RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPNS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000183018

Ensembl transcript IDs: ENST00000329078.8, ENST00000570641.1, ENST00000570979.1, ENST00000571386.1, ENST00000571668.5, ENST00000573106.1, ENST00000573990.1, ENST00000576635.6

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTaGATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCC +
Preference number: 1 (lower is better)
Translates to: RPISPRSEAQLSSGP*IPGPRVSLKAGTAA
Trigger: GGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp GGCCAGAGAGGGTGGGTGCCTAGCCGTGGATCACACAGAAAGCTTTaGGGCAGCCCAGCCGGTCCCGGACGCTGTAGGACACCTCCCAGA +
Preference number: 1 (lower is better)
Translates to: GQRGWVPSRGSHRKL*GSPAGPGRCRTPPR
Trigger: TCTGGGAGGTGTCCTACAGCGTCCGGGACCGGCTGGGCTGCCCCAAAGCTTTCTGTGTGATCCACGGCTAGGCACCCACCCTCTCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp AGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCCTaGGCCACCTGCTCTCCGTATGGTCCAGGGTCTGTTGAGTCTTCA +
Preference number: 1 (lower is better)
Translates to: RPSREPQSRDCRPEA*ATCSPYGPGSVESS
Trigger: TGAAGACTCAACAGACCCTGGACCATACGGAGAGCAGGTGGCCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 90 bp GAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCAGGGACTTaGCCAAGATCACATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGA +
Preference number: 1 (lower is better)
Translates to: ESPAPWPFVPGRAGT*PRSHKLVAGQALPG
Trigger: TCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCTTGGGCAAGTCCCTGCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp CAGGTTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTaGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGAC +
Preference number: 1 (lower is better)
Translates to: QVASNIPKVRGPAEQ*SLHTRPSREPQSRD
Trigger: GTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 90 bp CGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCCTGGGCCACCTaGTCTCCGTATGGTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: REPQSRDCRPEAWAT*SPYGPGSVESSKLQ
Trigger: CTGCAGCTTTGAAGACTCAACAGACCCTGGACCATACGGAGAGCAGGTGGCCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp CCTTCGTTCCAGGGAGGGCAGGGACTTGCCCAAGATCACATAAGCTaGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGTCT +
Preference number: 1 (lower is better)
Translates to: PSFQGGQGLAQDHIS*WQARLSPDTHLGLS
Trigger: AGACAGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCTTGGGCAAGTCCCTGCCCTCCCTGGAACGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp GGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTaGCTCCAACACACACATCCTTCCAGGGTAACTGAGGACACAGCC +
Preference number: 1 (lower is better)
Translates to: GPCGPNLGLGTCPTV*LQHTHPSRVTEDTA
Trigger: GGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp GCAGGAAGCTTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTaGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCTGC +
Preference number: 1 (lower is better)
Translates to: AGSFVDSCFLQQPEP*LLPHGFWEWSPGPC
Trigger: GCAGGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 90 bp GTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTaGCAGGTTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: VSSREYPETWAPSFI*QVASNIPKVRGPAE
Trigger: CTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp TTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTGTaGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: LSLQSCRSCFAQQVV*ESPAPWPFVPGRAG
Trigger: CCCTGCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR TCA 90 bp CTGTCCAACCGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTaGGGACACAGCCTCTTCTTGATGCCAGGGCCACTCAGCAGGCCT +
Preference number: 1 (lower is better)
Translates to: LSNRVAPTHTSFQGN*GHSLFLMPGPLSRP
Trigger: AGGCCTGCTGAGTGGCCCTGGCATCAAGAAGAGGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 90 bp CTCCGTATGGTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTaGTTTGCCCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: LRMVQGLLSLQSCRS*FAQQVVWESPAPWP
Trigger: GGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGACCATACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 90 bp ACCCGAGACAGTGAGACAGTGTCCTCCAGGGAGTACCCAGAGACTTaGGCGCCCAGCTTCATTTGCCAGGTTGCGTCCAATATCCCCAAG +
Preference number: 1 (lower is better)
Translates to: TRDSETVSSREYPET*APSFICQVASNIPK
Trigger: CTTGGGGATATTGGACGCAACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTGTCTCACTGTCTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 90 bp TATGGTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTaGCCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGT +
Preference number: 1 (lower is better)
Translates to: YGPGSVESSKLQIVL*PASCVGKSSPLALR
Trigger: ACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGACCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR GCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCGAGGCCTGGGCCACCTaGTCTCCGTATGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPEAWAT*SPYGPG
Trigger: CCCTGGACCATACGGAGAGCAGGTGGCCCAGGCCTC...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCTGCCGCCCTGAGGCCTaGGCCACCTGCTCTCCGTAT +
Preference number: 2 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPCRPEA*ATCSPY
Trigger: ATACGGAGAGCAGGTGGCCCAGGCCTCAGGGCGGCA...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR GCA 90 bp GAAGCCCTGCAGAGTTGGGCTGGTGTGCACCTGCCAGAGACCTTGAGCCTGGGGCAGGTGGTGTACAGCTaGAGCCAGGGCCTTCACCCC +
Preference number: 2 (lower is better)
Translates to: EALQSWAGVHLPETLSLGQVVYS*SQGLHP
Trigger: GGGGTGAAGGCCCTGGCTGCAGCTGTACACCACCTG...CCCCAGGCTCAAGGTCTCTGGCAGGTGCACACCAGCCCAACTCTGCAGGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp ATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGTCTTCTCTGGGCCAGAGAGGGTaGGTGCCTAGCCGTGGATCA +
Preference number: 2 (lower is better)
Translates to: ISWWQARLSPDTHLGLSSLGQRG*VPSRGS
Trigger: TGATCCACGGCTAGGCACCCACCCTCTCTGGCCCAG...AGAAGACAGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp CAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGGGCCCAGCTGAGCAGTaGTCCCTGCATACCAGGCCC +
Preference number: 2 (lower is better)
Translates to: QCPPGSTQRLGRPASFARGPAEQ*SLHTRP
Trigger: GGGCCTGGTATGCAGGGACCACTGCTCAGCTGGGCC...CCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp GCTCTGGGGCAGGAAGCTTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTCTGGGACCTCCAGGCTaGGAGCCAACCCGAGACAGT +
Preference number: 2 (lower is better)
Translates to: ALGQEALWIAASSSSRSPLGPPG*EPTRDS
Trigger: ACTGTCTCGGGTTGGCTCCCAGCCTGGAGGTCCCAG...AGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CAA 90 bp TGGTGTACAGCTGCAGCCAGGGCCTTCACCCCTGGTGATGCCAGCTaGTCAGAACAGTCCCCATCTGGGACCTCCAGGCTGGGAGCCAAC +
Preference number: 2 (lower is better)
Translates to: WCTAAARAFTPGDAS*SEQSPSGTSRLGAN
Trigger: GTTGGCTCCCAGCCTGGAGGTCCCAGATGGGGACTGTTCTGACAAGCTGGCATCACCAGGGGTGAAGGCCCTGGCTGCAGCTGTACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR TCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGACACAGCCTCTTCTTaGTGCCAGGGCCACTCAGCA +
Preference number: 2 (lower is better)
Translates to: PAAGALATAPWILGMVSWDTASS*CQGHSA
Trigger: TGCTGAGTGGCCCTGGCATCAAGAAGAGGCTGTGTC...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR GCA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTTGGCCCCAGGGGCCCTaGGGCCCAAACCTAGGGCTG +
Preference number: 2 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLWPQGP*GPNLGL
Trigger: CAGCCCTAGGTTTGGGCCGCAGGGCCCCTGGGGCCA...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CAA 90 bp CCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGTaGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: PGSTQRLGRPASFAR*RPISPRSEAQLSSG
Trigger: ACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR TCA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTTACCAGGCCCTCGCGTaGGCCTCAAAGCCGGGACTG +
Preference number: 2 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLYQALA*ASKPGL
Trigger: CAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTA...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR TCA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTAGTGCAGGGAGTGGGTaGCGCAGGGGGCTAAGCTCC +
Preference number: 2 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLSAGSG*RRGLSS
Trigger: GGAGCTTAGCCCCCTGCGTCACCCACTCCCTGCACT...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGACGAGGTGGGAGTGTaGGTTCTTCATTGTCCCAAT +
Preference number: 2 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTADEVGV*VLHCPN
Trigger: ATTGGGACAATGAAGAACCCACACTCCCACCTCGTC...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATAGATCACATAAGCTGGTaGCAGGCCAGGCTCTCCCCG +
Preference number: 2 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIDHISW*QARLSP
Trigger: CGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATC...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATAGCCCAGCAAGTTGTGTaGGAAAGTCCAGCCCCCTGG +
Preference number: 2 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIAQQVV*ESPAPW
Trigger: CCAGGGGGCTGGACTTTCCCACACAACTTGCTGGGC...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR GCA 90 bp AAGAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGCCTCAAAGCCGGGACTaGCGCCCTGAGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: KRRQHSDLVLVQQENIAGPQSRD*RPEAWA
