RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPN (Homo sapiens)

Ensembl gene IDs: ENSG00000197471

Ensembl transcript IDs: ENST00000360121.4, ENST00000395389.2, ENST00000436527.5, ENST00000563039.2, ENST00000652691.1

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTGTGGTGGTGTGGGCCAGGGCCAGCCTACAGTCCATGTGCCCTaGGAAAGATCACAGGCCCGCCTGAGAGCATGGGCTGGTGGCCCC +
Preference number: 1 (lower is better)
Translates to: ECGGVGQGQPTVHVP*ERSQARLRAWAGGP
Trigger: GGGGCCACCAGCCCATGCTCTCAGGCGGGCCTGTGATCTTTCCCAGGGCACATGGACTGTAGGCTGGCCCTGGCCCACACCACCACACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp GCAATCAGAAAAGGCCACCAGATGCAGCCCAGTGGGTGCCCAGCCTaGCTGGTAGAAGCTGGTTCCATCCGAGCTCAGCTCTTCCCACCC +
Preference number: 1 (lower is better)
Translates to: AIRKGHQMQPSGCPA*LVEAGSIRAQLFPP
Trigger: GGGTGGGAAGAGCTGAGCTCGGATGGAACCAGCTTCTACCAGCCAGGCTGGGCACCCACTGGGCTGCATCTGGTGGCCTTTTCTGATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp CCCTGGGATGGAAGAGGAGACACAGACAAACTAAACCTGGAAACGTaGAGTGGGGAAGCGCCAGCCAGACCAGTCCCCGAGACCAGGGCA +
Preference number: 1 (lower is better)
Translates to: PWDGRGDTDKLNLET*SGEAPARPVPETRA
Trigger: TGCCCTGGTCTCGGGGACTGGTCTGGCTGGCGCTTCCCCACTGCACGTTTCCAGGTTTAGTTTGTCTGTGTCTCCTCTTCCATCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTaGACACAAACCACACCCACGAGTGGACACACGCAGGCACTGGGG +
Preference number: 1 (lower is better)
Translates to: VPTTTPPKHRQILSS*TQTTPTSGHTQALG
Trigger: CCCCAGTGCCTGCGTGTGTCCACTCGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp GGATGGAAGAGGAGACACAGACAAACTAAACCTGGAAACGTGCAGTaGGGAAGCGCCAGCCAGACCAGTCCCCGAGACCAGGGCAAACCC +
Preference number: 1 (lower is better)
Translates to: GWKRRHRQTKPGNVQ*GSASQTSPRDQGKP
Trigger: GGGTTTGCCCTGGTCTCGGGGACTGGTCTGGCTGGCGCTTCCCCACTGCACGTTTCCAGGTTTAGTTTGTCTGTGTCTCCTCTTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp GAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGTAGCCTaGGCTGGTCTCAAAGGCAGCACCATTGAGTTCTCCCCTCTCCAC +
Preference number: 1 (lower is better)
Translates to: EIPTALAHVCSWAVA*AGLKGSTIEFSPLH
Trigger: GTGGAGAGGGGAGAACTCAATGGTGCTGCCTTTGAGACCAGCCCAGGCTACAGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp GCGGGCTGCCCAGGTTCCACAGCCCTTGCAGCTACAGGGCAAGGGTaGTTTACAAAGTTAATCCTAGGAGGGAGTTTGCCGGGTTCTCTT +
Preference number: 1 (lower is better)
Translates to: AGCPGSTALAATGQG*FTKLILGGSLPGSL
Trigger: AAGAGAACCCGGCAAACTCCCTCCTAGGATTAACTTTGTAAAGCACCCTTGCCCTGTAGCTGCAAGGGCTGTGGAACCTGGGCAGCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp CCCAGAGCTAAAGGTGGTTGCGGGCTGCCCAGGTTCCACAGCCCTTaGAGCTACAGGGCAAGGGTGCTTTACAAAGTTAATCCTAGGAGG +
Preference number: 1 (lower is better)
Translates to: PRAKGGCGLPRFHSP*SYRARVLYKVNPRR
Trigger: CCTCCTAGGATTAACTTTGTAAAGCACCCTTGCCCTGTAGCTGCAAGGGCTGTGGAACCTGGGCAGCCCGCAACCACCTTTAGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp TTTCCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTaGTCCTGGGCTGTAGCCTGGGCTGGTCTCAAAGGCAGCACCATT +
Preference number: 1 (lower is better)
Translates to: FPLCPREIPTALAHV*SWAVAWAGLKGSTI
Trigger: AATGGTGCTGCCTTTGAGACCAGCCCAGGCTACAGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp GCATCGCCAAATCCTCAGCTCTTGCACACAAACCACACCCACGAGTaGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCA +
Preference number: 1 (lower is better)
Translates to: ASPNPQLLHTNHTHE*THAGTGVSENYTQP
Trigger: TGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACTCGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp ATACACACACAGGCACATGCACGCACGCACATGCACGCACGCACATaGACACGTACACACATATGTGCACACACGCATGGCTTGGTAGGC +
Preference number: 1 (lower is better)
Translates to: IHTQAHARTHMHART*TRTHICAHTHGLVG
Trigger: GCCTACCAAGCCATGCGTGTGTGCACATATGTGTGTACGTGTGCATGTGCGTGCGTGCATGTGCGTGCGTGCATGTGCCTGTGTGTGTAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp CTCACTGGTTCCTCTTGGAGGATGGAAGGGGCTCAGCCCCTGGGATaGAAGAGGAGACACAGACAAACTAAACCTGGAAACGTGCAGTGG +
Preference number: 1 (lower is better)
Translates to: LTGSSWRMEGAQPLG*KRRHRQTKPGNVQW
Trigger: CCACTGCACGTTTCCAGGTTTAGTTTGTCTGTGTCTCCTCTTCCATCCCAGGGGCTGAGCCCCTTCCATCCTCCAAGAGGAACCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp TTCCTCAAAGTCTCCCTTGCCACAGTACACATGCATGGGAGAACATaGATGCACACACACATGCGCGCACACACACACATGCGCACACAC +
Preference number: 1 (lower is better)
Translates to: FLKVSLATVHMHGRT*MHTHMRAHTHMRTH
Trigger: GTGTGTGCGCATGTGTGTGTGTGCGCGCATGTGTGTGTGCATGCATGTTCTCCCATGCATGTGTACTGTGGCAAGGGAGACTTTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp GCCGGGTTCTCTTGTCCTTCTTCCCAGACTCTGGTCAACCCAGGGTaGGTTCTGGGGGAAAAGGAGAATTGTCAAAGAAATCACAGGGCA +
Preference number: 1 (lower is better)
Translates to: AGFSCPSSQTLVNPG*VLGEKENCQRNHRA
Trigger: TGCCCTGTGATTTCTTTGACAATTCTCCTTTTCCCCCAGAACCCACCCTGGGTTGACCAGAGTCTGGGAAGAAGGACAAGAGAACCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp CTAGGAGGGAGTTTGCCGGGTTCTCTTGTCCTTCTTCCCAGACTCTaGTCAACCCAGGGTGGGTTCTGGGGGAAAAGGAGAATTGTCAAA +
Preference number: 1 (lower is better)
Translates to: LGGSLPGSLVLLPRL*STQGGFWGKRRIVK
Trigger: TTTGACAATTCTCCTTTTCCCCCAGAACCCACCCTGGGTTGACCAGAGTCTGGGAAGAAGGACAAGAGAACCCGGCAAACTCCCTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp ACGCACGCACATGCACGCACGCACATGCACACGTACACACATATGTaGACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAAT +
Preference number: 1 (lower is better)
Translates to: THAHARTHMHTYTHM*THAWLGRLHLRVMN
Trigger: ATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGTGCACATATGTGTGTACGTGTGCATGTGCGTGCGTGCATGTGCGTGCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 90 bp TCAAAGTCTCCCTTGCCACAGTACACATGCATGGGAGAACATGCATaGACACACACATGCGCGCACACACACACATGCGCACACACATGT +
Preference number: 1 (lower is better)
Translates to: SKSPLPQYTCMGEHA*THTCAHTHTCAHTC
Trigger: ACATGTGTGTGCGCATGTGTGTGTGTGCGCGCATGTGTGTGTGCATGCATGTTCTCCCATGCATGTGTACTGTGGCAAGGGAGACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 90 bp GCACGCACGCACATGCACACGTACACACATATGTGCACACACGCATaGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCC +
Preference number: 1 (lower is better)
Translates to: ARTHMHTYTHMCTHA*LGRLHLRVMNAPFS
Trigger: GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGTGCACATATGTGTGTACGTGTGCATGTGCGTGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR TCA 90 bp GTCTGCTCTCAGCCACCGCAAGCTCTAACTCAACAACTTCCTCTTTaGAAATTTCCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCC +
Preference number: 1 (lower is better)
Translates to: VCSQPPQALTQQLPL*KFPLCPREIPTALA
Trigger: GGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGGAAATTTTCAAAGAGGAAGTTGTTGAGTTAGAGCTTGCGGTGGCTGAGAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGTGCTGGAGGCTGGCTaGGATTCCGGCCTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNVLEAG*DSGLQP
Trigger: AGGCTGGAGGCCGGAATCTCAGCCAGCCTCCAGCAC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGTGCTGGAGGCTGGCTaGGATTCCGGCCTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPVLEAG*DSGLQP
Trigger: AGGCTGGAGGCCGGAATCTCAGCCAGCCTCCAGCAC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR CCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCTGGGGAGAGTGTGGTaGTGTGGGCCAGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: QPETRRRNREASGCLCPWLGRVW*CGPGPA
Trigger: GGCTGGCCCTGGCCCACACCACCACACTCTCCCCAG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGAAGGTGCTGGAGGCTaGCTGAGATTCCGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNEGAGG*LRFRPP
Trigger: TGGAGGCCGGAATCTCAGCCAGCCTCCAGCACCTTC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGAGAGCATGGGCTGGTaGCCCCACCCAGCCATGCTC +
Preference number: 2 (lower is better)
Translates to: PLCPREIPTALAHVCSWAESMGW*PHPAML
Trigger: GAGCATGGCTGGGTGGGGCCACCAGCCCATGCTCTC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGTCGGAGGAGAAACCGTaGGGCCTCTGGCTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCESEEKP*GLWLPL
Trigger: CAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGA...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATTCAGAGTGAAGAGGTaGGTGAGGAGGCAAGGCGCG +
Preference number: 2 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPFRVKR*VRRQGA
Trigger: CGCGCCTTGCCTCCTCACCCACCTCTTCACTCTGAA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCCTGGGGAGAGTGTGGTaGTGTGGGCCAGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLLGRVW*CGPGPA
Trigger: GGCTGGCCCTGGCCCACACCACCACACTCTCCCCAG...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGCCTGGAAACGTGCAGTaGGGAAGCGCCAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEPGNVQ*GSASQT
Trigger: GGTCTGGCTGGCGCTTCCCCACTGCACGTTTCCAGG...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGGCCCATGTGTGCTCCTaGGCTGTAGCCTGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEAHVCS*AVAWAG
Trigger: ACCAGCCCAGGCTACAGCCCAGGAGCACACATGGGC...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATACTGAGATCGTGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNTEIVH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCACGATCTCAGT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR GCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGGAAAAGGCCACCAGATaGAGCCCAGTGGGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEEKATR*SPVGAQ
Trigger: CTGGGCACCCACTGGGCTGCATCTGGTGGCCTTTTC...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGGCCTCTGTCCATGGCTaGGGAGAGTGTGGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEASVHG*GECGGV
Trigger: CACACCACCACACTCTCCCCAGCCATGGACAGAGGC...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGAGGTTGCAGTGAACTaGGATCGTGCATTGCACTCC +
Preference number: 2 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPEVAVN*DRALHS
Trigger: GGAGTGCAATGCACGATCTCAGTTCACTGCAACCTC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCTGAGGTCAGGAGTTTaGGACCAGCCTAGCCAACAT +
Preference number: 2 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNLRSGV*DQPSQH
Trigger: ATGTTGGCTAGGCTGGTCTCAAACTCCTGACCTCAG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGACTGAGATCGTGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: QPETRRRNREASGCLCPWTEIVH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCACGATCTCAGT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATAGTGAACTGAGATCGTaGATTGCACTCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNSELRS*IALQPG
Trigger: CCCAGGCTGGAGTGCAATGCACGATCTCAGTTCACT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR GCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTAGAGCTAAAGGTGGTTaGGGGCTGCCCAGGTTCCAC +
Preference number: 2 (lower is better)
Translates to: PLCPREIPTALAHVCSWARAKGG*GLPRFH
Trigger: GTGGAACCTGGGCAGCCCGCAACCACCTTTAGCTCT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGCTGCCTCTGTCCATaGCTGGGGAGAGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLGCLCP*LGRVWW
Trigger: CCACCACACTCTCCCCAGCCATGGACAGAGGCAGCC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGGCTGCCTCTGTCCATaGCTGGGGAGAGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPGCLCP*LGRVWW
Trigger: CCACCACACTCTCCCCAGCCATGGACAGAGGCAGCC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CAA 90 bp TGTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTaGCACACAAACCACACCCACGAGTGGACACACGCAGGCACTGGG +
Preference number: 2 (lower is better)
Translates to: CTHNYPSQASPNPQL*HTNHTHEWTHAGTG
Trigger: CCCAGTGCCTGCGTGTGTCCACTCGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGGAGGTTGCAGTGAACTaGGATCGTGCATTGCACTCC +
Preference number: 2 (lower is better)
Translates to: QPETRRRNREASGCLCPWEVAVN*DRALHS
Trigger: GGAGTGCAATGCACGATCTCAGTTCACTGCAACCTC...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTTAGGAGGCAGAGGTTaGAGTGAACTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNLGGRG*SELRSC
Trigger: GCACGATCTCAGTTCACTGCAACCTCTGCCTCCTAA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGCGCTAGTTGTGGGTaGTGGGTGAGGATGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGASCG*WVRMAA
Trigger: TGCTGCCATCCTCACCCAGCACCCACAACTAGCGCC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR GCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAACAGACGTTGAGAGGTaGCAGCCCTGCCCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTTDVER*QPCPAQ
Trigger: CTGGGCAGGGCAGGGCTGGCACCTCTCAACGTCTGT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTAAGGTGGTTGCGGGCTaGCCAGGTTCCACAGCCCTT +
Preference number: 2 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPKVVAG*PGSTAL
Trigger: AAGGGCTGTGGAACCTGGGCAGCCCGCAACCACCTT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGAGCCTACAGTCCATGTaGCCTGGGAAAGATCACAGG +
Preference number: 2 (lower is better)
Translates to: QPETRRRNREASGCLCPWSLQSM*PGKDHR
Trigger: CCTGTGATCTTTCCCAGGGCACATGGACTGTAGGCT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGTCGGGAAATACCAACTaGCCTGGCCCATGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCESGNTN*PGPCVL
Trigger: GAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGA...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGAAGGTGCTGGAGGCTaGCTGAGATTCCGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: RRVYSFSPQTLRGASPALEGAGG*LRFRPP
Trigger: TGGAGGCCGGAATCTCAGCCAGCCTCCAGCACCTTC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTCTTCTTCCCAGACTCTaGTCAACCCAGGGTGGGTTC +
Preference number: 2 (lower is better)
Translates to: PLCPREIPTALAHVCSWALLPRL*STQGGF
Trigger: GAACCCACCCTGGGTTGACCAGAGTCTGGGAAGAAG...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAGAGAGTGTGGTGGTGTaGGCCAGGGCCAGCCTACAG +
Preference number: 2 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQESVVV*ARASLQ
Trigger: CTGTAGGCTGGCCCTGGCCCACACCACCACACTCTC...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGAAAAGGAGATTCGGGTaGGGATCAGGGTGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: RRVYSFSPQTLRGASPALKRRFG*GSGCRV
Trigger: CACCCGGCACCCTGATCCTCACCCGAATCTCCTTTT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR TCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTCAGTCCACAGACGTTaGGAGGTGCCAGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPSVHRR*EVPALP
Trigger: GGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGA...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTCCATCAGAGCAAAGATaGCACGCACGTTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PLCPREIPTALAHVCSWAPSEQR*HARSQQ
Trigger: CTGCTGAGAACGTGCGTGTCATCTTTGCTCTGATGG...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGAAGGTGCTGGAGGCTaGCTGAGATTCCGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTEGAGG*LRFRPP
Trigger: TGGAGGCCGGAATCTCAGCCAGCCTCCAGCACCTTC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCTTCAGAGTGAAGAGGTaGGTGAGGAGGCAAGGCGCG +
Preference number: 2 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLFRVKR*VRRQGA
Trigger: CGCGCCTTGCCTCCTCACCCACCTCTTCACTCTGAA...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCCTGGTCAACCCAGGGTaGGTTCTGGGGGAAAAGGAG +
Preference number: 2 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLLVNPG*VLGEKE
Trigger: CTCCTTTTCCCCCAGAACCCACCCTGGGTTGACCAG...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTACAGTCCATGTGCCCTaGGAAAGATCACAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPTVHVP*ERSQAR
Trigger: GCGGGCCTGTGATCTTTCCCAGGGCACATGGACTGT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCACAGTCCATGTGCCCTaGGAAAGATCACAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLTVHVP*ERSQAR
Trigger: GCGGGCCTGTGATCTTTCCCAGGGCACATGGACTGT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGTTGTGGGTGCTGGGTaGGGATGGCAGCAGGAAATC +
Preference number: 2 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTVVGAG*GWQQEI
Trigger: GATTTCCTGCTGCCATCCTCACCCAGCACCCACAAC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACAGGCGCTAGTTGTGGGTaGTGGGTGAGGATGGCAGCA +
Preference number: 2 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTGASCG*WVRMAA
Trigger: TGCTGCCATCCTCACCCAGCACCCACAACTAGCGCC...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGGCCCTGGCCCATGTGTaGTCCTGGGCTGTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: QSWLRKQPYLSKEREVELALAHV*SWAVAW
Trigger: CCAGGCTACAGCCCAGGAGCACACATGGGCCAGGGC...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAGCTAGTTGTGGGTGCTaGGTGAGGATGGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQASCGC*VRMAAG
Trigger: TCCTGCTGCCATCCTCACCCAGCACCCACAACTAGC...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTTCTTCCCAGACTCTaGTCAACCCAGGGTGGGTTC +
Preference number: 2 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPLLPRL*STQGGF
Trigger: GAACCCACCCTGGGTTGACCAGAGTCTGGGAAGAAG...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTCCTGGGCTGTAGCCTaGGCTGGTCTCAAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPSWAVA*AGLKGS
Trigger: GCTGCCTTTGAGACCAGCCCAGGCTACAGCCCAGGA...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGAGGCAGAGGTTGCAGTaGACTGAGATCGTGCATTGC +
Preference number: 2 (lower is better)
Translates to: RRVYSFSPQTLRGASPALRQRLQ*TEIVHC
Trigger: GCAATGCACGATCTCAGTTCACTGCAACCTCTGCCT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR GCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCACAGACGTTGAGAGGTaGCAGCCCTGCCCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSTDVER*QPCPAQ
