RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPIRE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000204991

Ensembl transcript IDs: ENST00000378247.8, ENST00000393062.6, ENST00000561883.1, ENST00000562029.5, ENST00000563972.1, ENST00000564878.5, ENST00000565103.1, ENST00000565628.1, ENST00000566337.5, ENST00000569108.5

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTCTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGCGCCTGTaGGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCGCATGGC +
Preference number: 1 (lower is better)
Translates to: RLHEERAAHGLVMRL*APGVGQPRRAQPHG
Trigger: GCCATGCGGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAGACG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 90 bp CACGCGGGGCCGCGGGCGCTGGGCGCTGCCCCCAGCATCTGTGACTaGCAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGC +
Preference number: 1 (lower is better)
Translates to: HAGPRALGAAPSICD*QVDAGGGLGISGAG
Trigger: GCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGCTGGGGGCAGCGCCCAGCGCCCGCGGCCCCGCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 90 bp CGCGCTCCTCGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCACGGTCTGGGCTTCCGAGCTGGCTA +
Preference number: 1 (lower is better)
Translates to: RAPRSRPAPSPARGR*RSRGTARSGLPSWL
Trigger: TAGCCAGCTCGGAAGCCCAGACCGTGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCGAGGAGCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 90 bp CCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTaGGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACAC +
Preference number: 1 (lower is better)
Translates to: PGPPSIFRSLWARGE*GQHQNVVGPGEAGH
Trigger: GTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR TCA 90 bp TCCTCGCTGTCGTTGTTGGCCATGAGGTCGATGAGCCGCTCCAGCTaGGGGCTGAGTTCGCGCTCCTCGCTCTCGTCCAGCCCCCAGTCC +
Preference number: 1 (lower is better)
Translates to: SSLSLLAMRSMSRSS*GLSSRSSLSSSPQS
Trigger: GGACTGGGGGCTGGACGAGAGCGAGGAGCGCGAACTCAGCCCTCAGCTGGAGCGGCTCATCGACCTCATGGCCAACAACGACAGCGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 90 bp AACCCACAGTCGGGCCCAGTCTGTGTGACCCAGGCTGTCCAGCTCTaGCCGAGGCGTCTCCAGATGCGGCTCGTCCTCCCGAAGCTTCTG +
Preference number: 1 (lower is better)
Translates to: NPQSGPVCVTQAVQL*PRRLQMRLVLPKLL
Trigger: CAGAAGCTTCGGGAGGACGAGCCGCATCTGGAGACGCCTCGGGCAGAGCTGGACAGCCTGGGTCACACAGACTGGGCCCGACTGTGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 90 bp TCGAAGGGCGTGAGCTGGAACTCGGTGGGGAGGGGGTTGAACTCCTaGTCTTGCACCTTCTTCAGCTTCACTCCGCGGCGGAGCTCCCGC +
Preference number: 1 (lower is better)
Translates to: SKGVSWNSVGRGLNS*SCTFFSFTPRRSSR
Trigger: GCGGGAGCTCCGCCGCGGAGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGAGTTCCAGCTCACGCCCTTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 90 bp GTTGCAGGTTCTGGAGACAGTGGAGGAGGATCTGGAGGTGGGTTGTaGGCACTCCCTCAGATTCTCGGCCCCCGGTCCGCTGCAGTCGGC +
Preference number: 1 (lower is better)
Translates to: VAGSGDSGGGSGGGL*ALPQILGPRSAAVG
Trigger: GCCGACTGCAGCGGACCGGGGGCCGAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGATCCTCCTCCACTGTCTCCAGAACCTGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 90 bp GCTCTTGCACCTTCTTCAGCTTCACTCCGCGGCGGAGCTCCCGCATaGGCTGAACCCACAGTCGGGCCCAGTCTGTGTGACCCAGGCTGT +
Preference number: 1 (lower is better)
Translates to: ALAPSSASLRGGAPA*AEPTVGPSLCDPGC
Trigger: ACAGCCTGGGTCACACAGACTGGGCCCGACTGTGGGTTCAGCTCATGCGGGAGCTCCGCCGCGGAGTGAAGCTGAAGAAGGTGCAAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 90 bp CCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTaGCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCG +
Preference number: 1 (lower is better)
Translates to: PRVAMCTDLQSCSSL*QDRPASSGASGPGA
Trigger: CGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CCA 90 bp GACCATGGTTGCAGGTTCTGGAGACAGTGGAGGAGGATCTGGAGGTaGGTTGTGGGCACTCCCTCAGATTCTCGGCCCCCGGTCCGCTGC +
Preference number: 1 (lower is better)
Translates to: DHGCRFWRQWRRIWR*VVGTPSDSRPPVRC
Trigger: GCAGCGGACCGGGGGCCGAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGATCCTCCTCCACTGTCTCCAGAACCTGCAACCATGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 90 bp GGTCACCAGGCTGATTTTTCCTGTTTGCACCTGAAGTCGTCTCCCTaGCCCCGGCTCTGTGTCTGGGAGGCCGGCCCTGCAGACGTCAGC +
Preference number: 1 (lower is better)
Translates to: GHQADFSCLHLKSSP*PRLCVWEAGPADVS
Trigger: GCTGACGTCTGCAGGGCCGGCCTCCCAGACACAGAGCCGGGGTCAGGGAGACGACTTCAGGTGCAAACAGGAAAAATCAGCCTGGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR TCA 90 bp TGCTTCAGTGGAGGCCGTGAGCGGATAAAGTCCAGGATGAGCTCGTaGGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCATCCACCATG +
Preference number: 1 (lower is better)
Translates to: CFSGGRERIKSRMSS*ASFFTRGGMSPSTM
Trigger: CATGGTGGATGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAGCTCATCCTGGACTTTATCCGCTCACGGCCTCCACTGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 90 bp CGCTCCTGCTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTaGTTTGGTGGCAACGGGCGCAGCCGCCTCTCAGAGACCTGCTTC +
Preference number: 1 (lower is better)
Translates to: RSCLISSRIFSCRDL*FGGNGRSRLSETCF
Trigger: GAAGCAGGTCTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 90 bp CCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTaGGGACGGAGAAGAGCATGGGAACATGGGATGCAGTCTGTGCCA +
Preference number: 1 (lower is better)
Translates to: PPRRPLGKGNCRSHS*GRRRAWEHGMQSVP
Trigger: TGGCACAGACTGCATCCCATGTTCCCATGCTCTTCTCCGTCCCCAGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CCA 90 bp CTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTGGTaGCAACGGGCGCAGCCGCCTCTCAGAGACCTGCTTCAGTGGAGG +
Preference number: 1 (lower is better)
Translates to: LDLLQDLLMQGPLLW*QRAQPPLRDLLQWR
Trigger: CCTCCACTGAAGCAGGTCTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 90 bp CTGCTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTaGTGGCAACGGGCGCAGCCGCCTCTCAGAGACCTGCTTCAGTGG +
Preference number: 1 (lower is better)
Translates to: LLDLLQDLLMQGPLL*WQRAQPPLRDLLQW
Trigger: CCACTGAAGCAGGTCTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 90 bp TCCTTTATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTaGTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCT +
Preference number: 1 (lower is better)
Translates to: SFIRPRVAMCTDLQS*SSLCQDRPASSGAS
Trigger: AGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAATAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR GCA 90 bp GCATGGGAACATGGGATGCAGTCTGTGCCAGGATCTAGAACCTTCTaGTTTCTCTCTTCAGTGAGAAAACCCACCCTGTTCCCTCCCCTT +
Preference number: 1 (lower is better)
Translates to: AWEHGMQSVPGSRTF*FLSSVRKPTLFPPL
Trigger: AAGGGGAGGGAACAGGGTGGGTTTTCTCACTGAAGAGAGAAAGCAGAAGGTTCTAGATCCTGGCACAGACTGCATCCCATGTTCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR TCA 90 bp GCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGCTCCAGCTGAGGGCTaGGTTCGCGCTCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: AHGLVMRLCAPGVGQPRRAPAEG*VRAPRS
Trigger: AGAGCGAGGAGCGCGAACTCAGCCCTCAGCTGGAGC...GCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR GCA 90 bp TGGCCAGGAAGGCCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGCTGGTAATGCGCCTGTaGGCCCCGGGGGTCGGTCAG +
Preference number: 2 (lower is better)
Translates to: WPGRPAAPASPRRARGTRLVMRL*APGVGQ
Trigger: CTGACCGACCCCCGGGGCGCACAGGCGCATTACCAG...CCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCCTTCCTGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp TGGCCAGGAAGGCCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGCCGCGCACAGCCGCATaGCCTGGGCAAAGGTGCGCA +
Preference number: 2 (lower is better)
Translates to: WPGRPAAPASPRRARGTRPRTAA*PGQRCA
Trigger: TGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGG...CCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCCTTCCTGGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR GCA 90 bp TGGCCAGGAAGGCCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGGCGAAGCCGAGGGACTaGACGGTCTGGGCTTCCGAG +
Preference number: 2 (lower is better)
Translates to: WPGRPAAPASPRRARGTRAKPRD*TVWASE
Trigger: CTCGGAAGCCCAGACCGTGCAGTCCCTCGGCTTCGC...CCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCCTTCCTGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR GCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCTGGGAGGCCGGCCCTaGAGACGTCAGCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRLGGRP*RRQLCP
Trigger: GGGGCACAGCTGACGTCTGCAGGGCCGGCCTCCCAG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCCCCGGCTCTGTGTCTaGGAGGCCGGCCCTGCAGAC +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRPRLCV*EAGPAD
Trigger: GTCTGCAGGGCCGGCCTCCCAGACACAGAGCCGGGG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CCA 90 bp GCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGAGAGGAGCTTACAGTaGCAGTTGAGGGTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: AHGLVMRLCAPGVGQPRRERSLQ*QLRVQV
Trigger: CACCTGGACCCTCAACTGCCACTGTAAGCTCCTCTC...GCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp ATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCGCATGGCCATGGTTGCAGGTTCTaGAGACAGTGGAGGAGGATC +
Preference number: 2 (lower is better)
Translates to: MRLCAPGVGQPRRAQPHGHGCRF*RQWRRI
Trigger: GATCCTCCTCCACTGTCTCCAGAACCTGCAACCATG...GCCATGCGGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CAA 90 bp GGCCGCGGGCGCTGGGCGCTGCCCCCAGCATCTGTGACTGACAGGTaGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGAGG +
Preference number: 2 (lower is better)
Translates to: GRGRWALPPASVTDR*MQEVDLASPEQALR
Trigger: CCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGCTGGGGGCAGCGCCCAGCGCCCGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp CTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGAGGAGGATCTGGAGGTaGGTTGTGGGCACTCCCTCA +
Preference number: 2 (lower is better)
Translates to: LHEERAAHGLVMRLCAPGRRIWR*VVGTPS
Trigger: TGAGGGAGTGCCCACAACCCACCTCCAGATCCTCCT...CCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGGCCCTGCCCTGCGGTaGGGTTCCAGTTTTGGTCGG +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRGPALR*GSSFGR
Trigger: CCGACCAAAACTGGAACCTCACCGCAGGGCAGGGCC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR CAA 90 bp GACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTaGAGGATGCAGGGCAGAGAGCCAAACCCGCGGGCAGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: DRLMQEVDLASPEQA*RMQGREPNPRAAQP
Trigger: GGGCTGGGCTGCCCGCGGGTTTGGCTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCTGAAGTCGTCTCCCTaGCCCCGGCTCTGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRLKSSP*PRLCVW
Trigger: CCAGACACAGAGCCGGGGTCAGGGAGACGACTTCAG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGGCAGGAGAAAGGTGTaGACCCGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRGRRKV*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCACACCTTTCTCCTGCC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR TCA 90 bp CTGCCCGAGGCGTCTCCAGATGCGGCTCGTCCTCCCGAAGCTTCTGCAGCATCTATGAGCCGCTCCAGCTaGGGGCTGAGTTCGCGCTCC +
Preference number: 2 (lower is better)