Trigger: GGCCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGG...CCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp CTTGTCAGGCCCTCGGGGTACCCCAGAGCTTGGTGGGTGAGTATTCCACCTGCTTTGGCAGCTGCATCCTaGTGTGTGCATGGATGGGAG +
Preference number: 2 (lower is better)
Translates to: LVRPSGYPRAWWVSIPPALAAAS*CVHGWE
Trigger: CTCCCATCCATGCACACACCAGGATGCAGCTGCCAA...AGCAGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR GCA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCCTGAGCAGTGGTCCCTaGATACCAGGCCCTCGCGTG +
Preference number: 2 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGLSSGP*IPGPRV
Trigger: CACGCGAGGGCCTGGTATGCAGGGACCACTGCTCAG...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCCCCCCTGGGGTCACTTaGTGGAATGCCAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGPPGVT*WNASSQ
Trigger: CTGGCTGCTGGCATTCCACCAAGTGACCCCAGGGGG...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR GCA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCCTGCAGATCGTGCTTTaGCCAGCAAGTTGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGLQIVL*PASCVG
Trigger: TCCCACACAACTTGCTGGGCAAAGCACGATCTGCAG...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR GCA 90 bp AAGAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGCGGAGCCCTGGCTACTaGCCCATGGATTCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: KRRQHSDLVLVQQENIAGRSPGY*PMDSGN
Trigger: ATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCG...CCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR TCA 90 bp CCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTTCCTTCCAGGGTAACTaGGGACACAGCCTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: PGSVESSKLQIVLCPASCSFQGN*GHSLFL
Trigger: CAAGAAGAGGCTGTGTCCTCAGTTACCCTGGAAGGA...ACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CCA 90 bp GTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTACCTGTCCAACCGTGTaGCTCCAACACACACATCCT +
Preference number: 2 (lower is better)
Translates to: VQGLLSLQSCRSCFAQQVTCPTV*LQHTHP
Trigger: AGGATGTGTGTGTTGGAGCCACACGGTTGGACAGGT...AACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 72 bp TCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTaGATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGG +
Preference number: 3 (lower is better)
Translates to: SPRSEAQLSSGP*IPGPRVSLKAG
Trigger: CCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp CTTCCTCCAGCAGCCGGAGCCCTGGCTACTGCCCCATaGATTCTGGGAATGGTCTCCTGGGCCCTGCCCCTG +
Preference number: 3 (lower is better)
Translates to: LPPAAGALATAP*ILGMVSWALPL
Trigger: CAGGGGCAGGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp TCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGGACACAGCCTCTTCTaGATGCCAGGGCCACTCAGC +
Preference number: 3 (lower is better)
Translates to: SLHTRPSREPQSRDCRPEGHSLF*MPGPLS
Trigger: GCTGAGTGGCCCTGGCATCAAGAAGAGGCTGTGTCC...CTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 72 bp GCCCCCTGGCCCTTCGTTCCAGGGAGGGCAGGGACTTaGCCAAGATCACATAAGCTGGTGGCAGGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: APWPFVPGRAGT*PRSHKLVAGQA
Trigger: AGCCTGGCCTGCCACCAGCTTATGTGATCTTGGGCAAGTCCCTGCCCTCCCTGGAACGAAGGGCCAGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp GGGTGGGTGCCTAGCCGTGGATCACACAGAAAGCTTTaGGGCAGCCCAGCCGGTCCCGGACGCTGTAGGACA +
Preference number: 3 (lower is better)
Translates to: GWVPSRGSHRKL*GSPAGPGRCRT
Trigger: TGTCCTACAGCGTCCGGGACCGGCTGGGCTGCCCCAAAGCTTTCTGTGTGATCCACGGCTAGGCACCCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp GGAGGGCAGGGACTTGCCCAAGATCACATAAGCTGGTaGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGG +
Preference number: 3 (lower is better)
Translates to: GGQGLAQDHISW*QARLSPDTHLG
Trigger: CCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCTTGGGCAAGTCCCTGCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCTCCCCGGACACCCACTaGGGGCTGTCTTCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTASPDTH*GLSSSL
Trigger: CAAGGAAGAAGACAGCCCCAAGTGGGTGTCCGGGGA...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 72 bp CAAAGCCGGGACTGCCGCCCTGAGGCCTGGGCCACCTaGTCTCCGTATGGTCCAGGGTCTGTTGAGTCTTCA +
Preference number: 3 (lower is better)
Translates to: QSRDCRPEAWAT*SPYGPGSVESS
Trigger: TGAAGACTCAACAGACCCTGGACCATACGGAGAGCAGGTGGCCCAGGCCTCAGGGCGGCAGTCCCGGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 72 bp ATAGCTGCTTCCTCCAGCAGCCGGAGCCCTGGCTACTaGCCCATGGATTCTGGGAATGGTCTCCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: IAASSSSRSPGY*PMDSGNGLLGP
Trigger: AGGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp TCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTaGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: SNIPKVRGPAEQ*SLHTRPSREPQ
Trigger: TTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp GCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATACCGCTGCAGATCGTGCTTaGCCCAGCAAGTTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: ASNIPKVRGPAEQWSLHTAADRA*PSKLCG
Trigger: CCCACACAACTTGCTGGGCAAAGCACGATCTGCAGC...GGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGCCTGGTGATGCCAGCTaGTCAGAACAGTCCCCATCT +
Preference number: 3 (lower is better)
Translates to: PAAGALATAPWILGMVSWPGDAS*SEQSPS
Trigger: AGATGGGGACTGTTCTGACAAGCTGGCATCACCAGG...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR TCA 72 bp GTGGTGTACAGCTGCAGCCAGGGCCTTCACCCCTGGTaGTGCCAGCTTGTCAGAACAGTCCCCATCTGGGAC +
Preference number: 3 (lower is better)
Translates to: VVYSCSQGLHPW*CQLVRTVPIWD
Trigger: GTCCCAGATGGGGACTGTTCTGACAAGCTGGCATCACCAGGGGTGAAGGCCCTGGCTGCAGCTGTACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp CAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGGCTTTGCCCAGCAAGTaGTGTGGGAAAGTCCAGCCC +
Preference number: 3 (lower is better)
Translates to: QCPPGSTQRLGRPASFARALPSK*CGKVQP
Trigger: GGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGC...CCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp CCTCTTGTCAGGCCCTCGGGGTACCCCAGAGCTTGGTGGGTGAGTATTCCACCTGGAGTACCCAGAGACTaGGGCGCCCAGCTTCATTTG +
Preference number: 3 (lower is better)
Translates to: PLVRPSGYPRAWWVSIPPGVPRD*GAQLHL
Trigger: CAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCC...AGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 72 bp AGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTaGCAGGTTGCGTCCAATATCCCCAAGGTCCGAGGC +
Preference number: 3 (lower is better)
Translates to: REYPETWAPSFI*QVASNIPKVRG
Trigger: GCCTCGGACCTTGGGGATATTGGACGCAACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp CAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTGTaGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: QSCRSCFAQQVV*ESPAPWPFVPG
Trigger: CCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTGGGGTACCCCAGAGCTaGGTGGGTGAGTATTCCACC +
Preference number: 3 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLGVPQS*VGEYST
Trigger: GGTGGAATACTCACCCACCAAGCTCTGGGGTACCCC...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR TCA 72 bp CTGGGCCACCTGCTCTCCGTATGGTCCAGGGTCTGTTaGGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LGHLLSVWSRVC*VFKAADRALPS
Trigger: GCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGACCATACGGAGAGCAGGTGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp GGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTaGCTCCAACACACACATCCTTCCAGGGTAACTGAG +
Preference number: 3 (lower is better)
Translates to: GPNLGLGTCPTV*LQHTHPSRVTE
Trigger: CTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp TTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTaGCTACTGCCCCATGGATTCTGGGAATGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: FVDSCFLQQPEP*LLPHGFWEWSP
Trigger: AGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCGGGGCTGGTGTGAAGTaGGCAGCTGCATCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGGAGVK*AAASWC
Trigger: ACACCAGGATGCAGCTGCCAACTTCACACCAGCCCC...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR TCA 72 bp CGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTaGGGACACAGCCTCTTCTTGATGCCAGGGCCACTC +
Preference number: 3 (lower is better)
Translates to: RVAPTHTSFQGN*GHSLFLMPGPL
Trigger: GAGTGGCCCTGGCATCAAGAAGAGGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp AGTGAGACAGTGTCCTCCAGGGAGTACCCAGAGACTTaGGCGCCCAGCTTCATTTGCCAGGTTGCGTCCAAT +
Preference number: 3 (lower is better)
Translates to: SETVSSREYPET*APSFICQVASN
Trigger: ATTGGACGCAACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTGTCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR-3UTR CAA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATAATGGTCCAGGGTCTGTaGAGTCTTCAAAGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIMVQGL*SLQSCR
Trigger: TCTGCAGCTTTGAAGACTCAACAGACCCTGGACCAT...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 72 bp GGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTaGCCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTG +
Preference number: 3 (lower is better)
Translates to: GSVESSKLQIVL*PASCVGKSSPL
Trigger: CAGGGGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CCA 72 bp TGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTaGTTCTTGTACAACAAGAAAACATCGCTGGGGCCC +
