRPRPGC*QFSGSG
Trigger: GCCAGAGCCTGAAAACTGGCAGCATCCTGGGCGAGG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGGAGTCCCTGTGGAAGTaGTGGCCACGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRESLWK*WPRPKP
Trigger: TGGCTTTGGCCGTGGCCAGCACTTCCACAGGGACTC...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACGCCAGGGATTCGAGGTaGCGGAGCAGGGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADARDSR*RSRAWW
Trigger: CCACCAAGCCCTGCTCCGGCACCTCGAATCCCTGGC...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCGCTAGACAAACGCTaGAGAGGGCGGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLALDKR*RGRGME
Trigger: CTCCATCCCCCGCCCTCTGCAGCGTTTGTCTAGCGC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGCGCTAGACAAACGCTaGAGAGGGCGGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVALDKR*RGRGME
Trigger: CTCCATCCCCCGCCCTCTGCAGCGTTTGTCTAGCGC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCAGGGGGCTCTGGAGCTaGAAGGGCGCTAGACAAACG +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTRGLWS*KGARQT
Trigger: CGTTTGTCTAGCGCCCTTGCAGCTCCAGAGCCCCCT...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGAGGGGGCTCTGGAGCTaGAAGGGCGCTAGACAAACG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRRGLWS*KGARQT
Trigger: CGTTTGTCTAGCGCCCTTGCAGCTCCAGAGCCCCCT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTCTCCTCCTGGTCCTGTaGTGGAGCCTGGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPLLLVL*WSLAFI
Trigger: GATGAAGGCCAGGCTCCAGCACAGGACCAGGAGGAG...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGGGCAGCGAGTCCTTaGTCCAGCCTTCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLGAASP*SSLPLE
Trigger: TTCCAGGGGAAGGCTGGAGCAAGGACTCGCTGCCCC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCCCTTGGATCTTCTCTaGTCCATGAATGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSPLDLL*SMNGPE
Trigger: CTCAGGCCCATTCATGGAGCAGAGAAGATCCAAGGG...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCCCTTGGATCTTCTCTaGTCCATGAATGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQPLDLL*SMNGPE
Trigger: CTCAGGCCCATTCATGGAGCAGAGAAGATCCAAGGG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGCTGAGCTTCTGTCTGTaGCCCGGTCTTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRLSFCL*PGLGHR
Trigger: CCTGTGCCCAAGACCGGGGCACAGACAGAAGCTCAG...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCACAGGAGCTGGATCACTaGCCCGGAACCCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: KQEVQTGQVGRADHPLLAQELDH*PGTQVA
Trigger: TGCTACCTGGGTTCCGGGCCAGTGATCCAGCTCCTG...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCGAAGGCTGGAAAACCTaGCACCCAGCAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLEGWKT*HPAGPC
Trigger: GCAGGGCCCTGCTGGGTGCCAGGTTTTCCAGCCTTC...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGAAGGCTGGAAAACCTaGCACCCAGCAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLEGWKT*HPAGPC
Trigger: GCAGGGCCCTGCTGGGTGCCAGGTTTTCCAGCCTTC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTCCATTGGGCCACTCTaGGAACATGCAGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGISIGPL*EHAGSE
Trigger: CTCGGACCCTGCATGTTCCCAGAGTGGCCCAATGGA...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAATAGTACCTCCTGCATaGAACGGACAACAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTIVPPA*NGQQCP
Trigger: GGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTAT...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCGCAGGCTGCGATACTTaGTCTTGTACCGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVAGCDT*SCTGHW
Trigger: CCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGC...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGGTCATTTTGGAGGCTaGAAGTCTGCACGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQGHFGG*KSARLL
Trigger: AAGGAGCCGTGCAGACTTCCAGCCTCCAAAATGACC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCGGTCATTTTGGAGGCTaGAAGTCTGCACGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLGHFGG*KSARLL
Trigger: AAGGAGCCGTGCAGACTTCCAGCCTCCAAAATGACC...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACATCCACTTCGCCCTTGTaGGTCATTTTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTSTSPL*VILEAG
Trigger: TCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGA...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCCACTTCGCCCTTGTaGGTCATTTTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLSTSPL*VILEAG
Trigger: TCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGA...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCTGTCCTCTGATGCGATaGGCAGGGCCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLCPLMR*AGPVGC
Trigger: GCAGCCCACAGGCCCTGCCCATCGCATCAGAGGACA...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTATGTCCTCTGATGCGATaGGCAGGGCCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVCPLMR*AGPVGC
Trigger: GCAGCCCACAGGCCCTGCCCATCGCATCAGAGGACA...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGTGGGAGACAACTCCCTaGTTTTGGGCATCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQWETTP*FWASLE
Trigger: CTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCA...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGCACATGGAGCCCAGATaGAGGGACCCTGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEHMEPR*RDPVLW
Trigger: CCACAGGACAGGGTCCCTCCATCTGGGCTCCATGTG...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGAGGGCAGGGCCTTTGTaGGTGCAGCAGGCACATGGA +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSERAGPL*VQQAHG
Trigger: TCCATGTGCCTGCTGCACCCACAAAGGCCCTGCCCT...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGTGTCCCGAGACCAGCTaGGCCCTGGCCCGGAACCGC +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGCPETS*ALARNR
Trigger: GCGGTTCCGGGCCAGGGCCCAGCTGGTCTCGGGACA...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGGGTCCCAGACAATGTTaGAGGGGATGCAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRGPRQC*RGCSLP
Trigger: CGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACC...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGAGACGTCCTTGGCCTTaGCTGGGCAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRRRPWP*LGRCWP
Trigger: TGGCCAGCATCTGCCCAGCCAAGGCCAAGGACGTCT...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGGTCCCGGGCCCCATGTaGGCACAGTCTGACCACGCA +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLVPGPM*AQSDHA
Trigger: TGCGTGGTCAGACTGTGCCCACATGGGGCCCGGGAC...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTAGCAGGCGGCAGTTCTaGGTGTCCCGGGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPSRRQF*VSRAPC
Trigger: ACATGGGGCCCGGGACACCCAGAACTGCCGCCTGCT...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCTGGAAGCCCTTCCTTaGGGAGCAGCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRLEALP*GAAQPA
Trigger: TGCTGGCTGTGCTGCTCCCCAAGGAAGGGCTTCCAG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCCAGTTTTCAGGCTCTaGCCAGAGCCTCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLPVFRL*PEPPPA
Trigger: GGCAGGGGGAGGCTCTGGCCAGAGCCTGAAAACTGG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGGACAGGAGTCCCTGTaGAAGTGCTGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVGQESL*KCWPRP
Trigger: TGGCCGTGGCCAGCACTTCCACAGGGACTCCTGTCC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGGACAGGAGTCCCTGTaGAAGTGCTGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWGQESL*KCWPRP
Trigger: TGGCCGTGGCCAGCACTTCCACAGGGACTCCTGTCC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCGGAGCTGGTGACTCATaGTCGCCAGGGATTCGAGGT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIGAGDS*SPGIRG
Trigger: ACCTCGAATCCCTGGCGACCATGAGTCACCAGCTCC...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATGGAGCTCTTGGTCTaGGGGCACAGTAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGMELLV*GHSKAW
Trigger: CCAAGCCTTACTGTGCCCCCAGACCAAGAGCTCCAT...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGGGGGATGGAGCTCTTaGTCTGGGGGCACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTGGWSS*SGGTVR
Trigger: CCTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGGGGGATGGAGCTCTTaGTCTGGGGGCACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPGGWSS*SGGTVR
Trigger: CCTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCC...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACATCAAAACCCCTGTTCTaGTGGGTAAGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTSKPLF*WVRRVR
Trigger: CCTGACCCTCCTTACCCACCAGAACAGGGGTTTTGA...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTCTGTGCCCCGGTCTTaGGCACAGGGCACTGGACCT +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVSVPRS*AQGTGP
Trigger: AGGTCCAGTGCCCTGTGCCCAAGACCGGGGCACAGA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGGGCTGGGTTCCTCTaGCCTGTCCTGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRWAGFL*PVLVGV
Trigger: AACTCCCACCAGGACAGGCCAGAGGAACCCAGCCCA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCCAGGTCGTAGGGGGTaGCATCTCCATGAACCACTT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIPGRRG*HLHEPL
Trigger: AAGTGGTTCATGGAGATGTCACCCCCTACGACCTGG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGTGGGCTGCAGTCCATaGACATCTGCGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWVGCSP*TSAVPP
Trigger: TGGTGGGACCGCAGATGTTCATGGACTGCAGCCCAC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCATGTGGGCACAGTCTaGCCACGCAGACGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVHVGTV*PRRRPW
Trigger: CCAAGGACGTCTGCGTGGTCAGACTGTGCCCACATG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACATGTGGGCACAGTCTaGCCACGCAGACGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVHVGTV*PRRRPW
Trigger: CCAAGGACGTCTGCGTGGTCAGACTGTGCCCACATG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCATGTGGGCACAGTCTaGCCACGCAGACGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLHVGTV*PRRRPW
Trigger: CCAAGGACGTCTGCGTGGTCAGACTGTGCCCACATG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCAAGGAGACCATCTTTTaGACCTTCCCCAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSKETIF*TFPNQG
Trigger: CCCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTT...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGAAGGCTTGGAGCTGGTaGCTCATGGTCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRKAWSW*LMVARD
Trigger: ATCCCTGGCGACCATGAGTCACCAGCTCCAAGCCTT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACTGGTGGGAGTTGTCTaGGCTTCTGTCTGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVLVGVV*ASVCAP
Trigger: CGGGGCACAGACAGAAGCTCAGACAACTCCCACCAG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGAGCTTTGGTGGCAGCTaGCCCCCTGCCTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGSFGGS*PPAWPW
Trigger: CCACGGCCAGGCAGGGGGGCAGCTGCCACCAAAGCT...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCAGGGTCCCCTGCTGTaGCTCCTGAAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEQGPLL*LLKEKA
Trigger: AGCCTTCTCCTTCAGGAGGCACAGCAGGGGACCCTG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTGTCCATAGTACCTCCTaGATGGAACGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSVHSTS*MERTTV
Trigger: CACTGTTGTCCGTTCCATGCAGGAGGTACTATGGAC...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGAGAGGGCTGCCTCAATaGCAGCAGCAATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRRGLPQ*QQQCPP
Trigger: TGGAGGGCATTGCTGCTGGCATTGAGGCAGCCCTCT...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGAGAGGGCTGCCTCAATaGCAGCAGCAATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSERGLPQ*QQQCPP
Trigger: TGGAGGGCATTGCTGCTGGCATTGAGGCAGCCCTCT...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCACGGCTCCTTCTGTTaGTGCTCAATGATATTCAGG +
Preference number: 4 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSHGSFC*CSMIFR
Trigger: CCTGAATATCATTGAGCAGCAACAGAAGGAGCCGTG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCAGCCCGTGGCGCTaGCTATCATTGAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRASPWR*LSLRYE
Trigger: CTCATACCTCAATGATAGGCAGCGCCACGGGCTGGC...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGCCAGCCCGTGGCGCTaGCTATCATTGAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEASPWR*LSLRYE
Trigger: CTCATACCTCAATGATAGGCAGCGCCACGGGCTGGC...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGCCAGGGGCTGGACCCTaGTGTGTCTGGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLPGAGP*CVWKPF
Trigger: GAAGGGCTTCCAGACACAGCAGGGTCCAGCCCCTGG...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCCCTTGGAGCTATACTaGCCCTGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEPLELY*PCPGSA
Trigger: AGCAGAGCCAGGGCAGGGGCAGTATAGCTCCAAGGG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCCTCGCCCAGGATGCTaGCAGTTTTCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEPRPGC*QFSGSG
Trigger: GCCAGAGCCTGAAAACTGGCAGCATCCTGGGCGAGG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGTGCCCTCGCCCAGGATaGTGCCAGTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSECPRPG*CQFSGS
Trigger: AGAGCCTGAAAACTGGCAGCATCCTGGGCGAGGGCA...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGAGTCCCTGTGGAAGTaGTGGCCACGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWESLWK*WPRPKP
Trigger: TGGCTTTGGCCGTGGCCAGCACTTCCACAGGGACTC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGAGTCCCTGTGGAAGTaGTGGCCACGGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEESLWK*WPRPKP
Trigger: TGGCTTTGGCCGTGGCCAGCACTTCCACAGGGACTC...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTAGGGGGCTCTGGAGCTaGAAGGGCGCTAGACAAACG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVRGLWS*KGARQT
Trigger: CGTTTGTCTAGCGCCCTTGCAGCTCCAGAGCCCCCT...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCCTGGCCTTCATCGCTaGCAGTCCGCACGACACACA +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVPGLHR*QSARHT
Trigger: TGTGTGTCGTGCGGACTGGCAGCGATGAAGGCCAGG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCAGGGAACCGCTTCTTaGAGGGTAGAAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIQGTAS*RVEGVR
Trigger: TCTGACCCCTTCTACCCTCCAAGAAGCGGTTCCCTG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACTCCTCACTCAGCACTaGGTCTGGGAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVLLTQH*VWELPK
Trigger: CTTCGGGAGCTCCCAGACCCAGTGCTGAGTGAGGAG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTCCTCACTCAGCACTaGGTCTGGGAGCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVLLTQH*VWELPK
Trigger: CTTCGGGAGCTCCCAGACCCAGTGCTGAGTGAGGAG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCCTTGTGGGTCATTTTaGAGGCTGGAAGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSPCGSF*RLEVCT
Trigger: CGTGCAGACTTCCAGCCTCCAAAATGACCCACAAGG...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGGTCATGCTGCCCCGTaGTGTCCTCTGATGCGATGG +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGGHAAP*CPLMRW
Trigger: CCATCGCATCAGAGGACACCACGGGGCAGCATGACC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGGGTCTAAGAAGTGGTaGTCATGCTGCCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRGSKKW*SCCPVV
Trigger: CACCACGGGGCAGCATGACCACCACTTCTTAGACCC...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACATGCAGATGTGGCAGTTaGGGTCTAAGAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTCRCGS*GLRSGG
Trigger: ACCACCACTTCTTAGACCCCAACTGCCACATCTGCA...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTTGTCCCCGCAGCTCTTaGCGGCTTCGAAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGCPRSS*RLRRSL
Trigger: TAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACA...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTATGTCCCCGCAGCTCTTaGCGGCTTCGAAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVCPRSS*RLRRSL
Trigger: TAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACA...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGTCCCCGCAGCTCTTaGCGGCTTCGAAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWCPRSS*RLRRSL
Trigger: TAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACA...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTGTCCCCGCAGCTCTTaGCGGCTTCGAAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKCPRSS*RLRRSL
Trigger: TAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGTGGCTTAGGGCTTTCTaGAAGATATTGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQWLRAF*KILSPQ
Trigger: CTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCA...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCAGGCATAGGAGTTTaGCTTAGGGCTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQAGIGV*LRAFWK
Trigger: CTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGAGGGACCCTGTCCTGTaGTTCCGTGGGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRRDPVL*FRGRQL