Translates to: LPEASPDAARPPEASAASMSRSS*GLSSRS
Trigger: GGAGCGCGAACTCAGCCCTCAGCTGGAGCGGCTCAT...AGATGCTGCAGAAGCTTCGGGAGGACGAGCCGCATCTGGAGACGCCTCGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp CAGGATGAGCTCGTGAGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCATCCACCCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCA +
Preference number: 2 (lower is better)
Translates to: QDELVSVLLHPGRDVPIHPARGR*RSRGTA
Trigger: TGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGG...GTGGATGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAGCTCATCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCCAGTTTTGGTCGGGTaGGGTTTCGGGGCACTGGTC +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRPVLVG*GFGALV
Trigger: GACCAGTGCCCCGAAACCCCACCCGACCAAAACTGG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CCA 90 bp GGCGGCACCGCAGCCGCTGTCCTCGCTGTCGTTGTTGGCCATGAGGTCGATGAGTCTGGGCTTCCGAGCTaGCTAGTGGCACGACCATGG +
Preference number: 2 (lower is better)
Translates to: GGTAAAVLAVVVGHEVDESGLPS*LVARPW
Trigger: CCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGA...CTCATCGACCTCATGGCCAACAACGACAGCGAGGACAGCGGCTGCGGTGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp GTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGTGGCCTCCCGGACCCTaGCCAGGAAGGCCCGCAGCT +
Preference number: 2 (lower is better)
Translates to: VTDRLMQEVDLASPEQALWPPGP*PGRPAA
Trigger: AGCTGCGGGCCTTCCTGGCCAGGGTCCGGGAGGCCA...CAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp ATCTCTTCCATTTCAGCCAAGGTAGGCGCCTTGAGCAGCACGCGGGGCCGCGGGTCTGCAGCATCTCCTTaGCCTCCCGGACCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: ISSISAKVGALSSTRGRGSAASP*PPGPWP
Trigger: TGGCCAGGGTCCGGGAGGCCAAGGAGATGCTGCAGA...CCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR GCA 90 bp CCACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTGCCTCCCAGGAGGACCCAGAGACTTCCCAGATaGCTCTGCTGCCTGAGTCCC +
Preference number: 2 (lower is better)
Translates to: PPRLARPFKQVGVPPRRTQRLPR*LCCLSP
Trigger: GGGACTCAGGCAGCAGAGGCATCTGGGAAGTCTCTG...GGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR GCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGAGGAAGGCCCTGCCCTaGGGTGAGGTTCCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRRKALP*GEVPVL
Trigger: CAAAACTGGAACCTCACCGCAGGGCAGGGCCTTCCT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR GCA 90 bp ATCTCTTCCATTTCAGCCAAGGTAGGCGCCTTGAGCAGCACGCGGGGCCGCGGGCGCAGCCTCCGCTCCTaGTTGATCTCCTCCAGGATC +
Preference number: 2 (lower is better)
Translates to: ISSISAKVGALSSTRGRGRSLRS*LISSRI
Trigger: GATCCTGGAGGAGATCAAGCAGGAGCGGAGGCTGCG...CCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCAGATACAGGGCCTGCCTaGTGCCTCCTGGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPADTGPA*CLLEAW
Trigger: CCAGGCCTCCAGGAGGCACCAGGCAGGCCCTGTATC...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR CCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGAAGAGCATGGGAACATaGGATGCAGTCTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVKSMGT*DAVCAR
Trigger: CCTGGCACAGACTGCATCCCATGTTCCCATGCTCTT...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGTGAGGTTCCAGTTTTaGTCGGGTGGGGTTTCGGGG +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRVRFQF*SGGVSG
Trigger: CCCCGAAACCCCACCCGACCAAAACTGGAACCTCAC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGAAAATTAGCCGGGCGTaGTGGCGGGCACCAGTAGTC +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRKISRA*WRAPVV
Trigger: GACTACTGGTGCCCGCCACCACGCCCGGCTAATTTT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CCA 90 bp CTCTTCCATTTCAGCCAAGGTAGGCGCCTTGAGCAGCACGCGGGGCCGCGGGCGTCTGGAGGTGGGTTGTaGGCACTCCCTCAGATTCTC +
Preference number: 2 (lower is better)
Translates to: LFHFSQGRRLEQHAGPRASGGGL*ALPQIL
Trigger: GAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGA...CGCCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR TCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCACAGAGCGTCCTAGCCTaGTACAGGGCCTGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPAQSVLA*YRACLV
Trigger: CACCAGGCAGGCCCTGTATCAGGCTAGGACGCTCTG...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR TCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACGCGCCTGAACCCAAATaGGCTCTGGGGCCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHAPEPK*ALGPGN
Trigger: GTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGC...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGTTTCCTGTTTGCACCTaGAGTCGTCTCCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRFPVCT*SRLPDP
Trigger: GGGGTCAGGGAGACGACTTCAGGTGCAAACAGGAAA...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR GCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCTGAGATCGCACCACTaGAGTCCAACCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRLRSHH*SPTWVT
Trigger: TGTCACCCAGGTTGGACTGCAGTGGTGCGATCTCAG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR GCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGCAACTAGCCGAGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRATSRG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCTCGGCTAGTTGC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CCA 90 bp CTGCCCGAGGCGTCTCCAGATGCGGCTCGTCCTCCCGAAGCTTCTGCAGCATCTCAGTGGAGGAGGATCTaGAGGTGGGTTGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: LPEASPDAARPPEASAASQWRRI*RWVVGT
Trigger: AGTGCCCACAACCCACCTCCAGATCCTCCTCCACTG...AGATGCTGCAGAAGCTTCGGGAGGACGAGCCGCATCTGGAGACGCCTCGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CAA 90 bp ATCAGCATCTCGAAGGGCGTGAGCTGGAACTCGGTGGGGAGGGGGTaGAACTCCTGCTCTTGCACCTTCTTCAGCTTCACTCCGCGGCGG +
Preference number: 2 (lower is better)
Translates to: ISISKGVSWNSVGRG*NSCSCTFFSFTPRR
Trigger: CCGCCGCGGAGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGAGTTCCAGCTCACGCCCTTCGAGATGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGCAGTCCAACCTGGGTaGCAGAGGGAGATTCTATCT +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRAVQPG*QREILS
Trigger: AGATAGAATCTCCCTCTGTCACCCAGGTTGGACTGC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CCA 90 bp CAGGATGAGCTCGTGAGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCATCCACAGGTTCTGGAGACAGTaGAGGAGGATCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: QDELVSVLLHPGRDVPIHRFWRQ*RRIWRW
Trigger: CCACCTCCAGATCCTCCTCCACTGTCTCCAGAACCT...GTGGATGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAGCTCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CAA 90 bp CCGCTCCTGCTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTaGCTTTGGTGGCAACGGGCGCAGCCGCCTCTCAGAGACCTGCTT +
Preference number: 2 (lower is better)
Translates to: PLLLDLLQDLLMQGP*LWWQRAQPPLRDLL
Trigger: AAGCAGGTCTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAGGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR TCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCCTGGCAAGGAATCCTaGGAAGAAACAGCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPPGKES*EETASP
Trigger: GGGGGAGGCTGTTTCTTCTCAGGATTCCTTGCCAGG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCACTGGTCACCAGGCTaGTTTTTCCTGTTTGCACCT +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRHWSPG*FFLFAP
Trigger: AGGTGCAAACAGGAAAAATCAGCCTGGTGACCAGTG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR TCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCACTGGTCTCAAACTCCTaGCCTCAGGTGATCCTCCCT +
Preference number: 2 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPALVSNS*PQVILP
Trigger: AGGGAGGATCACCTGAGGTCAGGAGTTTGAGACCAG...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR TCA 90 bp CCGCTCCTGCTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTGGGCATCTCGAAGGGCGTaGGCTGGAACTCGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PLLLDLLQDLLMQGPLLWASRRA*AGTRWG
Trigger: TCCCCACCGAGTTCCAGCTCACGCCCTTCGAGATGC...CCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAGGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR GCA 90 bp GCATCTGTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGCGCCTCTCAGAGACCTaGTTCAGTGGAGGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: ASVTDRLMQEVDLASPEQRLSET*FSGGRE
Trigger: CTCACGGCCTCCACTGAAGCAGGTCTCTGAGAGGCG...CTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACGGACGGAGAAGAGCATaGGAACATGGGATGCAGTCT +
Preference number: 2 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHGRRRA*EHGMQS
Trigger: AGACTGCATCCCATGTTCCCATGCTCTTCTCCGTCC...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR CCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCAGAGGCAGGACACATGTaGTTTGGACCCCAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPAEAGHM*FGPQGK
Trigger: CTTTCCCTGGGGTCCAAACCACATGTGTCCTGCCTC...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR TCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTCCCCAGGGAGGGTTTTaGAGTGCGCCTGAACCCAAA +
Preference number: 2 (lower is better)
Translates to: VRTAPECGRARRGRTHVVPQGGF*SAPEPK
Trigger: TTTGGGTTCAGGCGCACTTCAAAACCCTCCCTGGGG...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR TCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCTGGGCCAGGGGCGAGTaGGGACAGCACCAGAATGTG +
Preference number: 2 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCWARGE*GQHQNV
Trigger: CACATTCTGGTGCTGTCCTCACTCGCCCCTGGCCCA...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR GCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCATGGGAACATGGGATaGAGTCTGTGCCAGGATCTA +
Preference number: 2 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHHGNMG*SLCQDL
Trigger: TAGATCCTGGCACAGACTGCATCCCATGTTCCCATG...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR GCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTCTGGGGAAGGGAAACTaGCGTTCGCATTCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASLGKGN*RSHSWG
Trigger: TCCCCAGGAATGCGAACGGCAGTTTCCCTTCCCCAG...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR CCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTCACCTAGACGTCCACTaGGGAAGGGAAACTGCCGTT +
Preference number: 2 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASHLDVH*GRETAV
Trigger: AACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTG...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGAAAGGCAGTAGAAAGTaGAAACATGACGTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRKGSRK*KHDVPD
Trigger: GTCTGGAACGTCATGTTTCCACTTTCTACTGCCTTT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR GCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCTCCCAGGAGGACCCTaGCTACTCAGAGACTTCCCA +
Preference number: 2 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCLPGGP*LLRDFP
Trigger: TGGGAAGTCTCTGAGTAGGCAGGGTCCTCCTGGGAG...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR GCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATGGGATGCAGTCTGTaGCAGGATCTAGAACCTTCT +
Preference number: 2 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRMGCSL*QDLEPS