Preference number: 3 (lower is better)
Translates to: WLPEGRGGNTRT*FLYNKKTSLGP
Trigger: GGGCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR GCA 72 bp GTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTaGTTTGCCCAGCAAGTTGTGTGGGAAAGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: VQGLLSLQSCRS*FAQQVVWESPA
Trigger: GGCTGGACTTTCCCACACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCCCGGGACTGCCGCCCTaGGGCCTGGGCCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPPGLPP*GLGHLL
Trigger: GAGCAGGTGGCCCAGGCCTCAGGGCGGCAGTCCCGG...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGCCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGATGAGGTCCGGGCCTTaGGCTGGTCCCCGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WGSPAGPGRCRTPPRRGGMRSGP*AGPRAG
Trigger: ACCAGCTCGGGGACCAGCTCAAGGCCCGGACCTCAT...CCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGGCTGGGCTGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCGCCACTGCACCATCCTaGTCGGGCCCCGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLATAPS*SGPVGS
Trigger: GGAGCCGACGGGGCCCGACCAGGATGGTGCAGTGGC...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp ATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCCTGGGAGTGCAGGGAGTGGGTaGCGCAGGGGGCTAAGCTCC +
Preference number: 4 (lower is better)
Translates to: IPGPRVSLKAGTAALRPGSAGSG*RRGLSS
Trigger: GGAGCTTAGCCCCCTGCGTCACCCACTCCCTGCACT...CCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCCCGCGGAGCCGCCACTaGACCATCCTGGTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PASCVGKSSPLALRSREGPRSRH*TILVGP
Trigger: GGGCCCGACCAGGATGGTGCAGTGGCGGCTCCGCGG...GCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCGGGCCCGCCTTACGCTaGCCGACAGCGTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLGPALR*PTASAP
Trigger: AGGTGCAGACGCTGTCGGGCAGCGTAAGGCGGGCCC...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCGGTTTGGGCTGCTaGGCGCCGGGGCCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PAAGALATAPWILGMVSWAGLGC*APGPFA
Trigger: TGCAAAGGGCCCCGGCGCTCAGCAGCCCAAACCGGC...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp TCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGCGGCGCCTCGGTCCTTaGCCCCAAAGTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLHTRPSREPQSRDCRPERRLGP*PQSAAG
Trigger: TCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCG...CTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCTGGCTCCTGCCCCCGTaGCCACGCCCAGAAATCCCG +
Preference number: 4 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTAWLLPP*PRPEIP
Trigger: CGGGATTTCTGGGCGTGGTCACGGGGGCAGGAGCCA...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGTGCCCAGGGCCCCCGTaGCGAAGGAGACAGCCGACG +
Preference number: 4 (lower is better)
Translates to: PAAGALATAPWILGMVSWCPGPP*RRRQPT
Trigger: CGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCA...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCACCTGCCAGAGACCTTaGGCCTGGGGGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTATCQRP*AWGHRW
Trigger: CCACCTGTGCCCCCAGGCTCAAGGTCTCTGGCAGGT...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGAGAGCGGGATCCACATaGCCAGGGCCCCCGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PAAGALATAPWILGMVSWRAGST*PGPPWR
Trigger: TCGCCACGGGGGCCCTGGGCATGTGGATCCCGCTCT...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp ATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCCTGGGTGGCGAGGAAGAACATaGCGCCCAGGACCACGACGA +
Preference number: 4 (lower is better)
Translates to: IPGPRVSLKAGTAALRPGWRGRT*RPGPRR
Trigger: TCGTCGTGGTCCTGGGCGGCATGTTCTTCCTCGCCA...CCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCAGCTGGTTCACCTGCTaGTCAGCCCTGGCGCGGTCG +
Preference number: 4 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPSWFTC*SALARS
Trigger: CGACCGCGCCAGGGCTGAGCAGCAGGTGAACCAGCT...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCCTGGGCCAGAGAGGGTaGGTGCCTAGCCGTGGATCA +
Preference number: 4 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLLGQRG*VPSRGS
Trigger: TGATCCACGGCTAGGCACCCACCCTCTCTGGCCCAG...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp GCTCTGGGGCAGGAAGCTTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTCCCTGGCGCGGTCGCTaGCGAAGAAGAGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ALGQEALWIAASSSSRSPPWRGR*RRRAQW
Trigger: CCACTGCGCTCTTCTTCGTCAGCGACCGCGCCAGGG...AGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCCCAGCGCGTGGCTCCTaGCCCCGTGACCACGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSPARGS*PRDHAQ
Trigger: CTGGGCGTGGTCACGGGGGCAGGAGCCACGCGCTGG...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp AGATCACATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGCCAGCTGGTTCACCTaGTGCTCAGCCCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RSHKLVAGQALPGHPLGAASWFT*CSALAR
Trigger: CCGCGCCAGGGCTGAGCAGCAGGTGAACCAGCTGGC...AGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGCCTCAAAGCCGGGACTaGCGCCCTGAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QCPPGSTQRLGRPASFARPQSRD*RPEAWA
Trigger: GGCCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGG...CCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTGGCCCAGCTGAGCAGTaGTCCCTGCATACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PVPDAVGHLPDEVGVWVLGPAEQ*SLHTRP
Trigger: GGGCCTGGTATGCAGGGACCACTGCTCAGCTGGGCC...AAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCCCTGCAGAGTTGGGCTaGTGTGCACCTGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLPAELG*CAPARD
Trigger: GTCTCTGGCAGGTGCACACCAGCCCAACTCTGCAGG...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCCAGAAGTGCAGGGAGTaGGTGACGCAGGGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLQKCRE*VTQGAK
Trigger: CTTAGCCCCCTGCGTCACCCACTCCCTGCACTTCTG...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp GTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGTTGCACGTTGCCCAAGCTaGGGATGGCGGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSSREYPETWAPSFICQVARCPS*GWRRLP
Trigger: GGGCAGCCGCCGCCATCCTCAGCTTGGGCAACGTGC...AACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGCCGAGCTGGTCGGCATaGCCCCTTTTAGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAAGALATAPWILGMVSWPSWSA*PLLVAG
Trigger: CCCAGCCACTAAAAGGGGTCATGCCGACCAGCTCGG...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp ATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGTCTTCTCCAGCAGGTGGGAGGTaGAGCTCTGCAAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: ISWWQARLSPDTHLGLSSPAGGR*SSARPR
Trigger: CCGTGGCCTTGCAGAGCTTCACCTCCCACCTGCTGG...AGAAGACAGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCGAAAGGGCAGAGCATaGGCGCGTAGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PVPDAVGHLPDEVGVWVLRKGRA*ARSPGS
Trigger: TGAGCCTGGGCTACGCGCTCATGCTCTGCCCTTTCG...AAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp ATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGTCTTCTTACCAGGCCCTCGCGTaGGCCTCAAAGCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: ISWWQARLSPDTHLGLSSYQALA*ASKPGL
Trigger: CAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTA...AGAAGACAGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCCAGTCTCCGGCTGCCTaGTTCACGCTGGAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPQSPAA*FTLEPV
Trigger: TACTGGCTCCAGCGTGAAGCAGGCAGCCGGAGACTG...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCTGGTCTCCTGGGCCCTaGCCCTGGAAAAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PASCVGKSSPLALRSREGWSPGP*PWKRLS
Trigger: GCTGAGCCTTTTCCAGGGGCAGGGCCCAGGAGACCA...GCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCGCCCGCGGCCCAAGCTaGCCGGTTTGGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSARGPS*PVWAAE
Trigger: CTCAGCAGCCCAAACCGGCCAGCTTGGGCCGCGGGC...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGATCACATAAGCTGGTaGCAGGCCAGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTADHISW*QARLSP
Trigger: CGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATC...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGAAAGTCCAGCCCCCTaGCCCTTCGTTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAGALATAPWILGMVSWESPAP*PFVPGR
Trigger: CCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTC...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCGAAGCCCTGCAGAGTTaGGCTGGTGTGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPEALQS*AGVHLP
Trigger: TGGCAGGTGCACACCAGCCCAACTCTGCAGGGCTTC...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAACCGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTGAGGACACAGCCAGCGCCGGGGCCCTTTaGAGTAGCTGCGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PTVWLQHTHPSRVTEDTASAGAL*SSCAAG
Trigger: CCCGGCTGCGCAGCTACTGCAAAGGGCCCCGGCGCT...GGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGACCCGCAATGCCCAGTaGCAGTCTCCGGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QCPPGSTQRLGRPASFARTRNAQ*QSPAAC
Trigger: GCAGGCAGCCGGAGACTGGCACTGGGCATTGCGGGT...CCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAACCGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTGAGGACACAGCCTGGCCCCAGGGGCCCTaGGGCCCAAACCTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTVWLQHTHPSRVTEDTAWPQGP*GPNLGL
Trigger: CAGCCCTAGGTTTGGGCCGCAGGGCCCCTGGGGCCA...GGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGGAGGCCTGGGCCACCTaGTCTCCGTATGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QCPPGSTQRLGRPASFAREAWAT*SPYGPG