Trigger: GAGTTGTCTCCCACGGAACCACAGGACAGGGTCCCT...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTAGGGACCCTGTCCTGTaGTTCCGTGGGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPRDPVL*FRGRQL
Trigger: GAGTTGTCTCCCACGGAACCACAGGACAGGGTCCCT...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCACATGGAGCCCAGATaGAGGGACCCTGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVHMEPR*RDPVLW
Trigger: CCACAGGACAGGGTCCCTCCATCTGGGCTCCATGTG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGAGGGCAGGGCCTTTGTaGGTGCAGCAGGCACATGGA +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKERAGPL*VQQAHG
Trigger: TCCATGTGCCTGCTGCACCCACAAAGGCCCTGCCCT...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGGCAGGGCCTTTGTaGGTGCAGCAGGCACATGGA +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVRAGPL*VQQAHG
Trigger: TCCATGTGCCTGCTGCACCCACAAAGGCCCTGCCCT...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGGTCCCAGACAATGTTaGAGGGGATGCAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKGPRQC*RGCSLP
Trigger: CGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACC...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGGTCCCAGACAATGTTaGAGGGGATGCAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEGPRQC*RGCSLP
Trigger: CGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACC...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCGTCCTTGGCCTTGGCTaGGCAGATGCTGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTVLGLG*ADAGQK
Trigger: CTTCTGGCCAGCATCTGCCCAGCCAAGGCCAAGGAC...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTAGACGTCCTTGGCCTTaGCTGGGCAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVRRPWP*LGRCWP
Trigger: TGGCCAGCATCTGCCCAGCCAAGGCCAAGGACGTCT...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTAGCAGGCGGCAGTTCTaGGTGTCCCGGGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: STANIVKQEVQTGQVGRASRRQF*VSRAPC
Trigger: ACATGGGGCCCGGGACACCCAGAACTGCCGCCTGCT...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCACAGAGGCCAGCCCGTaGCGCTGCCTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLTEASP*RCLSLR
Trigger: CCTCAATGATAGGCAGCGCCACGGGCTGGCCTCTGT...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTACAGAGGCCAGCCCGTaGCGCTGCCTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVTEASP*RCLSLR
Trigger: CCTCAATGATAGGCAGCGCCACGGGCTGGCCTCTGT...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAACAGAGGCCAGCCCGTaGCGCTGCCTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVTEASP*RCLSLR
Trigger: CCTCAATGATAGGCAGCGCCACGGGCTGGCCTCTGT...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCTGGAAGCCCTTCCTTaGGGAGCAGCACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGLEALP*GAAQPA
Trigger: TGCTGGCTGTGCTGCTCCCCAAGGAAGGGCTTCCAG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGGACCCTGCTGTGTCTaGAAGCCCTTCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKGPCCV*KPFLGE
Trigger: CTCCCCAAGGAAGGGCTTCCAGACACAGCAGGGTCC...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGGACCCTGCTGTGTCTaGAAGCCCTTCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGGPCCV*KPFLGE
Trigger: CTCCCCAAGGAAGGGCTTCCAGACACAGCAGGGTCC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGGACCCTGCTGTGTCTaGAAGCCCTTCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWGPCCV*KPFLGE
Trigger: CTCCCCAAGGAAGGGCTTCCAGACACAGCAGGGTCC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGGAGCTGGTGACTCATaGTCGCCAGGGATTCGAGGT +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRGAGDS*SPGIRG
Trigger: ACCTCGAATCCCTGGCGACCATGAGTCACCAGCTCC...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCTCAAAACCCCTGTTCTaGTGGGTAAGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVSKPLF*WVRRVR
Trigger: CCTGACCCTCCTTACCCACCAGAACAGGGGTTTTGA...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCGCACAACACGGGCCCTaGGCTTCCCTGAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTAQHGP*ASLSFP
Trigger: GGGAAAACTCAGGGAAGCCCAGGGCCCGTGTTGTGC...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTTCTACGTCCCCCGCCTaGGACATGTCTGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPSTSPA*DMSVHL
Trigger: TAGGTGGACAGACATGTCCCAGGCGGGGGACGTAGA...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGAAGGGCCTCCTTCCTaGGGATCTTCCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTEGPPS*GSSFCC
Trigger: GCAGCAGAAGGAAGATCCCCAGGAAGGAGGCCCTTC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAACCTGGAGCCTCTTaGAGGTCAGAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIKPGAS*RSELSP
Trigger: AGGGGAGAGCTCTGACCTCCAAGAGGCTCCAGGTTT...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGTCCAGGTCAGCAACTTaGGGAGGGTCTCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSESRSAT*GGSPTD
Trigger: GTCTGTGGGAGACCCTCCCCAAGTTGCTGACCTGGA...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCTCCTGGTCCTGTGCTaGAGCCTGGCCTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLLLVLC*SLAFIA
Trigger: AGCGATGAAGGCCAGGCTCCAGCACAGGACCAGGAG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTGAGCAGGCCCTGCTaGCTTCAGTATCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLLSRPC*LQYPGR
Trigger: CCTCCCTGGATACTGAAGCCAGCAGGGCCTGCTCAG...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR TCA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCACAGGTGAGGGTGAGCTaGCCTCCATCAAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: KQEVQTGQVGRADHPLLAQVRVS*PPSSPL
Trigger: TAGAGGACTTGATGGAGGTCAGCTCACCCTCACCTG...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTCAGGTGAGGGTGAGCTaGCCTCCATCAAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPQVRVS*PPSSPL
Trigger: TAGAGGACTTGATGGAGGTCAGCTCACCCTCACCTG...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCCCTGCTGTGCCTCCTaGAGGAGAAGGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTPCCAS*RRRLEN
Trigger: GTTTTCCAGCCTTCTCCTTCAGGAGGCACAGCAGGG...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCTTCTCCTGTTGGAGCTaGGCTGAGTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLFSCWS*AESSGC
Trigger: GCAGCCAGAGGACTCAGCTCAGCTCCAACAGGAGAA...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTATTCTCCTGTTGGAGCTaGGCTGAGTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVFSCWS*AESSGC
Trigger: GCAGCCAGAGGACTCAGCTCAGCTCCAACAGGAGAA...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTTCTCCTGTTGGAGCTaGGCTGAGTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKFSCWS*AESSGC
Trigger: GCAGCCAGAGGACTCAGCTCAGCTCCAACAGGAGAA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCTCCATGAACCACTTTaGGAAACAAGTCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQLHEPL*ETSPGS
Trigger: GGAACCTGGACTTGTTTCTCAAAGTGGTTCATGGAG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCACCAGGTCGTAGGGGGTaGCATCTCCATGAACCACTT +
Preference number: 4 (lower is better)
Translates to: KQEVQTGQVGRADHPLLAPGRRG*HLHEPL
Trigger: AAGTGGTTCATGGAGATGTCACCCCCTACGACCTGG...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGGCCCGGAACCGCTTaGTGGAGAACATGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRWPGTA*WRTCPE
Trigger: TTCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCGCTGCCTATCATTaGGGTATGAGTAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEGAAYH*GMSRAG
Trigger: GCCTGCTCTACTCATACCTCAATGATAGGCAGCGCC...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGACCAGCTGGTGCTACTaGATAGGGATGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRTSWCY*IGMLGL
Trigger: CAGTCCCAGCATCCCTATTCAGTAGCACCAGCTGGT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGAAGGCTTGGAGCTGGTaGCTCATGGTCGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWKAWSW*LMVARD
Trigger: ATCCCTGGCGACCATGAGTCACCAGCTCCAAGCCTT...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCCCTTCCTCACACTCTaGATGAGCCCCTTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTPFLTL*MSPLPP
Trigger: AGGAGGCAAGGGGCTCATTCAGAGTGTGAGGAAGGG...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR TCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGATCTTCTCTGCTCCATaGATGGGCCTGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWIFSAP*MGLSRP
Trigger: GGGCCTGCTCAGGCCCATTCATGGAGCAGAGAAGAT...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCACAGACTTGAGTGAGTaGCCTCCAGACCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGITDLSE*PPDLGK
Trigger: TTTCCCCAGGTCTGGAGGTCACTCACTCAAGTCTGT...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR GCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGCTGAGTCCTCTGGCTaGTCCGGAAGAGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTAESSG*SGRESS
Trigger: AGAGGATTCTCTTCCGGAGCAGCCAGAGGACTCAGC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCAGGTCCCAGAGGGCTaGCTCAATGCCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWQVPEG*LNASSN
Trigger: ATTGCTGCTGGCATTGAGGCAGCCCTCTGGGACCTG...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGTACCGGCCATTGGTaGCTTGTGTCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRCTGHW*LVSGPR
Trigger: TCTGGGACCTGACACAAGGCACCAATGGCCGGTACA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCTGTACCGGCCATTGGTaGCTTGTGTCAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTCTGHW*LVSGPR
Trigger: TCTGGGACCTGACACAAGGCACCAATGGCCGGTACA...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACACACGGCTCCTTCTGTTaGTGCTCAATGATATTCAGG +
Preference number: 4 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTHGSFC*CSMIFR
Trigger: CCTGAATATCATTGAGCAGCAACAGAAGGAGCCGTG...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCACGGCTCCTTCTGTTaGTGCTCAATGATATTCAGG +
Preference number: 4 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLHGSFC*CSMIFR
Trigger: CCTGAATATCATTGAGCAGCAACAGAAGGAGCCGTG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCTGGAGGCTGGAAGTCTaGACGGCTCCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTWRLEV*TAPSVA
Trigger: AGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCA...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGAAGTGGTGGTCATGCTaGCCCGTGGTGTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEKWWSC*PVVSSD
Trigger: ATCAGAGGACACCACGGGGCAGCATGACCACCACTT...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCAATGTTGGAGGGGATaGAGCCTGCCGAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWQCWRG*SLPSGS
Trigger: TGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTG...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCCAGCCCGTGGCGCTaGCTATCATTGAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLASPWR*LSLRYE
Trigger: CTCATACCTCAATGATAGGCAGCGCCACGGGCTGGC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCCTTGGAGCTATACTaGCCCTGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADPLELY*PCPGSA
Trigger: AGCAGAGCCAGGGCAGGGGCAGTATAGCTCCAAGGG...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCGGAGGCCAGCAGACCTaGTACAAAGTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTGGQQT*YKVSWG
Trigger: GCCCCAGGAAACTTTGTAGCAGGTCTGCTGGCCTCC...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR GCA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGGGGCAGCGAGTCCTTaGTCCAGCCTTCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: STANIVKQEVQTGQVGRAGAASP*SSLPLE
Trigger: TTCCAGGGGAAGGCTGGAGCAAGGACTCGCTGCCCC...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCTCTTCAGCCTCCATTaGGCCACTCTGGGAACATGC +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTLFSLH*ATLGTC
Trigger: GCATGTTCCCAGAGTGGCCCAATGGAGGCTGAAGAG...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCCCAATATACAGGGATaGCTTCTCCTGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGPNIQG*LLLLEL
Trigger: CAGCTCCAACAGGAGAAGCCATCCCTGTATATTGGG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGTCTTGTACCGGCCATTaGTGCCTTGTGTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRSCTGH*CLVSGP
Trigger: GGGACCTGACACAAGGCACCAATGGCCGGTACAAGA...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGATGGGCAGGGCCTGTaGGCTGCAGTCCATGAACAT +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLDGQGL*AAVHEH
Trigger: ATGTTCATGGACTGCAGCCCACAGGCCCTGCCCATC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGATGGGCAGGGCCTGTaGGCTGCAGTCCATGAACAT +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWDGQGL*AAVHEH
Trigger: ATGTTCATGGACTGCAGCCCACAGGCCCTGCCCATC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCAGTCCTTGCAGATGTaGCAGTTGGGGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGQSLQM*QLGSKK
Trigger: CTTCTTAGACCCCAACTGCCACATCTGCAAGGACTG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCACAACTCCCTGGTTTTaGGCATCTCTGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGITTPWF*ASLEQA
Trigger: TGCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGT...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTGTCCTGTGGTTCCGTaGGAGACAACTCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGICPVVP*ETTPWF
Trigger: AAACCAGGGAGTTGTCTCCCACGGAACCACAGGACA...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTGGCTGGGCAGATGCTaGCCAGAAGGTCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKWLGRC*PEGPRQ
Trigger: TTGTCTGGGACCTTCTGGCCAGCATCTGCCCAGCCA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTGGCTGGGCAGATGCTaGCCAGAAGGTCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVWLGRC*PEGPRQ
Trigger: TTGTCTGGGACCTTCTGGCCAGCATCTGCCCAGCCA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCAGCAGAGATTCCCCTTaGAGCTATACTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTSRDSP*SYTAPA
Trigger: GGCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCT...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGAGCAGAGATTCCCCTTaGAGCTATACTGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRSRDSP*SYTAPA
Trigger: GGCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTGGGGGATGGAGCTCTTaGTCTGGGGGCACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPGGWSS*SGGTVR
Trigger: CCTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCC...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTCAAAACCCCTGTTCTaGTGGGTAAGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGISKPLF*WVRRVR
Trigger: CCTGACCCTCCTTACCCACCAGAACAGGGGTTTTGA...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTTTCAAACAGGGCAGGTaGGTAGGGCTGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPFKQGR*VGLTIL
Trigger: GAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGTTCAAACAGGGCAGGTaGGTAGGGCTGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEFKQGR*VGLTIL
Trigger: GAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCCAGGTCGTAGGGGGTaGCATCTCCATGAACCACTT +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLPGRRG*HLHEPL
Trigger: AAGTGGTTCATGGAGATGTCACCCCCTACGACCTGG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGTGGCCCGGAACCGCTTaGTGGAGAACATGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLWPGTA*WRTCPE
Trigger: TTCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCA...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTGGCCCGGAACCGCTTaGTGGAGAACATGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVWPGTA*WRTCPE
Trigger: TTCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGGCGCTGCCTATCATTaGGGTATGAGTAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVGAAYH*GMSRAG
Trigger: GCCTGCTCTACTCATACCTCAATGATAGGCAGCGCC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGCAACAGACTTGAGTaGGTGACCTCCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVSNRLE*VTSRPG
Trigger: CCCAGGTCTGGAGGTCACTCACTCAAGTCTGTTGCT...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCACCAGCTGGTGCTACTaGATAGGGATGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLTSWCY*IGMLGL
Trigger: CAGTCCCAGCATCCCTATTCAGTAGCACCAGCTGGT...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTACCAGCTGGTGCTACTaGATAGGGATGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVTSWCY*IGMLGL
Trigger: CAGTCCCAGCATCCCTATTCAGTAGCACCAGCTGGT...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGACCAGCTGGTGCTACTaGATAGGGATGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKETSWCY*IGMLGL
Trigger: CAGTCCCAGCATCCCTATTCAGTAGCACCAGCTGGT...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGCTGAGTCCTCTGGCTaGTCCGGAAGAGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWAESSG*SGRESS
Trigger: AGAGGATTCTCTTCCGGAGCAGCCAGAGGACTCAGC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGGAACGGACAACAGTaGCCCGCACCCCAATATACA +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRWNGQQ*PAPQYT