Trigger: AGAAGGTTCTAGATCCTGGCACAGACTGCATCCCAT...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR GCA 90 bp GTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGTCCAGGATCTTCTCATaGAGGGACCTTTGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: VTDRLMQEVDLASPEQALSRIFS*RDLCFG
Trigger: ACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGA...CAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CCA 90 bp CCGCTCCTGCTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTGGCTAGTGGCACGACCATaGTTGCAGGTTCTGGAGACA +
Preference number: 2 (lower is better)
Translates to: PLLLDLLQDLLMQGPLLWLVARP*LQVLET
Trigger: TGTCTCCAGAACCTGCAACCATGGTCGTGCCACTAG...CCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAGGAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR TCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCGTTTTGAAGTGCGCCTaGACCCAAATGAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCVLKCA*TQMSSG
Trigger: CCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAAAC...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR CCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTAACCCAAATGAGCTCTaGGGCCAGGAAACAGTGTAT +
Preference number: 2 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASNPNEL*GQETVY
Trigger: ATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTT...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR GCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCGGATCTAGAACCTTCTaGTTTCTCTCTTCAGTGAGA +
Preference number: 2 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRGSRTF*FLSSVR
Trigger: TCTCACTGAAGAGAGAAAGCAGAAGGTTCTAGATCC...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR-3UTR GCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCATGTATATATGTACATaGACAGCTCAGAGCGTCCTA +
Preference number: 2 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFMYICT*TAQSVL
Trigger: TAGGACGCTCTGAGCTGTGCATGTACATATATACAT...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CCA 72 bp CCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCGCATaGCCTGGGCAAAGGTGCGCACGCTGCGGGGGACGC +
Preference number: 3 (lower is better)
Translates to: PGGRSAAPRTAA*PGQRCARCGGR
Trigger: GCGTCCCCCGCAGCGTGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGGCGCGGCTGACCGACCCCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 72 bp GCCGCGCCGCGCACAGCCGCATGGCCTGGGCAAAGGTaGGCACGCTGCGGGGGACGCCCTCGGCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: AAPRTAAWPGQR*ARCGGRPRPPP
Trigger: AGGAGGAGGCCGAGGGCGTCCCCCGCAGCGTGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGGCGCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 72 bp GGGTCGGTCAGCCGCGCCGCGCACAGCCGCATGGCCTaGGCAAAGGTGCGCACGCTGCGGGGGACGCCCTCG +
Preference number: 3 (lower is better)
Translates to: GSVSRAAHSRMA*AKVRTLRGTPS
Trigger: CGAGGGCGTCCCCCGCAGCGTGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGGCGCGGCTGACCGACCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 72 bp GAAGAGCGCGCGGCACACGGCCTGGTAATGCGCCTGTaGGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAG +
Preference number: 3 (lower is better)
Translates to: EERAAHGLVMRL*APGVGQPRRAQ
Trigger: CTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGCCGCGCGCTCTTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp CAGGGCAGAGAGCCAAACCCGCGGGCAGCCCAGCCCTCGCCCCGCACCGGGCGCTCGGTGGGGAGGGGGTaGAACTCCTGCTCTTGCACC +
Preference number: 3 (lower is better)
Translates to: QGREPNPRAAQPSPRTGRSVGRG*NSCSCT
Trigger: GGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGA...GCGCCCGGTGCGGGGCGAGGGCTGGGCTGCCCGCGGGTTTGGCTCTCTGCCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 72 bp CGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCACGGTCTGGGCTTCCG +
Preference number: 3 (lower is better)
Translates to: RSRPAPSPARGR*RSRGTARSGLP
Trigger: CGGAAGCCCAGACCGTGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp CTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGAGCTTACAGTGGCAGTaGAGGGTCCAGGTGCTGACC +
Preference number: 3 (lower is better)
Translates to: LHEERAAHGLVMRLCAPGSLQWQ*RVQVLT
Trigger: GGTCAGCACCTGGACCCTCAACTGCCACTGTAAGCT...CCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 72 bp CCGCGGGCGCTGGGCGCTGCCCCCAGCATCTGTGACTaGCAGGTTGATGCAGGAGGTGGACTTGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: PRALGAAPSICD*QVDAGGGLGIS
Trigger: GGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGCTGGGGGCAGCGCCCAGCGCCCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp CCGCTCCAGCTGAGGGCTGAGTTCGCGCTCCTCGCTCTCGTCCAGCCCCCAGTCGGATCTGGAGGTGGGTaGTGGGCACTCCCTCAGATT +
Preference number: 3 (lower is better)
Translates to: PLQLRAEFALLALVQPPVGSGGG*WALPQI
Trigger: AATCTGAGGGAGTGCCCACAACCCACCTCCAGATCC...GACTGGGGGCTGGACGAGAGCGAGGAGCGCGAACTCAGCCCTCAGCTGGAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp CCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGCGCTGTCCTCGCTGTCGTaGTTGGCCATGAGGTCGATG +
Preference number: 3 (lower is better)
Translates to: PAAPASPRRARGTRPGNALSSLS*LAMRSM
Trigger: CATCGACCTCATGGCCAACAACGACAGCGAGGACAG...CGCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGGTGAGGTTCCAGTTTaGGTCGGGTGGGGTTTCGGG +
Preference number: 3 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRGEVPV*VGWGFG
Trigger: CCCGAAACCCCACCCGACCAAAACTGGAACCTCACC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CAA 90 bp ATCTCTTCCATTTCAGCCAAGGTAGGCGCCTTGAGCAGCACGCGGGGCCGCGGGATGCAGGAGGTGGACTaGGCATCTCCGGAGCAGGCG +
Preference number: 3 (lower is better)
Translates to: ISSISAKVGALSSTRGRGMQEVD*ASPEQA
Trigger: CGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCAT...CCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 72 bp TCGTTGTTGGCCATGAGGTCGATGAGCCGCTCCAGCTaGGGGCTGAGTTCGCGCTCCTCGCTCTCGTCCAGC +
Preference number: 3 (lower is better)
Translates to: SLLAMRSMSRSS*GLSSRSSLSSS
Trigger: GCTGGACGAGAGCGAGGAGCGCGAACTCAGCCCTCAGCTGGAGCGGCTCATCGACCTCATGGCCAACAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 72 bp CCTTCTTCAGCTTCACTCCGCGGCGGAGCTCCCGCATaGGCTGAACCCACAGTCGGGCCCAGTCTGTGTGAC +
Preference number: 3 (lower is better)
Translates to: PSSASLRGGAPA*AEPTVGPSLCD
Trigger: GTCACACAGACTGGGCCCGACTGTGGGTTCAGCTCATGCGGGAGCTCCGCCGCGGAGTGAAGCTGAAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 72 bp GGAGGCCGTGAGCGGATAAAGTCCAGGATGAGCTCGTaGGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCA +
Preference number: 3 (lower is better)
Translates to: GGRERIKSRMSS*ASFFTRGGMSP
Trigger: TGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAGCTCATCCTGGACTTTATCCGCTCACGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 72 bp TCTGGAGACAGTGGAGGAGGATCTGGAGGTGGGTTGTaGGCACTCCCTCAGATTCTCGGCCCCCGGTCCGCT +
Preference number: 3 (lower is better)
Translates to: SGDSGGGSGGGL*ALPQILGPRSA
Trigger: AGCGGACCGGGGGCCGAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGATCCTCCTCCACTGTCTCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCTTGAGCCCAGGAGTTaGAGACTAGTCCGGGCAACA +
Preference number: 3 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRLEPRS*RLVRAT
Trigger: TGTTGCCCGGACTAGTCTCAAACTCCTGGGCTCAAG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR-3UTR CAA 90 bp ATCTCTTCCATTTCAGCCAAGGTAGGCGCCTTGAGCAGCACGCGGGGCCGCGGGGTGGCACGACCATGGTaGCAGGTTCTGGAGACAGTG +
Preference number: 3 (lower is better)
Translates to: ISSISAKVGALSSTRGRGVARPW*QVLETV
Trigger: CACTGTCTCCAGAACCTGCAACCATGGTCGTGCCAC...CCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 72 bp CACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTaGCTCCCAGGAGGACCCTGCCTACTCAGAGACTTC +
Preference number: 3 (lower is better)
Translates to: HHAWPDLSNRWG*LPGGPCLLRDF
Trigger: GAAGTCTCTGAGTAGGCAGGGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR GCA 72 bp GTGAGCTGGAACTCGGTGGGGAGGGGGTTGAACTCCTaGTCTTGCACCTTCTTCAGCTTCACTCCGCGGCGG +
Preference number: 3 (lower is better)
Translates to: VSWNSVGRGLNS*SCTFFSFTPRR
Trigger: CCGCCGCGGAGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGAGTTCCAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 72 bp TGCAGGTTCTGGAGACAGTGGAGGAGGATCTGGAGGTaGGTTGTGGGCACTCCCTCAGATTCTCGGCCCCCG +
Preference number: 3 (lower is better)
Translates to: CRFWRQWRRIWR*VVGTPSDSRPP
Trigger: CGGGGGCCGAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGATCCTCCTCCACTGTCTCCAGAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR TCA 72 bp GCTGATTTTTCCTGTTTGCACCTGAAGTCGTCTCCCTaGCCCCGGCTCTGTGTCTGGGAGGCCGGCCCTGCA +
Preference number: 3 (lower is better)
Translates to: ADFSCLHLKSSP*PRLCVWEAGPA
Trigger: TGCAGGGCCGGCCTCCCAGACACAGAGCCGGGGTCAGGGAGACGACTTCAGGTGCAAACAGGAAAAATCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR TCA 72 bp CAGCCGCCTCTCAGAGACCTGCTTCAGTGGAGGCCGTaGGCGGATAAAGTCCAGGATGAGCTCGTGAGCGTC +
Preference number: 3 (lower is better)
Translates to: QPPLRDLLQWRP*ADKVQDELVSV
Trigger: GACGCTCACGAGCTCATCCTGGACTTTATCCGCTCACGGCCTCCACTGAAGCAGGTCTCTGAGAGGCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 72 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTaGCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGG +
Preference number: 3 (lower is better)
Translates to: AMCTDLQSCSSL*QDRPASSGASG
Trigger: CCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CCA 72 bp GGAGCCAAGATACCCTGTCCCCACCTAGACGTCCACTaGGGAAGGGAAACTGCCGTTCGCATTCCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: GAKIPCPHLDVH*GRETAVRIPGD
Trigger: GTCCCCAGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CCA 72 bp GCCCTGCCCTGCGGTGAGGTTCCAGTTTTGGTCGGGTaGGGTTTCGGGGCACTGGTCACCAGGCTGATTTTT +
Preference number: 3 (lower is better)
Translates to: ALPCGEVPVLVG*GFGALVTRLIF
Trigger: AAAAATCAGCCTGGTGACCAGTGCCCCGAAACCCCACCCGACCAAAACTGGAACCTCACCGCAGGGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR CCA 72 bp CGGTCTGGGCTTCCGAGCTGGCTAGTGGCACGACCATaGTTGCAGGTTCTGGAGACAGTGGAGGAGGATCTG +
Preference number: 3 (lower is better)
Translates to: RSGLPSWLVARP*LQVLETVEEDL
Trigger: CAGATCCTCCTCCACTGTCTCCAGAACCTGCAACCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 72 bp CTCCTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTaGTGGCAACGGGCGCAGCCGCCTCTCAGAGACCTG +
Preference number: 3 (lower is better)
Translates to: LLQDLLMQGPLL*WQRAQPPLRDL
Trigger: CAGGTCTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGCTGATTTTTCCTGTTaGCACCTGAAGTCGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRADFSC*HLKSSP
Trigger: GGGAGACGACTTCAGGTGCAAACAGGAAAAATCAGC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563972.1
3UTR GCA 72 bp CTCCGCTCCTGCTTGATCTCCTCCAGGATCTTCTCATaGAGGGACCTTTGCTTTGGTGGCAACGGGCGCAGC +
Preference number: 3 (lower is better)
Translates to: LRSCLISSRIFS*RDLCFGGNGRS
Trigger: GCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAGGAGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 72 bp CGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTaGGGACGGAGAAGAGCATGGGAACATGGGATGCAG +
Preference number: 3 (lower is better)
Translates to: RPLGKGNCRSHS*GRRRAWEHGMQ