Trigger: CCCTGGACCATACGGAGAGCAGGTGGCCCAGGCCTC...CCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GCTCTGGGGCAGGAAGCTTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTCTGAGCAGTGGTCCCTaGATACCAGGCCCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: ALGQEALWIAASSSSRSPLSSGP*IPGPRV
Trigger: CACGCGAGGGCCTGGTATGCAGGGACCACTGCTCAG...AGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCCAGGGAGAGAAGCCCTaGAGAGTTGGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PASCVGKSSPLALRSREGQGEKP*RVGLVC
Trigger: GCACACCAGCCCAACTCTGCAGGGCTTCTCTCCCTG...GCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCCTGCATCCTGGTGTGTaGATGGATGGGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPLHPGV*MDGRWV
Trigger: CACCCACCTCCCATCCATGCACACACCAGGATGCAG...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCCACTGCCCAGTGGGATaGCGAAGTAGAAGACGGACA +
Preference number: 4 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLHCPVG*RSRRRT
Trigger: TGTCCGTCTTCTACTTCGCCATCCCACTGGGCAGTG...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATACCGCGTCCCCCAGCAGGTaGGAGGTGAAGCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ASNIPKVRGPAEQWSLHTASPSR*EVKLCK
Trigger: CTTGCAGAGCTTCACCTCCCACCTGCTGGGGGACGC...GGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATGGATTCTGGGAATaGTCTCCTGGGCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PVPDAVGHLPDEVGVWVLHGFWE*SPGPCP
Trigger: GGGGCAGGGCCCAGGAGACCATTCCCAGAATCCATG...AAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GAAGCCCTGCAGAGTTGGGCTGGTGTGCACCTGCCAGAGACCTTGAGCCTGGGGCTGCCCCATGGATTCTaGGAATGGTCTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EALQSWAGVHLPETLSLGLPHGF*EWSPGP
Trigger: GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAG...CCCCAGGCTCAAGGTCTCTGGCAGGTGCACACCAGCCCAACTCTGCAGGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGCTGCTTCCTCCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAACAGCAGCCGGAGCCCTaGCTACTGCCCCATGGATTC +
Preference number: 4 (lower is better)
Translates to: SCFLQQPEPWLLPHGFWEQQPEP*LLPHGF
Trigger: GAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTG...TTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCCCTCAGCCTCAGCTCTaGGGCAGGAAGCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPPQPQL*GRKLCG
Trigger: TCCACAAAGCTTCCTGCCCCAGAGCTGAGGCTGAGG...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CTTGTCAGGCCCTCGGGGTACCCCAGAGCTTGGTGGGTGAGTATTCCACCTGCTCCAGCAGCCAGTGTTTaGGTAGGGGCCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVRPSGYPRAWWVSIPPAPAASV*VGAASP
Trigger: GGGAGAGGCGGCCCCTACCCAAACACTGGCTGCTGG...AGCAGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp ATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCCTGGGTACCCCAGAGCTTGGTaGGTGAGTATTCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: IPGPRVSLKAGTAALRPGYPRAW*VSIPPA
Trigger: AGCAGGTGGAATACTCACCCACCAAGCTCTGGGGTA...CCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp GCTCTGGGGCAGGAAGCTTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTGCCAACCCGAGACAGTaGGACAGTGTCCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ALGQEALWIAASSSSRSPANPRQ*DSVLQG
Trigger: TCCCTGGAGGACACTGTCTCACTGTCTCGGGTTGGC...AGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCCTGCTTACACACCACTaGAGCCACAGCCAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTALLTHH*SHSQPV
Trigger: TACTGGCTGGCTGTGGCTTCAGTGGTGTGTAAGCAG...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCATTCCAGGCACATCATaGCGGCCCGGATCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSIPGTS*RPGSGR
Trigger: CCGCCCCGATCCGGGCCGGCATGATGTGCCTGGAAT...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp ACAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGAGGGGACACCCGCAATaGCCAGTGCCAGTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TVSSREYPETWAPSFICQRGHPQ*PVPVSG
Trigger: GCCGGAGACTGGCACTGGGCATTGCGGGTGTCCCCT...CTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGTCTCTGCTGTCTTCTaGACAACTTGGGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PAAGALATAPWILGMVSWVSAVF*TTWARC
Trigger: GCACCGCGCCCAAGTTGTGCAGAAGACAGCAGAGAC...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCAGGCTCCTACGATGCTaGTCTTGGCAGCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTARLLRC*SWQPRR
Trigger: TCTTCGTGGCTGCCAAGAGCAGCATCGTAGGAGCCT...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp TCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCGCCCAGCTTCATTTaGCAGGTTGCGTCCAATATC +
Preference number: 4 (lower is better)
Translates to: SLHTRPSREPQSRDCRPEAPSFI*QVASNI
Trigger: GATATTGGACGCAACCTGGCAAATGAAGCTGGGCGC...CTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCTCTTGTCAGGCCCTCGGGGTACCCCAGAGCTTGGTGGGTGAGTATTCCACCTCAGGTGGTGTACAGCTaGAGCCAGGGCCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: PLVRPSGYPRAWWVSIPPQVVYS*SQGLHP
Trigger: GGGGTGAAGGCCCTGGCTGCAGCTGTACACCACCTG...AGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTCCAAGCTGGCCGGTTTaGGCTGCTGAGCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLPSWPV*AAERRG
Trigger: GCCCCGGCGCTCAGCAGCCCAAACCGGCCAGCTTGG...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GAAGCCCTGCAGAGTTGGGCTGGTGTGCACCTGCCAGAGACCTTGAGCCTGGGGCAGGCCACTGCCCAGTaGGATGGCGAAGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: EALQSWAGVHLPETLSLGQATAQ*DGEVED
Trigger: GTCTTCTACTTCGCCATCCCACTGGGCAGTGGCCTG...CCCCAGGCTCAAGGTCTCTGGCAGGTGCACACCAGCCCAACTCTGCAGGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCCACGGCACACACCAGTaGGTCGGCCCGCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSHGTHQ*VGPLGL
Trigger: AAGACCCAGCGGGCCGACCCACTGGTGTGTGCCGTG...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCACCTGTCCAACCGTGTaGCTCCAACACACACATCCT +
Preference number: 4 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLTCPTV*LQHTHP
Trigger: AGGATGTGTGTGTTGGAGCCACACGGTTGGACAGGT...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGATCACATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGCCCAGCAAGTTGTGTaGGAAAGTCCAGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSHKLVAGQALPGHPLGAAQQVV*ESPAPW
Trigger: CCAGGGGGCTGGACTTTCCCACACAACTTGCTGGGC...AGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp ACAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGTGCCGCCCTGAGGCCTaGGCCACCTGCTCTCCGTAT +
Preference number: 4 (lower is better)
Translates to: TVSSREYPETWAPSFICQCRPEA*ATCSPY
Trigger: ATACGGAGAGCAGGTGGCCCAGGCCTCAGGGCGGCA...CTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGATCACATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTTCCCCCAAAGCGGGTTaGGGCTGGTGTGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RSHKLVAGQALPGHPLGASPKAG*GWCEVG
Trigger: GCCAACTTCACACCAGCCCCAACCCGCTTTGGGGGA...AGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGCATATCTCGGAGCCATaGGGTCCGGGCCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QCPPGSTQRLGRPASFARHISEP*GPGLEL
Trigger: CAGCTCAAGGCCCGGACCTCATGGCTCCGAGATATG...CCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp AGCTGCTTCCTCCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAAGACACAGCCTCTTCTTaGTGCCAGGGCCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: SCFLQQPEPWLLPHGFWEDTASS*CQGHSA
Trigger: TGCTGAGTGGCCCTGGCATCAAGAAGAGGCTGTGTC...TTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCCCAGAGCTTGGTGGGTaGGTATTCCACCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTAPELGG*VFHLLT
Trigger: TGTAAGCAGGTGGAATACTCACCCACCAAGCTCTGG...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp AGCTGCTTCCTCCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAACGGAGCCCTGGCTACTaGCCCATGGATTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SCFLQQPEPWLLPHGFWERSPGY*PMDSGN
Trigger: ATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCG...TTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCCTGGGACCTCCAGGCTaGGAGCCAACCCGAGACAGT +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSLGPPG*EPTRDS
Trigger: ACTGTCTCGGGTTGGCTCCCAGCCTGGAGGTCCCAG...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCTCTTGTCAGGCCCTCGGGGTACCCCAGAGCTTGGTGGGTGAGTATTCCACCTAGAACAGTCCCCATCTaGGACCTCCAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLVRPSGYPRAWWVSIPPRTVPI*DLQAGS
Trigger: GCTCCCAGCCTGGAGGTCCCAGATGGGGACTGTTCT...AGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAACCGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTGAGGACACAGCCGCCTGGGGGCACAGGTaGTGTACAGCTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTVWLQHTHPSRVTEDTAAWGHR*CTAAAR
Trigger: CCTGGCTGCAGCTGTACACCACCTGTGCCCCCAGGC...GGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGCTGCTTCCTCCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAACCTGGGGTCACTTGGTaGAATGCCAGCAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SCFLQQPEPWLLPHGFWEPGVTW*NASSQC
Trigger: ACACTGGCTGCTGGCATTCCACCAAGTGACCCCAGG...TTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGATCACATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTAAAGCGGGTTGGGGCTaGTGTGAAGTTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSHKLVAGQALPGHPLGAKAGWG*CEVGSC