Trigger: CTGGGCAGGGCAGGGCTGGCACCTCTCAACGTCTGT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCATGCCGGGTGGAAACATaGGAGCGAGGGGGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: CRNGDFKEGITMAELKNSCRVET*ERGGSG
Trigger: CCCACTGCCCCCTCGCTCCCATGTTTCCACCCGGCA...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCACCTGAGAGCATGGGCTaGTGGCCCCACCCAGCCATG +
Preference number: 2 (lower is better)
Translates to: CRNGDFKEGITMAELKNSPESMG*WPHPAM
Trigger: CATGGCTGGGTGGGGCCACCAGCCCATGCTCTCAGG...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGAAGGGATTTTGGACATaGCCTCTGTCATTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEKGFWT*PLSFCS
Trigger: GCTGCAGAATGACAGAGGCCATGTCCAAAATCCCTT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGGGGGTTTCATCATATTaGCCAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEGVSSY*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAATATGATGAAACCCC...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCGTGCTGGAGGCTGGCTaGGATTCCGGCCTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCVLEAG*DSGLQP
Trigger: AGGCTGGAGGCCGGAATCTCAGCCAGCCTCCAGCAC...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
3UTR-3UTR TCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGATTCTGCAGCTGCAGTaGGTCCAAATAGCAATCAGA +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEILQLQ*VQIAIR
Trigger: TCTGATTGCTATTTGGACTCACTGCAGCTGCAGAAT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGATTCGCCCAGGACCTaGCTAAAACCAGTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPDSPRT*LKPVLA
Trigger: AGCCAGGACTGGTTTTAGTCAGGTCCTGGGCGAATC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTTAGGAGGCAGAGGTTaGAGTGAACTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: RRVYSFSPQTLRGASPALLGGRG*SELRSC
Trigger: GCACGATCTCAGTTCACTGCAACCTCTGCCTCCTAA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGGCTACAGGGCAAGGGTaGTTTACAAAGTTAATCCTA +
Preference number: 2 (lower is better)
Translates to: QPETRRRNREASGCLCPWATGQG*FTKLIL
Trigger: TAGGATTAACTTTGTAAAGCACCCTTGCCCTGTAGC...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGATAAGTTTGGCCGATaGAGACTCAGCAGCCGTTTC +
Preference number: 2 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPDKFGR*RLSSRF
Trigger: GAAACGGCTGCTGAGTCTCCATCGGCCAAACTTATC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTAAATACCAACTGCCCTaGCCCATGTGTGCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPKYQLP*PMCAPG
Trigger: CCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTT...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGAGTGGGTGCCCAGCCTaGCTGGTAGAAGCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: QSWLRKQPYLSKEREVELSGCPA*LVEAGS
Trigger: GGAACCAGCTTCTACCAGCCAGGCTGGGCACCCACT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CAA 90 bp GCTACAGGGCAAGGGTGCTTTACAAAGTTAATCCTAGGAGGGAGTTaGCCGGGTTCTCTTGTCCTTCTTCCCAGACTCTGGTCAACCCAG +
Preference number: 2 (lower is better)
Translates to: ATGQGCFTKLILGGS*PGSLVLLPRLWSTQ
Trigger: CTGGGTTGACCAGAGTCTGGGAAGAAGGACAAGAGAACCCGGCAAACTCCCTCCTAGGATTAACTTTGTAAAGCACCCTTGCCCTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACACTGAGGTCAGGAGTTTaGGACCAGCCTAGCCAACAT +
Preference number: 2 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTLRSGV*DQPSQH
Trigger: ATGTTGGCTAGGCTGGTCTCAAACTCCTGACCTCAG...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCTGAGGTCAGGAGTTTaGGACCAGCCTAGCCAACAT +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLRSGV*DQPSQH
Trigger: ATGTTGGCTAGGCTGGTCTCAAACTCCTGACCTCAG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTAGTGAACTGAGATCGTaGATTGCACTCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPSELRS*IALQPG
Trigger: CCCAGGCTGGAGTGCAATGCACGATCTCAGTTCACT...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGCCTGAGAGTTATGAATaGACCATTTTCCTTGGTGCA +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEPESYE*TIFLGA
Trigger: TGCACCAAGGAAAATGGTGCATTCATAACTCTCAGG...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCAATGCGAGCCCTTCTaGTCAGCCACTGGAATCTCT +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPQCEPF*SATGIS
Trigger: AGAGATTCCAGTGGCTGAGCAGAAGGGCTCGCATTG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGATAAATAGGGGTGGATaGGGAGGGTTTATTCATTCA +
Preference number: 2 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEINRGG*GGFIHS
Trigger: TGAATGAATAAACCCTCCTCATCCACCCCTATTTAT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGACTGAGATCGTGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: QSWLRKQPYLSKEREVELTEIVH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCACGATCTCAGT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTAGGAGGCAGAGGTTaGAGTGAACTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLGGRG*SELRSC
Trigger: GCACGATCTCAGTTCACTGCAACCTCTGCCTCCTAA...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCAAATCCTCAGCTCTTaGACACAAACCACACCCACG +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPQILSS*TQTTPT
Trigger: CGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCGAAGGTGCTGGAGGCTaGCTGAGATTCCGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCEGAGG*LRFRPP
Trigger: TGGAGGCCGGAATCTCAGCCAGCCTCCAGCACCTTC...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
3UTR-3UTR CCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCCTGGCTGGTAGAAGCTaGTTCCATCCGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSLAGRS*FHPSSA
Trigger: AGCTGAGCTCGGATGGAACCAGCTTCTACCAGCCAG...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCTGGCTGGTAGAAGCTaGTTCCATCCGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: QSWLRKQPYLSKEREVELLAGRS*FHPSSA
Trigger: AGCTGAGCTCGGATGGAACCAGCTTCTACCAGCCAG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGTGCTGGAGGCTGGCTaGGATTCCGGCCTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVVLEAG*DSGLQP
Trigger: AGGCTGGAGGCCGGAATCTCAGCCAGCCTCCAGCAC...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
3UTR-3UTR TCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGAGGCAGAGGTTGCAGTaGACTGAGATCGTGCATTGC +
Preference number: 2 (lower is better)
Translates to: QSWLRKQPYLSKEREVELRQRLQ*TEIVHC
Trigger: GCAATGCACGATCTCAGTTCACTGCAACCTCTGCCT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGCTACAGGGCAAGGGTaGTTTACAAAGTTAATCCTA +
Preference number: 2 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPATGQG*FTKLIL
Trigger: TAGGATTAACTTTGTAAAGCACCCTTGCCCTGTAGC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCTTCTGCTCAGCCACTaGAATCTCTTCCTCAAAGTC +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLLLSH*NLFLKV
Trigger: GACTTTGAGGAAGAGATTCCAGTGGCTGAGCAGAAG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTATAAACTCACCACTTTaGAGATCAGCATGGAAAACA +
Preference number: 2 (lower is better)
Translates to: PLCPREIPTALAHVCSWAINSPL*RSAWKT
Trigger: TGTTTTCCATGCTGATCTCCAAAGTGGTGAGTTTAT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
3UTR CAA 90 bp TGTCTGCTCTCAGCCACCGCAAGCTCTAACTCAACAACTTCCTCTTaGAAAATTTCCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: CLLSATASSNSTTSS*KISSLSSGNTNCPG
Trigger: GCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGGAAATTTTCAAAGAGGAAGTTGTTGAGTTAGAGCTTGCGGTGGCTGAGAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGAGGTTGCAGTGAACTaGGATCGTGCATTGCACTCC +
Preference number: 2 (lower is better)
Translates to: CRNGDFKEGITMAELKNSEVAVN*DRALHS
Trigger: GGAGTGCAATGCACGATCTCAGTTCACTGCAACCTC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAAGCCTACAGTCCATGTaGCCTGGGAAAGATCACAGG +
Preference number: 2 (lower is better)
Translates to: CRNGDFKEGITMAELKNSSLQSM*PGKDHR
Trigger: CCTGTGATCTTTCCCAGGGCACATGGACTGTAGGCT...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCAGCCTCCTAAGTAGCTaGGATTACAGGAGCACACCA +
Preference number: 2 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSSLLSS*DYRSTP
Trigger: TGGTGTGCTCCTGTAATCCCAGCTACTTAGGAGGCT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CAA 90 bp TGGGGGAAAAGGAGAATTGTCAAAGAAATCACAGGGCAGATAAGTTaGGCCGATGGAGACTCAGCAGCCGTTTCCAGGAACAAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: WGKRRIVKEITGQIS*ADGDSAAVSRNKKE
Trigger: CTCTTTCTTGTTCCTGGAAACGGCTGCTGAGTCTCCATCGGCCAAACTTATCTGCCCTGTGATTTCTTTGACAATTCTCCTTTTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAATAAATAGGGGTGGATaGGGAGGGTTTATTCATTCA +
Preference number: 2 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQINRGG*GGFIHS
Trigger: TGAATGAATAAACCCTCCTCATCCACCCCTATTTAT...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGGCGACGTTCGTTCGGTaGCAGTATTTTCTAAACCTG +
Preference number: 2 (lower is better)
Translates to: QSWLRKQPYLSKEREVELATFVR*QYFLNL
Trigger: CAGGTTTAGAAAATACTGTCACCGAACGAACGTCGC...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCACAAATCCTCAGCTCTTaGACACAAACCACACCCACG +
Preference number: 2 (lower is better)
Translates to: CRNGDFKEGITMAELKNSQILSS*TQTTPT
Trigger: CGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTG...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCTTTGGAGATCAGCATaGAAAACATTTGCGATGGGT +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLWRSA*KTFAMG
Trigger: ACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
3UTR-3UTR GCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCAGGAGCACACCACCATaGCTGGCTAACTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSRSTPP*LANFCI
Trigger: AATACAAAAGTTAGCCAGGCATGGTGGTGTGCTCCT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGAGGGATTACCATGGCTaGGCTGAAGAACTCATATTT +
Preference number: 2 (lower is better)
Translates to: QSWLRKQPYLSKEREVELRDYHG*AEELIF
Trigger: AAATATGAGTTCTTCAGCTCAGCCATGGTAATCCCT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCACCATTTTCCTTGGTaGATTCATAACACTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPHHFPW*IHNTVC
Trigger: ACAAACAGTGTTATGAATGCACCAAGGAAAATGGTG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR TCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTAGGCAGAGGTTGCAGTaGACTGAGATCGTGCATTGC +
Preference number: 2 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVRQRLQ*TEIVHC
Trigger: GCAATGCACGATCTCAGTTCACTGCAACCTCTGCCT...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
3UTR CAA 90 bp GACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCATATTaGGGTCACACATACGATCTTTCCATGAAGCCTGGCTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: DFKEGITMAELKNSY*GHTYDLSMKPGFLF
Trigger: AAAAAGAAAGCCAGGCTTCATGGAAAGATCGTATGTGTGACCCAAATATGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR GCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTTCCAAGACGGAGTCTTaGTTCTGTCTCAAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFSKTES*FCLKRK
Trigger: TTTTCTTTTGAGACAGAAGCAAGACTCCGTCTTGGA...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563039.2
3UTR CAA 90 bp TCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTaGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATTACAA +
Preference number: 2 (lower is better)
Translates to: SPLWRSAWKTFAMGP*FPYKCIYGWEFLLQ
Trigger: TTGTAATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
3UTR CCA 72 bp AAAGGCCACCAGATGCAGCCCAGTGGGTGCCCAGCCTaGCTGGTAGAAGCTGGTTCCATCCGAGCTCAGCTC +
Preference number: 3 (lower is better)
Translates to: KGHQMQPSGCPA*LVEAGSIRAQL
Trigger: GAGCTGAGCTCGGATGGAACCAGCTTCTACCAGCCAGGCTGGGCACCCACTGGGCTGCATCTGGTGGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGTTCAGTCCACAGACGTaGAGAGGTGCCAGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: QPETRRRNREASGCLCPWFSPQT*RGASPA
Trigger: GGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAA...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR TCA 72 bp GAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTaGGGCCTCTGGCTGCCTCTGTCCATGGCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: ELHPARNSEEKP*GLWLPLSMAGE
Trigger: CTCCCCAGCCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp CCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTaGCTCTGTCCATGGCTGGGGAGAGTGTGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: PETRRRNREASG*LCPWLGRVWWC
Trigger: ACACCACCACACTCTCCCCAGCCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp TGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTaGTCCTGGGCTGTAGCCTGGGCTGGTCTCAAAGGC +
Preference number: 3 (lower is better)
Translates to: CPREIPTALAHV*SWAVAWAGLKG
Trigger: GCCTTTGAGACCAGCCCAGGCTACAGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTTCAAAGGCAGCACCATaGAGTTCTCCCCTCTCCACC +
Preference number: 3 (lower is better)
Translates to: PLCPREIPTALAHVCSWASKAAP*SSPLST
Trigger: GGTGGAGAGGGGAGAACTCAATGGTGCTGCCTTTGA...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp GAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTaGCAGCCCTGCCCTGCCCAGGCGCTAGTTGTGGGT +
Preference number: 3 (lower is better)
Translates to: EGLFIQSTDVER*QPCPAQALVVG
Trigger: ACCCACAACTAGCGCCTGGGCAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
3UTR CCA 72 bp AGGAGACACAGACAAACTAAACCTGGAAACGTGCAGTaGGGAAGCGCCAGCCAGACCAGTCCCCGAGACCAG +
Preference number: 3 (lower is better)
Translates to: RRHRQTKPGNVQ*GSASQTSPRDQ
Trigger: CTGGTCTCGGGGACTGGTCTGGCTGGCGCTTCCCCACTGCACGTTTCCAGGTTTAGTTTGTCTGTGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 72 bp CTCCTTCACTCACTCTCACTGGTTCCTCTTGGAGGATaGAAGGGGCTCAGCCCCTGGGATGGAAGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: LLHSLSLVPLGG*KGLSPWDGRGD
Trigger: GTCTCCTCTTCCATCCCAGGGGCTGAGCCCCTTCCATCCTCCAAGAGGAACCAGTGAGAGTGAGTGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTACAGGGCAGATAAGTTaGGCCGATGGAGACTCAGCA +
Preference number: 3 (lower is better)
Translates to: PLCPREIPTALAHVCSWATGQIS*ADGDSA
Trigger: TGCTGAGTCTCCATCGGCCAAACTTATCTGCCCTGT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTATCCTAGGAGGGAGTTaGCCGGGTTCTCTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: PLCPREIPTALAHVCSWAILGGS*PGSLVL
Trigger: AAGGACAAGAGAACCCGGCAAACTCCCTCCTAGGAT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp ACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTaGACACAAACCACACCCACGAGTGGACACACGCAG +
Preference number: 3 (lower is better)
Translates to: TTPPKHRQILSS*TQTTPTSGHTQ
Trigger: CTGCGTGTGTCCACTCGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp CCTTCCAACCTTTCGCCAGGGCAATGCGAGCCCTTCTaGTCAGCCACTGGAATCTCTTCCTCAAAGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PSNLSPGQCEPF*SATGISSSKSP
Trigger: GGGAGACTTTGAGGAAGAGATTCCAGTGGCTGAGCAGAAGGGCTCGCATTGCCCTGGCGAAAGGTTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp CCAGGTTCCACAGCCCTTGCAGCTACAGGGCAAGGGTaGTTTACAAAGTTAATCCTAGGAGGGAGTTTGCCG +
Preference number: 3 (lower is better)
Translates to: PGSTALAATGQG*FTKLILGGSLP
Trigger: CGGCAAACTCCCTCCTAGGATTAACTTTGTAAAGCACCCTTGCCCTGTAGCTGCAAGGGCTGTGGAACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp GTCTCCCTTGCCACAGTACACATGCATGGGAGAACATaGATGCACACACACATGCGCGCACACACACACATG +
Preference number: 3 (lower is better)
Translates to: VSLATVHMHGRT*MHTHMRAHTHM
Trigger: CATGTGTGTGTGTGCGCGCATGTGTGTGTGCATGCATGTTCTCCCATGCATGTGTACTGTGGCAAGGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGTCCCCCATGCCCAGGTaGACCCTCTTCAGTCTCTGC +
Preference number: 3 (lower is better)
Translates to: QSWLRKQPYLSKEREVELSPMPR*TLFSLC
Trigger: GCAGAGACTGAAGAGGGTCAACCTGGGCATGGGGGA...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACAACAGGGCAGATAAGTTaGGCCGATGGAGACTCAGCA +
Preference number: 3 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTTGQIS*ADGDSA
Trigger: TGCTGAGTCTCCATCGGCCAAACTTATCTGCCCTGT...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTATCCTAGGAGGGAGTTaGCCGGGTTCTCTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPILGGS*PGSLVL
Trigger: AAGGACAAGAGAACCCGGCAAACTCCCTCCTAGGAT...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR TCA 72 bp AGGGAGGTGGAGCTGAGGACAGCGACGTTCGTTCGGTaGCAGTATTTTCTAAACCTGATATGGGGGCTCTTA +
Preference number: 3 (lower is better)
Translates to: REVELRTATFVR*QYFLNLIWGLL
Trigger: TAAGAGCCCCCATATCAGGTTTAGAAAATACTGTCACCGAACGAACGTCGCTGTCCTCAGCTCCACCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR GCA 72 bp CCGCCTCAGCCTCCTATAGTGCCACCGCATAGCCACTaGACCCAACTATTTTCTTACTGTTCCTTGCTCTAT +
Preference number: 3 (lower is better)
Translates to: PPQPPIVPPHSH*TQLFSYCSLLY
Trigger: ATAGAGCAAGGAACAGTAAGAAAATAGTTGGGTGCAGTGGCTATGCGGTGGCACTATAGGAGGCTGAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR-3UTR CAA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCATTTGCGATGGGTCCTTaGTTTCCCTATAAGTGCATA +
Preference number: 3 (lower is better)
Translates to: CRNGDFKEGITMAELKNSFAMGP*FPYKCI
Trigger: TATGCACTTATAGGGAAACAAAGGACCCATCGCAAA...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652691.1
3UTR TCA 72 bp CAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTaGGCTGAAGAACTCATATTTGGGTCACACATACGA +
Preference number: 3 (lower is better)
Translates to: QKWRLQGRDYHG*AEELIFGSHIR
Trigger: TCGTATGTGTGACCCAAATATGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
3UTR CCA 72 bp CACCACTTTGGAGATCAGCATGGAAAACATTTGCGATaGGTCCTTTGTTTCCCTATAAGTGCATATATGGTT +
Preference number: 3 (lower is better)
Translates to: HHFGDQHGKHLR*VLCFPISAYMV
Trigger: AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