Trigger: TGTATATTGGGGTGCGGGGCACTGTTGTCCGTTCCA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCGTCCATAGTACCTCCTaGATGGAACGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIVHSTS*MERTTV
Trigger: CACTGTTGTCCGTTCCATGCAGGAGGTACTATGGAC...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCTGGAGGCTGGAAGTCTaGACGGCTCCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLWRLEV*TAPSVA
Trigger: AGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCA...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGAGGCTGGAAGTCTaGACGGCTCCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWWRLEV*TAPSVA
Trigger: AGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCA...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGTGGAGGCTGGAAGTCTaGACGGCTCCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEWRLEV*TAPSVA
Trigger: AGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCA...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCAGTCCATGAACATCTaGGGTCCCACCAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVQSMNI*GPTRSS
Trigger: GGAGGATCTGGTGGGACCGCAGATGTTCATGGACTG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACAGTCCATGAACATCTaGGGTCCCACCAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVQSMNI*GPTRSS
Trigger: GGAGGATCTGGTGGGACCGCAGATGTTCATGGACTG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCAAGTGGTGGTCATGCTaGCCCGTGGTGTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLKWWSC*PVVSSD
Trigger: ATCAGAGGACACCACGGGGCAGCATGACCACCACTT...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGTTGGAGAGGGAGGTCTaGAAGGGCCTCCCAAGGACT +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLLEREV*KGLPRT
Trigger: AGTCCTTGGGAGGCCCTTGCAGACCTCCCTCTCCAA...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR GCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCACACAGCTTCTTGCTaGTCTGCAGAGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGHTASC*SAEACA
Trigger: AGCACAGGCCTCTGCAGAGCAGCAAGAAGCTGTGTG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCCTGAAGGAGAAGGCTaGAAAACCTGGCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEPEGEG*KTWHPA
Trigger: TGCTGGGTGCCAGGTTTTCCAGCCTTCTCCTTCAGG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCAGGGAACCGCTTCTTaGAGGGTAGAAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTQGTAS*RVEGVR
Trigger: TCTGACCCCTTCTACCCTCCAAGAAGCGGTTCCCTG...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACAGGGAACCGCTTCTTaGAGGGTAGAAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVQGTAS*RVEGVR
Trigger: TCTGACCCCTTCTACCCTCCAAGAAGCGGTTCCCTG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTTCCATTGGGCCACTCTaGGAACATGCAGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPSIGPL*EHAGSE
Trigger: CTCGGACCCTGCATGTTCCCAGAGTGGCCCAATGGA...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCTCTTCAGCCTCCATTaGGCCACTCTGGGAACATGC +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWLFSLH*ATLGTC
Trigger: GCATGTTCCCAGAGTGGCCCAATGGAGGCTGAAGAG...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCAGGCTGCGATACTTaGTCTTGTACCGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLAGCDT*SCTGHW
Trigger: CCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGCCTTGTGGGTCATTTTaGAGGCTGGAAGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEPCGSF*RLEVCT
Trigger: CGTGCAGACTTCCAGCCTCCAAAATGACCCACAAGG...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGTCCACTTCGCCCTTGTaGGTCATTTTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSESTSPL*VILEAG
Trigger: TCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGA...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGTTGGGGTCTAAGAAGTaGTGGTCATGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKELGSKK*WSCCPV
Trigger: CACGGGGCAGCATGACCACCACTTCTTAGACCCCAA...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTATTGGGGTCTAAGAAGTaGTGGTCATGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVLGSKK*WSCCPV
Trigger: CACGGGGCAGCATGACCACCACTTCTTAGACCCCAA...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTTTGGGGTCTAAGAAGTaGTGGTCATGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGLGSKK*WSCCPV
Trigger: CACGGGGCAGCATGACCACCACTTCTTAGACCCCAA...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTGCAGATGTGGCAGTTaGGGTCTAAGAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGICRCGS*GLRSGG
Trigger: ACCACCACTTCTTAGACCCCAACTGCCACATCTGCA...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCACAACTCCCTGGTTTTaGGCATCTCTGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTTTPWF*ASLEQA
Trigger: TGCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGT...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGACAACTCCCTGGTTTTaGGCATCTCTGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRTTPWF*ASLEQA
Trigger: TGCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGTGGGAGACAACTCCCTaGTTTTGGGCATCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRWETTP*FWASLE
Trigger: CTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCA...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTACGGTGGGCAGAGCCTaGACAAGCCGACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: STANIVKQEVQTGQVGRATVGRA*TSRQLC
Trigger: ACACAGCTGTCGGCTTGTCCAGGCTCTGCCCACCGT...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACTGGCTGGGCAGATGCTaGCCAGAAGGTCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADWLGRC*PEGPRQ
Trigger: TTGTCTGGGACCTTCTGGCCAGCATCTGCCCAGCCA...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGATGGAGCTCTTGGTCTaGGGGCACAGTAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWMELLV*GHSKAW
Trigger: CCAAGCCTTACTGTGCCCCCAGACCAAGAGCTCCAT...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGATGGAGCTCTTGGTCTaGGGGCACAGTAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEMELLV*GHSKAW
Trigger: CCAAGCCTTACTGTGCCCCCAGACCAAGAGCTCCAT...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCAAACCCCTGTTCTGGTaGGTAAGGAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTKPLFW*VRRVRP
Trigger: AGGCCTGACCCTCCTTACCCACCAGAACAGGGGTTT...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTAAACCCCTGTTCTGGTaGGTAAGGAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVKPLFW*VRRVRP
Trigger: AGGCCTGACCCTCCTTACCCACCAGAACAGGGGTTT...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTTCAAACAGGGCAGGTaGGTAGGGCTGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVFKQGR*VGLTIL
Trigger: GAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTTTCAAACAGGGCAGGTaGGTAGGGCTGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGFKQGR*VGLTIL
Trigger: GAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTCTGTCCACCTACCTaGGCCAAAAGCACAACACGG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLVCPPT*AKSTTR
Trigger: CCGTGTTGTGCTTTTGGCCCAGGTAGGTGGACAGAC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAGTCTGTCCACCTACCTaGGCCAAAAGCACAACACGG +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVVCPPT*AKSTTR
Trigger: CCGTGTTGTGCTTTTGGCCCAGGTAGGTGGACAGAC...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGGCCTGGCATGGAGCTaGCTCCTTCCATGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGGLAWS*LLPCSV
Trigger: TACAGAACATGGAAGGAGCCAGCTCCATGCCAGGCC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTCTGGCCTGTCCTGGTaGGAGTTGTCTGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKSGLSW*ELSELL
Trigger: CAGAAGCTCAGACAACTCCCACCAGGACAGGCCAGA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTCCTCTGGCCTGTCCTaGTGGGAGTTGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVSSGLS*WELSEL
Trigger: AAGCTCAGACAACTCCCACCAGGACAGGCCAGAGGA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCAGGTGAGGGTGAGCTaGCCTCCATCAAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPQVRVS*PPSSPL
Trigger: TAGAGGACTTGATGGAGGTCAGCTCACCCTCACCTG...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACAGCAACAGACTTGAGTaGGTGACCTCCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADSNRLE*VTSRPG
Trigger: CCCAGGTCTGGAGGTCACTCACTCAAGTCTGTTGCT...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCAGGGTCCCCTGCTGTaGCTCCTGAAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGQGPLL*LLKEKA
Trigger: AGCCTTCTCCTTCAGGAGGCACAGCAGGGGACCCTG...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTGGAACGGACAACAGTaGCCCGCACCCCAATATACA +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKWNGQQ*PAPQYT
Trigger: TGTATATTGGGGTGCGGGGCACTGTTGTCCGTTCCA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTCAGGTCCCAGAGGGCTaGCTCAATGCCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: STANIVKQEVQTGQVGRAQVPEG*LNASSN
Trigger: ATTGCTGCTGGCATTGAGGCAGCCCTCTGGGACCTG...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGAAGTGGTGGTCATGCTaGCCCGTGGTGTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLKWWSC*PVVSSD
Trigger: ATCAGAGGACACCACGGGGCAGCATGACCACCACTT...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACAAGAAGTGGTGGTCATaGTGCCCCGTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADKKWWS*CPVVSS
Trigger: AGAGGACACCACGGGGCAGCATGACCACCACTTCTT...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCACACAGCTTCTTGCTaGTCTGCAGAGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADHTASC*SAEACA
Trigger: AGCACAGGCCTCTGCAGAGCAGCAAGAAGCTGTGTG...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCCAATATACAGGGATaGCTTCTCCTGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTPNIQG*LLLLEL
Trigger: CAGCTCCAACAGGAGAAGCCATCCCTGTATATTGGG...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGCCCAATATACAGGGATaGCTTCTCCTGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRPNIQG*LLLLEL
Trigger: CAGCTCCAACAGGAGAAGCCATCCCTGTATATTGGG...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGATAGTACCTCCTGCATaGAACGGACAACAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKIVPPA*NGQQCP
Trigger: GGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTAT...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACTCTTGTACCGGCCATTaGTGCCTTGTGTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADSCTGH*CLVSGP
Trigger: GGGACCTGACACAAGGCACCAATGGCCGGTACAAGA...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGGTCATTTTGGAGGCTaGAAGTCTGCACGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKGHFGG*KSARLL
Trigger: AAGGAGCCGTGCAGACTTCCAGCCTCCAAAATGACC...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCCTTGTGGGTCATTTTaGAGGCTGGAAGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVPCGSF*RLEVCT
Trigger: CGTGCAGACTTCCAGCCTCCAAAATGACCCACAAGG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGGGTCTAAGAAGTGGTaGTCATGCTGCCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: STANIVKQEVQTGQVGRAGSKKW*SCCPVV
Trigger: CACCACGGGGCAGCATGACCACCACTTCTTAGACCC...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGCAGATGTGGCAGTTaGGGTCTAAGAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRCRCGS*GLRSGG
Trigger: ACCACCACTTCTTAGACCCCAACTGCCACATCTGCA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCTGCAGATGTGGCAGTTaGGGTCTAAGAAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTCRCGS*GLRSGG
Trigger: ACCACCACTTCTTAGACCCCAACTGCCACATCTGCA...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGCAGTCCTTGCAGATGTaGCAGTTGGGGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEQSLQM*QLGSKK
Trigger: CTTCTTAGACCCCAACTGCCACATCTGCAAGGACTG...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGGCTTAGGGCTTTCTaGAAGATATTGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRWLRAF*KILSPQ
Trigger: CTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCA...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGTGGCTTAGGGCTTTCTaGAAGATATTGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRWLRAF*KILSPQ
Trigger: CTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCA...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGGCAGGCATAGGAGTTTaGCTTAGGGCTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRAGIGV*LRAFWK
Trigger: CTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGC...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGTTTTGGGCATCTCTaGAGCAGGCATAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEGFGHL*SRHRSL
Trigger: CAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACC...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTGGGAGACAACTCCCTaGTTTTGGGCATCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKWETTP*FWASLE
Trigger: CTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCTGTCCTGTGGTTCCGTaGGAGACAACTCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLCPVVP*ETTPWF
Trigger: AAACCAGGGAGTTGTCTCCCACGGAACCACAGGACA...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTATGTCCTGTGGTTCCGTaGGAGACAACTCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVCPVVP*ETTPWF
Trigger: AAACCAGGGAGTTGTCTCCCACGGAACCACAGGACA...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGCGGCCTCCTGTCATCTaGCTGATAGTATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRRPPVI*LIVSLL
Trigger: GAGAAGAGATACTATCAGCCAGATGACAGGAGGCCG...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACGGCCTGGCATGGAGCTaGCTCCTTCCATGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADGLAWS*LLPCSV
Trigger: TACAGAACATGGAAGGAGCCAGCTCCATGCCAGGCC...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTTCCTCTGGCCTGTCCTaGTGGGAGTTGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPSSGLS*WELSEL
Trigger: AAGCTCAGACAACTCCCACCAGGACAGGCCAGAGGA...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGTGGGCTGGGTTCCTCTaGCCTGTCCTGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGWAGFL*PVLVGV
Trigger: AACTCCCACCAGGACAGGCCAGAGGAACCCAGCCCA...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGAACTTGTTCCTGTCGTaGGTGTTTCCCTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRNLFLS*VFPCRN
Trigger: GTTCCTGCAGGGAAACACCCACGACAGGAACAAGTT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS-3UTR TCA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCTCCATGAACCACTTTaGGAAACAAGTCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QASTLVRASKPLFWWVRRLHEPL*ETSPGS
Trigger: GGAACCTGGACTTGTTTCTCAAAGTGGTTCATGGAG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGGGGTGACATCTCCATaGACCACTTTGAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: KQEVQTGQVGRADHPLLAGVTSP*TTLRNK
Trigger: CTTGTTTCTCAAAGTGGTTCATGGAGATGTCACCCC...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGGGTGACATCTCCATaGACCACTTTGAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEGVTSP*TTLRNK
Trigger: CTTGTTTCTCAAAGTGGTTCATGGAGATGTCACCCC...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTCTGTTGCTGCTCAATaGTATTCAGGCCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGISVAAQ*YSGPFS
Trigger: AGAAAAGGGGCCTGAATATCATTGAGCAGCAACAGA...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGTGGTCCATGTCCCGCTaGATCTCCACTTCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGWSMSR*ISTSPL
Trigger: CAAGGGCGAAGTGGAGATTCAGCGGGACATGGACCA...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCCTATCATTGAGGTATaGGTAGAGCAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVPIIEV*VEQAAV
Trigger: AACTGCCGCCTGCTCTACTCATACCTCAATGATAGG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACCTATCATTGAGGTATaGGTAGAGCAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVPIIEV*VEQAAV
Trigger: AACTGCCGCCTGCTCTACTCATACCTCAATGATAGG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCTCTCCACCTTACTGTTaGAGGAGACCATCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSSPPYC*RRPSFE
Trigger: TTCAAAAGATGGTCTCCTTCAACAGTAAGGTGGAGA...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR GCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCGTCCATAGTACCTCCTaGATGGAACGGACAACAGTG +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLVHSTS*MERTTV
Trigger: CACTGTTGTCCGTTCCATGCAGGAGGTACTATGGAC...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGCTCCTTCTGTTGCTaGTCAATGATATTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLGSFCC*SMIFRP
Trigger: GGGCCTGAATATCATTGAGCAGCAACAGAAGGAGCC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCGGCTCCTTCTGTTGCTaGTCAATGATATTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLGSFCC*SMIFRP