Trigger: CTGCATCCCATGTTCCCATGCTCTTCTCCGTCCCCAGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CCA 72 bp CTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTGGTaGCAACGGGCGCAGCCGCCTCTCAGAGACCTGCTT +
Preference number: 3 (lower is better)
Translates to: LQDLLMQGPLLW*QRAQPPLRDLL
Trigger: AAGCAGGTCTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR-3UTR CAA 90 bp GCATCTGTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGTCCTCGCTGTCGTTGTaGGCCATGAGGTCGATGAGC +
Preference number: 3 (lower is better)
Translates to: ASVTDRLMQEVDLASPEQSSLSL*AMRSMS
Trigger: GCTCATCGACCTCATGGCCAACAACGACAGCGAGGA...CTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 72 bp AGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTaGTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: RPRVAMCTDLQS*SSLCQDRPASS
Trigger: TGAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR GCA 72 bp TTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTaGTTTGGTGGCAACGGGCGCAGCCGCCTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: LISSRIFSCRDL*FGGNGRSRLSE
Trigger: CTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CCA 72 bp CATGGTTGCAGGTTCTGGAGACAGTGGAGGAGGATCTaGAGGTGGGTTGTGGGCACTCCCTCAGATTCTCGG +
Preference number: 3 (lower is better)
Translates to: HGCRFWRQWRRI*RWVVGTPSDSR
Trigger: CCGAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGATCCTCCTCCACTGTCTCCAGAACCTGCAACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR GCA 72 bp TGTGAGACCTCCTTTATTAGGCCAAGAGTGGCCATGTaGACAGATTTACAGAGCTGCTCCTCCCTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: CETSFIRPRVAM*TDLQSCSSLCQ
Trigger: CTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAATAAAGGAGGTCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR GCA 72 bp CATGGGATGCAGTCTGTGCCAGGATCTAGAACCTTCTaGTTTCTCTCTTCAGTGAGAAAACCCACCCTGTTC +
Preference number: 3 (lower is better)
Translates to: HGMQSVPGSRTF*FLSSVRKPTLF
Trigger: GAACAGGGTGGGTTTTCTCACTGAAGAGAGAAAGCAGAAGGTTCTAGATCCTGGCACAGACTGCATCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp CAGGGCAGAGAGCCAAACCCGCGGGCAGCCCAGCCCTCGCCCCGCACCGGGCGCGGCGGAGCTCCCGCATaGGCTGAACCCACAGTCGGG +
Preference number: 4 (lower is better)
Translates to: QGREPNPRAAQPSPRTGRGGAPA*AEPTVG
Trigger: CCCGACTGTGGGTTCAGCTCATGCGGGAGCTCCGCC...GCGCCCGGTGCGGGGCGAGGGCTGGGCTGCCCGCGGGTTTGGCTCTCTGCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp ATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCGCATGGCCGGTGGGGAGGGGGTTaGACTCCTGCTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: MRLCAPGVGQPRRAQPHGRWGGG*TPALAP
Trigger: AGGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCG...GCCATGCGGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp CCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCCCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: PGNAPVRPGGRSAAPRTAPARGR*RSRGTA
Trigger: TGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGG...GGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp GCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCTCGAAGGGCGTGAGCTaGAACTCGGTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AHGLVMRLCAPGVGQPRRSKGVS*NSVGRG
Trigger: CCCCCTCCCCACCGAGTTCCAGCTCACGCCCTTCGA...GCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp CTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGCCGCGCACAGCCGCATaGCCTGGGCAAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LHEERAAHGLVMRLCAPGPRTAA*PGQRCA
Trigger: TGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGG...CCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp TGGCCAGGAAGGCCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGTGGCCTCCCGGACCCTaGCCAGGAAGGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: WPGRPAAPASPRRARGTRWPPGP*PGRPAA
Trigger: AGCTGCGGGCCTTCCTGGCCAGGGTCCGGGAGGCCA...CCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCCTTCCTGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGTGGCCTGGGCAAAGGTaGGCACGCTGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVWPGQR*ARCGGR
Trigger: GCGTCCCCCGCAGCGTGCGCACCTTTGCCCAGGCCA...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp CCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGCGCTGGTAATGCGCCTGTaGGCCCCGGGGGTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PAAPASPRRARGTRPGNALVMRL*APGVGQ
Trigger: CTGACCGACCCCCGGGGCGCACAGGCGCATTACCAG...CGCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp CCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCTCATGCAGGGACCTTTaGTTTGGTGGCAACGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGNAPVRPGGRSAAPRTASCRDL*FGGNGR
Trigger: GCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGA...GGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp GCGCTCCTCGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATGGCGAAGCCGCATCTCGAAGGGCGTaGGCTGGAACTCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ALLALVQPPVQRAVDGEAASRRA*AGTRWG
Trigger: TCCCCACCGAGTTCCAGCTCACGCCCTTCGAGATGC...GGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCGAGGAGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp GCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCTGTCCCCATCCACCATaGCCTTGCGCAGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: AHGLVMRLCAPGVGQPRRCPHPP*PCAACS
Trigger: ACTACAAGCTGCGCAAGGTCATGGTGGATGGGGACA...GCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp GCGCTCCTCGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATGGCGAAGCCGGACCTTTGCTTTGGTaGCAACGGGCGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ALLALVQPPVQRAVDGEAGPLLW*QRAQPP
Trigger: AGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCC...GGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCGAGGAGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp CCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCTCTGGAGGTGGGTTGTaGGCACTCCCTCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: PGNAPVRPGGRSAAPRTASGGGL*ALPQIL
Trigger: GAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGA...GGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGGCATCTCGAAGGGCGTaGGCTGGAACTCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVASRRA*AGTRWG
Trigger: TCCCCACCGAGTTCCAGCTCACGCCCTTCGAGATGC...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCAGGGGGTTGAACTCCTaGTCTTGCACCTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AHGLVMRLCAPGVGQPRRRGLNS*SCTFFS
Trigger: GCTGAAGAAGGTGCAAGAGCAGGAGTTCAACCCCCT...GCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCCGGGCCTCCACACATaGGCACTGCCAGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTPGLHT*ALPARG
Trigger: GCCCCGAGCTGGCAGTGCGCATGTGTGGAGGCCCGG...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGCGTCTGCAGCATCTCCTTaGCCTCCCGGACCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAAPASPRRARGTRPGNASAASP*PPGPWP
Trigger: TGGCCAGGGTCCGGGAGGCCAAGGAGATGCTGCAGA...CGCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp TGGCCAGGAAGGCCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGTGCAGGAGGTGGACTTaGCATCTCCGGAGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: WPGRPAAPASPRRARGTRCRRWT*HLRSRR
Trigger: ACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCA...CCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCCTTCCTGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp ACAGCCGCATGGCCTGGGCAAAGGTGCGCACGCTGCGGGGGACGCCCTCGGCCTAGGAGGATCTGGAGGTaGGTTGTGGGCACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TAAWPGQRCARCGGRPRPRRIWR*VVGTPS
Trigger: TGAGGGAGTGCCCACAACCCACCTCCAGATCCTCCT...AGGCCGAGGGCGTCCCCCGCAGCGTGCGCACCTTTGCCCAGGCCATGCGGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp GCACACGGCCTGGTAATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCCTAGTGGCACGACCATaGTTGCAGGTTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: AHGLVMRLCAPGVGQPRRLVARP*LQVLET
Trigger: TGTCTCCAGAACCTGCAACCATGGTCGTGCCACTAG...GCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCATTACCAGGCCGTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGACGCCTGCTCCTCGTTaGGCGGCTGCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRTPAPR*AAARRP
Trigger: AGGCCTACGAGCAGCCGCTCAACGAGGAGCAGGCGT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR GCA 90 bp CCACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTGCCTCCCAGGAGGACCTGGCACGACCATGGTTaGAGGTTCCGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PPRLARPFKQVGVPPRRTWHDHG*RFRGLG
Trigger: CCCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCA...GGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGTGGCACGACCATGGTTaGAGGTTCCGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRWHDHG*RFRGLG
Trigger: CCCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCA...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR GCA 90 bp CTCGTGAGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCATCCACCATGACCTTTGGCCTGGGCAAAGGTaGGCACGCTGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: LVSVLLHPGRDVPIHHDLWPGQR*ARCGGR
Trigger: GCGTCCCCCGCAGCGTGCGCACCTTTGCCCAGGCCA...AAGGTCATGGTGGATGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp CTCTTCCATTTCAGCCAAGGTAGGCGCCTTGAGCAGCACGCGGGGCCGCGGGCGCGGGCCCGGATGTCCTaGATCAGCATCTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LFHFSQGRRLEQHAGPRARARMS*ISISKG
Trigger: GCCCTTCGAGATGCTGATGCAGGACATCCGGGCCCG...CGCCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGCCCAGATGCCTCTGCTaGCTGAGTCCCCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVPRCLC*LSPHKG
Trigger: CCCTTTGTGGGGACTCAGGCAGCAGAGGCATCTGGG...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCCGGGAGGCGGCGGTTaGAGTGAGCCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRPGGGG*SEPRSR
Trigger: GCGTGATCTTGGCTCACTGCAACCGCCGCCTCCCGG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR CCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGGCAAGCAGGGCACTCTaGTCCAGCTGGGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVASRAL*SSWEPR
Trigger: TCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGC...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGAGGCGGCGGTTGCAGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRRRRLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGCAACCGCCGCCT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR TCA 90 bp GCGCTCCTCGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATGGCGAAGCCATCATCCTGGGTTTCTaGCCTCTTCAACCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: ALLALVQPPVQRAVDGEAIILGF*PLQPRP
Trigger: AGGCCGCGGTTGAAGAGGTCAGAAACCCAGGATGAT...GGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCGAGGAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGGGAACGCACCACGTCTaGCACAAAGCTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVGTHHV*HKAGAL
Trigger: GAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCC...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGCTGGGGAAGGGAAACTaGCGTTCGCATTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVLGKGN*RSHSWG