3UTR CCA 72 bp AAATCACACATAAACTCACCACTTTGGAGATCAGCATaGAAAACATTTGCGATGGGTCCTTTGTTTCCCTAT +
Preference number: 3 (lower is better)
Translates to: KSHINSPLWRSA*KTFAMGPLFPY
Trigger: ATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTTTATGTGTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
3UTR-3UTR CAA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATTTCCAAGACGGAGTCTaGCTTCTGTCTCAAAAGAAA +
Preference number: 3 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYFQDGV*LLSQKK
Trigger: TTTCTTTTGAGACAGAAGCAAGACTCCGTCTTGGAA...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563039.2
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGTCCGCCGCTTCTaGCGCCGGCGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNPVRRF*RRRHSR
Trigger: CCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGCCAGTCCGCCGCTTCTaGCGCCGGCGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEPVRRF*RRRHSR
Trigger: CCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGG...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGTAGGGCTGAGGTCTaGTCCCCAGTGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGRAEV*SPVLSA
Trigger: GGCCGACAGCACTGGGGACCAGACCTCAGCCCTACC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGGCTCATCAGGAGCTaGGGCGTCCACAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGLIRS*GVHSPI
Trigger: GATGGGGCTGTGGACGCCCCAGCTCCTGATGAGCCC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGGGCTCATCAGGAGCTaGGGCGTCCACAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPGLIRS*GVHSPI
Trigger: GATGGGGCTGTGGACGCCCCAGCTCCTGATGAGCCC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATCAGTCCACAGACGTTaGGAGGTGCCAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPSVHRR*EVPALP
Trigger: GGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATCGGAGGAGAAACCGTaGGGCCTCTGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPSEEKP*GLWLPL
Trigger: CAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCCAGTCCGCCGCTTCTaGCGCCGGCGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALPVRRF*RRRHSR
Trigger: CCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCACCACCCCGTTACGCTTaGCGCCTCTGCTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPPPRYA*RLCSAR
Trigger: TCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGG...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATACAGACGTTGAGAGGTaGCAGCCCTGCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNTDVER*QPCPAQ
Trigger: CTGGGCAGGGCAGGGCTGGCACCTCTCAACGTCTGT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGGCCCCACCCAGCCATaGTCCAGGCTGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPGPTQP*SRLAWG
Trigger: CCCCCAGGCCAGCCTGGAGCATGGCTGGGTGGGGCC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAATCGCCAGGGAGCCCTaGCGAGACTTCCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPIAREP*RDFRLP
Trigger: TGGCAGACGGAAGTCTCGCCAGGGCTCCCTGGCGAT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGGAGAGCATGGGCTGGTaGCCCCACCCAGCCATGCTC +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWESMGW*PHPAML
Trigger: GAGCATGGCTGGGTGGGGCCACCAGCCCATGCTCTC...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGAGAGTGTGGTGGTGTaGGCCAGGGCCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNESVVV*ARASLQ
Trigger: CTGTAGGCTGGCCCTGGCCCACACCACCACACTCTC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGTGCTGGAGGCTGGCTaGGATTCCGGCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAVLEAG*DSGLQP
Trigger: AGGCTGGAGGCCGGAATCTCAGCCAGCCTCCAGCAC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGGTGGGTGTCTGCACTaGTGTTGTGCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPGGCLH*CCAPQS
Trigger: GCTCTGGGGAGCACAACAGCAGTGCAGACACCCACC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCCACCCCGTTACGCTTaGCGCCTCTGCTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWPPRYA*RLCSAR
Trigger: TCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGCGCTAGTTGTGGGTaGTGGGTGAGGATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGASCG*WVRMAA
Trigger: TGCTGCCATCCTCACCCAGCACCCACAACTAGCGCC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGGCCCCACCCAGCCATaGTCCAGGCTGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTGPTQP*SRLAWG
Trigger: CCCCCAGGCCAGCCTGGAGCATGGCTGGGTGGGGCC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAAAACCCCTCTCCCCCTaGCTCTGTTCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPKPLSP*LCSQES
Trigger: GCTCTCCTGCGAACAGAGGCAGGGGGAGAGGGGTTT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGCCCTGGCCCATGTGTaGTCCTGGGCTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAALAHV*SWAVAW
Trigger: CCAGGCTACAGCCCAGGAGCACACATGGGCCAGGGC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCACTTTCGCCAGGGCAATaGGAGCCCTTCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPLSPGQ*EPFCSA
Trigger: GGCTGAGCAGAAGGGCTCGCATTGCCCTGGCGAAAG...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATTTACGCTAGAGACCTaGGGTCCACTGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPFTLET*GPLAPL
Trigger: CAGCGGGGCCAGTGGACCCCAGGTCTCTAGCGTAAA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCTCACTGGCCACCAGTaGCTCCTCCTCCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNLTGHQ*LLLPFE
Trigger: CTCAAAGGGGAGGAGGAGCCACTGGTGGCCAGTGAG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGAAGGTGCTGGAGGCTaGCTGAGATTCCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPEGAGG*LRFRPP
Trigger: TGGAGGCCGGAATCTCAGCCAGCCTCCAGCACCTTC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTCCTGGGCTGTAGCCTaGGCTGGTCTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNSWAVA*AGLKGS
Trigger: GCTGCCTTTGAGACCAGCCCAGGCTACAGCCCAGGA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATCCTGGGCTGTAGCCTaGGCTGGTCTCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPSWAVA*AGLKGS
Trigger: GCTGCCTTTGAGACCAGCCCAGGCTACAGCCCAGGA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTGGCAGCATGCCTCGTaGGTTCTCATCTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNWQHAS*VLIWVP
Trigger: CGGAACCCAGATGAGAACTCACGAGGCATGCTGCCA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATGGCAGCATGCCTCGTaGGTTCTCATCTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPWQHAS*VLIWVP
Trigger: CGGAACCCAGATGAGAACTCACGAGGCATGCTGCCA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAAAAAGGAGATTCGGGTaGGGATCAGGGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPKRRFG*GSGCRV
Trigger: CACCCGGCACCCTGATCCTCACCCGAATCTCCTTTT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATAAAAGGAGATTCGGGTaGGGATCAGGGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNKRRFG*GSGCRV
Trigger: CACCCGGCACCCTGATCCTCACCCGAATCTCCTTTT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGTTGTGGGTGCTGGGTaGGGATGGCAGCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNVVGAG*GWQQEI
Trigger: GATTTCCTGCTGCCATCCTCACCCAGCACCCACAAC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGCAGGTCAACCTGTCTaGTCTCAGCCACCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNAGQPV*SQPPQA
Trigger: AGCTTGCGGTGGCTGAGAGCAGACAGGTTGACCTGC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGCAGGTCAACCTGTCTaGTCTCAGCCACCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPAGQPV*SQPPQA
Trigger: AGCTTGCGGTGGCTGAGAGCAGACAGGTTGACCTGC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATACAGGCATGAGCCACTaGGCTGGATCTGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNTGMSH*AGSAPR
Trigger: ACGTGGAGCAGATCCAGCGCAGTGGCTCATGCCTGT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGGATTACGGGGGCATaGCACCACGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGITGA*HHAWLI
Trigger: AATTAGCCAGGCGTGGTGGCATGCCCCCGTAATCCC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATAAGGCTCTCCGGAGGTaGGTGTCTGCACTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNKALRR*VSALLL
Trigger: CAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCAGACCTGGGGTCCACTaGCCCCGCTGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLRPGVH*PRWRAP
Trigger: TGGAGCCCTCCAGCGGGGCCAGTGGACCCCAGGTCT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGAGACCTGGGGTCCACTaGCCCCGCTGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALRPGVH*PRWRAP
Trigger: TGGAGCCCTCCAGCGGGGCCAGTGGACCCCAGGTCT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGGAAGGTGCTGGAGGCTaGCTGAGATTCCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWEGAGG*LRFRPP
Trigger: TGGAGGCCGGAATCTCAGCCAGCCTCCAGCACCTTC...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTTCAGAGTGAAGAGGTaGGTGAGGAGGCAAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNFRVKR*VRRQGA
Trigger: CGCGCCTTGCCTCCTCACCCACCTCTTCACTCTGAA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAACAGTCCATGTGCCCTaGGAAAGATCACAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPTVHVP*ERSQAR
Trigger: GCGGGCCTGTGATCTTTCCCAGGGCACATGGACTGT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTCCTGGAAACGTGCAGTaGGGAAGCGCCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAPGNVQ*GSASQT
Trigger: GGTCTGGCTGGCGCTTCCCCACTGCACGTTTCCAGG...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGCCCATGTGTGCTCCTaGGCTGTAGCCTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAAHVCS*AVAWAG
Trigger: ACCAGCCCAGGCTACAGCCCAGGAGCACACATGGGC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGAGTGGGTGCCCAGCCTaGCTGGTAGAAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWSGCPA*LVEAGS
Trigger: GGAACCAGCTTCTACCAGCCAGGCTGGGCACCCACT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGTGATCGCAGCTACTTaGGAGGCCCAGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNVIAAT*EAQEVE
Trigger: CTCAACCTCCTGGGCCTCCCAAGTAGCTGCGATCAC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGATTCGCCCAGGACCTaGCTAAAACCAGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNDSPRT*LKPVLA
Trigger: AGCCAGGACTGGTTTTAGTCAGGTCCTGGGCGAATC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCACTGGTCTCAAACTCCTaGCCTCATGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPLVSNS*PHDLPT
Trigger: GGTGGGCAGATCATGAGGTCAGGAGTTTGAGACCAG...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGGTGGGAGGACCACTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAGGRTT*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGTGGTCCTCCCACC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGCAAGAGCTGGGACCTaGGGGAGGCAGGGAAGCGTG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALARAGT*GRQGSV
Trigger: CACGCTTCCCTGCCTCCCTCAGGTCCCAGCTCTTGC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395389.2
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATAGCAGGATGACTGGTTaGATGAGGGGTTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNSRMTG*MRGFLG
Trigger: CCCCAGGAAACCCCTCATGCAACCAGTCATCCTGCT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCTACGCTTGCCGCCTCTaGTCAGCACGAGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLYACRL*SARGPQ
Trigger: CTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTA...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTACGCTTGCCGCCTCTaGTCAGCACGAGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALYACRL*SARGPQ
Trigger: CTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAACTGAGATCGTGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPTEIVH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCACGATCTCAGT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTAAGGTGGTTGCGGGCTaGCCAGGTTCCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAKVVAG*PGSTAL
Trigger: AAGGGCTGTGGAACCTGGGCAGCCCGCAACCACCTT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCGTGAGGCCTCTGGCTaGCTCTGTCCATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALREASG*LCPWLG
Trigger: CCCCAGCCATGGACAGAGGCAGCCAGAGGCCTCACG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCTAAACCTGGAAACGTaGAGTGGGGAAGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWLNLET*SGEAPA
Trigger: GGCTGGCGCTTCCCCACTGCACGTTTCCAGGTTTAG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGCTCCCCAGAGCGTCTaGGCTTACCACCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALAPQSV*AYHQHP
Trigger: GGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGTAGGGCTGAGGTCTaGTCCCCAGTGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGRAEV*SPVLSA
Trigger: GGCCGACAGCACTGGGGACCAGACCTCAGCCCTACC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGGTAGGGCTGAGGTCTaGTCCCCAGTGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPGRAEV*SPVLSA
Trigger: GGCCGACAGCACTGGGGACCAGACCTCAGCCCTACC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGCACAGTGCTTGCGTTaGTGGAGGTCGTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPAQCLR*WRSLET
Trigger: TGTCTCCAACGACCTCCACCAACGCAAGCACTGTGC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCTGCCGGGTGGAAACATaGGAGCGAGGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLCRVET*ERGGSG
Trigger: CCCACTGCCCCCTCGCTCCCATGTTTCCACCCGGCA...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTGCCGGGTGGAAACATaGGAGCGAGGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALCRVET*ERGGSG
Trigger: CCCACTGCCCCCTCGCTCCCATGTTTCCACCCGGCA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCTGGTCAACCCAGGGTaGGTTCTGGGGGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWLVNPG*VLGEKE
Trigger: CTCCTTTTCCCCCAGAACCCACCCTGGGTTGACCAG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGAACCACACCCACGAGTaGACACACGCAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCENHTHE*THAGTG
Trigger: CCCAGTGCCTGCGTGTGTCCACTCGTGGGTGTGGTT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATAAATACCAACTGCCCTaGCCCATGTGTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNKYQLP*PMCAPG
Trigger: CCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGGGAAGCGTGGGATCTaGAATCAGGATTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPGKRGI*NQDSWL
Trigger: GAGCCAGGAATCCTGATTCCAGATCCCACGCTTCCC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395389.2
CDS-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAAGTGGTGTACATCTTTaGGCTCAGGGGCTCGCTAGT +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPSGVHL*AQGLAS
Trigger: ACTAGCGAGCCCCTGAGCTCAAAGATGTACACCACT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGAGGGGATCCCTCATTaGTGGAAGTTGAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNEGIPH*WKLREV
Trigger: TACCTCCCTCAACTTCCATCAATGAGGGATCCCCTC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGTGGCAGCATGCCTCGTaGGTTCTCATCTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEWQHAS*VLIWVP
Trigger: CGGAACCCAGATGAGAACTCACGAGGCATGCTGCCA...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGTGCTGGAGGCTGGCTaGGATTCCGGCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTVLEAG*DSGLQP
Trigger: AGGCTGGAGGCCGGAATCTCAGCCAGCCTCCAGCAC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAAGGCAGAGGTTGCAGTaGACTGAGATCGTGCATTGC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPRQRLQ*TEIVHC
Trigger: GCAATGCACGATCTCAGTTCACTGCAACCTCTGCCT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGTTGTGGGTGCTGGGTaGGGATGGCAGCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAVVGAG*GWQQEI
Trigger: GATTTCCTGCTGCCATCCTCACCCAGCACCCACAAC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTAAAGGGAGGTGGAGCTaGGGACAGCGACGTTCGTTC +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAKGRWS*GQRRSF
Trigger: GAACGAACGTCGCTGTCCTCAGCTCCACCTCCCTTT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGAGGTTGAGGCTGTGGTaGGCTGTGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWRLRLW*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACCACAGCCTCAACCT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCCGGAGGTGGGTGTCTaGACTGCTGTTGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALPEVGV*TAVVLP
Trigger: GGGGAGCACAACAGCAGTGCAGACACCCACCTCCGG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACATACGCTTGCCGCCTCTaGTCAGCACGAGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTYACRL*SARGPQ
Trigger: CTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTA...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCCACCCCGTTACGCTTaGCGCCTCTGCTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALPPRYA*RLCSAR
Trigger: TCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCAATCCTCCCTGCTCTaGCTCCCAAAGTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWQSSLL*LPKCWD
Trigger: ATCCCAGCACTTTGGGAGGCAGAGCAGGGAGGATTG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTAGGCTGGGGCAAGACTaGGAAGGACAGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPRLGQD*EGQGPK
Trigger: CTTGGGGCCCTGTCCTTCCCAGTCTTGCCCCAGCCT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360121.4
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTACCACCTCCCGAGGCTaGGGCAAGACTGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPTTSRG*GKTGKD
Trigger: GTCCTTCCCAGTCTTGCCCCAGCCTCGGGAGGTGGT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360121.4
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGATAAGGACGCAGCACTaGGGCCAGGTCACTCCACCA +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEIRTQH*GQVTPP
Trigger: TGGTGGAGTGACCTGGCCCCAGTGCTGCGTCCTTAT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGAGAAGGAGAAGCGTaGCCATTTCCAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGEGEA*PFPGKQ