Trigger: GGGCCTGAATATCATTGAGCAGCAACAGAAGGAGCC...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR GCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGGCTCCTTCTGTTGCTaGTCAATGATATTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGGSFCC*SMIFRP
Trigger: GGGCCTGAATATCATTGAGCAGCAACAGAAGGAGCC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGTGCCCTCGCCCAGGATaGTGCCAGTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGCPRPG*CQFSGS
Trigger: AGAGCCTGAAAACTGGCAGCATCCTGGGCGAGGGCA...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTCCTGAAGGAGAAGGCTaGAAAACCTGGCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: STANIVKQEVQTGQVGRAPEGEG*KTWHPA
Trigger: TGCTGGGTGCCAGGTTTTCCAGCCTTCTCCTTCAGG...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCAGTCCTTGCAGATGTaGCAGTTGGGGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLQSLQM*QLGSKK
Trigger: CTTCTTAGACCCCAACTGCCACATCTGCAAGGACTG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCAGTCCTTGCAGATGTaGCAGTTGGGGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEQSLQM*QLGSKK
Trigger: CTTCTTAGACCCCAACTGCCACATCTGCAAGGACTG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTTGGCTTAGGGCTTTCTaGAAGATATTGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVWLRAF*KILSPQ
Trigger: CTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCA...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGCAGGCATAGGAGTTTaGCTTAGGGCTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGAGIGV*LRAFWK
Trigger: CTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCGGCCTCCTGTCATCTaGCTGATAGTATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWRPPVI*LIVSLL
Trigger: GAGAAGAGATACTATCAGCCAGATGACAGGAGGCCG...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCGGCCTCCTGTCATCTaGCTGATAGTATCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKERPPVI*LIVSLL
Trigger: GAGAAGAGATACTATCAGCCAGATGACAGGAGGCCG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGTCTTCTGTCACACCCTaGAGAACTCATTCCACCGTC +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKESSVTP*RTHSTV
Trigger: GACGGTGGAATGAGTTCTCCAGGGTGTGACAGAAGA...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCTCCATGAACCACTTTaGGAAACAAGTCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTLHEPL*ETSPGS
Trigger: GGAACCTGGACTTGTTTCTCAAAGTGGTTCATGGAG...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCTCCATGAACCACTTTaGGAAACAAGTCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKELHEPL*ETSPGS
Trigger: GGAACCTGGACTTGTTTCTCAAAGTGGTTCATGGAG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTCTCCACCTTACTGTTaGAGGAGACCATCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGISPPYC*RRPSFE
Trigger: TTCAAAAGATGGTCTCCTTCAACAGTAAGGTGGAGA...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR GCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCACGGCTCCTTCTGTTaGTGCTCAATGATATTCAGG +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGHGSFC*CSMIFR
Trigger: CCTGAATATCATTGAGCAGCAACAGAAGGAGCCGTG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGACAAGCTTCACTCCATaGGGTATTTTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSETSFTP*GIFTSS
Trigger: GGAGGAAGTGAAAATACCCCATGGAGTGAAGCTTGT...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGGGTTTTGGGCATCTCTaGAGCAGGCATAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLGFGHL*SRHRSL
Trigger: CAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACC...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACGGTTTTGGGCATCTCTaGAGCAGGCATAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: TANIVKQEVQTGQVGRADGFGHL*SRHRSL
Trigger: CAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACC...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTTGGGAGACAACTCCCTaGTTTTGGGCATCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: STANIVKQEVQTGQVGRAWETTP*FWASLE
Trigger: CTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCA...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGAAACCTGGAGCCTCTTaGAGGTCAGAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGKPGAS*RSELSP
Trigger: AGGGGAGAGCTCTGACCTCCAAGAGGCTCCAGGTTT...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR CCA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGTCTTCTGTCACACCCTaGAGAACTCATTCCACCGTC +
Preference number: 4 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLSSVTP*RTHSTV
Trigger: GACGGTGGAATGAGTTCTCCAGGGTGTGACAGAAGA...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS-3UTR TCA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTGGGGTGACATCTCCATaGACCACTTTGAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPGVTSP*TTLRNK
Trigger: CTTGTTTCTCAAAGTGGTTCATGGAGATGTCACCCC...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTCTGTTGCTGCTCAATaGTATTCAGGCCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKSVAAQ*YSGPFS
Trigger: AGAAAAGGGGCCTGAATATCATTGAGCAGCAACAGA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTCTGTTGCTGCTCAATaGTATTCAGGCCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSLEQASTLVRASKPLFWSVAAQ*YSGPFS
Trigger: AGAAAAGGGGCCTGAATATCATTGAGCAGCAACAGA...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTATCTGTTGCTGCTCAATaGTATTCAGGCCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVSVAAQ*YSGPFS
Trigger: AGAAAAGGGGCCTGAATATCATTGAGCAGCAACAGA...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR TCA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGTCTCCACCTTACTGTTaGAGGAGACCATCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSESPPYC*RRPSFE
Trigger: TTCAAAAGATGGTCTCCTTCAACAGTAAGGTGGAGA...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCACAAGCTTCACTCCATaGGGTATTTTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLTSFTP*GIFTSS
Trigger: GGAGGAAGTGAAAATACCCCATGGAGTGAAGCTTGT...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTACAAGCTTCACTCCATaGGGTATTTTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVTSFTP*GIFTSS
Trigger: GGAGGAAGTGAAAATACCCCATGGAGTGAAGCTTGT...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGGGTCATTTTGGAGGCTaGAAGTCTGCACGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGGHFGG*KSARLL
Trigger: AAGGAGCCGTGCAGACTTCCAGCCTCCAAAATGACC...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR TCA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTTCTCCACCTTACTGTTaGAGGAGACCATCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGSPPYC*RRPSFE
Trigger: TTCAAAAGATGGTCTCCTTCAACAGTAAGGTGGAGA...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGGCAGGCATAGGAGTTTaGCTTAGGGCTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGAGIGV*LRAFWK
Trigger: CTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGC...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CCA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGTGCTACAAAGTTTCCTaGGGCAACTGTCATCTAAGA +
Preference number: 4 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLCYKVS*GNCHLR
Trigger: TCTTAGATGACAGTTGCCCCAGGAAACTTTGTAGCA...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTATGCTACAAAGTTTCCTaGGGCAACTGTCATCTAAGA +
Preference number: 4 (lower is better)
Translates to: LEQASTLVRASKPLFWWVCYKVS*GNCHLR
Trigger: TCTTAGATGACAGTTGCCCCAGGAAACTTTGTAGCA...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CCA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGATTTTCACTTCCTCCTaGGCTTCCCTGAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGIFTSS*ASLSFP
Trigger: GGGAAAACTCAGGGAAGCCCAGGAGGAAGTGAAAAT...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257100.7
CDS TCA 90 bp CTCGAAGGGCCTCCTTCCTGGGGATCTTCCTTCTGCTGCCAGCCCTaGCTCCGGGCCCAGAGCTTGCTCCCGGCCCATCTGGTGACAGGC +
Preference number: 5 (lower is better)
Translates to: LEGPPSWGSSFCCQP*LRAQSLLPAHLVTG
Trigger: GCCTGTCACCAGATGGGCCGGGAGCAAGCTCTGGGCCCGGAGTCAGGGCTGGCAGCAGAAGGAAGATCCCCAGGAAGGAGGCCCTTCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 90 bp GCCTCCTGGGCTGGGTTCCTCTGGCCTGTCCTGGTGGGAGTTGTCTaGGCTTCTGTCTGTGCCCCGGTCTTGGGCACAGGGCACTGGACC +
Preference number: 5 (lower is better)
Translates to: ASWAGFLWPVLVGVV*ASVCAPVLGTGHWT
Trigger: GGTCCAGTGCCCTGTGCCCAAGACCGGGGCACAGACAGAAGCTCAGACAACTCCCACCAGGACAGGCCAGAGGAACCCAGCCCAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360482.6
ENST00000485944.5
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCTCCGGGCCCAGAGCTaGCTCCCGGCCCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSLRAQS*LPAHLV
Trigger: CACCAGATGGGCCGGGAGCAAGCTCTGGGCCCGGAG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 90 bp GTGCTCCACAGAGGCCAGCCCGTGGCGCTGCCTATCATTGAGGTATaGGTAGAGCAGGCGGCAGTTCTGGGTGTCCCGGGCCCCATGTGG +
Preference number: 5 (lower is better)
Translates to: VLHRGQPVALPIIEV*VEQAAVLGVPGPMW
Trigger: CCACATGGGGCCCGGGACACCCAGAACTGCCGCCTGCTCTACTCATACCTCAATGATAGGCAGCGCCACGGGCTGGCCTCTGTGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS TCA 90 bp TCCCCATGTGCTCCACAGAGGCCAGCCCGTGGCGCTGCCTATCATTaGGGTATGAGTAGAGCAGGCGGCAGTTCTGGGTGTCCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: SPCAPQRPARGAAYH*GMSRAGGSSGCPGP
Trigger: GGGCCCGGGACACCCAGAACTGCCGCCTGCTCTACTCATACCTCAATGATAGGCAGCGCCACGGGCTGGCCTCTGTGGAGCACATGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS GCA 90 bp CTGGGCAGATGCTGGCCAGAAGGTCCCAGACAATGTTGGAGGGGATaGAGCCTGCCGAGCGGATCACGGTGGGCAGAGCCTGGACAAGCC +
Preference number: 5 (lower is better)
Translates to: LGRCWPEGPRQCWRG*SLPSGSRWAEPGQA
Trigger: GGCTTGTCCAGGCTCTGCCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTGGCCAGCATCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS GCA 90 bp TGGCCTTCATCGCTGCCAGTCCGCACGACACACACAGCTTCTTGCTaGTCTGCAGAGGCCTGTGCTGACGCCCCCAGGCACAGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: WPSSLPVRTTHTASC*SAEACADAPRHSAA
Trigger: CGCAGCACTGTGCCTGGGGGCGTCAGCACAGGCCTCTGCAGAGCAGCAAGAAGCTGTGTGTGTCGTGCGGACTGGCAGCGATGAAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CCA 90 bp TGGCCTTGGCTGGGCAGATGCTGGCCAGAAGGTCCCAGACAATGTTaGAGGGGATGCAGCCTGCCGAGCGGATCACGGTGGGCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: WPWLGRCWPEGPRQC*RGCSLPSGSRWAEP
Trigger: AGGCTCTGCCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTGGCCAGCATCTGCCCAGCCAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 90 bp TCCAGTCTGGGGCAGCCTCCTGGGCTGGGTTCCTCTGGCCTGTCCTaGTGGGAGTTGTCTGAGCTTCTGTCTGTGCCCCGGTCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSLGQPPGLGSSGLS*WELSELLSVPRSWA
Trigger: TGCCCAAGACCGGGGCACAGACAGAAGCTCAGACAACTCCCACCAGGACAGGCCAGAGGAACCCAGCCCAGGAGGCTGCCCCAGACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360482.6
ENST00000485944.5
ENST00000533231.5
CDS-3UTR CAA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCGGGGGCAGCGAGTCCTaGCTCCAGCCTTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLGGSES*LQPSPG
Trigger: TCCAGGGGAAGGCTGGAGCAAGGACTCGCTGCCCCC...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 90 bp GGGATGGAGCTCTTGGTCTGGGGGCACAGTAAGGCTTGGAGCTGGTaGCTCATGGTCGCCAGGGATTCGAGGTGCCGGAGCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GMELLVWGHSKAWSW*LMVARDSRCRSRAW
Trigger: CCAAGCCCTGCTCCGGCACCTCGAATCCCTGGCGACCATGAGTCACCAGCTCCAAGCCTTACTGTGCCCCCAGACCAAGAGCTCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS GCA 90 bp GATGCTGGCCAGAAGGTCCCAGACAATGTTGGAGGGGATGCAGCCTaGCGAGCGGATCACGGTGGGCAGAGCCTGGACAAGCCGACAGCT +
Preference number: 5 (lower is better)
Translates to: DAGQKVPDNVGGDAA*RADHGGQSLDKPTA
Trigger: AGCTGTCGGCTTGTCCAGGCTCTGCCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTGGCCAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 90 bp GTGGGCAGAGCCTGGACAAGCCGACAGCTGTGTCCCGAGACCAGCTaGGCCCTGGCCCGGAACCGCTTGATGGAGAACATGTCCAGAACA +
Preference number: 5 (lower is better)
Translates to: VGRAWTSRQLCPETS*ALARNRLMENMSRT
Trigger: TGTTCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCAGGGCCCAGCTGGTCTCGGGACACAGCTGTCGGCTTGTCCAGGCTCTGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 90 bp AGCTCTTGGTCTGGGGGCACAGTAAGGCTTGGAGCTGGTGACTCATaGTCGCCAGGGATTCGAGGTGCCGGAGCAGGGCTTGGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: SSWSGGTVRLGAGDS*SPGIRGAGAGLGGD
Trigger: GTCCCCACCAAGCCCTGCTCCGGCACCTCGAATCCCTGGCGACCATGAGTCACCAGCTCCAAGCCTTACTGTGCCCCCAGACCAAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 90 bp GTTGGCTTCCCAGGTCTGAGGACAAGTTCCAGGAGGCCCTCTGGATaGACTGCCAGGGTGCCGGGTGGTTCCCTGCCTGGAGCATCCCTA +
Preference number: 5 (lower is better)
Translates to: VGFPGLRTSSRRPSG*TARVPGGSLPGASL
Trigger: TAGGGATGCTCCAGGCAGGGAACCACCCGGCACCCTGGCAGTCCATCCAGAGGGCCTCCTGGAACTTGTCCTCAGACCTGGGAAGCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS-3UTR CAA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCCGGCCATTGGTGCCTaGTGTCAGGTCCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSPAIGA*CQVPEG
Trigger: GCCCTCTGGGACCTGACACAAGGCACCAATGGCCGG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS GCA 90 bp CTGGCTCTCCAGGCCCAGACCCAGTGTCTTTTGGAGAGGGAGGTCTaGAAGGGCCTCCCAAGGACTCCAGGTCAGCAACTTGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: LALQAQTQCLLEREV*KGLPRTPGQQLGEG
Trigger: ACCCTCCCCAAGTTGCTGACCTGGAGTCCTTGGGAGGCCCTTGCAGACCTCCCTCTCCAAAAGACACTGGGTCTGGGCCTGGAGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS GCA 90 bp CTTCCCAGGTCTGAGGACAAGTTCCAGGAGGCCCTCTGGATGGACTaGCAGGGTGCCGGGTGGTTCCCTGCCTGGAGCATCCCTAAACCA +
Preference number: 5 (lower is better)
Translates to: LPRSEDKFQEALWMD*QGAGWFPAWSIPKP
Trigger: TGGTTTAGGGATGCTCCAGGCAGGGAACCACCCGGCACCCTGGCAGTCCATCCAGAGGGCCTCCTGGAACTTGTCCTCAGACCTGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS GCA 90 bp CAGTGCTATGTCTGTTGCACCAGGTGGTGGCCTCCCCCTCAACCCTaGTGGGTTATCCACCTCCCTGCTCCCAACCCCACACCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: QCYVCCTRWWPPPQP*WVIHLPAPNPTPVL
Trigger: CAGGACAGGTGTGGGGTTGGGAGCAGGGAGGTGGATAACCCAGCAGGGTTGAGGGGGAGGCCACCACCTGGTGCAACAGACATAGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS GCA 90 bp CCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTGGTGGTCATGCTaGCCCGTGGTGTCCTCTGATGCGATGGGCAGGGCCTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PLQMWQLGSKKWWSC*PVVSSDAMGRACGL
Trigger: CAGCCCACAGGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532604.5
CDS GCA 90 bp CCACCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTGGTGGTCATaGTGCCCCGTGGTGTCCTCTGATGCGATGGGCAGGGCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PPLQMWQLGSKKWWS*CPVVSSDAMGRACG
Trigger: CCCACAGGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532604.5
CDS CCA 90 bp GGCTCCCAGTCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTGGTaGTCATGCTGCCCCGTGGTGTCCTCTGATGCGATGGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSQSLQMWQLGSKKW*SCCPVVSSDAMGRA
Trigger: GGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGACTGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 90 bp TGCTATGTCTGTTGCACCAGGTGGTGGCCTCCCCCTCAACCCTGCTaGGTTATCCACCTCCCTGCTCCCAACCCCACACCTGTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: CYVCCTRWWPPPQPC*VIHLPAPNPTPVLW
Trigger: CCACAGGACAGGTGTGGGGTTGGGAGCAGGGAGGTGGATAACCCAGCAGGGTTGAGGGGGAGGCCACCACCTGGTGCAACAGACATAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS-3UTR CAA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCGAGGGCTCCCAGTCCTaGCAGATGTGGCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLEGSQS*QMWQLG
Trigger: CCCCAACTGCCACATCTGCAAGGACTGGGAGCCCTC...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTTGTCCCCGCAGCTCTaGGCGGCTTCGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLLSPQL*AASKEP
Trigger: AGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAA...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGTGCCGGAGCAGGGCTaGGTGGGGACAGGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSVPEQG*VGTGVP
Trigger: AGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCAC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS GCA 90 bp TCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTGGTGGTCATGCTaGCCCGTGGTGTCCTCTGATGCGATGGGCAGGGCCTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLQMWQLGSKKWWSC*PVVSSDAMGRACGL
Trigger: CAGCCCACAGGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS GCA 90 bp CAGTCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTGGTGGTCATaGTGCCCCGTGGTGTCCTCTGATGCGATGGGCAGGGCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QSLQMWQLGSKKWWS*CPVVSSDAMGRACG
Trigger: CCCACAGGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 90 bp AGATGTGGCAGTTGGGGTCTAAGAAGTGGTGGTCATGCTGCCCCGTaGTGTCCTCTGATGCGATGGGCAGGGCCTGTGGGCTGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: RCGSWGLRSGGHAAP*CPLMRWAGPVGCSP
Trigger: TGGACTGCAGCCCACAGGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000532604.5
ENST00000533231.5
CDS CCA 90 bp GAGGGCTCCCAGTCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTaGTGGTCATGCTGCCCCGTGGTGTCCTCTGATGCGATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: EGSQSLQMWQLGSKK*WSCCPVVSSDAMGR
Trigger: CCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGACTGGGAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 90 bp AGGGGGCTCCTCTTTGCTGAGTGTGGGGCTTCTTCTGTCACACCCTaGAGAACTCATTCCACCGTCTCTGGCCTCCCTGGGCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: RGLLFAECGASSVTP*RTHSTVSGLPGPEA
Trigger: TGCCTCAGGCCCAGGGAGGCCAGAGACGGTGGAATGAGTTCTCCAGGGTGTGACAGAAGAAGCCCCACACTCAGCAAAGAGGAGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CCA 90 bp AGGCCACACAGGAAAAGCCAGTGCTATGTCTGTTGCACCAGGTGGTaGCCTCCCCCTCAACCCTGCTGGGTTATCCACCTCCCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: RPHRKSQCYVCCTRW*PPPQPCWVIHLPAP
Trigger: GGGAGCAGGGAGGTGGATAACCCAGCAGGGTTGAGGGGGAGGCCACCACCTGGTGCAACAGACATAGCACTGGCTTTTCCTGTGTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS-3UTR CAA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCACCACGCAGACGTCCTaGGCCTTGGCTGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLTTQTS*ALAGQM
Trigger: CATCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGGT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACATCTGGAAGCCCTTCCTaGGGGAGCAGCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTSGSPS*GSSTAS
Trigger: GCTGGCTGTGCTGCTCCCCAAGGAAGGGCTTCCAGA...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCCGGGGGATGGAGCTCTaGGTCTGGGGGCACAGTAAG +
Preference number: 5 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLRGMEL*VWGHSK
Trigger: CTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCCG...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCGGGGGCAGCGAGTCCTaGCTCCAGCCTTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIGGSES*LQPSPG
Trigger: TCCAGGGGAAGGCTGGAGCAAGGACTCGCTGCCCCC...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 90 bp GCCAAGAGCCCTAGACTATTGTCACTCCCGTTGGCTTCCCAGGTCTaGGGACAAGTTCCAGGAGGCCCTCTGGATGGACTGCCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: AKSPRLLSLPLASQV*GQVPGGPLDGLPGC
Trigger: GCACCCTGGCAGTCCATCCAGAGGGCCTCCTGGAACTTGTCCTCAGACCTGGGAAGCCAACGGGAGTGACAATAGTCTAGGGCTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS TCA 90 bp TTCGTGCCCATAACCCTTCTCGTCTCTCTCCCATCGGTCCCGTTCTaGAAGGCGCCCCACCCAGGTTCCCAAGCCTTACTGGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: FVPITLLVSLPSVPF*KAPHPGSQALLGQS
Trigger: GGACTGTCCCAGTAAGGCTTGGGAACCTGGGTGGGGCGCCTTTCAGAACGGGACCGATGGGAGAGAGACGAGAAGGGTTATGGGCACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525930.1
ENST00000529396.1
CDS CCA 90 bp CTGGGTCTGGGAGCTCCCGAAGGCGAGTCCATAGTACCTCCTGCATaGAACGGACAACAGTGCCCCGCACCCCAATATACAGGGATGGCT +
Preference number: 5 (lower is better)
Translates to: LGLGAPEGESIVPPA*NGQQCPAPQYTGMA
Trigger: AGCCATCCCTGTATATTGGGGTGCGGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTATGGACTCGCCTTCGGGAGCTCCCAGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000531039.5
ENST00000533231.5
CDS CCA 90 bp TGCTGGGTTATCCACCTCCCTGCTCCCAACCCCACACCTGTCCTGTaGTTCCGTGGGAGACAACTCCCTGGTTTTGGGCATCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CWVIHLPAPNPTPVL*FRGRQLPGFGHLWS
Trigger: GCTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCACGGAACCACAGGACAGGTGTGGGGTTGGGAGCAGGGAGGTGGATAACCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS CCA 90 bp CCAAGGCCACACAGGAAAAGCCAGTGCTATGTCTGTTGCACCAGGTaGTGGCCTCCCCCTCAACCCTGCTGGGTTATCCACCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: PRPHRKSQCYVCCTR*WPPPQPCWVIHLPA
Trigger: AGCAGGGAGGTGGATAACCCAGCAGGGTTGAGGGGGAGGCCACCACCTGGTGCAACAGACATAGCACTGGCTTTTCCTGTGTGGCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCTGGGGTCCCGCAGGTaGAACAGCAGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGLGSRR*NSRLRY
Trigger: GTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCAG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCGAGGGCTCCCAGTCCTaGCAGATGTGGCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVEGSQS*QMWQLG
Trigger: CCCCAACTGCCACATCTGCAAGGACTGGGAGCCCTC...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CAA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCGAGGGCTCCCAGTCCTaGCAGATGTGGCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSEGSQS*QMWQLG
Trigger: CCCCAACTGCCACATCTGCAAGGACTGGGAGCCCTC...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CAA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCCTGGCCCGGAACCGCTaGATGGAGAACATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLLARNR*MENMSR
Trigger: TCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCAG...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTCTGGCCCGGAACCGCTaGATGGAGAACATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSLARNR*MENMSR
Trigger: TCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCAG...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCAGGTCCCAGACAATGTaGGAGGGGATGCAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLRSQTM*EGMQPA
Trigger: GGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCTCTGGAAGCCCTTCCTaGGGGAGCAGCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGSGSPS*GSSTAS
Trigger: GCTGGCTGTGCTGCTCCCCAAGGAAGGGCTTCCAGA...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCGGGGGATGGAGCTCTaGGTCTGGGGGCACAGTAAG +
Preference number: 5 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSRGMEL*VWGHSK
Trigger: CTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCCG...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCGGGGGATGGAGCTCTaGGTCTGGGGGCACAGTAAG +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGRGMEL*VWGHSK
Trigger: CTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCCG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCTCCGGGCCCAGAGCTaGCTCCCGGCCCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: LSLEQASTLVRASKPLFWLRAQS*LPAHLV
Trigger: CACCAGATGGGCCGGGAGCAAGCTCTGGGCCCGGAG...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGAAACCTGGAGCCTCTaGGAGGTCAGAGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTETWSL*EVRALP
Trigger: GGGGAGAGCTCTGACCTCCAAGAGGCTCCAGGTTTC...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCGACACACACAGCTTCTaGCTGCTCTGCAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QTGQVGRADHPLLAVPPLDTHSF*LLCRGL
Trigger: CAGGCCTCTGCAGAGCAGCAAGAAGCTGTGTGTGTC...GAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 90 bp CAGGTTCTTAGTGCCCTTGGATCTTCTCTGCTCCATGAATGGGCCTaGGCAGGCCCTGCTGGCTTCAGTATCCAGGGAGGAGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QVLSALGSSLLHEWA*AGPAGFSIQGGAEA
Trigger: GGCCTCAGCTCCTCCCTGGATACTGAAGCCAGCAGGGCCTGCTCAGGCCCATTCATGGAGCAGAGAAGATCCAAGGGCACTAAGAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 90 bp TGTCCCCGTTTTATCACAAACAAGGTGGGCCTCAGAGCAGTCAGGTaGCATGCCCAAGACCACACTGCTGGTGAGGCGAGGCGTGGGACC +
Preference number: 5 (lower is better)
Translates to: CPRFITNKVGLRAVR*HAQDHTAGEARRGT
Trigger: GGTCCCACGCCTCGCCTCACCAGCAGTGTGGTCTTGGGCATGTCACCTGACTGCTCTGAGGCCCACCTTGTTTGTGATAAAACGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 90 bp CGGGCCCAGAGCTTGCTCCCGGCCCATCTGGTGACAGGCCTGGCATaGAGCTGGCTCCTTCCATGTTCTGTAAAAGCTCACAGTTGTGTT +
Preference number: 5 (lower is better)
Translates to: RAQSLLPAHLVTGLA*SWLLPCSVKAHSCV
Trigger: AACACAACTGTGAGCTTTTACAGAACATGGAAGGAGCCAGCTCCATGCCAGGCCTGTCACCAGATGGGCCGGGAGCAAGCTCTGGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCCGGCCATTGGTGCCTaGTGTCAGGTCCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: QASTLVRASKPLFWWVRRPAIGA*CQVPEG
Trigger: GCCCTCTGGGACCTGACACAAGGCACCAATGGCCGG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGTCTTGTACCGGCCATaGGTGCCTTGTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQVLYRP*VPCVRS
Trigger: GGACCTGACACAAGGCACCAATGGCCGGTACAAGAC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGCCCGGAACCGCTaGATGGAGAACATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSLARNR*MENMSR
Trigger: TCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCAG...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGTGCCGGAGCAGGGCTaGGTGGGGACAGGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEVPEQG*VGTGVP
Trigger: AGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCAC...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAGTGCCGGAGCAGGGCTaGGTGGGGACAGGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: LEQASTLVRASKPLFWWVVPEQG*VGTGVP
Trigger: AGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCAC...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGTGCCGGAGCAGGGCTaGGTGGGGACAGGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: LSLEQASTLVRASKPLFWVPEQG*VGTGVP
Trigger: AGGGACTCCTGTCCCCACCAAGCCCTGCTCCGGCAC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCGGGGGATGGAGCTCTaGGTCTGGGGGCACAGTAAG +
Preference number: 5 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIRGMEL*VWGHSK
Trigger: CTTACTGTGCCCCCAGACCAAGAGCTCCATCCCCCG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCGAAACCTGGAGCCTCTaGGAGGTCAGAGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGETWSL*EVRALP
Trigger: GGGGAGAGCTCTGACCTCCAAGAGGCTCCAGGTTTC...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTAGGGTCTGGGCCAACTaGTTCCTGTCGTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSRVWAN*FLSWVF
Trigger: AAACACCCACGACAGGAACAAGTTGGCCCAGACCCT...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS TCA 90 bp GGTCCCACCAGATCCTCCAGGGTCAGTGTCTGGTCCATGTCCCGCTaGATCTCCACTTCGCCCTTGTGGGTCATTTTGGAGGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: GPTRSSRVSVWSMSR*ISTSPLWVILEAGS
Trigger: ACTTCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGATTCAGCGGGACATGGACCAGACACTGACCCTGGAGGATCTGGTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000531039.5
ENST00000533231.5
CDS GCA 90 bp CCCGAAGGCGAGTCCATAGTACCTCCTGCATGGAACGGACAACAGTaGCCCGCACCCCAATATACAGGGATGGCTTCTCCTGTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PEGESIVPPAWNGQQ*PAPQYTGMASPVGA
Trigger: AGCTCCAACAGGAGAAGCCATCCCTGTATATTGGGGTGCGGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTATGGACTCGCCTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000531039.5
ENST00000533231.5
CDS GCA 90 bp AAGACTTGCCCAAGGCCACACAGGAAAAGCCAGTGCTATGTCTGTTaGACCAGGTGGTGGCCTCCCCCTCAACCCTGCTGGGTTATCCAC +
Preference number: 5 (lower is better)
Translates to: KTCPRPHRKSQCYVC*TRWWPPPQPCWVIH
Trigger: GTGGATAACCCAGCAGGGTTGAGGGGGAGGCCACCACCTGGTGCAACAGACATAGCACTGGCTTTTCCTGTGTGGCCTTGGGCAAGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS CCA 90 bp CTGTCCTGGTGGGAGTTGTCTGAGCTTCTGTCTGTGCCCCGGTCTTaGGCACAGGGCACTGGACCTTTCTTCAGGTTCTTAGTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSWWELSELLSVPRS*AQGTGPFFRFLVPL
Trigger: CAAGGGCACTAAGAACCTGAAGAAAGGTCCAGTGCCCTGTGCCCAAGACCGGGGCACAGACAGAAGCTCAGACAACTCCCACCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360482.6
ENST00000485944.5
ENST00000533231.5
CDS CCA 90 bp AGCAGATCCTCAGCGCCAAGAGCCCTAGACTATTGTCACTCCCGTTaGCTTCCCAGGTCTGAGGACAAGTTCCAGGAGGCCCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: SRSSAPRALDYCHSR*LPRSEDKFQEALWM
Trigger: CATCCAGAGGGCCTCCTGGAACTTGTCCTCAGACCTGGGAAGCCAACGGGAGTGACAATAGTCTAGGGCTCTTGGCGCTGAGGATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS-3UTR CAA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCTGCGATACTTGGTCTaGTACCGGCCATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQLRYLV*YRPLVP
Trigger: AGGCACCAATGGCCGGTACAAGACCAAGTATCGCAG...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTAGCAGGCTGCGATACTaGGTCTTGTACCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSSRLRY*VLYRPL
Trigger: CAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCT...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCCCTTGTGGGTCATTTaGGAGGCTGGAAGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KQGRWVGLTILSLQSHLSPLWVI*EAGSLH
Trigger: GTGCAGACTTCCAGCCTCCAAAATGACCCACAAGGG...AGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGAGGGCTCCCAGTCCTaGCAGATGTGGCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPEGSQS*QMWQLG
Trigger: CCCCAACTGCCACATCTGCAAGGACTGGGAGCCCTC...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCTGGCCCGGAACCGCTaGATGGAGAACATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGLARNR*MENMSR
Trigger: TCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCAG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGACCACGCAGACGTCCTaGGCCTTGGCTGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: QASTLVRASKPLFWWVRRTTQTS*ALAGQM
Trigger: CATCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGGT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCATCTGGAAGCCCTTCCTaGGGGAGCAGCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: KQEVQTGQVGRADHPLLASGSPS*GSSTAS
Trigger: GCTGGCTGTGCTGCTCCCCAAGGAAGGGCTTCCAGA...TGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAAAGCAGAGATTCCCCTaGGAGCTATACTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTKQRFP*ELYCPC
Trigger: GCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCTT...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCTGACCATCCTCTCCTaGCAGTCCCACCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RKFKQGRWVGLTILSLQSLTILS*QSHLSL
Trigger: CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAG...GGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS TCA 90 bp CAGGAGTCTCTCTCCCAGTTCTCACACTGCGCAAGGAGCAGATACTaGACGGGGTTCGTGCCCATAACCCTTCTCGTCTCTCTCCCATCG +
Preference number: 5 (lower is better)
Translates to: QESLSQFSHCARSRY*TGFVPITLLVSLPS
Trigger: CGATGGGAGAGAGACGAGAAGGGTTATGGGCACGAACCCCGTTCAGTATCTGCTCCTTGCGCAGTGTGAGAACTGGGAGAGAGACTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525930.1
ENST00000529396.1
CDS CCA 90 bp GAGTTTGGCTTAGGGCTTTCTGGAAGATATTGTCCCCGCAGCTCTTaGCGGCTTCGAAGGAGCCTAGCAGCTCATTCGAGGGCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: EFGLGLSGRYCPRSS*RLRRSLAAHSRAPS
Trigger: ACTGGGAGCCCTCGAATGAGCTGCTAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS-3UTR CAA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTCCAGGGAACCGCTTCTaGGAGGGTAGAAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPPGNRF*EGRRGQ
Trigger: CTGACCCCTTCTACCCTCCAAGAAGCGGTTCCCTGG...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCGGCCATTGGTGCCTaGTGTCAGGTCCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: TANIVKQEVQTGQVGRADPAIGA*CQVPEG
Trigger: GCCCTCTGGGACCTGACACAAGGCACCAATGGCCGG...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCAGCAGGCTGCGATACTaGGTCTTGTACCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGSRLRY*VLYRPL
Trigger: CAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCT...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGCTGGGGTCCCGCAGGTaGAACAGCAGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKLGSRR*NSRLRY
Trigger: GTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCAG...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCTGGGGTCCCGCAGGTaGAACAGCAGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGLGSRR*NSRLRY
Trigger: GTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCAG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACTGGGGTCCCGCAGGTaGAACAGCAGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: LEQASTLVRASKPLFWWVLGSRR*NSRLRY
Trigger: GTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCAG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGCACGGCTCCTTCTGTaGCTGCTCAATGATATTCAG +
Preference number: 5 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSARLLL*LLNDIQ
Trigger: CTGAATATCATTGAGCAGCAACAGAAGGAGCCGTGC...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCCTTGTGGGTCATTTaGGAGGCTGGAAGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: QEVQTGQVGRADHPLLAVPLWVI*EAGSLH
Trigger: GTGCAGACTTCCAGCCTCCAAAATGACCCACAAGGG...GACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
CDS-3UTR CAA 90 bp TTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCATCTCCACTTCGCCCTaGTGGGTCATTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: FKQGRWVGLTILSLQSHLISTSP*WVILEA