Trigger: GCAGCTGCCAACTTCACACCAGCCCCAACCCGCTTT...AGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CAA 72 bp ACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGTaGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TQRLGRPASFAR*RPISPRSEAQL
Trigger: CAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTGGTCCGAGGCCCAGCTaGGCAGTGGTCCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLGPRPS*AVVPAY
Trigger: GTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACC...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CTTGTCAGGCCCTCGGGGTACCCCAGAGCTTGGTGGGTGAGTATTCCACCTGCTCACAGGGCGGGCTGTTaGACGTCTCTGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVRPSGYPRAWWVSIPPAHRAGC*TSLLSS
Trigger: AGAAGACAGCAGAGACGTGCAACAGCCCGCCCTGTG...AGCAGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GCTCTGGGGCAGGAAGCTTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTGGGAGGGCAGGGACTTaGCCAAGATCACATAAGCTG +
Preference number: 4 (lower is better)
Translates to: ALGQEALWIAASSSSRSPGRAGT*PRSHKL
Trigger: CAGCTTATGTGATCTTGGGCAAGTCCCTGCCCTCCC...AGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp AGATCACATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTAGCTTTGTGGATAGCTaGTTCCTCCAGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RSHKLVAGQALPGHPLGASFVDS*FLQQPE
Trigger: CTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCT...AGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATAAGGAGACAGCCGACGTaGCCAGGGAGGAGAAGACGT +
Preference number: 4 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIRRQPT*PGRRRR
Trigger: ACGTCTTCTCCTCCCTGGCCACGTCGGCTGTCTCCT...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp ATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGTCTTCTCTACGATGCTGCTCTTaGCAGCCACGAAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: ISWWQARLSPDTHLGLSSLRCCS*QPRRSG
Trigger: GCCTGATCTTCGTGGCTGCCAAGAGCAGCATCGTAG...AGAAGACAGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCCTGGGAATGGTCTCCTaGGCCCTGCCCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSLGMVS*ALPLEK
Trigger: CTTTTCCAGGGGCAGGGCCCAGGAGACCATTCCCAG...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGCTGCTTCCTCCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAACTGGCTACTGCCCCATaGATTCTGGGAATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SCFLQQPEPWLLPHGFWELATAP*ILGMVS
Trigger: GGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAG...TTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGGAGGAAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp ACAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGTGCATGGATGGGAGGTaGGTGATCGAAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TVSSREYPETWAPSFICQCMDGR*VIEGLA
Trigger: GGCCAGGCCTTCGATCACCCACCTCCCATCCATGCA...CTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATACCGGGTACCCCAGAGCTTaGTGGGTGAGTATTCCACCT +
Preference number: 4 (lower is better)
Translates to: ASNIPKVRGPAEQWSLHTGYPRA*WVSIPP
Trigger: AGGTGGAATACTCACCCACCAAGCTCTGGGGTACCC...GGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CAA 72 bp CAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTaGCCAGGTTGCGTCCAATATCCCCAAGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: QGVPRDLGAQLH*PGCVQYPQGPR
Trigger: CCTCGGACCTTGGGGATATTGGACGCAACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CTTGTCAGGCCCTCGGGGTACCCCAGAGCTTGGTGGGTGAGTATTCCACCTGCTCGAAGATCAGGCAGATaGAGATGGCAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVRPSGYPRAWWVSIPPARRSGR*RWQSPA
Trigger: TGCTGGGCTCTGCCATCTTCATCTGCCTGATCTTCG...AGCAGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp AAGAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGCTGCCCGACAGCGTCTaGACCTCATCGCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: KRRQHSDLVLVQQENIAGLPDSV*TSSPAA
Trigger: GGCCGCGGGCGATGAGGTGCAGACGCTGTCGGGCAG...CCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp AGATCACATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTTCCTTGACCCCAAAGTaGTGCTGGATGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSHKLVAGQALPGHPLGASLTPK*CWMSRR
Trigger: CCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGA...AGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTATGTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATACCTATAGGCTCCTACGATaGTGCTCTTGGCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: ASNIPKVRGPAEQWSLHTYRLLR*CSWQPR
Trigger: TCGTGGCTGCCAAGAGCAGCATCGTAGGAGCCTATA...GGTATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGTTTCAGACTTTCACAGATaGGGGCGGCATCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VSSREYPETWAPSFICQVSDFHR*GRHRQL
Trigger: CAGCTGGCGATGCCGCCCGCATCTGTGAAAGTCTGA...AACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GAAGCCCTGCAGAGTTGGGCTGGTGTGCACCTGCCAGAGACCTTGAGCCTGGGGCAGAACCACCTTGATTaGAGCAGAAGTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: EALQSWAGVHLPETLSLGQNHLD*SRSAGS
Trigger: ACTCCCTGCACTTCTGCTGCAATCAAGGTGGTTCTG...CCCCAGGCTCAAGGTCTCTGGCAGGTGCACACCAGCCCAACTCTGCAGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTACCCCTTTTAGTGGCTaGGACCAGAATGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: PVPDAVGHLPDEVGVWVLTPFSG*DQNEDE
Trigger: CTCATCCTCATTCTGGTCCCAGCCACTAAAAGGGGT...AAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTAGTGGGTCGGCCCGCTaGGTCTTCAGGCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: PGSVESSKLQIVLCPASCSGSAR*VFRRHQ
Trigger: CTGGTGCCGCCTGAAGACCCAGCGGGCCGACCCACT...ACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATACGAAGAAGAGCGCAGTaGCGAGGAAGAACATGCCGC +
Preference number: 4 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIRRRAQ*RGRTCR
Trigger: GCGGCATGTTCTTCCTCGCCACTGCGCTCTTCTTCG...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGACGAGGTGGGAGTGTaGGTTCTTCATTGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PAAGALATAPWILGMVSWDEVGV*VLHCPN
Trigger: ATTGGGACAATGAAGAACCCACACTCCCACCTCGTC...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGTTGGCAGCTGCATCCTaGTGTGTGCATGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: QCPPGSTQRLGRPASFARLAAAS*CVHGWE
Trigger: CTCCCATCCATGCACACACCAGGATGCAGCTGCCAA...CCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp TCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGGCAACACTCGGACCTaGTTCTTGTACAACAAGAAA +
Preference number: 4 (lower is better)
Translates to: SLHTRPSREPQSRDCRPEGNTRT*FLYNKK
Trigger: TTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCC...CTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCAACCGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTGAGGACACAGCCGAATCACCTTCCTGTTaGAGCGGTCGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PTVWLQHTHPSRVTEDTAESPSC*SGRPGS
Trigger: GCTACCTGGGCGACCGCTTCAACAGGAAGGTGATTC...GGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCTTCACCCCTGGTGATGCCAGCTTGTCAGAACAGTCCCCATCTGGGACCTCCAAGAAGACGGACAGCATaGGCGTACGCGTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSPLVMPACQNSPHLGPPRRRTA*AYACSW
Trigger: CCAAGAACACGCGTACGCTCATGCTGTCCGTCTTCT...TGGAGGTCCCAGATGGGGACTGTTCTGACAAGCTGGCATCACCAGGGGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCAACCGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTGAGGACACAGCCGGCCTTCACCCCTGGTaGTGCCAGCTTGTCAGAACA +
Preference number: 4 (lower is better)
Translates to: PTVWLQHTHPSRVTEDTAGLHPW*CQLVRT
Trigger: TGTTCTGACAAGCTGGCATCACCAGGGGTGAAGGCC...GGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCCAGATGAACACTGACTaGAGCAGGCCGGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGQMNTD*SRPAPR
Trigger: CCGAGGCGCCGGCCTGCTGCAGTCAGTGTTCATCTG...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTGCCAGTCTCCGGCTaGCTGCTTCACGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VQGLLSLQSCRSCFAQQVVPVSG*LLHAGA
Trigger: GGCTCCAGCGTGAAGCAGGCAGCCGGAGACTGGCAC...AACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GCTCTGGGGCAGGAAGCTTTGTGGATAGCTGCTTCCTCCAGCAGCCGGAGCCCTGGTGAGTATTCCACCTaGTTACACACCACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: ALGQEALWIAASSSSRSPGEYST*LHTTEA
Trigger: GGCTTCAGTGGTGTGTAAGCAGGTGGAATACTCACC...AGGGCTCCGGCTGCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AAGAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGTCCGGGCCTTGAGCTaGTCCCCGAGCTGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: KRRQHSDLVLVQQENIAGVRALS*SPSWSA
Trigger: TGCCGACCAGCTCGGGGACCAGCTCAAGGCCCGGAC...CCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGTTGGGCAGGAAGCTTTGTaGATAGCTGCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSSREYPETWAPSFICQVGQEAL*IAASSS
Trigger: GCTGGAGGAAGCAGCTATCCACAAAGCTTCCTGCCC...AACCTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCGTCCAAGCTGGCTCTTaGGGGGTCCCCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGVQAGS*GVPHWP
Trigger: TGGCCAATGGGGGACCCCCCAAGAGCCAGCTTGGAC...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CAA 72 bp CCTGGGCCACCTGCTCTCCGTATGGTCCAGGGTCTGTaGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGPPALRMVQGL*SLQSCRSCFAQ
Trigger: CTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGACCATACGGAGAGCAGGTGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CAA 72 bp CCATCCTCTTGTCAGGCCCTCGGGGTACCCCAGAGCTaGGTGGGTGAGTATTCCACCTGCTTACACACCACT +
Preference number: 4 (lower is better)