Trigger: CTGTTTGCCTGGAAATGGCCACGCTTCTCCTTCTCC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCAGTGCTGGCACCAATaGAAGTCCAAAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNQCWHQ*KSKEGI
Trigger: GATCCCCTCTTTGGACTTCCATTGGTGCCAGCACTG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCACCTGTCACGGTGTaGGATCCTAGAGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNPPVTV*DPREFA
Trigger: AGCAAACTCTCTAGGATCCCACACCGTGACAGGTGG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCTCCACTGGTCCTACTaGAGGTTTCTGGAGAGTTCG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNLHWSY*RFLESS
Trigger: CGAACTCTCCAGAAACCTCCAGTAGGACCAGTGGAG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCACAGTGCTTGCGTTGGTaGAGGTCGTTGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPQCLRW*RSLETS
Trigger: TGATGTCTCCAACGACCTCCACCAACGCAAGCACTG...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGTTCAGAGTGAAGAGGTaGGTGAGGAGGCAAGGCGCG +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEFRVKR*VRRQGA
Trigger: CGCGCCTTGCCTCCTCACCCACCTCTTCACTCTGAA...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGAGAGCATGGGCTGGTaGCCCCACCCAGCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTESMGW*PHPAML
Trigger: GAGCATGGCTGGGTGGGGCCACCAGCCCATGCTCTC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAACCTGAGAGCATGGGCTaGTGGCCCCACCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQPESMG*WPHPAM
Trigger: CATGGCTGGGTGGGGCCACCAGCCCATGCTCTCAGG...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCTGGGGAGAGTGTGGTaGTGTGGGCCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLGRVW*CGPGPA
Trigger: GGCTGGCCCTGGCCCACACCACCACACTCTCCCCAG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGCTGCCTCTGTCCATaGCTGGGGAGAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGCLCP*LGRVWW
Trigger: CCACCACACTCTCCCCAGCCATGGACAGAGGCAGCC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGAGGCAGAGGTTGCAGTaGACTGAGATCGTGCATTGC +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWRQRLQ*TEIVHC
Trigger: GCAATGCACGATCTCAGTTCACTGCAACCTCTGCCT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCCATCAGAGCAAAGATaGCACGCACGTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWPSEQR*HARSQQ
Trigger: CTGCTGAGAACGTGCGTGTCATCTTTGCTCTGATGG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTCTGGTCTCAAACTCCTaGCCTCATGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWALVSNS*PHDLPT
Trigger: GGTGGGCAGATCATGAGGTCAGGAGTTTGAGACCAG...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTAGGTTGAGGCTGTGGTaGGCTGTGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWARLRLW*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACCACAGCCTCAACCT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTACCCAGGCTGGTCTTaGACTCCTAGACTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNYPGWS*TPRLKQ
Trigger: TTGCTTGAGTCTAGGAGTTCAAGACCAGCCTGGGTA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTCTGCACTGCTGTTGTaGTCCCCAGAGCGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALSALLL*SPERLG
Trigger: GCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTAGCAGGATGACTGGTTaGATGAGGGGTTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWASRMTG*MRGFLG
Trigger: CCCCAGGAAACCCCTCATGCAACCAGTCATCCTGCT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTTCCGGAAGGGCACAGTaGTTGCGTTGGTGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPSGRAQ*LRWWRS
Trigger: CGACCTCCACCAACGCAAGCACTGTGCCCTTCCGGA...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTCCGGAAGGGCACAGTaGTTGCGTTGGTGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALSGRAQ*LRWWRS
Trigger: CGACCTCCACCAACGCAAGCACTGTGCCCTTCCGGA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGACTGAGATCGTGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCETEIVH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCACGATCTCAGT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAACTTTCCCCCATCTCCTaGCCAGGCCACAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQLSPIS*PGHRAG
Trigger: CCCTGCTCTGTGGCCTGGGCAGGAGATGGGGGAAAG...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGCTCCCCAGAGCGTCTaGGCTTACCACCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPAPQSV*AYHQHP
Trigger: GGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGGCACAGTGCTTGCGTTaGTGGAGGTCGTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEAQCLR*WRSLET
Trigger: TGTCTCCAACGACCTCCACCAACGCAAGCACTGTGC...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAATCGCCAGGGAGCCCTaGCGAGACTTCCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTIAREP*RDFRLP
Trigger: TGGCAGACGGAAGTCTCGCCAGGGCTCCCTGGCGAT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCTCACTGGCCACCAGTaGCTCCTCCTCCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALLTGHQ*LLLPFE
Trigger: CTCAAAGGGGAGGAGGAGCCACTGGTGGCCAGTGAG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGATAAGTTTGGCCGATaGAGACTCAGCAGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPDKFGR*RLSSRF
Trigger: GAAACGGCTGCTGAGTCTCCATCGGCCAAACTTATC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGCTTCTTCCCAGACTCTaGTCAACCCAGGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCELLPRL*STQGGF
Trigger: GAACCCACCCTGGGTTGACCAGAGTCTGGGAAGAAG...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGTTCCTCTTGGAGGATaGAAGGGGCTCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPVPLGG*KGLSPW
Trigger: CCAGGGGCTGAGCCCCTTCCATCCTCCAAGAGGAAC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTCTCACTGGTTCCTCTTaGAGGATGGAAGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWALTGSS*RMEGAQ
Trigger: CTGAGCCCCTTCCATCCTCCAAGAGGAACCAGTGAG...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGCCCATGTGTGCTCCTaGGCTGTAGCCTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTAHVCS*AVAWAG
Trigger: ACCAGCCCAGGCTACAGCCCAGGAGCACACATGGGC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTAAATACCAACTGCCCTaGCCCATGTGTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAKYQLP*PMCAPG
Trigger: CCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAAGGATTCCTGGCTCTTaGCTGAGGAATGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPRIPGS*LRNGME
Trigger: TTCCATCCCATTCCTCAGCCAAGAGCCAGGAATCCT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395389.2
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGCACTGATGACATCTTaGTGGAAACTTCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNALMTS*WKLPGR
Trigger: CCTACCAGGAAGTTTCCATCAAGATGTCATCAGTGC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGAGGTTGCAGTGAACTaGGATCGTGCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAEVAVN*DRALHS
Trigger: GGAGTGCAATGCACGATCTCAGTTCACTGCAACCTC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGTTGTGGGTGCTGGGTaGGGATGGCAGCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLVVGAG*GWQQEI
Trigger: GATTTCCTGCTGCCATCCTCACCCAGCACCCACAAC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACATCGGAGGAGAAACCGTaGGGCCTCTGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTSEEKP*GLWLPL
Trigger: CAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGA...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGAAAGGGAGGTGGAGCTaGGGACAGCGACGTTCGTTC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALKGRWS*GQRRSF
Trigger: GAACGAACGTCGCTGTCCTCAGCTCCACCTCCCTTT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACACCGGAGGTGGGTGTCTaGACTGCTGTTGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTPEVGV*TAVVLP
Trigger: GGGGAGCACAACAGCAGTGCAGACACCCACCTCCGG...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGTAAAGGGGAACCAGTaGTGGCACCAATGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAVKGNQ*WHQWKS
Trigger: GGACTTCCATTGGTGCCAGCACTGGTTCCCCTTTAC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGAAGGGCACAGTGCTTaGGTTGGTGGAGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALEGHSA*VGGGRW
Trigger: CCAACGACCTCCACCAACGCAAGCACTGTGCCCTTC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGTTAGGAGGCAGAGGTTaGAGTGAACTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWLGGRG*SELRSC
Trigger: GCACGATCTCAGTTCACTGCAACCTCTGCCTCCTAA...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTACAGACGTTGAGAGGTaGCAGCCCTGCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPTDVER*QPCPAQ
Trigger: CTGGGCAGGGCAGGGCTGGCACCTCTCAACGTCTGT...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCAGAGCTAAAGGTGGTTaGGGGCTGCCCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLRAKGG*GLPRFH
Trigger: GTGGAACCTGGGCAGCCCGCAACCACCTTTAGCTCT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGTCAAGCAATCTTCCCTaGCTTCGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWSSNLP*LRLLSS
Trigger: GCTACTCAAGAGGCGAAGGCAGGGAAGATTGCTTGA...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGGATTACGGGGGCATaGCACCACGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLGITGA*HHAWLI
Trigger: AATTAGCCAGGCGTGGTGGCATGCCCCCGTAATCCC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCAAGGCTCTCCGGAGGTaGGTGTCTGCACTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLKALRR*VSALLL
Trigger: CAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGAAGGGGAACCAGTGCTaGCACCAATGGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWKGNQC*HQWKSK
Trigger: TTTGGACTTCCATTGGTGCCAGCACTGGTTCCCCTT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGCCACCTGTCACGGTGTaGGATCCTAGAGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEPPVTV*DPREFA
Trigger: AGCAAACTCTCTAGGATCCCACACCGTGACAGGTGG...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGAGAGTTCGTTGTTATaGTTCCACCTGTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNESSLL*FHLSRC
Trigger: ACACCGTGACAGGTGGAACCATAACAACGAACTCTC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGCAGTGCTTGCGTTGGTaGAGGTCGTTGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEQCLRW*RSLETS
Trigger: TGATGTCTCCAACGACCTCCACCAACGCAAGCACTG...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTTTCAGAGTGAAGAGGTaGGTGAGGAGGCAAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPFRVKR*VRRQGA
Trigger: CGCGCCTTGCCTCCTCACCCACCTCTTCACTCTGAA...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGCTAGTTGTGGGTGCTaGGTGAGGATGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPASCGC*VRMAAG
Trigger: TCCTGCTGCCATCCTCACCCAGCACCCACAACTAGC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGCTAGTTGTGGGTGCTaGGTGAGGATGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALASCGC*VRMAAG
Trigger: TCCTGCTGCCATCCTCACCCAGCACCCACAACTAGC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACACCTGGAAACGTGCAGTaGGGAAGCGCCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTPGNVQ*GSASQT
Trigger: GGTCTGGCTGGCGCTTCCCCACTGCACGTTTCCAGG...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGGCTGTAGCCTGGGCTaGTCTCAAAGGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPGCSLG*SQRQHH
Trigger: ATGGTGCTGCCTTTGAGACCAGCCCAGGCTACAGCC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTATGTGCACACACGCATaGCTTGGTAGGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWAMCTHA*LGRLHL
Trigger: CAGGTGAAGCCTACCAAGCCATGCGTGTGTGCACAT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCAAACTCCTGACCTCATaGTCTGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLKLLTS*SAHLGL
Trigger: GAGGCCAAGGTGGGCAGATCATGAGGTCAGGAGTTT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCGACACACTCTCAGGTaGAGCCTTCCAACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALRHTLR*SLPTFR
Trigger: GCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCGACACACTCTCAGGTaGAGCCTTCCAACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPRHTLR*SLPTFR
Trigger: GCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCG...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGATCAAGCAGTGGATATaGCAAAGGCCACGACACACT +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWIKQWI*QRPRHT
Trigger: AGTGTGTCGTGGCCTTTGTCATATCCACTGCTTGAT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACAGGTGGGAGGACCACTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTGGRTT*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGTGGTCCTCCCACC...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTTCCTGGCTCTTGGCTaGGGAATGGGATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALFLALG*GMGWKW
Trigger: CCACTTCCATCCCATTCCTCAGCCAAGAGCCAGGAA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395389.2
CDS-3UTR GCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTAGCAGGATGACTGGTTaGATGAGGGGTTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPSRMTG*MRGFLG
Trigger: CCCCAGGAAACCCCTCATGCAACCAGTCATCCTGCT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCCTCCAGAGAGACAGTTaGCATGGTAAGAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLLQRDS*HGKRGS
Trigger: GGACCCCCTCTTACCATGGCAACTGTCTCTCTGGAG...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCTCCAGAGAGACAGTTaGCATGGTAAGAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALLQRDS*HGKRGS
Trigger: GGACCCCCTCTTACCATGGCAACTGTCTCTCTGGAG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAGAAGGGCACAGTGCTTaGGTTGGTGGAGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQEGHSA*VGGGRW
Trigger: CCAACGACCTCCACCAACGCAAGCACTGTGCCCTTC...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCAGCCACTGGCAGCATaGCTCGTGAGTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPQPLAA*LVSSHL
Trigger: CAGATGAGAACTCACGAGGCATGCTGCCAGTGGCTG...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCAGCCACTGGCAGCATaGCTCGTGAGTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALQPLAA*LVSSHL
Trigger: CAGATGAGAACTCACGAGGCATGCTGCCAGTGGCTG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGGCGCTAGTTGTGGGTaGTGGGTGAGGATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPGASCG*WVRMAA
Trigger: TGCTGCCATCCTCACCCAGCACCCACAACTAGCGCC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGCAAATCCTCAGCTCTTaGACACAAACCACACCCACG +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEQILSS*TQTTPT
Trigger: CGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTG...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCGCCCTGGCCCATGTGTaGTCCTGGGCTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSALAHV*SWAVAW
Trigger: CCAGGCTACAGCCCAGGAGCACACATGGGCCAGGGC...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGAAAAGGCCACCAGATaGAGCCCAGTGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPEKATR*SPVGAQ
Trigger: CTGGGCACCCACTGGGCTGCATCTGGTGGCCTTTTC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATCCTTTTCCCAGCTTTaGAAAATCCTTCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPSFSQL*KILPSL
Trigger: AAGGCTGGGAAGGATTTTGCAAAGCTGGGAAAAGGA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTCCTTTTCCCAGCTTTaGAAAATCCTTCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNSFSQL*KILPSL
Trigger: AAGGCTGGGAAGGATTTTGCAAAGCTGGGAAAAGGA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTACCTGCTATCCCCTCTaGTGGGAATGCCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWATCYPL*WECLFL
Trigger: AAGGAAAAGGCATTCCCAGCAGAGGGGATAGCAGGT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAACAGGCATGAGCCACTaGGCTGGATCTGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTTGMSH*AGSAPR
Trigger: ACGTGGAGCAGATCCAGCGCAGTGGCTCATGCCTGT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCTACTGGAGGTTTCTaGAGAGTTCGTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNPTGGF*RVRCYG
Trigger: ACCATAACAACGAACTCTCCAGAAACCTCCAGTAGG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACATTTACGCTAGAGACCTaGGGTCCACTGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTFTLET*GPLAPL
Trigger: CAGCGGGGCCAGTGGACCCCAGGTCTCTAGCGTAAA...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGGGGCTCATCAGGAGCTaGGGCGTCCACAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELGLIRS*GVHSPI
Trigger: GATGGGGCTGTGGACGCCCCAGCTCCTGATGAGCCC...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAAAGGGGCTCAGCCCCTaGGATGGAAGAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQKGLSP*DGRGDT
Trigger: TGTGTCTCCTCTTCCATCCCAGGGGCTGAGCCCCTT...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCTCACTGGTTCCTCTTaGAGGATGGAAGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALLTGSS*RMEGAQ
Trigger: CTGAGCCCCTTCCATCCTCCAAGAGGAACCAGTGAG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCTGGCTGGTAGAAGCTaGTTCCATCCGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALLAGRS*FHPSSA
Trigger: AGCTGAGCTCGGATGGAACCAGCTTCTACCAGCCAG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAGTGATCGCAGCTACTTaGGAGGCCCAGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQVIAAT*EAQEVE
Trigger: CTCAACCTCCTGGGCCTCCCAAGTAGCTGCGATCAC...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGATTAGCTGGGCATGTTaGTGCACACCTGTGATCGCA +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEISWAC*CTPVIA
Trigger: TGCGATCACAGGTGTGCACCAACATGCCCAGCTAAT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTTGGGGAAGCTTAGGTaGGAGGACCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALLGKLR*EDHLSP
Trigger: TGGGCTCAAGTGGTCCTCCCACCTAAGCTTCCCCAA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTATAATCCCAGTATTTaGGGAAGCTTAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNYNPSI*GSLGGR