Trigger: AGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGAT...GAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGTTGTCCCCGCAGCTCTaGGCGGCTTCGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKLSPQL*AASKEP
Trigger: AGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAA...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTTGTCCCCGCAGCTCTaGGCGGCTTCGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LSLEQASTLVRASKPLFWLSPQL*AASKEP
Trigger: AGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAA...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGTTGTCCCCGCAGCTCTaGGCGGCTTCGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLLSPQL*AASKEP
Trigger: AGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAA...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGAGGTCCCAGACAATGTaGGAGGGGATGCAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: QASTLVRASKPLFWWVRRRSQTM*EGMQPA
Trigger: GGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCT...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAACCACGCAGACGTCCTaGGCCTTGGCTGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: LEQASTLVRASKPLFWWVTTQTS*ALAGQM
Trigger: CATCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGGT...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGACCACGCAGACGTCCTaGGCCTTGGCTGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKTTQTS*ALAGQM
Trigger: CATCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGGT...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGAAGGAGACCATCTTTaGAACCTTCCCCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQEGDHL*NLPQPG
Trigger: CCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTTC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCTCCAGGTCAGCAACTaGGGGAGGGTCTCCCACAGA +
Preference number: 5 (lower is better)
Translates to: QASTLVRASKPLFWWVRRLQVSN*GRVSHR
Trigger: TCTGTGGGAGACCCTCCCCAAGTTGCTGACCTGGAG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCCTGTCCTGGTGGGAGTaGTCTGAGCTTCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGLSWWE*SELLSV
Trigger: CACAGACAGAAGCTCAGACAACTCCCACCAGGACAG...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS GCA 90 bp GGCACTGGACCTTTCTTCAGGTTCTTAGTGCCCTTGGATCTTCTCTaGTCCATGAATGGGCCTGAGCAGGCCCTGCTGGCTTCAGTATCC +
Preference number: 5 (lower is better)
Translates to: GTGPFFRFLVPLDLL*SMNGPEQALLASVS
Trigger: GGATACTGAAGCCAGCAGGGCCTGCTCAGGCCCATTCATGGAGCAGAGAAGATCCAAGGGCACTAAGAACCTGAAGAAAGGTCCAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS GCA 90 bp TCGTTCCTTCCATCTGAAAAAGTCACTGCCTGGAACAGCGCAGCCTaGTGCTTCCCAGCAGAGATCTGGGCAGAATGCCAGGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: SFLPSEKVTAWNSAA*CFPAEIWAECQVGD
Trigger: ATCCCCAACCTGGCATTCTGCCCAGATCTCTGCTGGGAAGCAGCAGGCTGCGCTGTTCCAGGCAGTGACTTTTTCAGATGGAAGGAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 90 bp TTGGGCATCTCTGGAGCAGGCATAGGAGTTTGGCTTAGGGCTTTCTaGAAGATATTGTCCCCGCAGCTCTTGGCGGCTTCGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LGISGAGIGVWLRAF*KILSPQLLAASKEP
Trigger: AGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGCTCCAGAGATGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 90 bp ATGGAGCTGGCTCCTTCCATGTTCTGTAAAAGCTCACAGTTGTGTTaGGGACTGAGCACAGGGTCTCCTGTGCTGGGGCCTTCTACGTCC +
Preference number: 5 (lower is better)
Translates to: MELAPSMFCKSSQLC*GLSTGSPVLGPSTS
Trigger: GGACGTAGAAGGCCCCAGCACAGGAGACCCTGTGCTCAGTCCCCAACACAACTGTGAGCTTTTACAGAACATGGAAGGAGCCAGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCCCAGGGAACCGCTTCTaGGAGGGTAGAAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTPGNRF*EGRRGQ
Trigger: CTGACCCCTTCTACCCTCCAAGAAGCGGTTCCCTGG...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCCAGGGAACCGCTTCTaGGAGGGTAGAAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: LSLEQASTLVRASKPLFWPGNRF*EGRRGQ
Trigger: CTGACCCCTTCTACCCTCCAAGAAGCGGTTCCCTGG...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTCTTGTACCGGCCATaGGTGCCTTGTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VPPLSGTGFNTSEGIKTPVLYRP*VPCVRS
Trigger: GGACCTGACACAAGGCACCAATGGCCGGTACAAGAC...AGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCACGGCTCCTTCTGTaGCTGCTCAATGATATTCAG +
Preference number: 5 (lower is better)
Translates to: RWVGLTILSLQSHLSLEQARLLL*LLNDIQ
Trigger: CTGAATATCATTGAGCAGCAACAGAAGGAGCCGTGC...CTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGCACGGCTCCTTCTGTaGCTGCTCAATGATATTCAG +
Preference number: 5 (lower is better)
Translates to: QVGRADHPLLAVPPLSGTARLLL*LLNDIQ
Trigger: CTGAATATCATTGAGCAGCAACAGAAGGAGCCGTGC...TGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCTCCACTTCGCCCTaGTGGGTCATTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PLLAVPPLSGTGFNTSEGISTSP*WVILEA
Trigger: AGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGAT...GCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGACAACTCCCTGGTTTaGGGCATCTCTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTDNSLV*GISGAG
Trigger: GCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGACAACTCCCTGGTTTaGGGCATCTCTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: HPLLAVPPLSGTGFNTSEDNSLV*GISGAG
Trigger: GCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTC...CTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCAGGTCCCAGACAATGTaGGAGGGGATGCAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTRSQTM*EGMQPA
Trigger: GGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCT...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTTCTGGAAGCCCTTCCTaGGGGAGCAGCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPSGSPS*GSSTAS
Trigger: GCTGGCTGTGCTGCTCCCCAAGGAAGGGCTTCCAGA...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAGCAGAGATTCCCCTaGGAGCTATACTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIKQRFP*ELYCPC
Trigger: GCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCTT...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCTGACCATCCTCTCCTaGCAGTCCCACCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: QASTLVRASKPLFWWVRRLTILS*QSHLSL
Trigger: CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTTGCAGTCCCACCTCTCTCTTGTAAAAGCTCACAGTaGTGTTGGGGACTGAGCACA +
Preference number: 5 (lower is better)
Translates to: TGQVGRADHPLLAVPPLSCKSSQ*CWGLST
Trigger: TGTGCTCAGTCCCCAACACAACTGTGAGCTTTTACA...AGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCCCTACCCACCTGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGCCAGGGGGCTCCTCTTaGCTGAGTGTGGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEPGGSS*LSVGLL
Trigger: AAGAAGCCCCACACTCAGCAAAGAGGAGCCCCCTGG...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTCCAGGGGGCTCCTCTTaGCTGAGTGTGGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGPGGSS*LSVGLL
Trigger: AAGAAGCCCCACACTCAGCAAAGAGGAGCCCCCTGG...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTCCAGGTCAGCAACTaGGGGAGGGTCTCCCACAGA +
Preference number: 5 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVLQVSN*GRVSHR
Trigger: TCTGTGGGAGACCCTCCCCAAGTTGCTGACCTGGAG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCCAGACCCAGTGTCTTTaGGAGAGGGAGGTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIQTQCL*EREVCK
Trigger: CTTGCAGACCTCCCTCTCCAAAAGACACTGGGTCTG...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 90 bp TTAACCACCAGATCCTCCAGGGTCAGTGTCTGGTCCATGTCCCGCTaGATCTCCACTTCGCCCTTGTGGGTCATTTTGGAGGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: LTTRSSRVSVWSMSR*ISTSPLWVILEAGS
Trigger: ACTTCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGATTCAGCGGGACATGGACCAGACACTGACCCTGGAGGATCTGGTGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 90 bp GACAACTCCCTGGTTTTGGGCATCTCTGGAGCAGGCATAGGAGTTTaGCTTAGGGCTTTCTGGAAGATATTGTCCCCGCAGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: DNSLVLGISGAGIGV*LRAFWKILSPQLLA
Trigger: CGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 90 bp CCAGAGCTCTCTCTGGGAGGCCAGCAGACCTGCTACAAAGTTTCCTaGGGCAACTGTCATCTAAGATGTCACACAGAGAAACCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PELSLGGQQTCYKVS*GNCHLRCHTEKPGA
Trigger: GGCTCCAGGTTTCTCTGTGTGACATCTTAGATGACAGTTGCCCCAGGAAACTTTGTAGCAGGTCTGCTGGCCTCCCAGAGAGAGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CCA 90 bp CCCTATGCGTTAAGGATCGCTGTCCCCGTTTTATCACAAACAAGGTaGGCCTCAGAGCAGTCAGGTGACATGCCCAAGACCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: PYALRIAVPVLSQTR*ASEQSGDMPKTTLL
Trigger: CAGCAGTGTGGTCTTGGGCATGTCACCTGACTGCTCTGAGGCCCACCTTGTTTGTGATAAAACGGGGACAGCGATCCTTAACGCATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS-3UTR CAA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGTCTTGTACCGGCCATaGGTGCCTTGTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKVLYRP*VPCVRS
Trigger: GGACCTGACACAAGGCACCAATGGCCGGTACAAGAC...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGGTCTTGTACCGGCCATaGGTGCCTTGTGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LSLEQASTLVRASKPLFWVLYRP*VPCVRS
Trigger: GGACCTGACACAAGGCACCAATGGCCGGTACAAGAC...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCCCTTGTGGGTCATTTaGGAGGCTGGAAGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: QASTLVRASKPLFWWVRRPLWVI*EAGSLH
Trigger: GTGCAGACTTCCAGCCTCCAAAATGACCCACAAGGG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCATCTCCACTTCGCCCTaGTGGGTCATTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIISTSP*WVILEA
Trigger: AGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGAT...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGACAACTCCCTGGTTTaGGGCATCTCTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVDNSLV*GISGAG
Trigger: GCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGACAACTCCCTGGTTTaGGGCATCTCTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: TGFNTSEGIKTPVLVGKEDNSLV*GISGAG
Trigger: GCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTC...CTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCAAGCAGAGATTCCCCTaGGAGCTATACTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTKQRFP*ELYCPC
Trigger: GCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCTT...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGCTGACCATCCTCTCCTaGCAGTCCCACCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLLTILS*QSHLSL
Trigger: CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAG...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGACCATCCTCTCCTaGCAGTCCCACCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVLTILS*QSHLSL
Trigger: CAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAG...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp ATCCTCTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGAAGCTCACAGTTGTGTaGGGGACTGAGCACAGGGTC +
Preference number: 5 (lower is better)
Translates to: ILSLQSHLSLEQASTLVRKLTVV*GTEHRV
Trigger: GACCCTGTGCTCAGTCCCCAACACAACTGTGAGCTT...CCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGGAGGCAGACCCAGTGTCTTTaGGAGAGGGAGGTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: QASTLVRASKPLFWWVRRQTQCL*EREVCK
Trigger: CTTGCAGACCTCCCTCTCCAAAAGACACTGGGTCTG...CCTCCTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCGACACACACAGCTTCTaGCTGCTCTGCAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QQTLSNRKFKQGRWVGLTDTHSF*LLCRGL
Trigger: CAGGCCTCTGCAGAGCAGCAAGAAGCTGTGTGTGTC...GGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS TCA 90 bp TCAGCCAGCCTGGGTTCAAATCTCAGCTTCCCCACTGCACATATGTaGCCTTGGTGCCAGGTTCCTCATCCCAGAAATGGGCAGGGAATA +
Preference number: 5 (lower is better)
Translates to: SASLGSNLSFPTAHM*PWCQVPHPRNGQGI
Trigger: TATTCCCTGCCCATTTCTGGGATGAGGAACCTGGCACCAAGGTCACATATGTGCAGTGGGGAAGCTGAGATTTGAACCCAGGCTGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 90 bp GTCCCGCTGAATCTCCACTTCGCCCTTGTGGGTCATTTTGGAGGCTaGAAGTCTGCACGGCTCCTTCTGTTGCTGCTCAATGATATTCAG +
Preference number: 5 (lower is better)
Translates to: VPLNLHFALVGHFGG*KSARLLLLLLNDIQ
Trigger: CTGAATATCATTGAGCAGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGATTCAGCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
ENST00000531039.5
ENST00000533231.5
CDS-3UTR CAA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCCTCTTCAGCCTCCATaGGGCCACTCTGGGAACATG +
Preference number: 5 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPPLQPP*GHSGNM
Trigger: CATGTTCCCAGAGTGGCCCAATGGAGGCTGAAGAGG...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp ATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTCTCCTGCGATACTTGGTCTaGTACCGGCCATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: IVKQEVQTGQVGRADHPLLRYLV*YRPLVP
Trigger: AGGCACCAATGGCCGGTACAAGACCAAGTATCGCAG...GAGAGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGCTGCGATACTTGGTCTaGTACCGGCCATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKLRYLV*YRPLVP
Trigger: AGGCACCAATGGCCGGTACAAGACCAAGTATCGCAG...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCCCTTGTGGGTCATTTaGGAGGCTGGAAGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: LSLEQASTLVRASKPLFWPLWVI*EAGSLH
Trigger: GTGCAGACTTCCAGCCTCCAAAATGACCCACAAGGG...CCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGCTTTCTGGAAGATATaGTCCCCGCAGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVAFWKI*SPQLLA
Trigger: CGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCTTTCTGGAAGATATaGTCCCCGCAGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLAFWKI*SPQLLA
Trigger: CGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp TCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTGCTTTCTGGAAGATATaGTCCCCGCAGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SGTGFNTSEGIKTPVLVGAFWKI*SPQLLA
Trigger: CGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGC...ACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCGAAGGAGACCATCTTTaGAACCTTCCCCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTEGDHL*NLPQPG
Trigger: CCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTTC...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTAAGAAGCAGAGATTCCCCTaGGAGCTATACTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: GTGFNTSEGIKTPVLVGKKQRFP*ELYCPC
Trigger: GCAGGGGCAGTATAGCTCCAAGGGGAATCTCTGCTT...CTTACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTCCTTGCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAGGTTCTTAGTGCCCTaGGATCTTCTCTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: LLAVPPLSGTGFNTSEGIRFLVP*DLLCSM
Trigger: CATGGAGCAGAGAAGATCCAAGGGCACTAAGAACCT...GATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGTGGGTACTGTCCTGGTGGGAGTaGTCTGAGCTTCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LEQASTLVRASKPLFWWVLSWWE*SELLSV
Trigger: CACAGACAGAAGCTCAGACAACTCCCACCAGGACAG...TACCCACCAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACCATCCTAGCAGGCTGCGATACTaGGTCTTGTACCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: NIVKQEVQTGQVGRADHPSRLRY*VLYRPL
Trigger: CAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCT...AGGATGGTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp ACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGACAGCAGGCTGCGATACTaGGTCTTGTACCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: TANIVKQEVQTGQVGRADSRLRY*VLYRPL
Trigger: CAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCT...GTCAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGATCTCCACTTCGCCCTaGTGGGTCATTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLISTSP*WVILEA
Trigger: AGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGAT...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTGAAGGAGACCATCTTTaGAACCTTCCCCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: PPLSGTGFNTSEGIKTPVEGDHL*NLPQPG
Trigger: CCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTTC...AACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp GCAGTCCCACCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCAGGTTCTTAGTGCCCTaGGATCTTCTCTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: AVPPLSGTGFNTSEGIKTRFLVP*DLLCSM
Trigger: CATGGAGCAGAGAAGATCCAAGGGCACTAAGAACCT...GGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGGTGGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS-3UTR CAA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCCTCTTCAGCCTCCATaGGGCCACTCTGGGAACATG +
Preference number: 5 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGPLQPP*GHSGNM
Trigger: CATGTTCCCAGAGTGGCCCAATGGAGGCTGAAGAGG...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp CCTCTCTCTGGAACAGGCTTCAACACTAGTGAGGGCATCAAAACCCCTGTTCTGGCACGGCTCCTTCTGTaGCTGCTCAATGATATTCAG +