Translates to: PSSCQALGVPQS*VGEYSTCLHTT
Trigger: AGTGGTGTGTAAGCAGGTGGAATACTCACCCACCAAGCTCTGGGGTACCCCGAGGGCCTGACAAGAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTGCTACAGATGAACACTaGCTGCAGCAGGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: PGSVESSKLQIVLCPASCATDEH*LQQAGA
Trigger: GGCGCCGGCCTGCTGCAGTCAGTGTTCATCTGTAGC...ACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCTTCACCCCTGGTGATGCCAGCTTGTCAGAACAGTCCCCATCTGGGACCTCCATCCTTCCAGGGTAACTaGGGACACAGCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PSPLVMPACQNSPHLGPPSFQGN*GHSLFL
Trigger: CAAGAAGAGGCTGTGTCCTCAGTTACCCTGGAAGGA...TGGAGGTCCCAGATGGGGACTGTTCTGACAAGCTGGCATCACCAGGGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp ATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGTCTTCTCTTCATTTGCCAGGTTaGGTCCAATATCCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ISWWQARLSPDTHLGLSSLHLPG*VQYPQG
Trigger: ACCTTGGGGATATTGGACGCAACCTGGCAAATGAAG...AGAAGACAGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCTGTGAAGTTGGCAGCTaGATCCTGGTGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSCEVGS*ILVCAW
Trigger: CCATGCACACACCAGGATGCAGCTGCCAACTTCACA...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AAGAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGGCGGCATCGCCAGCTaGTTCACCTGCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KRRQHSDLVLVQQENIAGGGIAS*FTCCSA
Trigger: GGCTGAGCAGCAGGTGAACCAGCTGGCGATGCCGCC...CCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAACCGTGTGGCTCCAACACACACATCCTTCCAGGGTAACTGAGGACACAGCCGAGTACCCAGAGACTTaGGCGCCCAGCTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: PTVWLQHTHPSRVTEDTAEYPET*APSFIC
Trigger: GCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTC...GGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTGTTGGAGCCACACGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTCCCCCTGGGGTCACTTaGTGGAATGCCAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGSVESSKLQIVLCPASCPPGVT*WNASSQ
Trigger: CTGGCTGCTGGCATTCCACCAAGTGACCCCAGGGGG...ACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCAATAAAGGAGCAGTTTaGCTTCCGGAAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PASCVGKSSPLALRSREGNKGAV*LPEGRG
Trigger: TCCTCTTCCTTCCGGAAGCCAAACTGCTCCTTTATT...GCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
3UTR CAA 72 bp GTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTaGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTC +
Preference number: 4 (lower is better)
Translates to: VFKAADRALPSK*CGKVQPPGPSF
Trigger: GAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp CCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTTCTCTCTTAAGACTCTaGGATTCACAATCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PVPDAVGHLPDEVGVWVLSLLRL*DSQSAA
Trigger: AGCTGCTGATTGTGAATCTCAGAGTCTTAAGAGAGA...AAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATTGTCCCAAAGCTGCAGATCGTaGTTTGCCCAGCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GRCRTPPRRGGSVGSSLSQSCRS*FAQQVV
Trigger: CACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTG...GGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATAGAGTCCTTAGTGCTCTaGCGGATCAGGTCTGAGATA +
Preference number: 4 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIESLVL*RIRSEI
Trigger: TATCTCAGACCTGATCCGCCAGAGCACTAAGGACTC...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTTGGTGTGTGCATGGATaGGAGGTGGGTGATCGAAGG +
Preference number: 4 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLWCVHG*EVGDRR
Trigger: CCTTCGATCACCCACCTCCCATCCATGCACACACCA...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp GTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTAGTGGGGGTGGAGGCTaGTCTTTGGAGGATGCCACC +
Preference number: 4 (lower is better)
Translates to: VQGLLSLQSCRSCFAQQVSGGGG*SLEDAT
Trigger: GGTGGCATCCTCCAAAGACCAGCCTCCACCCCCACT...AACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCTTCACCCCTGGTGATGCCAGCTTGTCAGAACAGTCCCCATCTGGGACCTCCATCTTCATTGTCCCAATaGCACCACCTCAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: PSPLVMPACQNSPHLGPPSSLSQ*HHLRLS
Trigger: TGAAAGTCTGAGGTGGTGCCATTGGGACAATGAAGA...TGGAGGTCCCAGATGGGGACTGTTCTGACAAGCTGGCATCACCAGGGGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp AAGAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCACCAGAACCACCTTaGTTGCAGCAGAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KRRQHSDLVLVQQENIAGAPEPP*LQQKCR
Trigger: CCTGCACTTCTGCTGCAATCAAGGTGGTTCTGGTGC...CCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp CCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTCTGCAGATCGTGCTTTaGCCAGCAAGTTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGSVESSKLQIVLCPASCLQIVL*PASCVG
Trigger: TCCCACACAACTTGCTGGGCAAAGCACGATCTGCAG...ACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CCA 90 bp CCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTAGCCAGAAGTACTGCTaGGGAATGAAGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGSVESSKLQIVLCPASCSQKYC*GMKELE
Trigger: CTCCAGCTCCTTCATTCCCCAGCAGTACTTCTGGCT...ACAACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR TCA 90 bp GTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTTGGTCCAGGGTCTGTTaGGTCTTCAAAGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VQGLLSLQSCRSCFAQQVWSRVC*VFKAAD
Trigger: ATCTGCAGCTTTGAAGACTCAACAGACCCTGGACCA...AACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR GCA 90 bp GTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGTACATGAGGATGTCTaGAGTGATGGCCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: VQGLLSLQSCRSCFAQQVVHEDV*SDGPVR
Trigger: TCTAACTGGGCCATCACTGCAGACATCCTCATGTAC...AACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS GCA 90 bp CAGGCTGGGCCCGCTCAGCGCGTGCGTGCGCCGCGGAGCCGCCACTaGACCATCCTGGTCGGGCCCCGTCGGCTCCTGCGCTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: QAGPAQRVRAPRSRH*TILVGPRRLLRSGP
Trigger: GGGGCCGGAGCGCAGGAGCCGACGGGGCCCGACCAGGATGGTGCAGTGGCGGCTCCGCGGCGCACGCACGCGCTGAGCGGGCCCAGCCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS GCA 90 bp CGCGGAGCCGCCACTGCACCATCCTGGTCGGGCCCCGTCGGCTCCTaGGCTCCGGCCCCGGCTGCGGCGCTGCCACCGCTCAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: RGAATAPSWSGPVGS*APAPAAALPPLSSL
Trigger: CAGCGAGCTGAGCGGTGGCAGCGCCGCAGCCGGGGCCGGAGCGCAGGAGCCGACGGGGCCCGACCAGGATGGTGCAGTGGCGGCTCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CCA 90 bp ATCAGCGGGGGCCGGGCCCGGGCACTGCTCTGGCACATCGTGTCGTaGGGGCCAGCTGACCGGAGGTGCTGGGCAGGGACCTCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ISGGRARALLWHIVS*GPADRRCWAGTSSA
Trigger: GGCTGACGAGGTCCCTGCCCAGCACCTCCGGTCAGCTGGCCCCCACGACACGATGTGCCAGAGCAGTGCCCGGGCCCGGCCCCCGCTGAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570979.1
CDS CCA 90 bp GGGTCAGGGTGGTGCATCAGCGGGGGCCGGGCCCGGGCACTGCTCTaGCACATCGTGTCGTGGGGGCCAGCTGACCGGAGGTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GSGWCISGGRARALL*HIVSWGPADRRCWA
Trigger: TGCCCAGCACCTCCGGTCAGCTGGCCCCCACGACACGATGTGCCAGAGCAGTGCCCGGGCCCGGCCCCCGCTGATGCACCACCCTGACCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570979.1
CDS GCA 90 bp GTCCAGGTAGTTGAGCACGTTGCCCAAGCTGAGGATGGCGGCGGCTaGCCCCCGCCCGCGGCCCAAGCTGGCCGGTTTGGGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VQVVEHVAQAEDGGG*PPPAAQAGRFGLLS
Trigger: GCTCAGCAGCCCAAACCGGCCAGCTTGGGCCGCGGGCGGGGGGCAGCCGCCGCCATCCTCAGCTTGGGCAACGTGCTCAACTACCTGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CCA 90 bp GGGCGCGGTGCAGGTAGAGCGGGATCCACATGCCCAGGGCCCCCGTaGCGAAGGAGACAGCCGACGTGGCCAGGGAGGAGAAGACGTAGC +
Preference number: 5 (lower is better)
Translates to: GRGAGRAGSTCPGPP*RRRQPTWPGRRRRS
Trigger: GCTACGTCTTCTCCTCCCTGGCCACGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCATGTGGATCCCGCTCTACCTGCACCGCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS GCA 90 bp TGGGTCGGCCCGCTGGGTCTTCAGGCGGCACCAGCGCGTGGCTCCTaGCCCCGTGACCACGCCCAGAAATCCCGTAAAGCAGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: WVGPLGLQAAPARGS*PRDHAQKSRKAGDG
Trigger: GCCATCACCTGCTTTACGGGATTTCTGGGCGTGGTCACGGGGGCAGGAGCCACGCGCTGGTGCCGCCTGAAGACCCAGCGGGCCGACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571386.1
ENST00000576635.6
CDS CCA 90 bp GCAGATGAAGATGGCAGAGCCCAGCATGCCCACGGCACACACCAGTaGGTCGGCCCGCTGGGTCTTCAGGCGGCACCAGCGCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ADEDGRAQHAHGTHQ*VGPLGLQAAPARGS
Trigger: GGAGCCACGCGCTGGTGCCGCCTGAAGACCCAGCGGGCCGACCCACTGGTGTGTGCCGTGGGCATGCTGGGCTCTGCCATCTTCATCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571386.1
ENST00000576635.6
CDS GCA 90 bp TCTTCTGCACAACTTGGGCGCGGTGCAGGTAGAGCGGGATCCACATaGCCAGGGCCCCCGTGGCGAAGGAGACAGCCGACGTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SSAQLGRGAGRAGST*PGPPWRRRQPTWPG
Trigger: CCCTGGCCACGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCATGTGGATCCCGCTCTACCTGCACCGCGCCCAAGTTGTGCAGAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGCCGGCGCCTCGGTCCTaGACCCCAAAGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PAAGALATAPWILGMVSWPAPRS*TPKCCW
Trigger: CCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGG...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCCATGAGGTCCGGGCCTaGAGCTGGTCCCCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PASCVGKSSPLALRSREGHEVRA*SWSPSW