Trigger: CCTCCCACCTAAGCTTCCCCAAATACTGGGATTATA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATATAATCCCAGTATTTaGGGAAGCTTAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPYNPSI*GSLGGR
Trigger: CCTCCCACCTAAGCTTCCCCAAATACTGGGATTATA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGAGGCAGGGAAGCGTaGGATCTGGAATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGGREA*DLESGF
Trigger: GAATCCTGATTCCAGATCCCACGCTTCCCTGCCTCC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395389.2
3UTR CAA 72 bp AACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTaGCACACAAACCACACCCACGAGTGGACACACGCA +
Preference number: 4 (lower is better)
Translates to: NYPSQASPNPQL*HTNHTHEWTHA
Trigger: TGCGTGTGTCCACTCGTGGGTGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGAGGTTGCAGTGAACTaGGATCGTGCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALEVAVN*DRALHS
Trigger: GGAGTGCAATGCACGATCTCAGTTCACTGCAACCTC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGTCAGTCCACAGACGTTaGGAGGTGCCAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELSVHRR*EVPALP
Trigger: GGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGA...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATAGGGATTACCATGGCTaGGCTGAAGAACTCATATTT +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNRDYHG*AEELIF
Trigger: AAATATGAGTTCTTCAGCTCAGCCATGGTAATCCCT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAGATTCGCCCAGGACCTaGCTAAAACCAGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQDSPRT*LKPVLA
Trigger: AGCCAGGACTGGTTTTAGTCAGGTCCTGGGCGAATC...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAAAACTCCTGACCTCATaGTCTGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTKLLTS*SAHLGL
Trigger: GAGGCCAAGGTGGGCAGATCATGAGGTCAGGAGTTT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGATCAAGCAGTGGATATaGCAAAGGCCACGACACACT +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEIKQWI*QRPRHT
Trigger: AGTGTGTCGTGGCCTTTGTCATATCCACTGCTTGAT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGGCTGTGGTGAGCTGTaGTTGCACCACTGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPGCGEL*LHHCPL
Trigger: TAGAGGGCAGTGGTGCAATCACAGCTCACCACAGCC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGTAAAGGGGAACCAGTaGTGGCACCAATGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALVKGNQ*WHQWKS
Trigger: GGACTTCCATTGGTGCCAGCACTGGTTCCCCTTTAC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR GCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACACTCCAGAGAGACAGTTaGCATGGTAAGAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTLQRDS*HGKRGS
Trigger: GGACCCCCTCTTACCATGGCAACTGTCTCTCTGGAG...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGAAGGGCACAGTGCTTaGGTTGGTGGAGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPEGHSA*VGGGRW
Trigger: CCAACGACCTCCACCAACGCAAGCACTGTGCCCTTC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCAGCCTACAGTCCATGTaGCCTGGGAAAGATCACAGG +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLSLQSM*PGKDHR
Trigger: CCTGTGATCTTTCCCAGGGCACATGGACTGTAGGCT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCCTTTCCCCCATCTCCTaGCCAGGCCACAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSLSPIS*PGHRAG
Trigger: CCCTGCTCTGTGGCCTGGGCAGGAGATGGGGGAAAG...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGAAAGCCCTGTTGGGTaGCTTCCTTACCCGTACTAC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALESPVG*LPYPYY
Trigger: GTAGTACGGGTAAGGAAGGCACCCAACAGGGCTTTC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCTGAGAGTTATGAATaGACCATTTTCCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNPESYE*TIFLGA
Trigger: TGCACCAAGGAAAATGGTGCATTCATAACTCTCAGG...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCCAATGCGAGCCCTTCTaGTCAGCCACTGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLQCEPF*SATGIS
Trigger: AGAGATTCCAGTGGCTGAGCAGAAGGGCTCGCATTG...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTATAAGGACGCAGCACTaGGGCCAGGTCACTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPIRTQH*GQVTPP
Trigger: TGGTGGAGTGACCTGGCCCCAGTGCTGCGTCCTTAT...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGAAGGAGAAGCGTaGCCATTTCCAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLGEGEA*PFPGKQ
Trigger: CTGTTTGCCTGGAAATGGCCACGCTTCTCCTTCTCC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGCTCCCCAGAGCGTCTaGGCTTACCACCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSAPQSV*AYHQHP
Trigger: GGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCATCGCCAGGGAGCCCTaGCGAGACTTCCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSIAREP*RDFRLP
Trigger: TGGCAGACGGAAGTCTCGCCAGGGCTCCCTGGCGAT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACACTTCTTCCCAGACTCTaGTCAACCCAGGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTLLPRL*STQGGF
Trigger: GAACCCACCCTGGGTTGACCAGAGTCTGGGAAGAAG...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGGAGAGTGTGGTGGTGTaGGCCAGGGCCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELESVVV*ARASLQ
Trigger: CTGTAGGCTGGCCCTGGCCCACACCACCACACTCTC...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGATGTGCACACACGCATaGCTTGGTAGGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALMCTHA*LGRLHL
Trigger: CAGGTGAAGCCTACCAAGCCATGCGTGTGTGCACAT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACATTGGGGAAGCTTAGGTaGGAGGACCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTLGKLR*EDHLSP
Trigger: TGGGCTCAAGTGGTCCTCCCACCTAAGCTTCCCCAA...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTAGCTTCTCAAGTAGCTaGTACTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: PLCPREIPTALAHVCSWASFSSS*YYRHAP
Trigger: TGGTGCATGCCTGTAGTACCAGCTACTTGAGAAGCT...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGAGGGGATCCCTCATTaGTGGAAGTTGAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTEGIPH*WKLREV
Trigger: TACCTCCCTCAACTTCCATCAATGAGGGATCCCCTC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATATAAATAGGGGTGGATaGGGAGGGTTTATTCATTCA +
Preference number: 4 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNINRGG*GGFIHS
Trigger: TGAATGAATAAACCCTCCTCATCCACCCCTATTTAT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCATACGATCTTTCCATaGAGCCTGGCTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWHTIFP*SLAFFF
Trigger: GAAAAAGAAAGCCAGGCTTCATGGAAAGATCGTATG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCAAGGTGGTTGCGGGCTaGCCAGGTTCCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSKVVAG*PGSTAL
Trigger: AAGGGCTGTGGAACCTGGGCAGCCCGCAACCACCTT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTCGGGAAATACCAACTaGCCTGGCCCATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPSGNTN*PGPCVL
Trigger: GAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGA...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCTTTCGCCAGGGCAATaGGAGCCCTTCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELLSPGQ*EPFCSA
Trigger: GGCTGAGCAGAAGGGCTCGCATTGCCCTGGCGAAAG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCGGTAGGGCTGAGGTCTaGTCCCCAGTGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCGRAEV*SPVLSA
Trigger: GGCCGACAGCACTGGGGACCAGACCTCAGCCCTACC...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAACAGTGCTGGCACCAATaGAAGTCCAAAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQQCWHQ*KSKEGI
Trigger: GATCCCCTCTTTGGACTTCCATTGGTGCCAGCACTG...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCAAGGGGAACCAGTGCTaGCACCAATGGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLKGNQC*HQWKSK
Trigger: TTTGGACTTCCATTGGTGCCAGCACTGGTTCCCCTT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGAAGGGGAACCAGTGCTaGCACCAATGGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALKGNQC*HQWKSK
Trigger: TTTGGACTTCCATTGGTGCCAGCACTGGTTCCCCTT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGAACAGCAGGATGACTaGTTGCATGAGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALEQQDD*LHEGFP
Trigger: AGGAAACCCCTCATGCAACCAGTCATCCTGCTGTTC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGAACAGCAGGATGACTaGTTGCATGAGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLEQQDD*LHEGFP
Trigger: AGGAAACCCCTCATGCAACCAGTCATCCTGCTGTTC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCCACTGTGCTCACCCTaGCATTCTGTATGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPPLCSP*HSVWGY
Trigger: GTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCTGGCTGGTAGAAGCTaGTTCCATCCGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLAGRS*FHPSSA
Trigger: AGCTGAGCTCGGATGGAACCAGCTTCTACCAGCCAG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTAGGCTGGTTTCAAACTaGCCTCATGATCTGACTGCC +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPRLVSN*PHDLTA
Trigger: GGCAGTCAGATCATGAGGCCAGTTTGAAACCAGCCT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGGAAAACATTTGCGATaGGTCCTTTGTTTCCCTATA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPGKHLR*VLCFPI
Trigger: TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR TCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTAGTGGTGTACATCTTTaGGCTCAGGGGCTCGCTAGT +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPSGVHL*AQGLAS
Trigger: ACTAGCGAGCCCCTGAGCTCAAAGATGTACACCACT...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGCACTGATGACATCTTaGTGGAAACTTCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALALMTS*WKLPGR
Trigger: CCTACCAGGAAGTTTCCATCAAGATGTCATCAGTGC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR TCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGAGGTTGCAGTGAACTaGGATCGTGCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPEVAVN*DRALHS
Trigger: GGAGTGCAATGCACGATCTCAGTTCACTGCAACCTC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCAGCCTTCAAATATCTaGGGCAAGCCTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPQPSNI*GKPGHS
Trigger: ACTGTGCCCAGGCTTGCCTCAGATATTTGAAGGCTG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACATACCCAGGCTGGTCTTaGACTCCTAGACTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTYPGWS*TPRLKQ
Trigger: TTGCTTGAGTCTAGGAGTTCAAGACCAGCCTGGGTA...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCACTGGCCTCATGATCTaGCTGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSTGLMI*LPRPPK
Trigger: TTTGGGAGGCCGAGGCAGTCAGATCATGAGGCCAGT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGGTGGGTGTCTGCACTaGTGTTGTGCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSGGCLH*CCAPQS
Trigger: GCTCTGGGGAGCACAACAGCAGTGCAGACACCCACC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCCAGTCCGCCGCTTCTaGCGCCGGCGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYPVRRF*RRRHSR
Trigger: CCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATATACGCTTGCCGCCTCTaGTCAGCACGAGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIYACRL*SARGPQ
Trigger: CTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTA...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGAGAGAGAGCGCACATaGATGTGTACTGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALERERT*MCTAEM
Trigger: CATTTCTGCAGTACACATGCATGTGCGCTCTCTCTC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAATGGCCTCTGTCATTCTaGAGCTGCAGTGAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQWPLSF*SCSESK
Trigger: TTTGGACTCACTGCAGCTGCAGAATGACAGAGGCCA...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAGCTCCCCAGAGCGTCTaGGCTTACCACCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIAPQSV*AYHQHP
Trigger: GGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGC...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCACACTTGTTATTGAAGTaGTGTACATCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPHLLLK*CTSLSS
Trigger: TGAGCTCAAAGATGTACACCACTTCAATAACAAGTG...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCCACCTGTCACGGTGTaGGATCCTAGAGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPPPVTV*DPREFA
Trigger: AGCAAACTCTCTAGGATCCCACACCGTGACAGGTGG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGAGAGTTCGTTGTTATaGTTCCACCTGTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLESSLL*FHLSRC
Trigger: ACACCGTGACAGGTGGAACCATAACAACGAACTCTC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATCGCCAGGGAGCCCTaGCGAGACTTCCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCIAREP*RDFRLP
Trigger: TGGCAGACGGAAGTCTCGCCAGGGCTCCCTGGCGAT...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATATGCCGGGTGGAAACATaGGAGCGAGGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPICRVET*ERGGSG
Trigger: CCCACTGCCCCCTCGCTCCCATGTTTCCACCCGGCA...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGCCTCTGTCCATGGCTaGGGAGAGTGTGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSASVHG*GECGGV
Trigger: CACACCACCACACTCTCCCCAGCCATGGACAGAGGC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAAACCACACCCACGAGTaGACACACGCAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSNHTHE*THAGTG
Trigger: CCCAGTGCCTGCGTGTGTCCACTCGTGGGTGTGGTT...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGAAGGGATTTTGGACATaGCCTCTGTCATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALKGFWT*PLSFCS
Trigger: GCTGCAGAATGACAGAGGCCATGTCCAAAATCCCTT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTAAGGGATTTTGGACATaGCCTCTGTCATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPKGFWT*PLSFCS
Trigger: GCTGCAGAATGACAGAGGCCATGTCCAAAATCCCTT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAAGCCTCCTAAGTAGCTaGGATTACAGGAGCACACCA +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTSLLSS*DYRSTP
Trigger: TGGTGTGCTCCTGTAATCCCAGCTACTTAGGAGGCT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAATTAGCTGGGCATGTTaGTGCACACCTGTGATCGCA +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTISWAC*CTPVIA
Trigger: TGCGATCACAGGTGTGCACCAACATGCCCAGCTAAT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAAGGCTGGTTTCAAACTaGCCTCATGATCTGACTGCC +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTRLVSN*PHDLTA
Trigger: GGCAGTCAGATCATGAGGCCAGTTTGAAACCAGCCT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTTCAGTCCACAGACGTTaGGAGGTGCCAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFSVHRR*EVPALP
Trigger: GGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGA...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR TCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTATTCTGCAGCTGCAGTaGGTCCAAATAGCAATCAGA +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPILQLQ*VQIAIR
Trigger: TCTGATTGCTATTTGGACTCACTGCAGCTGCAGAAT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAGCGACGTTCGTTCGGTaGCAGTATTTTCTAAACCTG +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQATFVR*QYFLNL
Trigger: CAGGTTTAGAAAATACTGTCACCGAACGAACGTCGC...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAACTGGCCTCATGATCTaGCTGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSTGLMI*LPRPPK
Trigger: TTTGGGAGGCCGAGGCAGTCAGATCATGAGGCCAGT...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCACTAAACCTGGAAACGTaGAGTGGGGAAGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSLNLET*SGEAPA
Trigger: GGCTGGCGCTTCCCCACTGCACGTTTCCAGGTTTAG...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGCACCATTTTCCTTGGTaGATTCATAACACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWHHFPW*IHNTVC
Trigger: ACAAACAGTGTTATGAATGCACCAAGGAAAATGGTG...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACACCTCAAAGTCTCCCTTaGCACAGTACACATGCATGG +
Preference number: 4 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTPQSLP*HSTHAW
Trigger: CCATGCATGTGTACTGTGGCAAGGGAGACTTTGAGG...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCTTATGTATTTCCACCTaGTATCCCCTCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLLCIST*YPLCWE
Trigger: TTCCCAGCAGAGGGGATAGCAGGTGGAAATACATAA...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCAATCCTCCCTGCTCTaGCTCCCAAAGTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELQSSLL*LPKCWD
Trigger: ATCCCAGCACTTTGGGAGGCAGAGCAGGGAGGATTG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTCAAGCAATCTTCCCTaGCTTCGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPSSNLP*LRLLSS
Trigger: GCTACTCAAGAGGCGAAGGCAGGGAAGATTGCTTGA...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCCTACTGGAGGTTTCTaGAGAGTTCGTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALPTGGF*RVRCYG
Trigger: ACCATAACAACGAACTCTCCAGAAACCTCCAGTAGG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTAGACCTGGGGTCCACTaGCCCCGCTGGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVRPGVH*PRWRAP
Trigger: TGGAGCCCTCCAGCGGGGCCAGTGGACCCCAGGTCT...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGTCTCTAAGGGATTTTaGACATGGCCTCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPVSKGF*TWPLSF
Trigger: GAATGACAGAGGCCATGTCCAAAATCCCTTAGAGAC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAGGGGTTTCATCATATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTGVSSY*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAATATGATGAAACCCC...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAGGGGTTTCATCATATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQGVSSY*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAATATGATGAAACCCC...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTAGCCTCCTAAGTAGCTaGGATTACAGGAGCACACCA +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPSLLSS*DYRSTP