Preference number: 5 (lower is better)
Translates to: PLSGTGFNTSEGIKTPVLARLLL*LLNDIQ
Trigger: CTGAATATCATTGAGCAGCAACAGAAGGAGCCGTGC...CAGAACAGGGGTTTTGATGCCCTCACTAGTGTTGAAGCCTGTTCCAGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS-3UTR CAA 90 bp CAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTGGAAGGAGACCATCTTTaGAACCTTCCCCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: QQQTLSNRKFKQGRWVGLEGDHL*NLPQPG
Trigger: CCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTTC...CAGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS GCA 90 bp ATAATAGCAGAGGCATTTGTCACATCATATAGTCCCCGTAGACACTaGTGTGATGGGGTGAGACTGGAGTGGACGTCTCACCTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: IIAEAFVTSYSPRRH*CDGVRLEWTSHLCC
Trigger: GCAACAGAGGTGAGACGTCCACTCCAGTCTCACCCCATCACAGCAGTGTCTACGGGGACTATATGATGTGACAAATGCCTCTGCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 90 bp TCATATAGTCCCCGTAGACACTGCTGTGATGGGGTGAGACTGGAGTaGACGTCTCACCTCTGTTGCTATACATTTGGGTCATTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SYSPRRHCCDGVRLE*TSHLCCYTFGSFPG
Trigger: ACCTGGAAATGACCCAAATGTATAGCAACAGAGGTGAGACGTCCACTCCAGTCTCACCCCATCACAGCAGTGTCTACGGGGACTATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS-3UTR CAA 90 bp AATCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGGCTTTCTGGAAGATATaGTCCCCGCAGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: NQQQTLSNRKFKQGRWVGAFWKI*SPQLLA
Trigger: CGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGC...CCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257100.7
ENST00000360482.6
CDS-3UTR CAA 90 bp TCAACAGCAAACATTGTCAAACAGGAAGTTCAAACAGGGCAGGTGGGTAGGGCTTGTAAAAGCTCACAGTaGTGTTGGGGACTGAGCACA +
Preference number: 5 (lower is better)
Translates to: STANIVKQEVQTGQVGRACKSSQ*CWGLST
Trigger: TGTGCTCAGTCCCCAACACAACTGTGAGCTTTTACA...AGCCCTACCCACCTGCCCTGTTTGAACTTCCTGTTTGACAATGTTTGCTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360482.6
CDS TCA 90 bp TACATTGCCATTCAGTTTGTTCAGGGAATACAAACTGATTTAGACTaGGGAGCAGCCACACCCCTTAGGGATCCTCTTGGCACAGGTAGA +
Preference number: 5 (lower is better)
Translates to: YIAIQFVQGIQTDLD*GAATPLRDPLGTGR
Trigger: TCTACCTGTGCCAAGAGGATCCCTAAGGGGTGTGGCTGCTCCTCAGTCTAAATCAGTTTGTATTCCCTGAACAAACTGAATGGCAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 90 bp TGGGGTGAGACTGGAGTGGACGTCTCACCTCTGTTGCTATACATTTaGGTCATTTCCAGGTTTTCACTATTACTAAATAGCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: WGETGVDVSPLLLYI*VISRFSLLLNSTED
Trigger: GTCCTCAGTGCTATTTAGTAATAGTGAAAACCTGGAAATGACCCAAATGTATAGCAACAGAGGTGAGACGTCCACTCCAGTCTCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS GCA 72 bp CAGCTCCAAGACCCCTGGCCGGACCTCAGCAGCACCTaGAGCCCGGGAGCTGCCACCTCGAAGGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: QLQDPWPDLSST*SPGAATSKGLL
Trigger: AAGGAGGCCCTTCGAGGTGGCAGCTCCCGGGCTGCAGGTGCTGCTGAGGTCCGGCCAGGGGTCTTGGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CCA 72 bp CTTTTCTCCTCCTGGTCCCGCCAGCGGGCCAGCTCCTaGGGGGCCAGCTGCATCGAGCTCATCCGCACCAGG +
Preference number: 6 (lower is better)
Translates to: LFSSWSRQRASS*GASCIELIRTR
Trigger: CCTGGTGCGGATGAGCTCGATGCAGCTGGCCCCCCAGGAGCTGGCCCGCTGGCGGGACCAGGAGGAGAAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS CCA 72 bp CGAGCTGGGGTCGCCAAGGGCCAGGGAACCGCTTCTTaGAGGGTAGAAGGGGTCAGAGAGGCCACCAGGGTC +
Preference number: 6 (lower is better)
Translates to: RAGVAKGQGTAS*RVEGVREATRV
Trigger: GACCCTGGTGGCCTCTCTGACCCCTTCTACCCTCCAAGAAGCGGTTCCCTGGCCCTTGGCGACCCCAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000485944.5
ENST00000528791.5
ENST00000529396.1
ENST00000533231.5
CDS CCA 72 bp GAGCAGGCGGCAGTTCTGGGTGTCCCGGGCCCCATGTaGGCACAGTCTGACCACGCAGACGTCCTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: EQAAVLGVPGPM*AQSDHADVLGL
Trigger: AAGGCCAAGGACGTCTGCGTGGTCAGACTGTGCCCACATGGGGCCCGGGACACCCAGAACTGCCGCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS TCA 72 bp AGTTCTGGGTGTCCCGGGCCCCATGTGGGCACAGTCTaGCCACGCAGACGTCCTTGGCCTTGGCTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: SSGCPGPHVGTV*PRRRPWPWLGR
Trigger: TCTGCCCAGCCAAGGCCAAGGACGTCTGCGTGGTCAGACTGTGCCCACATGGGGCCCGGGACACCCAGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS TCA 72 bp GTGCTGCGCTCTGTGGAGGAGCCTGTGCAGCTGAACTaGGGGACTCCCCTCCACTGGGCACTGGGAACCCGA +
Preference number: 6 (lower is better)
Translates to: VLRSVEEPVQLN*GTPLHWALGTR
Trigger: TCGGGTTCCCAGTGCCCAGTGGAGGGGAGTCCCTCAGTTCAGCTGCACAGGCTCCTCCACAGAGCGCAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS GCA 72 bp TCGCTGCCAGTCCGCACGACACACACAGCTTCTTGCTaGTCTGCAGAGGCCTGTGCTGACGCCCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: SLPVRTTHTASC*SAEACADAPRH
Trigger: GTGCCTGGGGGCGTCAGCACAGGCCTCTGCAGAGCAGCAAGAAGCTGTGTGTGTCGTGCGGACTGGCAGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CCA 72 bp CCATTGGGCCACTCTGGGAACATGCAGGGTCCGAGCTaGGGTCGCCAAGGGCCAGGGAACCGCTTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: PLGHSGNMQGPS*GRQGPGNRFLE
Trigger: CTCCAAGAAGCGGTTCCCTGGCCCTTGGCGACCCCAGCTCGGACCCTGCATGTTCCCAGAGTGGCCCAATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000485944.5
ENST00000528791.5
ENST00000529396.1
ENST00000533231.5
CDS CCA 72 bp CCAGGTCTGAGGACAAGTTCCAGGAGGCCCTCTGGATaGACTGCCAGGGTGCCGGGTGGTTCCCTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: PGLRTSSRRPSG*TARVPGGSLPG
Trigger: TCCAGGCAGGGAACCACCCGGCACCCTGGCAGTCCATCCAGAGGGCCTCCTGGAACTTGTCCTCAGACCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CAA 90 bp TTGGCCTTGGCTGGGCAGATGCTGGCCAGAAGGTCCCAGACAATGTaGGAGGGGATGCAGCCTGCCGAGCGGATCACGGTGGGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LALAGQMLARRSQTM*EGMQPAERITVGRA
Trigger: GGCTCTGCCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTGGCCAGCATCTGCCCAGCCAAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS TCA 72 bp GTCCCGAGACCAGCTGGGCCCTGGCCCGGAACCGCTTaGTGGAGAACATGTCCAGAACACCTTCCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VPRPAGPWPGTA*WRTCPEHLPRV
Trigger: CACCCTGGGAAGGTGTTCTGGACATGTTCTCCATCAAGCGGTTCCGGGCCAGGGCCCAGCTGGTCTCGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS TCA 72 bp AGAGGCCAGCCCGTGGCGCTGCCTATCATTGAGGTATaGGTAGAGCAGGCGGCAGTTCTGGGTGTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: RGQPVALPIIEV*VEQAAVLGVPG
Trigger: GCCCGGGACACCCAGAACTGCCGCCTGCTCTACTCATACCTCAATGATAGGCAGCGCCACGGGCTGGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS GCA 72 bp CCGGCCATTGGTGCCTTGTGTCAGGTCCCAGAGGGCTaGCTCAATGCCAGCAGCAATGCCCTCCACCACCTC +
Preference number: 6 (lower is better)
Translates to: PAIGALCQVPEG*LNASSNALHHL
Trigger: GAGGTGGTGGAGGGCATTGCTGCTGGCATTGAGGCAGCCCTCTGGGACCTGACACAAGGCACCAATGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS GCA 72 bp TGCTGGCCAGAAGGTCCCAGACAATGTTGGAGGGGATaGAGCCTGCCGAGCGGATCACGGTGGGCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: CWPEGPRQCWRG*SLPSGSRWAEP
Trigger: AGGCTCTGCCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTGGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 72 bp CTGGGCAGATGCTGGCCAGAAGGTCCCAGACAATGTTaGAGGGGATGCAGCCTGCCGAGCGGATCACGGTGG +
Preference number: 6 (lower is better)
Translates to: LGRCWPEGPRQC*RGCSLPSGSRW
Trigger: CCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTGGCCAGCATCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 72 bp CAGGAGGCCCTCTGGATGGACTGCCAGGGTGCCGGGTaGTTCCCTGCCTGGAGCATCCCTAAACCAATCCAC +
Preference number: 6 (lower is better)
Translates to: QEALWMDCQGAG*FPAWSIPKPIH
Trigger: GTGGATTGGTTTAGGGATGCTCCAGGCAGGGAACCACCCGGCACCCTGGCAGTCCATCCAGAGGGCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 72 bp GCAGATCCTGTGTCCCTACTGTGGGGACTGGAACACTaGCCCAAGCTTGGCCTTGTGCAGGGGGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: ADPVSLLWGLEH*PKLGLVQGAAR
Trigger: CCTGGCAGCCCCCTGCACAAGGCCAAGCTTGGGCCAGTGTTCCAGTCCCCACAGTAGGGACACAGGATCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS CAA 72 bp GCTGGGCAGATGCTGGCCAGAAGGTCCCAGACAATGTaGGAGGGGATGCAGCCTGCCGAGCGGATCACGGTG +
Preference number: 6 (lower is better)
Translates to: AGQMLARRSQTM*EGMQPAERITV
Trigger: CACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTGGCCAGCATCTGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CAA 90 bp AGAGGGAGGTCTGCAAGGGCCTCCCAAGGACTCCAGGTCAGCAACTaGGGGAGGGTCTCCCACAGACAGGAGGTTGTCCCCACGAGGGCT +
Preference number: 6 (lower is better)
Translates to: RGRSARASQGLQVSN*GRVSHRQEVVPTRA
Trigger: AGCCCTCGTGGGGACAACCTCCTGTCTGTGGGAGACCCTCCCCAAGTTGCTGACCTGGAGTCCTTGGGAGGCCCTTGCAGACCTCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CAA 90 bp GCCCAGCCCAAAGCCCTGCTCACCAGGTTCCTGGGGTCCCGCAGGTaGAACAGCAGGCTGCGATACTTGGTCTTGTACCGGCCATTGGTG +
Preference number: 6 (lower is better)
Translates to: AQPKALLTRFLGSRR*NSRLRYLVLYRPLV
Trigger: CACCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCAGGAACCTGGTGAGCAGGGCTTTGGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460061.5
CDS TCA 72 bp CTGATGCGATGGGCAGGGCCTGTGGGCTGCAGTCCATaGACATCTGCGGTCCCACCAGATCCTCCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: LMRWAGPVGCSP*TSAVPPDPPGS
Trigger: TGACCCTGGAGGATCTGGTGGGACCGCAGATGTTCATGGACTGCAGCCCACAGGCCCTGCCCATCGCATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000533231.5
CDS TCA 72 bp CTGGCCACGGCCAAAGCCATGACCAGCTGGTGCTACTaGATAGGGATGCTGGGACTGGCGCAAGCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LATAKAMTSWCY*IGMLGLAQAWL
Trigger: GAGCCAGGCTTGCGCCAGTCCCAGCATCCCTATTCAGTAGCACCAGCTGGTCATGGCTTTGGCCGTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS TCA 72 bp CTCTTGGTCTGGGGGCACAGTAAGGCTTGGAGCTGGTaGCTCATGGTCGCCAGGGATTCGAGGTGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: LLVWGHSKAWSW*LMVARDSRCRS
Trigger: GCTCCGGCACCTCGAATCCCTGGCGACCATGAGTCACCAGCTCCAAGCCTTACTGTGCCCCCAGACCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS TCA 72 bp GAAACCTGGAGCCTCTTGGAGGTCAGAGCTCTCCCCTaGGTAGGCACCGAGGGCAGCTGCATGTGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: ETWSLLEVRALP*VGTEGSCMWSP
Trigger: TGGGCTCCACATGCAGCTGCCCTCGGTGCCTACTCAGGGGAGAGCTCTGACCTCCAAGAGGCTCCAGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 72 bp CTGATGCGATGGGCAGGGCCTGTGGGCTGCAGTCCATaGACATCTGCGGTCCCAGATCCTCCAGGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: LMRWAGPVGCSP*TSAVPDPPGSV
Trigger: CACTGACCCTGGAGGATCTGGGACCGCAGATGTTCATGGACTGCAGCCCACAGGCCCTGCCCATCGCATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS TCA 72 bp CTGATGCGATGGGCAGGGCCTGTGGGCTGCAGTCCATaGACATCTGCGGTCCCCTTTTCTCCTCCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: LMRWAGPVGCSP*TSAVPFSPPGP
Trigger: GGGACCAGGAGGAGAAAAGGGGACCGCAGATGTTCATGGACTGCAGCCCACAGGCCCTGCCCATCGCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473361.5
ENST00000528579.1
ENST00000532604.5
CDS GCA 72 bp CAGAAGGTCCCAGACAATGTTGGAGGGGATGCAGCCTaGCGAGCGGATCACGGTGGGCAGAGCCTGGACAAG +
Preference number: 6 (lower is better)
Translates to: QKVPDNVGGDAA*RADHGGQSLDK
Trigger: CTTGTCCAGGCTCTGCCCACCGTGATCCGCTCGGCAGGCTGCATCCCCTCCAACATTGTCTGGGACCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 72 bp AGTTGGGGTCTAAGAAGTGGTGGTCATGCTGCCCCGTaGTGTCCTCTGATGCGATGGGCAGGGCCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: SWGLRSGGHAAP*CPLMRWAGPVG
Trigger: GCCCACAGGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000532604.5
ENST00000533231.5
CDS CCA 72 bp TCTGAAAGGCGCCCCACCCAGGTTCCCAAGCCTTACTaGGACAGTCCCCCAGCATCCAAGAAATCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: SERRPTQVPKPY*DSPPASKKSGP
Trigger: GGGCCCGGATTTCTTGGATGCTGGGGGACTGTCCCAGTAAGGCTTGGGAACCTGGGTGGGGCGCCTTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525930.1
ENST00000529396.1
CDS CAA 72 bp TCTGCAAGGGCCTCCCAAGGACTCCAGGTCAGCAACTaGGGGAGGGTCTCCCACAGACAGGAGGTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SARASQGLQVSN*GRVSHRQEVVP
Trigger: GGGGACAACCTCCTGTCTGTGGGAGACCCTCCCCAAGTTGCTGACCTGGAGTCCTTGGGAGGCCCTTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 72 bp GCTCCACAGAGGCCAGCCCGTGGCGCTGCCTATCATTaGGGTATGAGTAGAGCAGGCGGCAGTTCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: APQRPARGAAYH*GMSRAGGSSGC
Trigger: ACACCCAGAACTGCCGCCTGCTCTACTCATACCTCAATGATAGGCAGCGCCACGGGCTGGCCTCTGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000533231.5
CDS TCA 72 bp CCCTTCCTTGGGGAGCAGCACAGCCAGCAACAGACTTaGGTGAGTGACCTCCAGACCTTGGCCTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PFLGEQHSQQQT*VSDLQTLALAG
Trigger: CCCAGCCAAGGCCAAGGTCTGGAGGTCACTCACTCAAGTCTGTTGCTGGCTGTGCTGCTCCCCAAGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS GCA 72 bp ATGTGGCAGTTGGGGTCTAAGAAGTGGTGGTCATGCTaGCCCGTGGTGTCCTCTGATGCGATGGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: MWQLGSKKWWSC*PVVSSDAMGRA
Trigger: GGCCCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000532604.5
ENST00000533231.5
CDS CCA 72 bp GGAGCCCAGATGGAGGGACCCTGTCCTGTGGTTCCGTaGGAGACAACTCCCTGGTTTTGGGCATCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: GAQMEGPCPVVP*ETTPWFWASLE
Trigger: CTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCACGGAACCACAGGACAGGGTCCCTCCATCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000528579.1
ENST00000533231.5
CDS TCA 72 bp GGAGGGACAGAAGACAGGGCCAGACAGAGCAGGCCATaGGGACTTCCCCGGCACCTCCTTTCTTTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: GGTEDRARQSRP*GLPRHLLSFQS
Trigger: GCTCTGAAAAGAAAGGAGGTGCCGGGGAAGTCCTCATGGCCTGCTCTGTCTGGCCCTGTCTTCTGTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS GCA 72 bp TCTGGGAGCTCCCGAAGGCGAGTCCATAGTACCTCCTaGATGGAACGGACAACAGTGCCCCGCACCCCAATA +
Preference number: 6 (lower is better)
Translates to: SGSSRRRVHSTS*MERTTVPRTPI
Trigger: TATTGGGGTGCGGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTATGGACTCGCCTTCGGGAGCTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000531039.5
ENST00000533231.5
CDS GCA 72 bp GCAGGCTGCGATACTTGGTCTTGTACCGGCCATTGGTaGCTTGTGTCAGGTCCCAGAGGGCTGCCTCAATGC +
Preference number: 6 (lower is better)
Translates to: AGCDTWSCTGHW*LVSGPRGLPQC
Trigger: GCATTGAGGCAGCCCTCTGGGACCTGACACAAGGCACCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS GCA 72 bp CAGATGTGGCAGTTGGGGTCTAAGAAGTGGTGGTCATaGTGCCCCGTGGTGTCCTCTGATGCGATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: QMWQLGSKKWWS*CPVVSSDAMGR
Trigger: CCTGCCCATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000532604.5
ENST00000533231.5
CDS GCA 72 bp CAGGCCCAGACCCAGTGTCTTTTGGAGAGGGAGGTCTaGAAGGGCCTCCCAAGGACTCCAGGTCAGCAACTT +
Preference number: 6 (lower is better)
Translates to: QAQTQCLLEREV*KGLPRTPGQQL
Trigger: AAGTTGCTGACCTGGAGTCCTTGGGAGGCCCTTGCAGACCTCCCTCTCCAAAAGACACTGGGTCTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS GCA 72 bp AGCAGGGATTTCTGTCGTTCACTGTCACTTCCCCAGTaGCTAGAACCGTGCCTGGCACCTGGTAGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: SRDFCRSLSLPQ*LEPCLAPGRCP
Trigger: GGGGCACCTACCAGGTGCCAGGCACGGTTCTAGGCACTGGGGAAGTGACAGTGAACGACAGAAATCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS GCA 72 bp GGAACACTGGCCCAAGCTTGGCCTTGTGCAGGGGGCTaGCAGGAGGCTGGGATGATTAGTTCCATTGCACAG +
Preference number: 6 (lower is better)
Translates to: GTLAQAWPCAGG*QEAGMISSIAQ
Trigger: CTGTGCAATGGAACTAATCATCCCAGCCTCCTGGCAGCCCCCTGCACAAGGCCAAGCTTGGGCCAGTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS CCA 72 bp CCACCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTaGTGGTCATGCTGCCCCGTGGTGTCCTCTGATGCG +
Preference number: 6 (lower is better)
Translates to: PPLQMWQLGSKK*WSCCPVVSSDA
Trigger: CGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532604.5
CDS CAA 72 bp GCTGCGATACTTGGTCTTGTACCGGCCATTGGTGCCTaGTGTCAGGTCCCAGAGGGCTGCCTCAATGCCAGC +
Preference number: 6 (lower is better)
Translates to: AAILGLVPAIGA*CQVPEGCLNAS
Trigger: GCTGGCATTGAGGCAGCCCTCTGGGACCTGACACAAGGCACCAATGGCCGGTACAAGACCAAGTATCGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS CAA 72 bp AAAGCCCTGCTCACCAGGTTCCTGGGGTCCCGCAGGTaGAACAGCAGGCTGCGATACTTGGTCTTGTACCGG +
Preference number: 6 (lower is better)
Translates to: KALLTRFLGSRR*NSRLRYLVLYR
Trigger: CCGGTACAAGACCAAGTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCAGGAACCTGGTGAGCAGGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460061.5
CDS CAA 90 bp GGAGTTTGGCTTAGGGCTTTCTGGAAGATATTGTCCCCGCAGCTCTaGGCGGCTTCGAAGGAGCCTAGCAGCTCATTCGAGGGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: GVWLRAFWKILSPQL*AASKEPSSSFEGSQ