Trigger: CCAGCTCGGGGACCAGCTCAAGGCCCGGACCTCATG...GCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp ATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCCTGGGGGACACAGCCTCTTCTaGATGCCAGGGCCACTCAGC +
Preference number: 5 (lower is better)
Translates to: IPGPRVSLKAGTAALRPGGHSLF*MPGPLS
Trigger: GCTGAGTGGCCCTGGCATCAAGAAGAGGCTGTGTCC...CCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGCCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGCTGGGGCAGGAAGCTTaGTGGATAGCTGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: WGSPAGPGRCRTPPRRGGLGQEA*WIAASS
Trigger: GGAGGAAGCAGCTATCCACAAAGCTTCCTGCCCCAG...CCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGGCTGGGCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 90 bp GCATCGCCAGCTGGTTCACCTGCTGCTCAGCCCTGGCGCGGTCGCTaGCGAAGAAGAGCGCAGTGGCGAGGAAGAACATGCCGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ASPAGSPAAQPWRGR*RRRAQWRGRTCRPG
Trigger: TCCTGGGCGGCATGTTCTTCCTCGCCACTGCGCTCTTCTTCGTCAGCGACCGCGCCAGGGCTGAGCAGCAGGTGAACCAGCTGGCGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571668.5
ENST00000576635.6
CDS CCA 90 bp GGATCCACATGCCCAGGGCCCCCGTGGCGAAGGAGACAGCCGACGTaGCCAGGGAGGAGAAGACGTAGCTGCGGTTTCGAATCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: GSTCPGPPWRRRQPT*PGRRRRSCGFESGP
Trigger: AGGCCCTGATTCGAAACCGCAGCTACGTCTTCTCCTCCCTGGCCACGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCATGTGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 90 bp CGAGGAAGAACATGCCGCCCAGGACCACGACGAAAGGGCAGAGCATaGGCGCGTAGCCCAGGCTCAGGAACTCCCAGAGCGGGGAGTCCT +
Preference number: 5 (lower is better)
Translates to: RGRTCRPGPRRKGRA*ARSPGSGTPRAGSP
Trigger: AGGACTCCCCGCTCTGGGAGTTCCTGAGCCTGGGCTACGCGCTCATGCTCTGCCCTTTCGTCGTGGTCCTGGGCGGCATGTTCTTCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329078.8
ENST00000570641.1
ENST00000571668.5
ENST00000573990.1
ENST00000576635.6
CDS GCA 90 bp ACTGACTGCAGCAGGCCGGCGCCTCGGTCCTTGACCCCAAAGTGCTaGTGGATGTCCAGAAGGACGCCTGCCACGGTGTACCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TDCSRPAPRSLTPKC*WMSRRTPATVYLSR
Trigger: CCTGGACAGGTACACCGTGGCAGGCGTCCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGGCCTGCTGCAGTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCCCACAGGGCGGGCTGTaGCACGTCTCTGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: PASCVGKSSPLALRSREGPQGGL*HVSAVF
Trigger: GAAGACAGCAGAGACGTGCAACAGCCCGCCCTGTGG...GCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp ATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGCCCTGAGGCCTGGGCGCACCAGAACCACCTaGATTGCAGCAGAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: IPGPRVSLKAGTAALRPGRTRTT*IAAEVQ
Trigger: CTGCACTTCTGCTGCAATCAAGGTGGTTCTGGTGCG...CCCAGGCCTCAGGGCGGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp AGCAGTGGTCCCTGCATACCAGGCCCTCGCGTGAGCCTCAAAGCCGGGACTGCCGGGGTACCCCAGAGCTaGGTGGGTGAGTATTCCACC +
Preference number: 5 (lower is better)
Translates to: SSGPCIPGPRVSLKAGTAGVPQS*VGEYST
Trigger: GGTGGAATACTCACCCACCAAGCTCTGGGGTACCCC...GGCAGTCCCGGCTTTGAGGCTCACGCGAGGGCCTGGTATGCAGGGACCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS GCA 90 bp AACACTGACTGCAGCAGGCCGGCGCCTCGGTCCTTGACCCCAAAGTaGTGCTGGATGTCCAGAAGGACGCCTGCCACGGTGTACCTGTCC +
Preference number: 5 (lower is better)
Translates to: NTDCSRPAPRSLTPK*CWMSRRTPATVYLS
Trigger: GGACAGGTACACCGTGGCAGGCGTCCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGGCCTGCTGCAGTCAGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCAGCGTACGCGTGTTCTaGGTGAAGAGGTCGCCAATG +
Preference number: 5 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLSVRVF*VKRSPM
Trigger: CATTGGCGACCTCTTCACCAAGAACACGCGTACGCT...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCTGTCTTCTGCACAACTaGGGCGCGGTGCAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPCLLHN*GAVQVE
Trigger: CTCTACCTGCACCGCGCCCAAGTTGTGCAGAAGACA...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 90 bp GACGTAGCTGCGGTTTCGAATCAGGGCCTTCATATCTCGGAGCCATaGGGTCCGGGCCTTGAGCTGGTCCCCGAGCTGGTCGGCATGACC +
Preference number: 5 (lower is better)
Translates to: DVAAVSNQGLHISEP*GPGLELVPELVGMT
Trigger: GGTCATGCCGACCAGCTCGGGGACCAGCTCAAGGCCCGGACCTCATGGCTCCGAGATATGAAGGCCCTGATTCGAAACCGCAGCTACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CAGGGGCCCTGCGGCCCAAACCTAGGGCTGGGAACCTGTCCAACCGTGTGGCTCAGTGTGGGTTCTTCATaGTCCCAATGGCACCACCTC +
Preference number: 5 (lower is better)
Translates to: QGPCGPNLGLGTCPTVWLSVGSS*SQWHHL
Trigger: GAGGTGGTGCCATTGGGACAATGAAGAACCCACACT...GAGCCACACGGTTGGACAGGTTCCCAGCCCTAGGTTTGGGCCGCAGGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CCAGCAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCTGCAGATCGTGCTTaGCCCAGCAAGTTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: PAAGALATAPWILGMVSWAADRA*PSKLCG
Trigger: CCCACACAACTTGCTGGGCAAAGCACGATCTGCAGC...CCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 90 bp AGGCTCCTACGATGCTGCTCTTGGCAGCCACGAAGATCAGGCAGATaGAGATGGCAGAGCCCAGCATGCCCACGGCACACACCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: RLLRCCSWQPRRSGR*RWQSPACPRHTPVG
Trigger: ACCCACTGGTGTGTGCCGTGGGCATGCTGGGCTCTGCCATCTTCATCTGCCTGATCTTCGTGGCTGCCAAGAGCAGCATCGTAGGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571386.1
ENST00000576635.6
CDS-3UTR CAA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATAGGGGCTGGTGTGAAGTaGGCAGCTGCATCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIGAGVK*AAASWC
Trigger: ACACCAGGATGCAGCTGCCAACTTCACACCAGCCCC...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CCA 90 bp CCGGTCCCGGACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTaGGTTCTTCATTGTCCCAATGGCACCACCTCAGACTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: PVPDAVGHLPDEVGV*VLHCPNGTTSDFHR
Trigger: TCTGTGAAAGTCTGAGGTGGTGCCATTGGGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTCCGGGACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329078.8
ENST00000570979.1
ENST00000571386.1
ENST00000571668.5
ENST00000573106.1
ENST00000576635.6
CDS-3UTR CAA 90 bp TTGCGTCCAATATCCCCAAGGTCCGAGGCCCAGCTGAGCAGTGGTCCCTGCATACCTACGATGCTGCTCTaGGCAGCCACGAAGATCAGG +
Preference number: 5 (lower is better)
Translates to: LRPISPRSEAQLSSGPCIPTMLL*AATKIR
Trigger: CCTGATCTTCGTGGCTGCCAAGAGCAGCATCGTAGG...TATGCAGGGACCACTGCTCAGCTGGGCCTCGGACCTTGGGGATATTGGACGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp ACAGTGTCCTCCAGGGAGTACCCAGAGACTTGGGCGCCCAGCTTCATTTGCCAGGCTTTGCCCAGCAAGTaGTGTGGGAAAGTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: TVSSREYPETWAPSFICQALPSK*CGKVQP
Trigger: GGGCTGGACTTTCCCACACAACTTGCTGGGCAAAGC...CTGGCAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCCCTGGAGGACACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CCAGCAAGTTGTGTGGGAAAGTCCAGCCCCCTGGCCCTTCGTTCCAGGGAGGGCATGGTCCAGGGTCTGTaGAGTCTTCAAAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PASCVGKSSPLALRSREGMVQGL*SLQSCR
Trigger: TCTGCAGCTTTGAAGACTCAACAGACCCTGGACCAT...GCCCTCCCTGGAACGAAGGGCCAGGGGGCTGGACTTTCCCACACAACTTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp ATAAGCTGGTGGCAGGCCAGGCTCTCCCCGGACACCCACTTGGGGCTGTCTTCTGCTTCATTTGCCAGGTaGCGTCCAATATCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: ISWWQARLSPDTHLGLSSASFAR*RPISPR
Trigger: CCTTGGGGATATTGGACGCAACCTGGCAAATGAAGC...AGAAGACAGCCCCAAGTGGGTGTCCGGGGAGAGCCTGGCCTGCCACCAGCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CCTTCACCCCTGGTGATGCCAGCTTGTCAGAACAGTCCCCATCTGGGACCTCCAGGAGTACCCAGAGACTaGGGCGCCCAGCTTCATTTG +
Preference number: 5 (lower is better)
Translates to: PSPLVMPACQNSPHLGPPGVPRD*GAQLHL
Trigger: CAAATGAAGCTGGGCGCCCAAGTCTCTGGGTACTCC...TGGAGGTCCCAGATGGGGACTGTTCTGACAAGCTGGCATCACCAGGGGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp GTCCAGGGTCTGTTGAGTCTTCAAAGCTGCAGATCGTGCTTTGCCCAGCAAGTTGCCAGCAGCCAGTGTTaGGGTAGGGGCCGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VQGLLSLQSCRSCFAQQVASSQC*GRGRLS
Trigger: GGAGAGGCGGCCCCTACCCAAACACTGGCTGCTGGC...AACTTGCTGGGCAAAGCACGATCTGCAGCTTTGAAGACTCAACAGACCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp AGGAGCAGTTTGGCTTCCGGAAGGAAGAGGAGGCAACACTCGGACCTGGTTCTTTCCCCGGACACCCACTaGGGGCTGTCTTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: RSSLASGRKRRQHSDLVLSPDTH*GLSSSL
Trigger: CAAGGAAGAAGACAGCCCCAAGTGGGTGTCCGGGGA...AAGAACCAGGTCCGAGTGTTGCCTCCTCTTCCTTCCGGAAGCCAAACTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCGGCGCCCAGCTTCATTaGCCAGGTTGCGTCCAATAT +
Preference number: 5 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGGAQLH*PGCVQY
Trigger: ATATTGGACGCAACCTGGCAAATGAAGCTGGGCGCC...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp GAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGGCCCTGGTGATGCCAGCTaGTCAGAACAGTCCCCATCT +
Preference number: 5 (lower is better)
Translates to: EEATLGPGSCTTRKHRWGPGDAS*SEQSPS
Trigger: AGATGGGGACTGTTCTGACAAGCTGGCATCACCAGG...GCCCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp CAGCCGGAGCCCTGGCTACTGCCCCATGGATTCTGGGAATGGTCTCCTGGGCCCACAAGAGGAATATATTaGGCTTCTCTCTTAAGACTC +
Preference number: 5 (lower is better)
Translates to: QPEPWLLPHGFWEWSPGPTRGIY*ASLLRL
Trigger: GAGTCTTAAGAGAGAAGCCAAATATATTCCTCTTGT...GGGCCCAGGAGACCATTCCCAGAATCCATGGGGCAGTAGCCAGGGCTCCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS-3UTR CAA 90 bp AAGAGGAGGCAACACTCGGACCTGGTTCTTGTACAACAAGAAAACATCGCTGGGACTCGGACCTGGTTCTaGTACAACAAGAAAACATCG +