Trigger: TGGTGTGCTCCTGTAATCCCAGCTACTTAGGAGGCT...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAACTTCTGCTCAGCCACTaGAATCTCTTCCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQLLLSH*NLFLKV
Trigger: GACTTTGAGGAAGAGATTCCAGTGGCTGAGCAGAAG...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGAAAATTAGCCAGGTGTaGTGGTTCTCATATGTAGAA +
Preference number: 4 (lower is better)
Translates to: QPETRRRNREASGCLCPWKISQV*WFSYVE
Trigger: TTCTACATATGAGAACCACCACACCTGGCTAATTTT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCAAAAGGAGATTCGGGTaGGGATCAGGGTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCKRRFG*GSGCRV
Trigger: CACCCGGCACCCTGATCCTCACCCGAATCTCCTTTT...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR TCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAAGGCACTGGGGTTTCTaGGAACTACACCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSRHWGF*ELHPAR
Trigger: TCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCT...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACAATTCTGCAGCTGCAGTaGGTCCAAATAGCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTILQLQ*VQIAIR
Trigger: TCTGATTGCTATTTGGACTCACTGCAGCTGCAGAAT...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTTCTGCACTGCTGTTGTaGTCCCCAGAGCGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFSALLL*SPERLG
Trigger: GCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGA...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGAGTGAACTGAGATCGTaGATTGCACTCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELSELRS*IALQPG
Trigger: CCCAGGCTGGAGTGCAATGCACGATCTCAGTTCACT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCATCGGGAAATACCAACTaGCCTGGCCCATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSSGNTN*PGPCVL
Trigger: GAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGA...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAGAAAAGGCCACCAGATaGAGCCCAGTGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIEKATR*SPVGAQ
Trigger: CTGGGCACCCACTGGGCTGCATCTGGTGGCCTTTTC...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACACCACCGCATAGCCACTaGACCCAACTATTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTPPHSH*TQLFSY
Trigger: GTAAGAAAATAGTTGGGTGCAGTGGCTATGCGGTGG...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCAGTGCTGGCACCAATaGAAGTCCAAAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELQCWHQ*KSKEGI
Trigger: GATCCCCTCTTTGGACTTCCATTGGTGCCAGCACTG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTGAGAGTTCGTTGTTATaGTTCCACCTGTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPESSLL*FHLSRC
Trigger: ACACCGTGACAGGTGGAACCATAACAACGAACTCTC...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATATTTACGCTAGAGACCTaGGGTCCACTGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIFTLET*GPLAPL
Trigger: CAGCGGGGCCAGTGGACCCCAGGTCTCTAGCGTAAA...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGCACAGTGCTTGCGTTaGTGGAGGTCGTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSAQCLR*WRSLET
Trigger: TGTCTCCAACGACCTCCACCAACGCAAGCACTGTGC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAGAAGGTGCTGGAGGCTaGCTGAGATTCCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIEGAGG*LRFRPP
Trigger: TGGAGGCCGGAATCTCAGCCAGCCTCCAGCACCTTC...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCGCTAGTTGTGGGTGCTaGGTGAGGATGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCASCGC*VRMAAG
Trigger: TCCTGCTGCCATCCTCACCCAGCACCCACAACTAGC...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCTGGGGAGAGTGTGGTaGTGTGGGCCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYLGRVW*CGPGPA
Trigger: GGCTGGCCCTGGCCCACACCACCACACTCTCCCCAG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGGGTGCCCAGCCTaGCTGGTAGAAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPISGCPA*LVEAGS
Trigger: GGAACCAGCTTCTACCAGCCAGGCTGGGCACCCACT...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGAAAATTAGCCAGGTGTaGTGGTTCTCATATGTAGAA +
Preference number: 4 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEKISQV*WFSYVE
Trigger: TTCTACATATGAGAACCACCACACCTGGCTAATTTT...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCTGGTCTCAAACTCCTaGCTTCAAGCAGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELLVSNS*LQAVLL
Trigger: CAGGAGGACTGCTTGAAGCCAGGAGTTTGAGACCAG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCCTTTGGAGATCAGCATaGAAAACATTTGCGATGGGT +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLLWRSA*KTFAMG
Trigger: ACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAG...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
3UTR CAA 72 bp CAAGGGTGCTTTACAAAGTTAATCCTAGGAGGGAGTTaGCCGGGTTCTCTTGTCCTTCTTCCCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: QGCFTKLILGGS*PGSLVLLPRLW
Trigger: CCAGAGTCTGGGAAGAAGGACAAGAGAACCCGGCAAACTCCCTCCTAGGATTAACTTTGTAAAGCACCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATGTGCTGGAGGCTGGCTaGGATTCCGGCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYVLEAG*DSGLQP
Trigger: AGGCTGGAGGCCGGAATCTCAGCCAGCCTCCAGCAC...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR TCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCATAAATAGGGGTGGATaGGGAGGGTTTATTCATTCA +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLINRGG*GGFIHS
Trigger: TGAATGAATAAACCCTCCTCATCCACCCCTATTTAT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACACATACGATCTTTCCATaGAGCCTGGCTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTHTIFP*SLAFFF
Trigger: GAAAAAGAAAGCCAGGCTTCATGGAAAGATCGTATG...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCACAGCCTTCAAATATCTaGGGCAAGCCTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSQPSNI*GKPGHS
Trigger: ACTGTGCCCAGGCTTGCCTCAGATATTTGAAGGCTG...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCATGGAGTGCAGTGGCATaGTCACAGCTCACTATAGCC +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSWSAVA*SQLTIA
Trigger: GGCTATAGTGAGCTGTGATCATGCCACTGCACTCCA...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTCCGGAGGTGGGTGTCTaGACTGCTGTTGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVPEVGV*TAVVLP
Trigger: GGGGAGCACAACAGCAGTGCAGACACCCACCTCCGG...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTGAAGGGCACAGTGCTTaGGTTGGTGGAGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFEGHSA*VGGGRW
Trigger: CCAACGACCTCCACCAACGCAAGCACTGTGCCCTTC...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTCCACCCCGTTACGCTTaGCGCCTCTGCTCAGCACGA +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVPPRYA*RLCSAR
Trigger: TCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGG...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAAGTGAACTGAGATCGTaGATTGCACTCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSSELRS*IALQPG
Trigger: CCCAGGCTGGAGTGCAATGCACGATCTCAGTTCACT...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCTTAGGAGGCAGAGGTTaGAGTGAACTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSLGGRG*SELRSC
Trigger: GCACGATCTCAGTTCACTGCAACCTCTGCCTCCTAA...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCGTGAGGCCTCTGGCTaGCTCTGTCCATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYREASG*LCPWLG
Trigger: CCCCAGCCATGGACAGAGGCAGCCAGAGGCCTCACG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCTGGCCTCTGTCATTCTaGAGCTGCAGTGAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSWPLSF*SCSESK
Trigger: TTTGGACTCACTGCAGCTGCAGAATGACAGAGGCCA...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGAAAGCCCTGTTGGGTaGCTTCCTTACCCGTACTAC +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSESPVG*LPYPYY
Trigger: GTAGTACGGGTAAGGAAGGCACCCAACAGGGCTTTC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGACCTGCTATCCCCTCTaGTGGGAATGCCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELTCYPL*WECLFL
Trigger: AAGGAAAAGGCATTCCCAGCAGAGGGGATAGCAGGT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTATGTATTTCCACCTaGTATCCCCTCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLCIST*YPLCWE
Trigger: TTCCCAGCAGAGGGGATAGCAGGTGGAAATACATAA...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTATAAGGACGCAGCACTaGGGCCAGGTCACTCCACCA +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFIRTQH*GQVTPP
Trigger: TGGTGGAGTGACCTGGCCCCAGTGCTGCGTCCTTAT...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGGAGAAGGAGAAGCGTaGCCATTTCCAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSGEGEA*PFPGKQ
Trigger: CTGTTTGCCTGGAAATGGCCACGCTTCTCCTTCTCC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTAAGGCTCTCCGGAGGTaGGTGTCTGCACTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFKALRR*VSALLL
Trigger: CAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTT...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCGAACAGCAGGATGACTaGTTGCATGAGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSEQQDD*LHEGFP
Trigger: AGGAAACCCCTCATGCAACCAGTCATCCTGCTGTTC...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCACTCCACTGGTCCTACTaGAGGTTTCTGGAGAGTTCG +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSLHWSY*RFLESS
Trigger: CGAACTCTCCAGAAACCTCCAGTAGGACCAGTGGAG...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATGGGCTCATCAGGAGCTaGGGCGTCCACAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYGLIRS*GVHSPI
Trigger: GATGGGGCTGTGGACGCCCCAGCTCCTGATGAGCCC...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATTGCCGGGTGGAAACATaGGAGCGAGGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYCRVET*ERGGSG
Trigger: CCCACTGCCCCCTCGCTCCCATGTTTCCACCCGGCA...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAACAGTCCATGTGCCCTaGGAAAGATCACAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPITVHVP*ERSQAR
Trigger: GCGGGCCTGTGATCTTTCCCAGGGCACATGGACTGT...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTAAGGGGCTCAGCCCCTaGGATGGAAGAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFKGLSP*DGRGDT
Trigger: TGTGTCTCCTCTTCCATCCCAGGGGCTGAGCCCCTT...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652691.1
3UTR CAA 72 bp AGGAGAATTGTCAAAGAAATCACAGGGCAGATAAGTTaGGCCGATGGAGACTCAGCAGCCGTTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRIVKEITGQIS*ADGDSAAVSRN
Trigger: GTTCCTGGAAACGGCTGCTGAGTCTCCATCGGCCAAACTTATCTGCCCTGTGATTTCTTTGACAATTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGTGGGTGTCTGCACTaGTGTTGTGCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVGGCLH*CCAPQS
Trigger: GCTCTGGGGAGCACAACAGCAGTGCAGACACCCACC...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCGTAAAGGGGAACCAGTaGTGGCACCAATGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCVKGNQ*WHQWKS
Trigger: GGACTTCCATTGGTGCCAGCACTGGTTCCCCTTTAC...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGCAGGATGACTGGTTaGATGAGGGGTTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPISRMTG*MRGFLG
Trigger: CCCCAGGAAACCCCTCATGCAACCAGTCATCCTGCT...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCTCCAGAGAGACAGTTaGCATGGTAAGAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFLQRDS*HGKRGS
Trigger: GGACCCCCTCTTACCATGGCAACTGTCTCTCTGGAG...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTTCCGGAAGGGCACAGTaGTTGCGTTGGTGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVSGRAQ*LRWWRS
Trigger: CGACCTCCACCAACGCAAGCACTGTGCCCTTCCGGA...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATACAGCCACTGGCAGCATaGCTCGTGAGTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIQPLAA*LVSSHL
Trigger: CAGATGAGAACTCACGAGGCATGCTGCCAGTGGCTG...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTACTGAGATCGTGCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFTEIVH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGCACGATCTCAGT...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATACAGACGTTGAGAGGTaGCAGCCCTGCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYTDVER*QPCPAQ
Trigger: CTGGGCAGGGCAGGGCTGGCACCTCTCAACGTCTGT...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTAAACCCCTCTCCCCCTaGCTCTGTTCGCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVKPLSP*LCSQES
Trigger: GCTCTCCTGCGAACAGAGGCAGGGGGAGAGGGGTTT...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCACCATTTTCCTTGGTaGATTCATAACACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RRVYSFSPQTLRGASPALHHFPW*IHNTVC
Trigger: ACAAACAGTGTTATGAATGCACCAAGGAAAATGGTG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCACCTCAAAGTCTCCCTTaGCACAGTACACATGCATGG +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSPQSLP*HSTHAW
Trigger: CCATGCATGTGTACTGTGGCAAGGGAGACTTTGAGG...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR GCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCCAATGCGAGCCCTTCTaGTCAGCCACTGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCQCEPF*SATGIS
Trigger: AGAGATTCCAGTGGCTGAGCAGAAGGGCTCGCATTG...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCACTTGTTATTGAAGTaGTGTACATCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPHLLLK*CTSLSS
Trigger: TGAGCTCAAAGATGTACACCACTTCAATAACAAGTG...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCCTCCACTGGTCCTACTaGAGGTTTCTGGAGAGTTCG +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCLHWSY*RFLESS
Trigger: CGAACTCTCCAGAAACCTCCAGTAGGACCAGTGGAG...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAGATAAGTTTGGCCGATaGAGACTCAGCAGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSDKFGR*RLSSRF
Trigger: GAAACGGCTGCTGAGTCTCCATCGGCCAAACTTATC...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCTTCTGCTCAGCCACTaGAATCTCTTCCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELLLLSH*NLFLKV
Trigger: GACTTTGAGGAAGAGATTCCAGTGGCTGAGCAGAAG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCCTGGTCTCAAACTCCTaGCTTCAAGCAGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCLVSNS*LQAVLL
Trigger: CAGGAGGACTGCTTGAAGCCAGGAGTTTGAGACCAG...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCATAAACTCACCACTTTaGAGATCAGCATGGAAAACA +
Preference number: 4 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLINSPL*RSAWKT
Trigger: TGTTTTCCATGCTGATCTCCAAAGTGGTGAGTTTAT...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR TCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTTGGCAGCATGCCTCGTaGGTTCTCATCTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVWQHAS*VLIWVP
Trigger: CGGAACCCAGATGAGAACTCACGAGGCATGCTGCCA...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCAGTGCTGGCACCAATaGAAGTCCAAAGAGGGGATC +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFQCWHQ*KSKEGI
Trigger: GATCCCCTCTTTGGACTTCCATTGGTGCCAGCACTG...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCCTACTGGAGGTTTCTaGAGAGTTCGTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELPTGGF*RVRCYG
Trigger: ACCATAACAACGAACTCTCCAGAAACCTCCAGTAGG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCTCACTGGCCACCAGTaGCTCCTCCTCCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYLTGHQ*LLLPFE
Trigger: CTCAAAGGGGAGGAGGAGCCACTGGTGGCCAGTGAG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGGTCTCTAAGGGATTTTaGACATGGCCTCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELVSKGF*TWPLSF
Trigger: GAATGACAGAGGCCATGTCCAAAATCCCTTAGAGAC...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp GTACCCACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAATGCACCATTTTCCTTaGTGCATTCATAACACTGTT +
Preference number: 4 (lower is better)
Translates to: VPTTTPPKHRQILSSCTQMHHFP*CIHNTV
Trigger: AACAGTGTTATGAATGCACCAAGGAAAATGGTGCAT...TTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGTGGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAAGCTTCTCAAGTAGCTaGTACTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSSFSSS*YYRHAP
Trigger: TGGTGCATGCCTGTAGTACCAGCTACTTGAGAAGCT...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR TCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTAGGCACTGGGGTTTCTaGGAACTACACCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVRHWGF*ELHPAR
Trigger: TCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCT...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATAGAGCTAAAGGTGGTTaGGGGCTGCCCAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYRAKGG*GLPRFH
Trigger: GTGGAACCTGGGCAGCCCGCAACCACCTTTAGCTCT...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCAAGGAGCACACCACCATaGCTGGCTAACTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: CRNGDFKEGITMAELKNSRSTPP*LANFCI
Trigger: AATACAAAAGTTAGCCAGGCATGGTGGTGTGCTCCT...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATAAGGCTCTCCGGAGGTaGGTGTCTGCACTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYKALRR*VSALLL
Trigger: CAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTT...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAGAACAGCAGGATGACTaGTTGCATGAGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIEQQDD*LHEGFP
Trigger: AGGAAACCCCTCATGCAACCAGTCATCCTGCTGTTC...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTCCACTGTGCTCACCCTaGCATTCTGTATGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVPLCSP*HSVWGY
Trigger: GTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGG...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR TCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTAGTGGTGTACATCTTTaGGCTCAGGGGCTCGCTAGT +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVSGVHL*AQGLAS