Trigger: TCCCCAGGAATGCGAACGGCAGTTTCCCTTCCCCAG...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp TCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATGGCGAAGCCGAGGGACTGCATCTGGGCTTCCGAGCTaGCTAGTGGCACGACCATGG +
Preference number: 4 (lower is better)
Translates to: SRPAPSPARGRWRSRGTASGLPS*LVARPW
Trigger: CCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGA...TGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCGCGCACAGCCGCATaGCCTGGGCAAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHPRTAA*PGQRCA
Trigger: TGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGG...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATGGCCTCCCGGACCCTaGCCAGGAAGGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPAWPPGP*PGRPAA
Trigger: AGCTGCGGGCCTTCCTGGCCAGGGTCCGGGAGGCCA...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCTCGAAGGGCGTGAGCTaGAACTCGGTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTSKGVS*NSVGRG
Trigger: CCCCCTCCCCACCGAGTTCCAGCTCACGCCCTTCGA...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCAGCTCGGGGCCGTGGTaGCTCCGTCCCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFSSGPW*LRPSWG
Trigger: CCCCCAGGAGGGACGGAGCCACCACGGCCCCGAGCT...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTGCGGGACAGGTACCCTaGTCTCGGGAGCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPAGQVP*SREPGL
Trigger: GAGGCCCGGCTCCCGAGACCAGGGTACCTGTCCCGC...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGAGAACAGCGGGAACTTaGCCCGGCAGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVRTAGT*PGSSSK
Trigger: TTTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCT...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGCTGGGCTTCCGAGCTaGCTAGTGGCACGACCATGG +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRAGLPS*LVARPW
Trigger: CCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR CCA 90 bp GCGCTCCTCGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATGGCGAAGCCGAGAGGAGCTTACAGTaGCAGTTGAGGGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALLALVQPPVQRAVDGEAERSLQ*QLRVQV
Trigger: CACCTGGACCCTCAACTGCCACTGTAAGCTCCTCTC...GGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCGAGGAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACACGCCTGCTCCTCGTTaGGCGGCTGCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHTPAPR*AAARRP
Trigger: AGGCCTACGAGCAGCCGCTCAACGAGGAGCAGGCGT...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCGGGCCCGGATGTCCTaGATCAGCATCTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTRARMS*ISISKG
Trigger: GCCCTTCGAGATGCTGATGCAGGACATCCGGGCCCG...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCTAGTGGCACGACCATaGTTGCAGGTTCCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRLVARP*LQVPRP
Trigger: AGGCCGCGGAACCTGCAACCATGGTCGTGCCACTAG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR CCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCACAGCCGCATGGCCTaGGCAAAGGTGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHHSRMA*AKVRTL
Trigger: CAGCGTGCGCACCTTTGCCCAGGCCATGCGGCTGTG...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CAGGATGAGCTCGTGAGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCATCCACCAGGGACCTTTGCTTTaGTGGCAACGGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QDELVSVLLHPGRDVPIHQGPLL*WQRAQP
Trigger: CGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTG...GTGGATGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAGCTCATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp TCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATGGCGAAGCCGAGGGACTGCACAGTGGAGGAGGATCTaGAGGTGGGTTGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: SRPAPSPARGRWRSRGTAQWRRI*RWVVGT
Trigger: AGTGCCCACAACCCACCTCCAGATCCTCCTCCACTG...TGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CAA 72 bp ATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTaGAGGATGCAGGGCAGAGAGCCAAACCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MQEVDLASPEQA*RMQGREPNPRA
Trigger: TGCCCGCGGGTTTGGCTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CAA 72 bp CGCTGGGCGCTGCCCCCAGCATCTGTGACTGACAGGTaGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RWALPPASVTDR*MQEVDLASPEQ
Trigger: CTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGCTGGGGGCAGCGCCCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTGCTCCAGCTGAGGGCTaGGTTCGCGCTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPAPAEG*VRAPRS
Trigger: AGAGCGAGGAGCGCGAACTCAGCCCTCAGCTGGAGC...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCAATGAGCCGCTCCAGCTaGGGGCTGAGTTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPAMSRSS*GLSSRS
Trigger: GGAGCGCGAACTCAGCCCTCAGCTGGAGCGGCTCAT...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp AGATTCTCGGCCCCCGGTCCGCTGCAGTCGGCAGAATCACGGCCCCTAAAGCTGTCCAGGATGAGCTCGTaGGCGTCCTTCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: RFSAPGPLQSAESRPLKLSRMSS*ASFFTR
Trigger: CCGGGTGAAGAAGGACGCTCACGAGCTCATCCTGGA...CAGCTTTAGGGGCCGTGATTCTGCCGACTGCAGCGGACCGGGGGCCGAGAATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp CCACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTGCCTCCCAGGAGGACCTCCTCCCGAAGCTTCTaGAGCATCTCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPRLARPFKQVGVPPRRTSSRSF*SISLAS
Trigger: GGAGGCCAAGGAGATGCTGCAGAAGCTTCGGGAGGA...GGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCGCCTCTCAGAGACCTaGTTCAGTGGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTRLSET*FSGGRE
Trigger: CTCACGGCCTCCACTGAAGCAGGTCTCTGAGAGGCG...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTTCCACACATGCGCACTaGCAGCTCGGGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPSTHAH*QLGAVV
Trigger: CACCACGGCCCCGAGCTGGCAGTGCGCATGTGTGGA...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGTGCAGACGTCAGCTGTaGCCCTCATCTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRCRRQL*PSSVQL
Trigger: CAGCTGCACAGATGAGGGGCACAGCTGACGTCTGCA...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR CCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCTGCAGAAGAGACAGCTaGGCGGCCACGAGAACAGCG +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTCRRDS*AATRTA
Trigger: CGCTGTTCTCGTGGCCGCCCAGCTGTCTCTTCTGCA...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGCCTCATCTGTGCAGCTaGGCTTCCGAGCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRPHLCS*ASELAS
Trigger: ACTAGCCAGCTCGGAAGCCCAGCTGCACAGATGAGG...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR TCA 90 bp GTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGATGAGCCGCTCCAGCTaGGGGCTGAGTTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: VTDRLMQEVDLASPEQALMSRSS*GLSSRS
Trigger: GGAGCGCGAACTCAGCCCTCAGCTGGAGCGGCTCAT...CAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp GTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGAGCTCCCGCATGAGCTaGACCCACAGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTDRLMQEVDLASPEQALSSRMS*THSRAQ
Trigger: CTGGGCCCGACTGTGGGTTCAGCTCATGCGGGAGCT...CAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCGGTGGGGAGGGGGTTaGACTCCTGCTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPRWGGG*TPALAP
Trigger: AGGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACGGCCAGGTCATGCTCTaGGAAGGAGCGGTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHGQVML*EGAVPF
Trigger: AAACGGGACCGCTCCTTCTCAGAGCATGACCTGGCC...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCAGAGCGTCCTAGCCTaGTACAGGGCCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPQSVLA*YRACLV
Trigger: CACCAGGCAGGCCCTGTATCAGGCTAGGACGCTCTG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp CCACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTGCCTCCCAGGAGGACCCTGGTCTCAAACTCCTaGCCTCAGGTGATCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PPRLARPFKQVGVPPRRTLVSNS*PQVILP
Trigger: AGGGAGGATCACCTGAGGTCAGGAGTTTGAGACCAG...GGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGGCAGGAGAATTGCTTaGACCCAGGAGACGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRGRRIA*TQETEV
Trigger: AACCTCCGTCTCCTGGGTTCAAGCAATTCTCCTGCC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGTAGTCCCAGCTACTTaGGAGGCTGGCCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRVVPAT*EAGQEN
Trigger: ATTCTCCTGGCCAGCCTCTCAAGTAGCTGGGACTAC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR TCA 90 bp TTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGAGGATGCAGGGCCCAGGTGCTGACCCCTaGCAGGTGGATCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LMQEVDLASPEQALRMQGPGADP*QVDHPG
Trigger: CCCAGGATGATCCACCTGTCAGGGGTCAGCACCTGG...GCCCTGCATCCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCGCGAAGCCGAGGGACTaGACGGTCTGGGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRAKPRD*TVWASE
Trigger: CTCGGAAGCCCAGACCGTGCAGTCCCTCGGCTTCGC...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTCTGGTAATGCGCCTGTaGGCCCCGGGGGTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVLVMRL*APGVGQ
Trigger: CTGACCGACCCCCGGGGCGCACAGGCGCATTACCAG...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTGGGTGGGTGGCCGACTaGAGGCCAGAGGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASGWVAD*RPEATS
Trigger: TGAGGTGGCCTCTGGCCTGCAGTCGGCCACCCACCC...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCGCCAGCTCGGGGCCGTaGTGGCTCCGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCASSGP*WLRPSW
Trigger: CCAGGAGGGACGGAGCCACCACGGCCCCGAGCTGGC...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCTGGCATCGGGGGTCATaGAGGCCTCGGGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFWHRGS*RPRVCP
Trigger: GGGACAGACCCGAGGCCTCCATGACCCCCGATGCCA...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCAGCCACAGGTGTTTaGCATCGGGGGTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHPATGV*HRGSWR
Trigger: CCTCCATGACCCCCGATGCCAAACACCTGTGGCTGG...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CGTAGCCCTCATCGGCGGCACCGCAGCCGCTGTCCTCGCTGTCGTTGTTGGCCACATGGTTGCAGGTTCTaGAGACAGTGGAGGAGGATC +
Preference number: 4 (lower is better)
Translates to: RSPHRRHRSRCPRCRCWPHGCRF*RQWRRI
Trigger: GATCCTCCTCCACTGTCTCCAGAACCTGCAACCATG...TGGCCAACAACGACAGCGAGGACAGCGGCTGCGGTGCCGCCGATGAGGGCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTAGCTCCCGCATGAGCTaGACCCACAGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASSSRMS*THSRAQ
Trigger: CTGGGCCCGACTGTGGGTTCAGCTCATGCGGGAGCT...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCTTCAGTGGAGGCCGTaGGCGGATAAAGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTLQWRP*ADKVQD
Trigger: ATCCTGGACTTTATCCGCTCACGGCCTCCACTGAAG...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp GCATCTGTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGCTCCGGAGCAGGCGTTaGGGATGCAGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ASVTDRLMQEVDLASPEQLRSRR*GCRAES
Trigger: GCTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAG...CTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp CCACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTGCCTCCCAGGAGGACCGTTTTGAAGTGCGCCTaGACCCAAATGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPRLARPFKQVGVPPRRTVLKCA*TQMSSG