Preference number: 5 (lower is better)
Translates to: KRRQHSDLVLVQQENIAGTRTWF*YNKKTS
Trigger: CGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGT...CCCAGCGATGTTTTCTTGTTGTACAAGAACCAGGTCCGAGTGTTGCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS GCA 72 bp CCCGCTCAGCGCGTGCGTGCGCCGCGGAGCCGCCACTaGACCATCCTGGTCGGGCCCCGTCGGCTCCTGCGC +
Preference number: 6 (lower is better)
Translates to: PAQRVRAPRSRH*TILVGPRRLLR
Trigger: GCGCAGGAGCCGACGGGGCCCGACCAGGATGGTGCAGTGGCGGCTCCGCGGCGCACGCACGCGCTGAGCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 72 bp CCCCGCCCGCGGCCCAAGCTGGCCGGTTTGGGCTGCTaGGCGCCGGGGCCCTTTGCAGTAGCTGCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: PRPRPKLAGLGC*APGPFAVAAQP
Trigger: CGGCTGCGCAGCTACTGCAAAGGGCCCCGGCGCTCAGCAGCCCAAACCGGCCAGCTTGGGCCGCGGGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS GCA 72 bp CCGGTCGGGGCCCGCCTTACGCTGCCCGACAGCGTCTaGACCTCATCGCCCGCGGCCGAGACTCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: PVGARLTLPDSV*TSSPAAETPAP
Trigger: CGGCGCTGGAGTCTCGGCCGCGGGCGATGAGGTGCAGACGCTGTCGGGCAGCGTAAGGCGGGCCCCGACCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CCA 72 bp AGCATGCCCACGGCACACACCAGTGGGTCGGCCCGCTaGGTCTTCAGGCGGCACCAGCGCGTGGCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: SMPTAHTSGSAR*VFRRHQRVAPA
Trigger: GGCAGGAGCCACGCGCTGGTGCCGCCTGAAGACCCAGCGGGCCGACCCACTGGTGTGTGCCGTGGGCATGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571386.1
ENST00000576635.6
CDS CCA 72 bp GATGGCAGAGCCCAGCATGCCCACGGCACACACCAGTaGGTCGGCCCGCTGGGTCTTCAGGCGGCACCAGCG +
Preference number: 6 (lower is better)
Translates to: DGRAQHAHGTHQ*VGPLGLQAAPA
Trigger: CGCTGGTGCCGCCTGAAGACCCAGCGGGCCGACCCACTGGTGTGTGCCGTGGGCATGCTGGGCTCTGCCATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571386.1
ENST00000576635.6
CDS GCA 72 bp CAACTTGGGCGCGGTGCAGGTAGAGCGGGATCCACATaGCCAGGGCCCCCGTGGCGAAGGAGACAGCCGACG +
Preference number: 6 (lower is better)
Translates to: QLGRGAGRAGST*PGPPWRRRQPT
Trigger: CGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCATGTGGATCCCGCTCTACCTGCACCGCGCCCAAGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CCA 72 bp GCAGGTAGAGCGGGATCCACATGCCCAGGGCCCCCGTaGCGAAGGAGACAGCCGACGTGGCCAGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: AGRAGSTCPGPP*RRRQPTWPGRR
Trigger: TCTCCTCCCTGGCCACGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCATGTGGATCCCGCTCTACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CCA 72 bp TCACAGATGCGGGCGGCATCGCCAGCTGGTTCACCCTaGGGGAGAGACGGGCGGGGGTCAGGGTGGTGCATC +
Preference number: 6 (lower is better)
Translates to: SQMRAASPAGSP*GRDGRGSGWCI
Trigger: GATGCACCACCCTGACCCCCGCCCGTCTCTCCCCCAGGGTGAACCAGCTGGCGATGCCGCCCGCATCTGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570979.1
CDS GCA 72 bp CCGCTGGGTCTTCAGGCGGCACCAGCGCGTGGCTCCTaGCCCCGTGACCACGCCCAGAAATCCCGTAAAGCA +
Preference number: 6 (lower is better)
Translates to: PLGLQAAPARGS*PRDHAQKSRKA
Trigger: TGCTTTACGGGATTTCTGGGCGTGGTCACGGGGGCAGGAGCCACGCGCTGGTGCCGCCTGAAGACCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571386.1
ENST00000576635.6
CDS CCA 72 bp CCTCAGACTTTCACAGATGCGGGCGGCATCGCCAGCTaGTTCACCCTGGGGGAGAGACGGGCGGGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: PQTFTDAGGIAS*FTLGERRAGVR
Trigger: CCTGACCCCCGCCCGTCTCTCCCCCAGGGTGAACCAGCTGGCGATGCCGCCCGCATCTGTGAAAGTCTGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570979.1
CDS CAA 90 bp CCCACAGGGCGGGCTGTTGCACGTCTCTGCTGTCTTCTGCACAACTaGGGCGCGGTGCAGGTAGAGCGGGATCCACATGCCCAGGGCCCC +
Preference number: 6 (lower is better)
Translates to: PTGRAVARLCCLLHN*GAVQVERDPHAQGP
Trigger: GGGGCCCTGGGCATGTGGATCCCGCTCTACCTGCACCGCGCCCAAGTTGTGCAGAAGACAGCAGAGACGTGCAACAGCCCGCCCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS GCA 72 bp TGCAGCAGGCCGGCGCCTCGGTCCTTGACCCCAAAGTaGTGCTGGATGTCCAGAAGGACGCCTGCCACGGTG +
Preference number: 6 (lower is better)
Translates to: CSRPAPRSLTPK*CWMSRRTPATV
Trigger: CACCGTGGCAGGCGTCCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGGCCTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CCA 72 bp TGCCCAGGGCCCCCGTGGCGAAGGAGACAGCCGACGTaGCCAGGGAGGAGAAGACGTAGCTGCGGTTTCGAA +
Preference number: 6 (lower is better)
Translates to: CPGPPWRRRQPT*PGRRRRSCGFE
Trigger: TTCGAAACCGCAGCTACGTCTTCTCCTCCCTGGCCACGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 72 bp GGGCCTTCATATCTCGGAGCCATGAGGTCCGGGCCTTaGGCTGGTCCCCGAGCTGGTCGGCATGACCCCTTT +
Preference number: 6 (lower is better)
Translates to: GPSYLGAMRSGP*AGPRAGRHDPF
Trigger: AAAGGGGTCATGCCGACCAGCTCGGGGACCAGCTCAAGGCCCGGACCTCATGGCTCCGAGATATGAAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 72 bp GCTGGTTCACCTGCTGCTCAGCCCTGGCGCGGTCGCTaGCGAAGAAGAGCGCAGTGGCGAGGAAGAACATGC +
Preference number: 6 (lower is better)
Translates to: AGSPAAQPWRGR*RRRAQWRGRTC
Trigger: GCATGTTCTTCCTCGCCACTGCGCTCTTCTTCGTCAGCGACCGCGCCAGGGCTGAGCAGCAGGTGAACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571668.5
ENST00000576635.6
CDS TCA 72 bp GCGGTTTCGAATCAGGGCCTTCATATCTCGGAGCCATaGGGTCCGGGCCTTGAGCTGGTCCCCGAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: AVSNQGLHISEP*GPGLELVPELV
Trigger: GACCAGCTCGGGGACCAGCTCAAGGCCCGGACCTCATGGCTCCGAGATATGAAGGCCCTGATTCGAAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS CAA 72 bp CGGGCTGTTGCACGTCTCTGCTGTCTTCTGCACAACTaGGGCGCGGTGCAGGTAGAGCGGGATCCACATGCC +
Preference number: 6 (lower is better)
Translates to: RAVARLCCLLHN*GAVQVERDPHA
Trigger: GGCATGTGGATCCCGCTCTACCTGCACCGCGCCCAAGTTGTGCAGAAGACAGCAGAGACGTGCAACAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329078.8
ENST00000571386.1
CDS CAA 90 bp AAGCTACAGATGAACACTGACTGCAGCAGGCCGGCGCCTCGGTCCTaGACCCCAAAGTGCTGCTGGATGTCCAGAAGGACGCCTGCCACG +
Preference number: 6 (lower is better)
Translates to: KLQMNTDCSRPAPRS*TPKCCWMSRRTPAT
Trigger: CGTGGCAGGCGTCCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGGCCTGCTGCAGTCAGTGTTCATCTGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 72 bp GAGCGGGGAGTCCTTAGTGCTCTGGCGGATCAGGTCTaGGATCTGCGAGGATTTGGGGGTGGATGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: ERGVLSALADQV*DLRGFGGGCQG
Trigger: GCCCTGACATCCACCCCCAAATCCTCGCAGATCTCAGACCTGATCCGCCAGAGCACTAAGGACTCCCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570641.1
ENST00000573990.1
ENST00000576635.6
CDS GCA 72 bp CATTGTCCCAATGGCACCACCTCAGACTTTCACAGATaGGGGCGGCATCGCCAGCTGGTTCACCCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: HCPNGTTSDFHR*GRHRQLVHPGG
Trigger: TCCCCCAGGGTGAACCAGCTGGCGATGCCGCCCGCATCTGTGAAAGTCTGAGGTGGTGCCATTGGGACAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570979.1
CDS CAA 72 bp ATGAACACTGACTGCAGCAGGCCGGCGCCTCGGTCCTaGACCCCAAAGTGCTGCTGGATGTCCAGAAGGACG +
Preference number: 6 (lower is better)
Translates to: MNTDCSRPAPRS*TPKCCWMSRRT
Trigger: CGTCCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGGCCTGCTGCAGTCAGTGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329078.8
CDS TCA 72 bp CGATGCTGCTCTTGGCAGCCACGAAGATCAGGCAGATaGAGATGGCAGAGCCCAGCATGCCCACGGCACACA +
Preference number: 6 (lower is better)
Translates to: RCCSWQPRRSGR*RWQSPACPRHT
Trigger: TGTGTGCCGTGGGCATGCTGGGCTCTGCCATCTTCATCTGCCTGATCTTCGTGGCTGCCAAGAGCAGCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571386.1
ENST00000576635.6
CDS GCA 72 bp CATTGTCCCAATGGCACCACCTCAGACTTTCACAGATaGGGGCGGCATCGCCAGCTGGTTCACCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: HCPNGTTSDFHR*GRHRQLVHLLL
Trigger: GAGCAGCAGGTGAACCAGCTGGCGATGCCGCCCGCATCTGTGAAAGTCTGAGGTGGTGCCATTGGGACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329078.8
ENST00000571668.5
ENST00000576635.6
CDS CCA 72 bp CTCAGGAACTCCCAGAGCGGGGAGTCCTTAGTGCTCTaGCGGATCAGGTCTGAGATCTGCGAGGATTTGGGG +
Preference number: 6 (lower is better)
Translates to: LRNSQSGESLVL*RIRSEICEDLG
Trigger: CCCCAAATCCTCGCAGATCTCAGACCTGATCCGCCAGAGCACTAAGGACTCCCCGCTCTGGGAGTTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570641.1
ENST00000573990.1
ENST00000576635.6
CDS CCA 72 bp GACGCTGTAGGACACCTCCCAGACGAGGTGGGAGTGTaGGTTCTTCATTGTCCCAATGGCACCACCTCAGAC +
Preference number: 6 (lower is better)
Translates to: DAVGHLPDEVGV*VLHCPNGTTSD
Trigger: GTCTGAGGTGGTGCCATTGGGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGTCCTACAGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329078.8
ENST00000570979.1
ENST00000571386.1
ENST00000571668.5
ENST00000573106.1
ENST00000576635.6
CDS GCA 72 bp CATTGTCCCAATGGCACCACCTCAGACTTTCACAGATaGGGGCGGCATCGCCAGCTGGTTCACCAAAGCCAA +
Preference number: 6 (lower is better)
Translates to: HCPNGTTSDFHR*GRHRQLVHQSQ
Trigger: TTGGCTTTGGTGAACCAGCTGGCGATGCCGCCCGCATCTGTGAAAGTCTGAGGTGGTGCCATTGGGACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571386.1
ENST00000573106.1
CDS CAA 72 bp ACACCTCCCAGACGAGGTGGGAGTGTGGGTTCTTCATaGTCCCAATGGCACCACCTCAGACTTTCACAGATG +
Preference number: 6 (lower is better)
Translates to: TPPRRGGSVGSS*SQWHHLRLSQM
Trigger: CATCTGTGAAAGTCTGAGGTGGTGCCATTGGGACAATGAAGAACCCACACTCCCACCTCGTCTGGGAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329078.8
ENST00000570979.1
ENST00000571386.1
ENST00000571668.5
ENST00000573106.1
ENST00000576635.6