Trigger: ACTAGCGAGCCCCTGAGCTCAAAGATGTACACCACT...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAGCACTGATGACATCTTaGTGGAAACTTCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIALMTS*WKLPGR
Trigger: CCTACCAGGAAGTTTCCATCAAGATGTCATCAGTGC...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTCCACCTGTCACGGTGTaGGATCCTAGAGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVPPVTV*DPREFA
Trigger: AGCAAACTCTCTAGGATCCCACACCGTGACAGGTGG...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAGAGAGTTCGTTGTTATaGTTCCACCTGTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIESSLL*FHLSRC
Trigger: ACACCGTGACAGGTGGAACCATAACAACGAACTCTC...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTCTCCACTGGTCCTACTaGAGGTTTCTGGAGAGTTCG +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVLHWSY*RFLESS
Trigger: CGAACTCTCCAGAAACCTCCAGTAGGACCAGTGGAG...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTCAGTGCTTGCGTTGGTaGAGGTCGTTGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVQCLRW*RSLETS
Trigger: TGATGTCTCCAACGACCTCCACCAACGCAAGCACTG...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATGCACAGTGCTTGCGTTaGTGGAGGTCGTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYAQCLR*WRSLET
Trigger: TGTCTCCAACGACCTCCACCAACGCAAGCACTGTGC...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR TCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCCATCAGAGCAAAGATaGCACGCACGTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYPSEQR*HARSQQ
Trigger: CTGCTGAGAACGTGCGTGTCATCTTTGCTCTGATGG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR TCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATTGGAGTGCAGTGGCATaGTCACAGCTCACTATAGCC +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYWSAVA*SQLTIA
Trigger: GGCTATAGTGAGCTGTGATCATGCCACTGCACTCCA...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGGAGCACACCACCATaGCTGGCTAACTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIRSTPP*LANFCI
Trigger: AATACAAAAGTTAGCCAGGCATGGTGGTGTGCTCCT...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATGGAGAAGGAGAAGCGTaGCCATTTCCAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYGEGEA*PFPGKQ
Trigger: CTGTTTGCCTGGAAATGGCCACGCTTCTCCTTCTCC...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCTACTGGAGGTTTCTaGAGAGTTCGTTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFPTGGF*RVRCYG
Trigger: ACCATAACAACGAACTCTCCAGAAACCTCCAGTAGG...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCAGTGCTTGCGTTGGTaGAGGTCGTTGGAGACATCA +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYQCLRW*RSLETS
Trigger: TGATGTCTCCAACGACCTCCACCAACGCAAGCACTG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGATGCACCATTTTCCTTaGTGCATTCATAACACTGTT +
Preference number: 4 (lower is better)
Translates to: QSWLRKQPYLSKEREVELMHHFP*CIHNTV
Trigger: AACAGTGTTATGAATGCACCAAGGAAAATGGTGCAT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCCTTTGGAGATCAGCATaGAAAACATTTGCGATGGGT +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCLWRSA*KTFAMG
Trigger: ACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAG...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR TCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGCACTGATGACATCTTaGTGGAAACTTCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVALMTS*WKLPGR
Trigger: CCTACCAGGAAGTTTCCATCAAGATGTCATCAGTGC...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR TCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTAGGGATTACCATGGCTaGGCTGAAGAACTCATATTT +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFRDYHG*AEELIF
Trigger: AAATATGAGTTCTTCAGCTCAGCCATGGTAATCCCT...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTGCTACAGGGCAAGGGTaGTTTACAAAGTTAATCCTA +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFATGQG*FTKLIL
Trigger: TAGGATTAACTTTGTAAAGCACCCTTGCCCTGTAGC...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTCCACCGCATAGCCACTaGACCCAACTATTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVPPHSH*TQLFSY
Trigger: GTAAGAAAATAGTTGGGTGCAGTGGCTATGCGGTGG...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATAAGGGGAACCAGTGCTaGCACCAATGGAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYKGNQC*HQWKSK
Trigger: TTTGGACTTCCATTGGTGCCAGCACTGGTTCCCCTT...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATGAGAGAGAGCGCACATaGATGTGTACTGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYERERT*MCTAEM
Trigger: CATTTCTGCAGTACACATGCATGTGCGCTCTCTCTC...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR GCA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATATCCAAGACGGAGTCTTaGTTCTGTCTCAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPISKTES*FCLKRK
Trigger: TTTTCTTTTGAGACAGAAGCAAGACTCCGTCTTGGA...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563039.2
CDS-3UTR CCA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATAAACTCACCACTTTaGAGATCAGCATGGAAAACA +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCINSPL*RSAWKT
Trigger: TGTTTTCCATGCTGATCTCCAAAGTGGTGAGTTTAT...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCACTTGTTATTGAAGTaGTGTACATCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFHLLLK*CTSLSS
Trigger: TGAGCTCAAAGATGTACACCACTTCAATAACAAGTG...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
3UTR CAA 72 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTaGTTTCCCTATAAGTGCATATATGGTTGGGAATTT +
Preference number: 4 (lower is better)
Translates to: WRSAWKTFAMGP*FPYKCIYGWEF
Trigger: AAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR GCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCCTGAGAGTTATGAATaGACCATTTTCCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYPESYE*TIFLGA
Trigger: TGCACCAAGGAAAATGGTGCATTCATAACTCTCAGG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATGGAAAACATTTGCGATaGGTCCTTTGTTTCCCTATA +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYGKHLR*VLCFPI
Trigger: TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCC...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CCA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCACTTGTTATTGAAGTaGTGTACATCTTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYHLLLK*CTSLSS
Trigger: TGAGCTCAAAGATGTACACCACTTCAATAACAAGTG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS GCA 90 bp CTGGCCCAGCCCAGGCGTCCACCACCCCGTTACGCTTGCCGCCTCTaGTCAGCACGAGGGCCCCAGTCCGCCGCTTCTGCCGCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: LAQPRRPPPRYACRL*SARGPQSAASAAGA
Trigger: GGCGCCGGCGGCAGAAGCGGCGGACTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGTGGACGCCTGGGCTGGGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 90 bp CGCTTGCCGCCTCTGCTCAGCACGAGGGCCCCAGTCCGCCGCTTCTaGCGCCGGCGCCACAGCAGGAGCAGAGCCACGAGGACTATGACC +
Preference number: 5 (lower is better)
Translates to: RLPPLLSTRAPVRRF*RRRHSRSRATRTMT
Trigger: GGTCATAGTCCTCGTGGCTCTGCTCCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS TCA 90 bp GCTTCTGCCGCCGGCGCCACAGCAGGAGCAGAGCCACGAGGACTATaGCCGCCAGCAGGGCCACAAGCACAGCCACTGGCAGCATGCCTC +
Preference number: 5 (lower is better)
Translates to: ASAAGATAGAEPRGL*PPAGPQAQPLAACL
Trigger: GAGGCATGCTGCCAGTGGCTGTGCTTGTGGCCCTGCTGGCGGTCATAGTCCTCGTGGCTCTGCTCCTGCTGTGGCGCCGGCGGCAGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAGGGAACCCAGAGCCCTaGTCGCCCCCGGACCCTCCC +
Preference number: 5 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPGNPEP*SPPDPP
Trigger: GGGAGGGTCCGGGGGCGACAAGGGCTCTGGGTTCCC...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS CCA 90 bp CAGGAGCAAGAGCTGGGACCGGCTCGGCTGATAAGGACGCAGCACTaGGGCCAGGTCACTCCACCACCTCCCGAGGCTGGGGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: QEQELGPARLIRTQH*GQVTPPPPEAGARL
Trigger: CAGTCTTGCCCCAGCCTCGGGAGGTGGTGGAGTGACCTGGCCCCAGTGCTGCGTCCTTATCAGCCGAGCCGGTCCCAGCTCTTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000436527.5
CDS-3UTR CAA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGGGGAACCCAGAGCCCTaGTCGCCCCCGGACCCTCCC +
Preference number: 5 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEGNPEP*SPPDPP
Trigger: GGGAGGGTCCGGGGGCGACAAGGGCTCTGGGTTCCC...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAACCACCCCGTTACGCTaGCCGCCTCTGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPTTPLR*PPLLST
Trigger: CGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGGAACCCAGAGCCCTaGTCGCCCCCGGACCCTCCC +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGNPEP*SPPDPP
Trigger: GGGAGGGTCCGGGGGCGACAAGGGCTCTGGGTTCCC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS TCA 90 bp GACCGCCAGCAGGGCCACAAGCACAGCCACTGGCAGCATGCCTCGTaGGTTCTCATCTGGGTTCCGGAAGGGCACAGTGCTTGCGTTGGT +
Preference number: 5 (lower is better)
Translates to: DRQQGHKHSHWQHAS*VLIWVPEGHSACVG
Trigger: ACCAACGCAAGCACTGTGCCCTTCCGGAACCCAGATGAGAACTCACGAGGCATGCTGCCAGTGGCTGTGCTTGTGGCCCTGCTGGCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 90 bp CTCGCTAGTAGAGACCAAAGGCTCTCCGGAGGTGGGTGTCTGCACTaGTGTTGTGCTCCCCAGAGCGTCTGGGCTTACCACCAGCACCCC +
Preference number: 5 (lower is better)
Translates to: LASRDQRLSGGGCLH*CCAPQSVWAYHQHP
Trigger: GGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTTTGGTCTCTACTAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 90 bp AGGGGCTCGCTAGTAGAGACCAAAGGCTCTCCGGAGGTGGGTGTCTaGACTGCTGTTGTGCTCCCCAGAGCGTCTGGGCTTACCACCAGC +
Preference number: 5 (lower is better)
Translates to: RGSLVETKGSPEVGV*TAVVLPRASGLTTS
Trigger: GCTGGTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTTTGGTCTCTACTAGCGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 90 bp TCCGGAGGTGGGTGTCTGCACTGCTGTTGTGCTCCCCAGAGCGTCTaGGCTTACCACCAGCACCCCAAGGAGAAGGAGAAGCGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SGGGCLHCCCAPQSV*AYHQHPKEKEKRGH
Trigger: ATGGCCACGCTTCTCCTTCTCCTTGGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCCACCTCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGCACAGTGCTTGCGTaGGTGGAGGTCGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGTVLA*VEVVGD
Trigger: GTCTCCAACGACCTCCACCAACGCAAGCACTGTGCC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGAAGGGCACAGTGCTaGCGTTGGTGGAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGRAQC*RWWRSL
Trigger: CAACGACCTCCACCAACGCAAGCACTGTGCCCTTCC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATTCAGTCCACAGACGTaGAGAGGTGCCAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPFSPQT*RGASPA
Trigger: GGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTGGCTCCTCCTCCCCTTaGAGGCTGGGGCCTGACCCA +
Preference number: 5 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPGSSSP*RLGPDP
Trigger: TGGGTCAGGCCCCAGCCTCAAAGGGGAGGAGGAGCC...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGCTCCTCCTCCCCTTaGAGGCTGGGGCCTGACCCA +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGSSSP*RLGPDP
Trigger: TGGGTCAGGCCCCAGCCTCAAAGGGGAGGAGGAGCC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTGGAAGGGCACAGTGCTaGCGTTGGTGGAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: PLCPREIPTALAHVCSWAGRAQC*RWWRSL
Trigger: CAACGACCTCCACCAACGCAAGCACTGTGCCCTTCC...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGGGAAGGGCACAGTGCTaGCGTTGGTGGAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCEGRAQC*RWWRSL
Trigger: CAACGACCTCCACCAACGCAAGCACTGTGCCCTTCC...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTTCCCCCATGCCCAGGTaGACCCTCTTCAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PLCPREIPTALAHVCSWASPMPR*TLFSLC
Trigger: GCAGAGACTGAAGAGGGTCAACCTGGGCATGGGGGA...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATCTCACTGGTTCCTCTaGGAGGATGGAAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPSHWFL*EDGRGS
Trigger: TGAGCCCCTTCCATCCTCCAAGAGGAACCAGTGAGA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATAGAGGGGATCCCTCATaGATGGAAGTTGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNRGDPS*MEVEGG
Trigger: ACCTCCCTCAACTTCCATCAATGAGGGATCCCCTCT...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCACTTCCTGGTAGGTTGTaGGCTCAGGTAAAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPLPGRL*AQVKGN
Trigger: GTTCCCCTTTACCTGAGCCAACAACCTACCAGGAAG...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACAGGCTCCTCCTCCCCTTaGAGGCTGGGGCCTGACCCA +
Preference number: 5 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTGSSSP*RLGPDP
Trigger: TGGGTCAGGCCCCAGCCTCAAAGGGGAGGAGGAGCC...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGTGTCTGCACTGCTGTaGTGCTCCCCAGAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALVSALL*CSPERL
Trigger: CAGACGCTCTGGGGAGCACAACAGCAGTGCAGACAC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGAGAGGGGATCCCTCATaGATGGAAGTTGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: QPETRRRNREASGCLCPWRGDPS*MEVEGG
Trigger: ACCTCCCTCAACTTCCATCAATGAGGGATCCCCTCT...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCAAAACTTCCTGGTAGGTaGTTGGCTCAGGTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPKLPGR*LAQVKG
Trigger: CCCCTTTACCTGAGCCAACAACCTACCAGGAAGTTT...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATGGGATCCTAGAGAGTTaGCTGTTATGGGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNGILES*LLWEQQ
Trigger: CTGCTGTTCCCATAACAGCAAACTCTCTAGGATCCC...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGCACAGTGCTTGCGTaGGTGGAGGTCGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGTVLA*VEVVGD
Trigger: GTCTCCAACGACCTCCACCAACGCAAGCACTGTGCC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGCACAGTGCTTGCGTaGGTGGAGGTCGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLGTVLA*VEVVGD
Trigger: GTCTCCAACGACCTCCACCAACGCAAGCACTGTGCC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp ACAACTACCCCTCCCAAGCATCGCCAAATCCTCAGCTCTTGCACACAAACCACAACCACCCCGTTACGCTaGCCGCCTCTGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: TTTPPKHRQILSSCTQTTTTPLR*PPLLST
Trigger: CGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGT...TGTGGTTTGTGTGCAAGAGCTGAGGATTTGGCGATGCTTGGGAGGGGTAGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGTTCAGTCCACAGACGTaGAGAGGTGCCAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALFSPQT*RGASPA
Trigger: GGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAA...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CCTCTTTGTCCTCGGGAAATACCAACTGCCCTGGCCCATGTGTGCTCCTGGGCTCGGGGTTTCATCATATaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PLCPREIPTALAHVCSWARGFII*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAATATGATGAAACCCCG...AGCCCAGGAGCACACATGGGCCAGGGCAGTTGGTATTTCCCGAGGACAAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGGCTGCCTCTGTCCATGGTCCTCAAAGTCTCCCTaGCCACAGTACACATGCATG +
Preference number: 5 (lower is better)
Translates to: QPETRRRNREASGCLCPWSSKSP*PQYTCM
Trigger: CATGCATGTGTACTGTGGCAAGGGAGACTTTGAGGA...CCATGGACAGAGGCAGCCAGAGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATCCATTTCTGGAGAGTTCGTaGTTATGGTTCCACCTGTCA +
Preference number: 5 (lower is better)
Translates to: PCPGASCGCWVRMAAGNPFLESS*LWFHLS
Trigger: TGACAGGTGGAACCATAACAACGAACTCTCCAGAAA...TGGATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGACCACCCCGTTACGCTaGCCGCCTCTGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: QSWLRKQPYLSKEREVELTTPLR*PPLLST
Trigger: CGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGT...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS CCA 90 bp TGGTTCCACCTGTCACGGTGTGGGATCCTAGAGAGTTTGCTGTTATaGGAACAGCAGGATGACTGGTTGCATGAGGGGTTTCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: WFHLSRCGILESLLL*EQQDDWLHEGFPGA
Trigger: TGCCCCAGGAAACCCCTCATGCAACCAGTCATCCTGCTGTTCCCATAACAGCAAACTCTCTAGGATCCCACACCGTGACAGGTGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTACAGGGCAGATAAGTTaGGCCGATGGAGACTCAGCA +
Preference number: 5 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPTGQIS*ADGDSA
Trigger: TGCTGAGTCTCCATCGGCCAAACTTATCTGCCCTGT...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGTTTGCCGGGTTCTCTaGTCCTTCTTCCCAGACTCT +
Preference number: 5 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLVCRVL*SFFPDS
Trigger: AGAGTCTGGGAAGAAGGACAAGAGAACCCGGCAAAC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp TTAAAGGCACCAGCCACTGTGCTCACCCTGGCATTCTGTATGGGGCTACAGACATCTCACTGGTTCCTCTaGGAGGATGGAAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LKAPATVLTLAFCMGLQTSHWFL*EDGRGS
Trigger: TGAGCCCCTTCCATCCTCCAAGAGGAACCAGTGAGA...TGTCTGTAGCCCCATACAGAATGCCAGGGTGAGCACAGTGGCTGGTGCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGCGGGGTTTCATCATATaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALRGFII*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAATATGATGAAACCCCG...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGGTGTCTGCACTGCTGTaGTGCTCCCCAGAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: QSWLRKQPYLSKEREVELVSALL*CSPERL
Trigger: CAGACGCTCTGGGGAGCACAACAGCAGTGCAGACAC...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGAAACTTCCTGGTAGGTaGTTGGCTCAGGTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALKLPGR*LAQVKG
Trigger: CCCCTTTACCTGAGCCAACAACCTACCAGGAAGTTT...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGGATCCTAGAGAGTTaGCTGTTATGGGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLGILES*LLWEQQ