Trigger: CCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAAAC...GGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCCCAGGGAGGGTTTTaGAGTGCGCCTGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHPQGGF*SAPEPK
Trigger: TTTGGGTTCAGGCGCACTTCAAAACCCTCCCTGGGG...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GCTGTCCTCGCTGTCGTTGTTGGCCATGAGGTCGATGAGCCGCTCCAGCTGAGGTCCTCCCGAAGCTTCTaGAGCATCTCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AVLAVVVGHEVDEPLQLRSSRSF*SISLAS
Trigger: GGAGGCCAAGGAGATGCTGCAGAAGCTTCGGGAGGA...CCTCAGCTGGAGCGGCTCATCGACCTCATGGCCAACAACGACAGCGAGGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp GTTGAACTCCTGCTCTTGCACCTTCTTCAGCTTCACTCCGCGGCGGAGCTCCCGCGCCTCTCAGAGACCTaGTTCAGTGGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: VELLLLHLLQLHSAAELPRLSET*FSGGRE
Trigger: CTCACGGCCTCCACTGAAGCAGGTCTCTGAGAGGCG...CGGGAGCTCCGCCGCGGAGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp GTTGAACTCCTGCTCTTGCACCTTCTTCAGCTTCACTCCGCGGCGGAGCTCCCGCGCAGCCTCCGCTCCTaGTTGATCTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: VELLLLHLLQLHSAAELPRSLRS*LISSRI
Trigger: GATCCTGGAGGAGATCAAGCAGGAGCGGAGGCTGCG...CGGGAGCTCCGCCGCGGAGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp TTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGAGGATGCAGGGCAGGGACTGCACGGTCTaGGCTTCCGAGCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: LMQEVDLASPEQALRMQGRDCTV*ASELAS
Trigger: ACTAGCCAGCTCGGAAGCCCAGACCGTGCAGTCCCT...GCCCTGCATCCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCCAGGGACCTTTGCTTTaGTGGCAACGGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRQGPLL*WQRAQP
Trigger: CGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTG...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGCTCGGGGCCGTGGTaGCTCCGTCCCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSSGPW*LRPSWG
Trigger: CCCCCAGGAGGGACGGAGCCACCACGGCCCCGAGCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGCCAGCTCGGGGCCGTaGTGGCTCCGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPASSGP*WLRPSW
Trigger: CCAGGAGGGACGGAGCCACCACGGCCCCGAGCTGGC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGAAGATGTCTCTTCTCTaGATTGGCGCGGTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVKMSLL*IGAVLA
Trigger: TGCCAAAACCGCGCCAATCCAGAGAAGAGACATCTT...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCCACGCTCTGCCACTGTaGCCCTTGCAGAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTHALPL*PLQRLK
Trigger: TTTCAGTCTCTGCAAGGGCCACAGTGGCAGAGCGTG...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCCCACGCTCTTGCGGCTaGAACGCACCACGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFPRSCG*NAPRLP
Trigger: TGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGG...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCAGGAGGCCTGGCCACCTaGGGCTGTCACTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPAGGLAT*GCHLKS
Trigger: TGACTTCAAGTGACAGCCCCAGGTGGCCAGGCCTCC...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTGCCTCCCAGGAGGACCGGACGGAGAAGAGCATaGGAACATGGGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PPRLARPFKQVGVPPRRTGRRRA*EHGMQS
Trigger: AGACTGCATCCCATGTTCCCATGCTCTTCTCCGTCC...GGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGACACACAGCCTCTTTTaGTCTGTGTCACACCCACCC +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRTHSLF*SVSHPP
Trigger: GGGTGGGTGTGACACAGACCAAAAGAGGCTGTGTGT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR TCA 90 bp CTCGTGAGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCATCCACCATGACCTTCTTCAGTGGAGGCCGTaGGCGGATAAAGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVSVLLHPGRDVPIHHDLLQWRP*ADKVQD
Trigger: ATCCTGGACTTTATCCGCTCACGGCCTCCACTGAAG...AAGGTCATGGTGGATGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTGGGCCAGGGGCGAGTaGGGACAGCACCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASWARGE*GQHQNV
Trigger: CACATTCTGGTGCTGTCCTCACTCGCCCCTGGCCCA...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGGCCTGGGCAAAGGTaGGCACGCTGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPWPGQR*ARCGGR
Trigger: GCGTCCCCCGCAGCGTGCGCACCTTTGCCCAGGCCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCAGCTGGGCCAGGTCATaGTCTGAGAAGGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRSWARS*SEKERS
Trigger: GGACCGCTCCTTCTCAGAGCATGACCTGGCCCAGCT...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCGGGCCTCCACACATaGGCACTGCCAGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPGLHT*ALPARG
Trigger: GCCCCGAGCTGGCAGTGCGCATGTGTGGAGGCCCGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTGCCTCCTCCACGCTCTaGCACTGTGGCCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVASSTL*HCGPCR
Trigger: TCTGCAAGGGCCACAGTGGCAGAGCGTGGAGGAGGC...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTGGACGTCCACGCTCTTaGGGCTGGAACGCACCACGT +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVGRPRS*GWNAPR
Trigger: ACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTCC...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCCTAGTGGCACGACCATaGTTGCAGGTTCCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFLVARP*LQVPRP
Trigger: AGGCCGCGGAACCTGCAACCATGGTCGTGCCACTAG...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp CCGCTCCTGCTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTGGCACAGCCGCATGGCCTaGGCAAAGGTGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: PLLLDLLQDLLMQGPLLWHSRMA*AKVRTL
Trigger: CAGCGTGCGCACCTTTGCCCAGGCCATGCGGCTGTG...CCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAGGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGGCCTCCCGGACCCTaGCCAGGAAGGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPWPPGP*PGRPAA
Trigger: AGCTGCGGGCCTTCCTGGCCAGGGTCCGGGAGGCCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCTGCAGGAGGTGGACTTaGCATCTCCGGAGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRCRRWT*HLRSRR
Trigger: ACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCA...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGCGGGACAGGTACCCTaGTCTCGGGAGCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPAGQVP*SREPGL
Trigger: GAGGCCCGGCTCCCGAGACCAGGGTACCTGTCCCGC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCCTGGCGACTGCGTCGTaGCGTAGTGTTGAGGACGTC +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFLATAS*RSVEDV
Trigger: GACGTCCTCAACACTACGCCACGACGCAGTCGCCAG...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACGAGGCAGGACACATGTaGTTTGGACCCCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHEAGHM*FGPQGK
Trigger: CTTTCCCTGGGGTCCAAACCACATGTGTCCTGCCTC...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CAA 72 bp GCATCTGTGACTGACAGGTTGATGCAGGAGGTGGACTaGGCATCTCCGGAGCAGGCGTTGAGGATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ASVTDRLMQEVD*ASPEQALRMQG
Trigger: GCCCTGCATCCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGCGGAGCTCCCGCATaGGCTGAACCCACAGTCGGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPGGAPA*AEPTVG
Trigger: CCCGACTGTGGGTTCAGCTCATGCGGGAGCTCCGCC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCTCCGGAGCAGGCGTTaGGGATGCAGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCLRSRR*GCRAES
Trigger: GCTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAG...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCACCCAGCATCTGTGACTaGCAGGTTGATGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPAPSICD*QVDAGG
Trigger: ACCTCCTGCATCAACCTGTCAGTCACAGATGCTGGG...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp GGGGTTGAACTCCTGCTCTTGCACCTTCTTCAGCTTCACTCCGCGGCGGAGCTCCCCAGCATCTGTGACTaGCAGGTTGATGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GVELLLLHLLQLHSAAELPSICD*QVDAGG
Trigger: ACCTCCTGCATCAACCTGTCAGTCACAGATGCTGGG...GAGCTCCGCCGCGGAGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACGGCCCTTGCAGAGACTaGAAGATGTCTCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHGPCRD*KMSLLW
Trigger: CCAGAGAAGAGACATCTTTCAGTCTCTGCAAGGGCC...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCCTGGGGCTGTCACTTaGAGTCAAGAGTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPPGAVT*SQESWC
Trigger: ACACCAGGACTCTTGACTTCAAGTGACAGCCCCAGG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGTCCTGGCCAACATGGTaGAACCCCACTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRSWPTW*NPTSTK
Trigger: TTTAGTAGAAGTGGGGTTTCACCATGTTGGCCAGGA...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTGGTAATGCGCCTGTaGGCCCCGGGGGTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLVMRL*APGVGQ
Trigger: CTGACCGACCCCCGGGGCGCACAGGCGCATTACCAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCTCATGCAGGGACCTTTaGTTTGGTGGCAACGGGCGC +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFSCRDL*FGGNGR
Trigger: GCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGA...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGGTGGGTGGCCGACTaGAGGCCAGAGGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPGWVAD*RPEATS
Trigger: TGAGGTGGCCTCTGGCCTGCAGTCGGCCACCCACCC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCTGCAGACGGCTCTCTTaGAGAAGAGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFCRRLS*RRDSWA
Trigger: CGCCCAGCTGTCTCTTCTGCAAGAGAGCCGTCTGCA...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCTTCCCAGATGCCTCTaGTGCCTGAGTCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPLPRCL*CLSPHK
Trigger: TTTGTGGGGACTCAGGCAGCAGAGGCATCTGGGAAG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCCAGAGACTTCCCAGATaGCTCTGCTGCCTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRQRLPR*LCCLSP
Trigger: GGGACTCAGGCAGCAGAGGCATCTGGGAAGTCTCTG...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCGCGCACAGCCGCATaGCCTGGGCAAAGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPRTAA*PGQRCA
Trigger: TGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCTGCCTCCTGGAGGCCTaGCCACCTGGGGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCCLLEA*PPGAVT
Trigger: AGTGACAGCCCCAGGTGGCCAGGCCTCCAGGAGGCA...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GATCTGGAGGTGGGTTGTGGGCACTCCCTCAGATTCTCGGCCCCCGGTCCGCTGACAGGTGGATCATCCTaGGTTTCTGACCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: DLEVGCGHSLRFSAPGPLTGGSS*VSDLFN
Trigger: GTTGAAGAGGTCAGAAACCCAGGATGATCCACCTGT...CAGCGGACCGGGGGCCGAGAATCTGAGGGAGTGCCCACAACCCACCTCCAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTACGCCTGCTCCTCGTTaGGCGGCTGCTCGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPTPAPR*AAARRP
Trigger: AGGCCTACGAGCAGCCGCTCAACGAGGAGCAGGCGT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGCTCCAGCTGAGGGCTaGGTTCGCGCTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPAPAEG*VRAPRS
Trigger: AGAGCGAGGAGCGCGAACTCAGCCCTCAGCTGGAGC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTATGAGCCGCTCCAGCTaGGGGCTGAGTTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPMSRSS*GLSSRS