Trigger: CTGGGAGCCCTCGAATGAGCTGCTAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CAA 90 bp GGAGGGACCCTGTCCTGTGGTTCCGTGGGAGACAACTCCCTGGTTTaGGGCATCTCTGGAGCAGGCATAGGAGTTTGGCTTAGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: GGTLSCGSVGDNSLV*GISGAGIGVWLRAF
Trigger: GAAAGCCCTAAGCCAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCACGGAACCACAGGACAGGGTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000528579.1
ENST00000533231.5
CDS CAA 90 bp GAAGACTTGCCCAAGGCCACACAGGAAAAGCCAGTGCTATGTCTGTaGCACCAGGTGGTGGCCTCCCCCTCAACCCTGCTGGGTTATCCA +
Preference number: 6 (lower is better)
Translates to: EDLPKATQEKPVLCL*HQVVASPSTLLGYP
Trigger: TGGATAACCCAGCAGGGTTGAGGGGGAGGCCACCACCTGGTGCAACAGACATAGCACTGGCTTTTCCTGTGTGGCCTTGGGCAAGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS TCA 72 bp ATAACCCTTCTCGTCTCTCTCCCATCGGTCCCGTTCTaGAAGGCGCCCCACCCAGGTTCCCAAGCCTTACTG +
Preference number: 6 (lower is better)
Translates to: ITLLVSLPSVPF*KAPHPGSQALL
Trigger: CAGTAAGGCTTGGGAACCTGGGTGGGGCGCCTTTCAGAACGGGACCGATGGGAGAGAGACGAGAAGGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525930.1
ENST00000529396.1
CDS CCA 72 bp GGAGCTCCCGAAGGCGAGTCCATAGTACCTCCTGCATaGAACGGACAACAGTGCCCCGCACCCCAATATACA +
Preference number: 6 (lower is better)
Translates to: GAPEGESIVPPA*NGQQCPAPQYT
Trigger: TGTATATTGGGGTGCGGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTATGGACTCGCCTTCGGGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000531039.5
ENST00000533231.5
CDS CCA 72 bp ACAGCAGGCTGCGATACTTGGTCTTGTACCGGCCATTaGTGCCTTGTGTCAGGTCCCAGAGGGCTGCCTCAA +
Preference number: 6 (lower is better)
Translates to: TAGCDTWSCTGH*CLVSGPRGLPQ
Trigger: TTGAGGCAGCCCTCTGGGACCTGACACAAGGCACCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS CCA 72 bp CAGTCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTaGTGGTCATGCTGCCCCGTGGTGTCCTCTGATGCG +
Preference number: 6 (lower is better)
Translates to: QSLQMWQLGSKK*WSCCPVVSSDA
Trigger: CGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 72 bp AGCTTGCTCCCGGCCCATCTGGTGACAGGCCTGGCATaGAGCTGGCTCCTTCCATGTTCTGTAAAAGCTCAC +
Preference number: 6 (lower is better)
Translates to: SLLPAHLVTGLA*SWLLPCSVKAH
Trigger: GTGAGCTTTTACAGAACATGGAAGGAGCCAGCTCCATGCCAGGCCTGTCACCAGATGGGCCGGGAGCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CCA 72 bp CTCTTTGCTGAGTGTGGGGCTTCTTCTGTCACACCCTaGAGAACTCATTCCACCGTCTCTGGCCTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: LFAECGASSVTP*RTHSTVSGLPG
Trigger: CCCAGGGAGGCCAGAGACGGTGGAATGAGTTCTCCAGGGTGTGACAGAAGAAGCCCCACACTCAGCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CCA 72 bp TCAGCGCCAAGAGCCCTAGACTATTGTCACTCCCGTTaGCTTCCCAGGTCTGAGGACAAGTTCCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SAPRALDYCHSR*LPRSEDKFQEA
Trigger: GGCCTCCTGGAACTTGTCCTCAGACCTGGGAAGCCAACGGGAGTGACAATAGTCTAGGGCTCTTGGCGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 72 bp CACAGGAAAAGCCAGTGCTATGTCTGTTGCACCAGGTaGTGGCCTCCCCCTCAACCCTGCTGGGTTATCCAC +
Preference number: 6 (lower is better)
Translates to: HRKSQCYVCCTR*WPPPQPCWVIH
Trigger: GTGGATAACCCAGCAGGGTTGAGGGGGAGGCCACCACCTGGTGCAACAGACATAGCACTGGCTTTTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS CCA 72 bp TTTTCAGAGCAGATCCTGTGTCCCTACTGTGGGGACTaGAACACTGGCCCAAGCTTGGCCTTGTGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: FSEQILCPYCGD*NTGPSLALCRG
Trigger: CCCCCTGCACAAGGCCAAGCTTGGGCCAGTGTTCCAGTCCCCACAGTAGGGACACAGGATCTGCTCTGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS CCA 72 bp CCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTGGTaGTCATGCTGCCCCGTGGTGTCCTCTGATGCGATG +
Preference number: 6 (lower is better)
Translates to: PLQMWQLGSKKW*SCCPVVSSDAM
Trigger: CATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532604.5
CDS CAA 72 bp AACAGCAGGCTGCGATACTTGGTCTTGTACCGGCCATaGGTGCCTTGTGTCAGGTCCCAGAGGGCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: NSRLRYLVLYRP*VPCVRSQRAAS
Trigger: TGAGGCAGCCCTCTGGGACCTGACACAAGGCACCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS CAA 72 bp TCCCGCAGGTTGAACAGCAGGCTGCGATACTTGGTCTaGTACCGGCCATTGGTGCCTTGTGTCAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SRRLNSRLRYLV*YRPLVPCVRSQ
Trigger: CTGGGACCTGACACAAGGCACCAATGGCCGGTACAAGACCAAGTATCGCAGCCTGCTGTTCAACCTGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS CAA 90 bp TCTTGGGCACAGGGCACTGGACCTTTCTTCAGGTTCTTAGTGCCCTaGGATCTTCTCTGCTCCATGAATGGGCCTGAGCAGGCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SWAQGTGPFFRFLVP*DLLCSMNGPEQALL
Trigger: CAGCAGGGCCTGCTCAGGCCCATTCATGGAGCAGAGAAGATCCAAGGGCACTAAGAACCTGAAGAAAGGTCCAGTGCCCTGTGCCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360482.6
ENST00000485944.5
ENST00000533231.5
CDS CAA 90 bp ACCCCACACCTGTCCTGTGGTTCCGTGGGAGACAACTCCCTGGTTTaGGGCATCTCTGGAGCAGGCATAGGAGTTTGGCTTAGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: TPHLSCGSVGDNSLV*GISGAGIGVWLRAF
Trigger: GAAAGCCCTAAGCCAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCACGGAACCACAGGACAGGTGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS TCA 72 bp CTGGAAGTCTGCACGGCTCCTTCTGTTGCTGCTCAATaGTATTCAGGCCCCTTTTCTCCTCCTGGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LEVCTAPSVAAQ*YSGPFSPPGPA
Trigger: GGCGGGACCAGGAGGAGAAAAGGGGCCTGAATATCATTGAGCAGCAACAGAAGGAGCCGTGCAGACTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
ENST00000531039.5
ENST00000533231.5
CDS TCA 72 bp CCTAGACTATTGTCACTCCCGTTGGCTTCCCAGGTCTaGGGACAAGTTCCAGGAGGCCCTCTGGATGGACTG +
Preference number: 6 (lower is better)
Translates to: PRLLSLPLASQV*GQVPGGPLDGL
Trigger: CAGTCCATCCAGAGGGCCTCCTGGAACTTGTCCTCAGACCTGGGAAGCCAACGGGAGTGACAATAGTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS GCA 72 bp CCATCTGAAAAAGTCACTGCCTGGAACAGCGCAGCCTaGTGCTTCCCAGCAGAGATCTGGGCAGAATGCCAG +
Preference number: 6 (lower is better)
Translates to: PSEKVTAWNSAA*CFPAEIWAECQ
Trigger: CTGGCATTCTGCCCAGATCTCTGCTGGGAAGCAGCAGGCTGCGCTGTTCCAGGCAGTGACTTTTTCAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 72 bp CCCGCTGAATCTCCACTTCGCCCTTGTGGGTCATTTTaGAGGCTGGAAGTCTGCACGGCTCCTTCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: PAESPLRPCGSF*RLEVCTAPSVA
Trigger: AGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGATTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
ENST00000531039.5
ENST00000533231.5
CDS CCA 72 bp TCCTTGCAGATGTGGCAGTTGGGGTCTAAGAAGTGGTaGTCATGCTGCCCCGTGGTGTCCTCTGATGCGATG +
Preference number: 6 (lower is better)
Translates to: SLQMWQLGSKKW*SCCPVVSSDAM
Trigger: CATCGCATCAGAGGACACCACGGGGCAGCATGACCACCACTTCTTAGACCCCAACTGCCACATCTGCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 72 bp CTCCCGGCCCATCTGGTGACAGGCCTGGCATGGAGCTaGCTCCTTCCATGTTCTGTAAAAGCTCACAGTTGT +
Preference number: 6 (lower is better)
Translates to: LPAHLVTGLAWS*LLPCSVKAHSC
Trigger: ACAACTGTGAGCTTTTACAGAACATGGAAGGAGCCAGCTCCATGCCAGGCCTGTCACCAGATGGGCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CAA 90 bp TCTGGAGCAGGCATAGGAGTTTGGCTTAGGGCTTTCTGGAAGATATaGTCCCCGCAGCTCTTGGCGGCTTCGAAGGAGCCTAGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SGAGIGVWLRAFWKI*SPQLLAASKEPSSS
Trigger: TGAGCTGCTAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS TCA 72 bp CTCTCCCAGTTCTCACACTGCGCAAGGAGCAGATACTaGACGGGGTTCGTGCCCATAACCCTTCTCGTCTCT +
Preference number: 6 (lower is better)
Translates to: LSQFSHCARSRY*TGFVPITLLVS
Trigger: AGAGACGAGAAGGGTTATGGGCACGAACCCCGTTCAGTATCTGCTCCTTGCGCAGTGTGAGAACTGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525930.1
ENST00000529396.1
CDS GCA 72 bp GAGTCCATAGTACCTCCTGCATGGAACGGACAACAGTaGCCCGCACCCCAATATACAGGGATGGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: ESIVPPAWNGQQ*PAPQYTGMASP
Trigger: AGGAGAAGCCATCCCTGTATATTGGGGTGCGGGGCACTGTTGTCCGTTCCATGCAGGAGGTACTATGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000529396.1
ENST00000531039.5
ENST00000533231.5
CDS GCA 72 bp GATGGGGAAAGTGAGGTTCCCAAGGGAGGGAAGACTTaGCCAAGGCCACACAGGAAAAGCCAGTGCTATGTC +
Preference number: 6 (lower is better)
Translates to: DGESEVPKGGKT*PRPHRKSQCYV
Trigger: GACATAGCACTGGCTTTTCCTGTGTGGCCTTGGGCAAGTCTTCCCTCCCTTGGGAACCTCACTTTCCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473361.5
CDS CCA 72 bp TTAGGGCTTTCTGGAAGATATTGTCCCCGCAGCTCTTaGCGGCTTCGAAGGAGCCTAGCAGCTCATTCGAGG +
Preference number: 6 (lower is better)
Translates to: LGLSGRYCPRSS*RLRRSLAAHSR
Trigger: CCTCGAATGAGCTGCTAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 72 bp TCTGGAGCAGGCATAGGAGTTTGGCTTAGGGCTTTCTaGAAGATATTGTCCCCGCAGCTCTTGGCGGCTTCG +
Preference number: 6 (lower is better)
Translates to: SGAGIGVWLRAF*KILSPQLLAAS
Trigger: CGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 72 bp TCCCCTCCCCTCCCACCTCCTCTCTCTCTTCCTCTCTaGGGCTATCTAGGTCTTTCTCCTACATTGCCATTC +
Preference number: 6 (lower is better)
Translates to: SPPLPPPLSLPL*GYLGLSPTLPF
Trigger: GAATGGCAATGTAGGAGAAAGACCTAGATAGCCCCAGAGAGGAAGAGAGAGAGGAGGTGGGAGGGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CAA 72 bp TTGAGAAACAAGTCCAGGTTCCTGGGGTCCCGCAGGTaGAACAGCAGGCTGCGATACTTGGTCTTGTACCGG +
Preference number: 6 (lower is better)
Translates to: LRNKSRFLGSRR*NSRLRYLVLYR
Trigger: CCGGTACAAGACCAAGTATCGCAGCCTGCTGTTCAACCTGCGGGACCCCAGGAACCTGGACTTGTTTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000468720.5
ENST00000473361.5
ENST00000485944.5
ENST00000528579.1
ENST00000531039.5
ENST00000532604.5
ENST00000533231.5
CDS CAA 72 bp CTTAGGGCTTTCTGGAAGATATTGTCCCCGCAGCTCTaGGCGGCTTCGAAGGAGCCTAGCAGCTCATTCGAG +
Preference number: 6 (lower is better)
Translates to: LRAFWKILSPQL*AASKEPSSSFE
Trigger: CTCGAATGAGCTGCTAGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CAA 72 bp GGCATAGGAGTTTGGCTTAGGGCTTTCTGGAAGATATaGTCCCCGCAGCTCTTGGCGGCTTCGAAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: GIGVWLRAFWKI*SPQLLAASKEP
Trigger: AGGCTCCTTCGAAGCCGCCAAGAGCTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTCCTATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CAA 72 bp CTGTCCTGTGGTTCCGTGGGAGACAACTCCCTGGTTTaGGGCATCTCTGGAGCAGGCATAGGAGTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: LSCGSVGDNSLV*GISGAGIGVWL
Trigger: AAGCCAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACCAGGGAGTTGTCTCCCACGGAACCACAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS GCA 72 bp TTGGAGGCTGGAAGTCTGCACGGCTCCTTCTGTTGCTaGTCAATGATATTCAGGCCCCTTTTCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LEAGSLHGSFCC*SMIFRPLFSSW
Trigger: CCAGGAGGAGAAAAGGGGCCTGAATATCATTGAGCAGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
ENST00000531039.5
ENST00000533231.5
CDS CCA 72 bp CCCCGTAGACACTGCTGTGATGGGGTGAGACTGGAGTaGACGTCTCACCTCTGTTGCTATACATTTGGGTCA +
Preference number: 6 (lower is better)
Translates to: PRRHCCDGVRLE*TSHLCCYTFGS
Trigger: TGACCCAAATGTATAGCAACAGAGGTGAGACGTCCACTCCAGTCTCACCCCATCACAGCAGTGTCTACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CAA 72 bp GAGCTGGCTCCTTCCATGTTCTGTAAAAGCTCACAGTaGTGTTGGGGACTGAGCACAGGGTCTCCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: ELAPSMFCKSSQ*CWGLSTGSPVL
Trigger: CAGCACAGGAGACCCTGTGCTCAGTCCCCAACACAACTGTGAGCTTTTACAGAACATGGAAGGAGCCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS CAA 72 bp CAGGGCACTGGACCTTTCTTCAGGTTCTTAGTGCCCTaGGATCTTCTCTGCTCCATGAATGGGCCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: QGTGPFFRFLVP*DLLCSMNGPEQ
Trigger: CTGCTCAGGCCCATTCATGGAGCAGAGAAGATCCAAGGGCACTAAGAACCTGAAGAAAGGTCCAGTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360482.6
ENST00000485944.5
ENST00000533231.5
CDS TCA 72 bp ACCCCTCTCCTGAACAGGCAGCTGATGAGACCCAGGTaGACATCTGACCCACAGAACATTCAACTACAGCCA +
Preference number: 6 (lower is better)
Translates to: TPLLNRQLMRPR*TSDPQNIQLQP
Trigger: TGGCTGTAGTTGAATGTTCTGTGGGTCAGATGTTCACCTGGGTCTCATCAGCTGCCTGTTCAGGAGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS GCA 72 bp GAGGCATTTGTCACATCATATAGTCCCCGTAGACACTaGTGTGATGGGGTGAGACTGGAGTGGACGTCTCAC +
Preference number: 6 (lower is better)
Translates to: EAFVTSYSPRRH*CDGVRLEWTSH
Trigger: GTGAGACGTCCACTCCAGTCTCACCCCATCACAGCAGTGTCTACGGGGACTATATGATGTGACAAATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 72 bp AATCTCCACTTCGCCCTTGTGGGTCATTTTGGAGGCTaGAAGTCTGCACGGCTCCTTCTGTTGCTGCTCAAT +
Preference number: 6 (lower is better)
Translates to: NLHFALVGHFGG*KSARLLLLLLN
Trigger: ATTGAGCAGCAACAGAAGGAGCCGTGCAGACTTCCAGCCTCCAAAATGACCCACAAGGGCGAAGTGGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
ENST00000531039.5
ENST00000533231.5
CDS CCA 72 bp CTGGTTTTGGGCATCTCTGGAGCAGGCATAGGAGTTTaGCTTAGGGCTTTCTGGAAGATATTGTCCCCGCAG +
Preference number: 6 (lower is better)
Translates to: LVLGISGAGIGV*LRAFWKILSPQ
Trigger: CTGCGGGGACAATATCTTCCAGAAAGCCCTAAGCCAAACTCCTATGCCTGCTCCAGAGATGCCCAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000528579.1
ENST00000533231.5
CDS CCA 72 bp GGTGCCCTTCAGGGGCACATTCGGCCTCCTGTCATCTaGCTGATAGTATCTCTTCTCCACCTTACTGTTGAA +
Preference number: 6 (lower is better)
Translates to: GALQGHIRPPVI*LIVSLLHLTVE
Trigger: TTCAACAGTAAGGTGGAGAAGAGATACTATCAGCCAGATGACAGGAGGCCGAATGTGCCCCTGAAGGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CCA 72 bp TTAAGGATCGCTGTCCCCGTTTTATCACAAACAAGGTaGGCCTCAGAGCAGTCAGGTGACATGCCCAAGACC +
Preference number: 6 (lower is better)
Translates to: LRIAVPVLSQTR*ASEQSGDMPKT
Trigger: GGTCTTGGGCATGTCACCTGACTGCTCTGAGGCCCACCTTGTTTGTGATAAAACGGGGACAGCGATCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CAA 72 bp TCTCTTCTCCACCTTACTGTTGAAGGAGACCATCTTTaGAACCTTCCCCAACCAGGGGCTGGACCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SLLHLTVEGDHL*NLPQPGAGPCC
Trigger: ACAGCAGGGTCCAGCCCCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTTCAACAGTAAGGTGGAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS CAA 72 bp TTCAAATCTCAGCTTCCCCACTGCACATATGTGACCTaGGTGCCAGGTTCCTCATCCCAGAAATGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: FKSQLPHCTYVT*VPGSSSQKWAG
Trigger: CCCTGCCCATTTCTGGGATGAGGAACCTGGCACCAAGGTCACATATGTGCAGTGGGGAAGCTGAGATTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 72 bp GTAGAGACGGGGTTTTACTATGTTGGTTGGCCAGGATaGTCTCCATCTCTTGACCTCATGATCCACACGCCT +
Preference number: 6 (lower is better)
Translates to: VETGFYYVGWPG*SPSLDLMIHTP
Trigger: AGGCGTGTGGATCATGAGGTCAAGAGATGGAGACCATCCTGGCCAACCAACATAGTAAAACCCCGTCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CCA 72 bp TCTCTGGGAGGCCAGCAGACCTGCTACAAAGTTTCCTaGGGCAACTGTCATCTAAGATGTCACACAGAGAAA +
Preference number: 6 (lower is better)
Translates to: SLGGQQTCYKVS*GNCHLRCHTEK
Trigger: TTTCTCTGTGTGACATCTTAGATGACAGTTGCCCCAGGAAACTTTGTAGCAGGTCTGCTGGCCTCCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360482.6
ENST00000533231.5
CDS TCA 72 bp CATCTGGCTGATAGTATCTCTTCTCCACCTTACTGTTaGAGGAGACCATCTTTTGAACCTTCCCCAACCAGG +
Preference number: 6 (lower is better)
Translates to: HLADSISSPPYC*RRPSFEPSPTR
Trigger: CCTGGTTGGGGAAGGTTCAAAAGATGGTCTCCTTCAACAGTAAGGTGGAGAAGAGATACTATCAGCCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257100.7
ENST00000360482.6
ENST00000452755.6
ENST00000473361.5
ENST00000533231.5
CDS TCA 72 bp CCCTGCAGGAACCTACTTATTCTCACCCCAACTCCGTaGGGAGGAAATAGGATCATTCTCCTTTTATGGATG +
Preference number: 6 (lower is better)
Translates to: PCRNLLILTPTP*GGNRIILLLWM
Trigger: CATCCATAAAAGGAGAATGATCCTATTTCCTCCTCACGGAGTTGGGGTGAGAATAAGTAGGTTCCTGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452755.6
CDS TCA 72 bp ATTCAGTTTGTTCAGGGAATACAAACTGATTTAGACTaGGGAGCAGCCACACCCCTTAGGGATCCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: IQFVQGIQTDLD*GAATPLRDPLG
Trigger: GCCAAGAGGATCCCTAAGGGGTGTGGCTGCTCCTCAGTCTAAATCAGTTTGTATTCCCTGAACAAACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS GCA 72 bp GATGGGGTGAGACTGGAGTGGACGTCTCACCTCTGTTaGTATACATTTGGGTCATTTCCAGGTTTTCACTAT +
Preference number: 6 (lower is better)
Translates to: DGVRLEWTSHLC*YTFGSFPGFHY
Trigger: ATAGTGAAAACCTGGAAATGACCCAAATGTATAGCAACAGAGGTGAGACGTCCACTCCAGTCTCACCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5
CDS CAA 72 bp CAGCTGGGATCATATATTCAACTTGGTGTTCTCTTTTaGTTCACTAATAATAGCAGAGGCATTTGTCACATC +
Preference number: 6 (lower is better)
Translates to: QLGSYIQLGVLF*FTNNSRGICHI
Trigger: GATGTGACAAATGCCTCTGCTATTATTAGTGAACAAAAAGAGAACACCAAGTTGAATATATGATCCCAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460061.5
ENST00000468720.5
ENST00000485944.5