Trigger: CTGCTGTTCCCATAACAGCAAACTCTCTAGGATCCC...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGGAGGGTTTATTCATTCAGTCCACAGACGTTGAGAGGTGCCAGCCCTGCCCTGGGGATCCTAGAGAGTTaGCTGTTATGGGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: RRVYSFSPQTLRGASPALGILES*LLWEQQ
Trigger: CTGCTGTTCCCATAACAGCAAACTCTCTAGGATCCC...CAGGGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAATGAATAAACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAACCCAGAGCCCTaGTCGCCCCCGGACCCTCCC +
Preference number: 5 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVGNPEP*SPPDPP
Trigger: GGGAGGGTCCGGGGGCGACAAGGGCTCTGGGTTCCC...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCTTCAGTCCACAGACGTaGAGAGGTGCCAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSFSPQT*RGASPA
Trigger: GGCAGGGCTGGCACCTCTCAACGTCTGTGGACTGAA...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CTGCCCTGCCCAGGCGCTAGTTGTGGGTGCTGGGTGAGGATGGCAGCAGGAAATTTGAAAATTTCCTCTTaGTCCTCGGGAAATACCAAC +
Preference number: 5 (lower is better)
Translates to: LPCPGASCGCWVRMAAGNLKISS*SSGNTN
Trigger: GTTGGTATTTCCCGAGGACAAAGAGGAAATTTTCAA...ATTTCCTGCTGCCATCCTCACCCAGCACCCACAACTAGCGCCTGGGCAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCTCCTCAAAGTCTCCCTaGCCACAGTACACATGCATG +
Preference number: 5 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLSSKSP*PQYTCM
Trigger: CATGCATGTGTACTGTGGCAAGGGAGACTTTGAGGA...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS CCA 90 bp GGGCTCCACTGGTCCTACTGGAGGTTTCTGGAGAGTTCGTTGTTATaGTTCCACCTGTCACGGTGTGGGATCCTAGAGAGTTTGCTGTTA +
Preference number: 5 (lower is better)
Translates to: GLHWSYWRFLESSLL*FHLSRCGILESLLL
Trigger: TAACAGCAAACTCTCTAGGATCCCACACCGTGACAGGTGGAACCATAACAACGAACTCTCCAGAAACCTCCAGTAGGACCAGTGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCTTCCTGGTAGGTTGTaGGCTCAGGTAAAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPLPGRL*AQVKGN
Trigger: GTTCCCCTTTACCTGAGCCAACAACCTACCAGGAAG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AGTGGACACACGCAGGCACTGGGGTTTCTGAGAACTACACCCAGCCAGAAACTCTTTCTGGAGAGTTCGTaGTTATGGTTCCACCTGTCA +
Preference number: 5 (lower is better)
Translates to: SGHTQALGFLRTTPSQKLFLESS*LWFHLS
Trigger: TGACAGGTGGAACCATAACAACGAACTCTCCAGAAA...GAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCCCAGTGCCTGCGTGTGTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCGGCACAGTGCTTGCGTaGGTGGAGGTCGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCGTVLA*VEVVGD
Trigger: GTCTCCAACGACCTCCACCAACGCAAGCACTGTGCC...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGCTCCTCCTCCCCTTaGAGGCTGGGGCCTGACCCA +
Preference number: 5 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVGSSSP*RLGPDP
Trigger: TGGGTCAGGCCCCAGCCTCAAAGGGGAGGAGGAGCC...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGTCAAAGGCAGCACCATaGAGTTCTCCCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: QSWLRKQPYLSKEREVELSKAAP*SSPLST
Trigger: GGTGGAGAGGGGAGAACTCAATGGTGCTGCCTTTGA...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp GCCACGACACACTCTCAGGTGAAGCCTTCCAACCTTTCGCCAGGGCAATGCGAGTTGAAAATTTCCTCTTaGTCCTCGGGAAATACCAAC +
Preference number: 5 (lower is better)
Translates to: ATTHSQVKPSNLSPGQCELKISS*SSGNTN
Trigger: GTTGGTATTTCCCGAGGACAAAGAGGAAATTTTCAA...CTCGCATTGCCCTGGCGAAAGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTGTGTCTGCACTGCTGTaGTGCTCCCCAGAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFVSALL*CSPERL
Trigger: CAGACGCTCTGGGGAGCACAACAGCAGTGCAGACAC...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAGGAAGGGCACAGTGCTaGCGTTGGTGGAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIGRAQC*RWWRSL
Trigger: CAACGACCTCCACCAACGCAAGCACTGTGCCCTTCC...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCGTTTGCCGGGTTCTCTaGTCCTTCTTCCCAGACTCT +
Preference number: 5 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSVCRVL*SFFPDS
Trigger: AGAGTCTGGGAAGAAGGACAAGAGAACCCGGCAAAC...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCATCCTAGGAGGGAGTTaGCCGGGTTCTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSILGGS*PGSLVL
Trigger: AAGGACAAGAGAACCCGGCAAACTCCCTCCTAGGAT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCATTGTGAAAGCCCTGTaGGGTGCCTTCCTTACCCGT +
Preference number: 5 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSIVKAL*GAFLTR
Trigger: ACGGGTAAGGAAGGCACCCAACAGGGCTTTCACAAT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp TGCAGAAATGGAGACTTCAAGGAAGGGATTACCATGGCTGAGCTGAAGAACTCACTTCCTGGTAGGTTGTaGGCTCAGGTAAAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: CRNGDFKEGITMAELKNSLPGRL*AQVKGN
Trigger: GTTCCCCTTTACCTGAGCCAACAACCTACCAGGAAG...TGAGTTCTTCAGCTCAGCCATGGTAATCCCTTCCTTGAAGTCTCCATTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCAAACTTCCTGGTAGGTaGTTGGCTCAGGTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSKLPGR*LAQVKG
Trigger: CCCCTTTACCTGAGCCAACAACCTACCAGGAAGTTT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATACCACCCCGTTACGCTaGCCGCCTCTGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYTTPLR*PPLLST
Trigger: CGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGT...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp GGGTTTCTGAGAACTACACCCAGCCAGAAACTCGGAGGAGAAACCGTGAGGCCTCTGAAGAACTCATATTaGGGTCACACATACGATCTT +
Preference number: 5 (lower is better)
Translates to: GFLRTTPSQKLGGETVRPLKNSY*GHTYDL
Trigger: AAGATCGTATGTGTGACCCAAATATGAGTTCTTCAG...AGGCCTCACGGTTTCTCCTCCGAGTTTCTGGCTGGGTGTAGTTCTCAGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTTCCCCCATGCCCAGGTaGACCCTCTTCAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVSPMPR*TLFSLC
Trigger: GCAGAGACTGAAGAGGGTCAACCTGGGCATGGGGGA...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CAA 90 bp ACACACGCATGGCTTGGTAGGCTTCACCTGAGAGTTATGAATGCACCATTTTCCATTAAAAGACATCTATaGTCGGGCACGGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: THAWLGRLHLRVMNAPFSIKRHL*SGTVAH
Trigger: GTGAGCCACCGTGCCCGACAATAGATGTCTTTTAAT...GGAAAATGGTGCATTCATAACTCTCAGGTGAAGCCTACCAAGCCATGCGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCTTCCTGGTAGGTTGTaGGCTCAGGTAAAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFLPGRL*AQVKGN
Trigger: GTTCCCCTTTACCTGAGCCAACAACCTACCAGGAAG...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAATCCTAGGAGGGAGTTaGCCGGGTTCTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: HFGDQHGKHLRWVLCFPIILGGS*PGSLVL
Trigger: AAGGACAAGAGAACCCGGCAAACTCCCTCCTAGGAT...TATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CAA 90 bp AGCAGTGGATATGACAAAGGCCACGACACACTCTCAGGTGAAGCCTTCCAACCTCGCCCAGCTAATTTTTaGTATTTTGAAACAGGGTTT +
Preference number: 5 (lower is better)
Translates to: SSGYDKGHDTLSGEAFQPRPANF*YFETGF
Trigger: AAACCCTGTTTCAAAATACAAAAAATTAGCTGGGCG...AGGTTGGAAGGCTTCACCTGAGAGTGTGTCGTGGCCTTTGTCATATCCACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp CAGTCCTGGCTTAGAAAACAACCATATCTGTCAAAGGAAAGGGAGGTGGAGCTGCTGAAGAACTCATATTaGGGTCACACATACGATCTT +
Preference number: 5 (lower is better)
Translates to: QSWLRKQPYLSKEREVELLKNSY*GHTYDL
Trigger: AAGATCGTATGTGTGACCCAAATATGAGTTCTTCAG...CAGCTCCACCTCCCTTTCCTTTGACAGATATGGTTGTTTTCTAAGCCAGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360121.4
ENST00000652691.1
CDS-3UTR CAA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATTCAAAGGCAGCACCATaGAGTTCTCCCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYSKAAP*SSPLST
Trigger: GGTGGAGAGGGGAGAACTCAATGGTGCTGCCTTTGA...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CAA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTATTGTGAAAGCCCTGTaGGGTGCCTTCCTTACCCGT +
Preference number: 5 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVIVKAL*GAFLTR
Trigger: ACGGGTAAGGAAGGCACCCAACAGGGCTTTCACAAT...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS-3UTR CAA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTAAACTTCCTGGTAGGTaGTTGGCTCAGGTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVKLPGR*LAQVKG
Trigger: CCCCTTTACCTGAGCCAACAACCTACCAGGAAGTTT...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGATCCTAGAGAGTTaGCTGTTATGGGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVGILES*LLWEQQ
Trigger: CTGCTGTTCCCATAACAGCAAACTCTCTAGGATCCC...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp AACTCACCACTTTGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTTTTCTGGAGAGTTCGTaGTTATGGTTCCACCTGTCA +
Preference number: 5 (lower is better)
Translates to: NSPLWRSAWKTFAMGPLFFLESS*LWFHLS
Trigger: TGACAGGTGGAACCATAACAACGAACTCTCCAGAAA...AAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCAAAGTGGTGAGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp TGGAGATCAGCATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCTTTGCGATGGGTCCTTaGTTTCCCTATAAGTGCATA +
Preference number: 5 (lower is better)
Translates to: WRSAWKTFAMGPLFPYKCFAMGP*FPYKCI
Trigger: TATGCACTTATAGGGAAACAAAGGACCCATCGCAAA...GCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATGCTGATCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563039.2
ENST00000652691.1
CDS-3UTR CAA 90 bp CATGGAAAACATTTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTTTCCAAGACGGAGTCTaGCTTCTGTCTCAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: HGKHLRWVLCFPISAYMVFQDGV*LLSQKK
Trigger: TTTCTTTTGAGACAGAAGCAAGACTCCGTCTTGGAA...AACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAAATGTTTTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563039.2
CDS-3UTR CAA 90 bp TTGCGATGGGTCCTTTGTTTCCCTATAAGTGCATATATGGTTGGGAATTTTTATCGCCCAGCTAATTTTTaGTATTTTGAAACAGGGTTT +
Preference number: 5 (lower is better)
Translates to: LRWVLCFPISAYMVGNFYRPANF*YFETGF
Trigger: AAACCCTGTTTCAAAATACAAAAAATTAGCTGGGCG...ATAAAAATTCCCAACCATATATGCACTTATAGGGAAACAAAGGACCCATCGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652691.1
CDS GCA 72 bp CCTCTGCTCAGCACGAGGGCCCCAGTCCGCCGCTTCTaGCGCCGGCGCCACAGCAGGAGCAGAGCCACGAGG +
Preference number: 6 (lower is better)
Translates to: PLLSTRAPVRRF*RRRHSRSRATR
Trigger: CCTCGTGGCTCTGCTCCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGGGGCCCTCGTGCTGAGCAGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 72 bp CTGGCCCAGCCCAGGCGTCCACCACCCCGTTACGCTTaGCGCCTCTGCTCAGCACGAGGGCCCCAGTCCGCC +
Preference number: 6 (lower is better)
Translates to: LAQPRRPPPRYA*RLCSARGPQSA
Trigger: GGCGGACTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGTGGACGCCTGGGCTGGGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CAA 72 bp GCTGGCCCAGCCCAGGCGTCCACCACCCCGTTACGCTaGCCGCCTCTGCTCAGCACGAGGGCCCCAGTCCGC +
Preference number: 6 (lower is better)
Translates to: AGPAQASTTPLR*PPLLSTRAPVR
Trigger: GCGGACTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGTGGACGCCTGGGCTGGGCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 72 bp CCCAGGCGTCCACCACCCCGTTACGCTTGCCGCCTCTaGTCAGCACGAGGGCCCCAGTCCGCCGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: PRRPPPRYACRL*SARGPQSAASA
Trigger: GGCAGAAGCGGCGGACTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGTGGACGCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 72 bp GAGCTGGGACCGGCTCGGCTGATAAGGACGCAGCACTaGGGCCAGGTCACTCCACCACCTCCCGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ELGPARLIRTQH*GQVTPPPPEAG
Trigger: CCCAGCCTCGGGAGGTGGTGGAGTGACCTGGCCCCAGTGCTGCGTCCTTATCAGCCGAGCCGGTCCCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360121.4
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS TCA 72 bp GCCGGCGCCACAGCAGGAGCAGAGCCACGAGGACTATaGCCGCCAGCAGGGCCACAAGCACAGCCACTGGCA +
Preference number: 6 (lower is better)
Translates to: AGATAGAEPRGL*PPAGPQAQPLA
Trigger: TGCCAGTGGCTGTGCTTGTGGCCCTGCTGGCGGTCATAGTCCTCGTGGCTCTGCTCCTGCTGTGGCGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 72 bp AAGGCTCTCCGGAGGTGGGTGTCTGCACTGCTGTTGTaGTCCCCAGAGCGTCTGGGCTTACCACCAGCACCC +
Preference number: 6 (lower is better)
Translates to: KALRRWVSALLL*SPERLGLPPAP
Trigger: GGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CAA 72 bp CCAAAGGCTCTCCGGAGGTGGGTGTCTGCACTGCTGTaGTGCTCCCCAGAGCGTCTGGGCTTACCACCAGCA +
Preference number: 6 (lower is better)
Translates to: PKALRRWVSALL*CSPERLGLPPA
Trigger: TGCTGGTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 72 bp AGAGACCAAAGGCTCTCCGGAGGTGGGTGTCTGCACTaGTGTTGTGCTCCCCAGAGCGTCTGGGCTTACCAC +
Preference number: 6 (lower is better)
Translates to: RDQRLSGGGCLH*CCAPQSVWAYH
Trigger: GTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTTTGGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 72 bp GGGTGTCTGCACTGCTGTTGTGCTCCCCAGAGCGTCTaGGCTTACCACCAGCACCCCAAGGAGAAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: GCLHCCCAPQSV*AYHQHPKEKEK
Trigger: CTTCTCCTTCTCCTTGGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 72 bp CTAGTAGAGACCAAAGGCTCTCCGGAGGTGGGTGTCTaGACTGCTGTTGTGCTCCCCAGAGCGTCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: LVETKGSPEVGV*TAVVLPRASGL
Trigger: AAGCCCAGACGCTCTGGGGAGCACAACAGCAGTGCAGACACCCACCTCCGGAGAGCCTTTGGTCTCTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CAA 90 bp GAACCAGTGCTGGCACCAATGGAAGTCCAAAGAGGGGATCCCTCATaGATGGAAGTTGAGGGAGGTAGGGCTGAGGTCTGGTCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: EPVLAPMEVQRGDPS*MEVEGGRAEVWSPV
Trigger: CACTGGGGACCAGACCTCAGCCCTACCTCCCTCAACTTCCATCAATGAGGGATCCCCTCTTTGGACTTCCATTGGTGCCAGCACTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 72 bp GGAGACATCATTGTAGATAGTTTTACGCTAGAGACCTaGGGTCCACTGGCCCCGCTGGAGGGCTCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: GDIIVDSFTLET*GPLAPLEGSRE
Trigger: CTCTCTGGAGCCCTCCAGCGGGGCCAGTGGACCCCAGGTCTCTAGCGTAAAACTATCTACAATGATGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS GCA 72 bp CTCGTGAGTTCTCATCTGGGTTCCGGAAGGGCACAGTaGTTGCGTTGGTGGAGGTCGTTGGAGACATCATTG +
Preference number: 6 (lower is better)
Translates to: LVSSHLGSGRAQ*LRWWRSLETSL
Trigger: CAATGATGTCTCCAACGACCTCCACCAACGCAAGCACTGTGCCCTTCCGGAACCCAGATGAGAACTCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 72 bp GAGGCAGGGAAGCGTGGGATCTGGAATCAGGATTCCTaGCTCTTGGCTGAGGAATGGGATGGAAGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: EAGKRGIWNQDS*LLAEEWDGSGD
Trigger: ATCACCACTTCCATCCCATTCCTCAGCCAAGAGCCAGGAATCCTGATTCCAGATCCCACGCTTCCCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395389.2
CDS CAA 72 bp CTGGCACCAATGGAAGTCCAAAGAGGGGATCCCTCATaGATGGAAGTTGAGGGAGGTAGGGCTGAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: LAPMEVQRGDPS*MEVEGGRAEVW
Trigger: CCAGACCTCAGCCCTACCTCCCTCAACTTCCATCAATGAGGGATCCCCTCTTTGGACTTCCATTGGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 72 bp GGTAGGTTGTTGGCTCAGGTAAAGGGGAACCAGTGCTaGCACCAATGGAAGTCCAAAGAGGGGATCCCTCAT +
Preference number: 6 (lower is better)
Translates to: GRLLAQVKGNQC*HQWKSKEGIPH
Trigger: ATGAGGGATCCCCTCTTTGGACTTCCATTGGTGCCAGCACTGGTTCCCCTTTACCTGAGCCAACAACCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CAA 72 bp CTCCACTGGTCCTACTGGAGGTTTCTGGAGAGTTCGTaGTTATGGTTCCACCTGTCACGGTGTGGGATCCTA +
Preference number: 6 (lower is better)
Translates to: LHWSYWRFLESS*LWFHLSRCGIL
Trigger: TAGGATCCCACACCGTGACAGGTGGAACCATAACAACGAACTCTCCAGAAACCTCCAGTAGGACCAGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CAA 90 bp CCTCGTGAGTTCTCATCTGGGTTCCGGAAGGGCACAGTGCTTGCGTaGGTGGAGGTCGTTGGAGACATCATTGTAGATAGTTTTACGCTA +
Preference number: 6 (lower is better)
Translates to: PREFSSGFRKGTVLA*VEVVGDIIVDSFTL
Trigger: TAGCGTAAAACTATCTACAATGATGTCTCCAACGACCTCCACCAACGCAAGCACTGTGCCCTTCCGGAACCCAGATGAGAACTCACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 72 bp TGGTCCTACTGGAGGTTTCTGGAGAGTTCGTTGTTATaGTTCCACCTGTCACGGTGTGGGATCCTAGAGAGT +
Preference number: 6 (lower is better)
Translates to: WSYWRFLESSLL*FHLSRCGILES
Trigger: ACTCTCTAGGATCCCACACCGTGACAGGTGGAACCATAACAACGAACTCTCCAGAAACCTCCAGTAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CAA 72 bp TGGTTCCACCTGTCACGGTGTGGGATCCTAGAGAGTTaGCTGTTATGGGAACAGCAGGATGACTGGTTGCAT +
Preference number: 6 (lower is better)
Translates to: WFHLSRCGILES*LLWEQQDDWLH
Trigger: ATGCAACCAGTCATCCTGCTGTTCCCATAACAGCAAACTCTCTAGGATCCCACACCGTGACAGGTGGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CAA 90 bp TCGTTGTTATGGTTCCACCTGTCACGGTGTGGGATCCTAGAGAGTTaGCTGTTATGGGAACAGCAGGATGACTGGTTGCATGAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: SLLWFHLSRCGILES*LLWEQQDDWLHEGF
Trigger: AAACCCCTCATGCAACCAGTCATCCTGCTGTTCCCATAACAGCAAACTCTCTAGGATCCCACACCGTGACAGGTGGAACCATAACAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS TCA 72 bp TTGCATGAGGGGTTTCCTGGGGCACTGATGACATCTTaGTGGAAACTTCCTGGTAGGTTGTTGGCTCAGGTA +
Preference number: 6 (lower is better)
Translates to: LHEGFPGALMTS*WKLPGRLLAQV
Trigger: TACCTGAGCCAACAACCTACCAGGAAGTTTCCATCAAGATGTCATCAGTGCCCCAGGAAACCCCTCATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1
CDS CCA 72 bp GGAGAGTTCGTTGTTATGGTTCCACCTGTCACGGTGTaGGATCCTAGAGAGTTTGCTGTTATGGGAACAGCA +
Preference number: 6 (lower is better)
Translates to: GEFVVMVPPVTV*DPREFAVMGTA
Trigger: TGCTGTTCCCATAACAGCAAACTCTCTAGGATCCCACACCGTGACAGGTGGAACCATAACAACGAACTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360121.4
ENST00000395389.2
ENST00000436527.5
ENST00000563039.2
ENST00000652691.1