Trigger: GGAGCGCGAACTCAGCCCTCAGCTGGAGCGGCTCAT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGCTCCCGCATGAGCTaGACCCACAGTCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSSRMS*THSRAQ
Trigger: CTGGGCCCGACTGTGGGTTCAGCTCATGCGGGAGCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTCCGGAGCAGGCGTTaGGGATGCAGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLRSRR*GCRAES
Trigger: GCTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTCCTGGCAAGGAATCCTaGGAAGAAACAGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVPGKES*EETASP
Trigger: GGGGGAGGCTGTTTCTTCTCAGGATTCCTTGCCAGG...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACGCTTTCTCTCTTCAGTaGGAAAACCCACCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHAFSLQ*ENPPCS
Trigger: GGAACAGGGTGGGTTTTCTCACTGAAGAGAGAAAGC...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGGCACGACCATGGTTaGAGGTTCCGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPWHDHG*RFRGLG
Trigger: CCCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGCGAAGCCGAGGGACTaGACGGTCTGGGCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPAKPRD*TVWASE
Trigger: CTCGGAAGCCCAGACCGTGCAGTCCCTCGGCTTCGC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCTCCAGGATCTTCTCATaGAGGGACCTTTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EASRALWSSWEPRYPVPTSRIFS*RDLCFG
Trigger: ACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGA...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp AGATTCTCGGCCCCCGGTCCGCTGCAGTCGGCAGAATCACGGCCCCTAAAGCTGTCCAGGATCTTCTCATaGAGGGACCTTTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RFSAPGPLQSAESRPLKLSRIFS*RDLCFG
Trigger: ACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGA...CAGCTTTAGGGGCCGTGATTCTGCCGACTGCAGCGGACCGGGGGCCGAGAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCCACACATGCGCACTaGCAGCTCGGGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSTHAH*QLGAVV
Trigger: CACCACGGCCCCGAGCTGGCAGTGCGCATGTGTGGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPARGR*RSRGTA
Trigger: TGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCACAGCCGCATGGCCTaGGCAAAGGTGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPHSRMA*AKVRTL
Trigger: CAGCGTGCGCACCTTTGCCCAGGCCATGCGGCTGTG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCGAAGGGCGTGAGCTaGAACTCGGTGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSKGVS*NSVGRG
Trigger: CCCCCTCCCCACCGAGTTCCAGCTCACGCCCTTCGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTACCTCACTTCGGAGCTaGGCCAGGTCATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVTSLRS*ARSCSE
Trigger: CTCAGAGCATGACCTGGCCCAGCTCCGAAGTGAGGT...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTTTGCTGAGTAGGGGGTaGCTGGGGTCAGAGACACTC +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVLLSRG*LGSETL
Trigger: GAGTGTCTCTGACCCCAGCCACCCCCTACTCAGCAA...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGGCATCGGGGGTCATaGAGGCCTCGGGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPWHRGS*RPRVCP
Trigger: GGGACAGACCCGAGGCCTCCATGACCCCCGATGCCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCGTCTGCCACAAAGCTaGTGCACTCACTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPRLPQS*CTHCRH
Trigger: ATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGCCTCCTGGAGGCCTaGCCACCTGGGGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPCLLEA*PPGAVT
Trigger: AGTGACAGCCCCAGGTGGCCAGGCCTCCAGGAGGCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGATACAGGGCCTGCCTaGTGCCTCCTGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPDTGPA*CLLEAW
Trigger: CCAGGCCTCCAGGAGGCACCAGGCAGGCCCTGTATC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTGCACTCTGGTCCAGCTaGGAGCCAAGATACCCTGTC +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVALWSS*EPRYPV
Trigger: GACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGC...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGAGGTTCTGGAGACAGTaGAGGAGGATCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTDRLMQEVDLASPEQALRFWRQ*RRIWRW
Trigger: CCACCTCCAGATCCTCCTCCACTGTCTCCAGAACCT...CAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
3UTR CAA 72 bp CTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTaGCTTTGGTGGCAACGGGCGCAGCCGCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LDLLQDLLMQGP*LWWQRAQPPLR
Trigger: TCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR TCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATAGGCGGAGCTCCCGCATaGGCTGAACCCACAGTCGGG +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYIGGAPA*AEPTVG
Trigger: CCCGACTGTGGGTTCAGCTCATGCGGGAGCTCCGCC...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCGGTGGGGAGGGGGTTaGACTCCTGCTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRWGGG*TPALAP
Trigger: AGGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGCATCTCGAAGGGCGTaGGCTGGAACTCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPASRRA*AGTRWG
Trigger: TCCCCACCGAGTTCCAGCTCACGCCCTTCGAGATGC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCAGAGCGTCCTAGCCTaGTACAGGGCCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPQSVLA*YRACLV
Trigger: CACCAGGCAGGCCCTGTATCAGGCTAGGACGCTCTG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCGGGCCCGGATGTCCTaGATCAGCATCTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRARMS*ISISKG
Trigger: GCCCTTCGAGATGCTGATGCAGGACATCCGGGCCCG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCGCAGCCTCCGCTCCTaGTTGATCTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCRSLRS*LISSRI
Trigger: GATCCTGGAGGAGATCAAGCAGGAGCGGAGGCTGCG...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGCCTCCTCCACGCTCTaGCACTGTGGCCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPASSTL*HCGPCR
Trigger: TCTGCAAGGGCCACAGTGGCAGAGCGTGGAGGAGGC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCAGCTGGTGCACTCACTaGAGACATCCTTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFSWCTH*RHPSGH
Trigger: GTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCT...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGACGTCCACGCTCTTaGGGCTGGAACGCACCACGT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPGRPRS*GWNAPR
Trigger: ACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTCC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCACAGATTTACAGAGCTaGTCCTCCCTGTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRTDLQS*SSLCQD
Trigger: GTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGT...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GCATCTGTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGTGGCACGACCATGGTTaGAGGTTCTGGAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: ASVTDRLMQEVDLASPEQWHDHG*RFWRQW
Trigger: CCACTGTCTCCAGAACCTGCAACCATGGTCGTGCCA...CTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCTGCAGCATCTCCTTaGCCTCCCGGACCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSAASP*PPGPWP
Trigger: TGGCCAGGGTCCGGGAGGCCAAGGAGATGCTGCAGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGACCTTTGCTTTGGTaGCAACGGGCGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPGPLLW*QRAQPP
Trigger: AGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCAGGGACCTTTGCTTTaGTGGCAACGGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPQGPLL*WQRAQP
Trigger: CGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGGCTCTCCACGGGGTaGCTGAACTCCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRLSTG*LNSSHR
Trigger: CCTGTGGCTGGAGTTCAGCCACCCCGTGGAGAGCCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTGGATTGGCGCGGTTTTaGCAGCTGATACCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVGLARF*QLIPSE
Trigger: CTCAGAGGGTATCAGCTGCCAAAACCGCGCCAATCC...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCACGCTCTTGCGGCTaGAACGCACCACGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPRSCG*NAPRLP
Trigger: TGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCCAGGATGAGCTCGTaGGCGTCCTTCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSRMSS*ASFFTR
Trigger: CCGGGTGAAGAAGGACGCTCACGAGCTCATCCTGGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGCCAGGTCATGCTCTaGGAAGGAGCGGTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPGQVML*EGAVPF
Trigger: AAACGGGACCGCTCCTTCTCAGAGCATGACCTGGCC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCGCCTCTCAGAGACCTaGTTCAGTGGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRLSET*FSGGRE
Trigger: CTCACGGCCTCCACTGAAGCAGGTCTCTGAGAGGCG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCGCAGCCTCCGCTCCTaGTTGATCTCCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRSLRS*LISSRI
Trigger: GATCCTGGAGGAGATCAAGCAGGAGCGGAGGCTGCG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGCTGGGCCAGGTCATaGTCTGAGAAGGAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSWARS*SEKERS
Trigger: GGACCGCTCCTTCTCAGAGCATGACCTGGCCCAGCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTTTATGCTACAGGAAGTaGAGACGGCTCTCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPLCYRK*RRLSCR
Trigger: TCTGCAAGAGAGCCGTCTGCACTTCCTGTAGCATAA...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCAATGGGATGCAGTCTGTaGCAGGATCTAGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPAMGCSL*QDLEPS
Trigger: AGAAGGTTCTAGATCCTGGCACAGACTGCATCCCAT...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCCATGGGAACATGGGATaGAGTCTGTGCCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRHGNMG*SLCQDL
Trigger: TAGATCCTGGCACAGACTGCATCCCATGTTCCCATG...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTAGTGGCACGACCATaGTTGCAGGTTCCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLVARP*LQVPRP
Trigger: AGGCCGCGGAACCTGCAACCATGGTCGTGCCACTAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCTGGGCTTCCGAGCTaGCTAGTGGCACGACCATGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSGLPS*LVARPW
Trigger: CCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGGGACTGCACGGTCTaGGCTTCCGAGCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRDCTV*ASELAS
Trigger: ACTAGCCAGCTCGGAAGCCCAGACCGTGCAGTCCCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATACCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYIPARGR*RSRGTA
Trigger: TGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGG...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGCAGGAGGTGGACTTaGCATCTCCGGAGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPCRRWT*HLRSRR
Trigger: ACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCAGCCACAGGTGTTTaGCATCGGGGGTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPATGV*HRGSWR
Trigger: CCTCCATGACCCCCGATGCCAAACACCTGTGGCTGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGCAGAAGAGACAGCTaGGCGGCCACGAGAACAGCG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPCRRDS*AATRTA
Trigger: CGCTGTTCTCGTGGCCGCCCAGCTGTCTCTTCTGCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTGGCGACTGCGTCGTaGCGTAGTGTTGAGGACGTC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLATAS*RSVEDV
Trigger: GACGTCCTCAACACTACGCCACGACGCAGTCGCCAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGAGGCCTGGCCACCTaGGGCTGTCACTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPGGLAT*GCHLKS
Trigger: TGACTTCAAGTGACAGCCCCAGGTGGCCAGGCCTCC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTAACCCAAATGAGCTCTaGGGCCAGGAAACAGTGTAT +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPNPNEL*GQETVY
Trigger: ATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTT...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCAGGACACATGTGGTTTaGACCCCAGGGAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFRTHVV*TPGKGK
Trigger: TTTCCCTTTCCCTGGGGTCCAAACCACATGTGTCCT...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCCTCCCGAAGCTTCTaGAGCATCTCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSSRSF*SISLAS
Trigger: GGAGGCCAAGGAGATGCTGCAGAAGCTTCGGGAGGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTTTGAACTCCTGCTCTTaGACCTTCTTCAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPLNSCS*TFFSFT
Trigger: AGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAA...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCATGCAGGGACCTTTaGTTTGGTGGCAACGGGCGC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSCRDL*FGGNGR
Trigger: GCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGAACGCACCACGTCTaGCACAAAGCTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPGTHHV*HKAGAL
Trigger: GAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACGGATCTAGAACCTTCTaGTTTCTCTCTTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHGSRTF*FLSSVR
Trigger: TCTCACTGAAGAGAGAAAGCAGAAGGTTCTAGATCC...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTCCCAGGAGGACCCTaGCTACTCAGAGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLPGGP*LLRDFP
Trigger: TGGGAAGTCTCTGAGTAGGCAGGGTCCTCCTGGGAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATATCAAACAGGTGGGGGTaGCTCCCAGGAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYISNRWG*LPGGPC
Trigger: GCAGGGTCCTCCTGGGAGGCACCCCCACCTGTTTGA...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATAGGACCTTTGCTTTGGTaGCAACGGGCGCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYIGPLLW*QRAQPP
Trigger: AGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCC...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTACCTCACTTCGGAGCTaGGCCAGGTCATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPTSLRS*ARSCSE
Trigger: CTCAGAGCATGACCTGGCCCAGCTCCGAAGTGAGGT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTTGCTGAGTAGGGGGTaGCTGGGGTCAGAGACACTC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLLSRG*LGSETL
Trigger: GAGTGTCTCTGACCCCAGCCACCCCCTACTCAGCAA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGAACAGCGGGAACTTaGCCCGGCAGCAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRTAGT*PGSSSK
Trigger: TTTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCACGCTCTGCCACTGTaGCCCTTGCAGAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPHALPL*PLQRPL
Trigger: AAGAGGTCTCTGCAAGGGCCACAGTGGCAGAGCGTG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGTCCCCATCCACCATaGCCTTGCGCAGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPCPHPP*PCAACS
Trigger: ACTACAAGCTGCGCAAGGTCATGGTGGATGGGGACA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTTCAGTGGAGGCCGTaGGCGGATAAAGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLQWRP*ADKVQD
Trigger: ATCCTGGACTTTATCCGCTCACGGCCTCCACTGAAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCCAGCATCTGTGACTaGCAGGTTGATGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPSICD*QVDAGG
Trigger: ACCTCCTGCATCAACCTGTCAGTCACAGATGCTGGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCTGGGGCTGTCACTTaGAGTCAAGAGTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPGAVT*SQESWC
Trigger: ACACCAGGACTCTTGACTTCAAGTGACAGCCCCAGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATAGCGCCTGAACCCAAATaGGCTCTGGGGCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYIAPEPK*ALGPGN
Trigger: GTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGC...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACATGTATATATGTACATaGACAGCTCAGAGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHMYICT*TAQSVL
Trigger: TAGGACGCTCTGAGCTGTGCATGTACATATATACAT...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTTGCAGAGACCTCTTaGAGAAGAGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLAETS*RRDSWA
Trigger: CGCCCAGCTGTCTCTTCTGCAAGAGGTCTCTGCAAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTGCCACTGTGGCCCTTaGAGAGACCTCTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPCHCGP*RDLLQK
Trigger: CTTCTGCAAGAGGTCTCTGCAAGGGCCACAGTGGCA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393062.6
CDS-3UTR GCA 90 bp GCATCTGTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGTTGAACTCCTGCTCTTaGACCTTCTTCAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: ASVTDRLMQEVDLASPEQLNSCS*TFFSFT
Trigger: AGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAA...CTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGGGGGTTGAACTCCTaGTCTTGCACCTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRGLNS*SCTFFS
Trigger: GCTGAAGAAGGTGCAAGAGCAGGAGTTCAACCCCCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTGCATCTTCATCTTTATaGTACAGGAAGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: VRTAPECGRARRGRTHVVASSSL*YRKCRR
Trigger: CCGTCTGCACTTCCTGTAGCATAAAGATGAAGATGC...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGCTGGTGCACTCACTaGAGACATCCTTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSWCTH*RHPSGH
Trigger: GTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTGCCACAAAGCTGGTaGACTCACTGCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLPQSW*THCRHP
Trigger: AGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTGGGATTACAGGTTCCTaGCACTATACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASGITGS*HYTWLI
Trigger: AATTAGCCAGGTATAGTGGCAGGAACCTGTAATCCC...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCCAAGAGTGGCCATGTaGACAGATTTACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCPRVAM*TDLQSC
Trigger: GCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGG...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCGTCTGCCACAAAGCTaGTGCACTCACTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRLPQS*CTHCRH
Trigger: ATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR TCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATATGTCCCCATCCACCATaGCCTTGCGCAGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYICPHPP*PCAACS
Trigger: ACTACAAGCTGCGCAAGGTCATGGTGGATGGGGACA...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR TCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCTTCTTCAGACTGCTaGAGAGCTCCTTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPSSDC*RAPCSA
Trigger: TGCAGAACAAGGAGCTCTTCAGCAGTCTGAAGAAGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATACACCTAGACGTCCACTaGGGAAGGGAAACTGCCGTT +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYIHLDVH*GRETAV
Trigger: AACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTG...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CCA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTTATTAGGCCAAGAGTaGCCATGTGCACAGATTTAC +
Preference number: 4 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASLLGQE*PCAQIY
Trigger: GTAAATCTGTGCACATGGCCACTCTTGGCCTAATAA...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCCAGGATCTTCTCATaGAGGGACCTTTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSRIFS*RDLCFG
Trigger: ACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATACTGCCACAAAGCTGGTaGACTCACTGCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYILPQSW*THCRHP
Trigger: AGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAG...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTTGAACTCCTGCTCTTaGACCTTCTTCAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLNSCS*TFFSFT
Trigger: AGTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAAGAGCTCCTTGTTCTaGAAAAACTTTTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPKSSLF*KNFSIS
Trigger: CGAGATGGAAAAGTTTTTGCAGAACAAGGAGCTCTT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTATGTATATATGTACATaGACAGCTCAGAGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPMYICT*TAQSVL
Trigger: TAGGACGCTCTGAGCTGTGCATGTACATATATACAT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR GCA 90 bp TTTGAAGTGCGCCTGAACCCAAATGAGCTCTGGGGCCAGGAAACAGTGTATATAAAGAGCTCCTTGTTCTaGAAAAACTTTTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: FEVRLNPNELWGQETVYIKSSLF*KNFSIS
Trigger: CGAGATGGAAAAGTTTTTGCAGAACAAGGAGCTCTT...TATATACACTGTTTCCTGGCCCCAGAGCTCATTTGGGTTCAGGCGCACTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378247.8
3UTR CAA 72 bp TTTTTAAATTATCAACAACAGAACACACAGCCTCTTTaGGTCTGTGTCACACCCACCCTGGGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: FLNYQQQNTQPL*VCVTPTLGIPP
Trigger: TGGTGGTATACCCAGGGTGGGTGTGACACAGACCAAAAGAGGCTGTGTGTTCTGTTGTTGATAATTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS GCA 90 bp CTCGCGGGACAGGTACCCTGGTCTCGGGAGCCGGGCCTCCACACATaGGCACTGCCAGCTCGGGGCCGTGGTGGCTCCGTCCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LAGQVPWSREPGLHT*ALPARGRGGSVPPG
Trigger: CCCAGGAGGGACGGAGCCACCACGGCCCCGAGCTGGCAGTGCGCATGTGTGGAGGCCCGGCTCCCGAGACCAGGGTACCTGTCCCGCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS CCA 90 bp CGCGCTCCTCGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCACGGTCTGCGGGACAGGGGCGCGGT +
Preference number: 5 (lower is better)
Translates to: RAPRSRPAPSPARGR*RSRGTARSAGQGRG
Trigger: ACCGCGCCCCTGTCCCGCAGACCGTGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCGAGGAGCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569108.5
CDS-3UTR CAA 90 bp ATGCGCCTGTGCGCCCCGGGGGTCGGTCAGCCGCGCCGCGCACAGCCGCATGGCATGCAGGAGGTGGACTaGGCATCTCCGGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: MRLCAPGVGQPRRAQPHGMQEVD*ASPEQA
Trigger: CGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCAT...GCCATGCGGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGCGCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS CCA 90 bp CACATGCGCACTGCCAGCTCGGGGCCGTGGTGGCTCCGTCCCTCCTaGGGGGTGGGTGGCCGACTGCAGGCCAGAGGCCACCTCACTTCG +
Preference number: 5 (lower is better)
Translates to: HMRTASSGPWWLRPS*GVGGRLQARGHLTS
Trigger: CGAAGTGAGGTGGCCTCTGGCCTGCAGTCGGCCACCCACCCCCCAGGAGGGACGGAGCCACCACGGCCCCGAGCTGGCAGTGCGCATGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS GCA 90 bp GGGGAAGTGACCATGACACGGGCCCACTCTGGAGTCGGAAGAGCCTaGCAGGCCCACCCGGAGGGAGTGCTGCTCCCAGGGGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GEVTMTRAHSGVGRA*QAHPEGVLLPGGSG
Trigger: CCCAGAGCCCCCTGGGAGCAGCACTCCCTCCGGGTGGGCCTGGCAGGCTCTTCCGACTCCAGAGTGGGCCCGTGTCATGGTCACTTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS TCA 90 bp CCCGGGCTGGCACACAGGCAAGAGGAAGCCAGCCCGCCTCACCCGTaGCGCAGACGCACTGGGACACCTCCCAGGCTGGCCACAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PGLAHRQEEASPPHP*RRRTGTPPRLATGR
Trigger: TCTTCCTGTGGCCAGCCTGGGAGGTGTCCCAGTGCGTCTGCGTCACGGGTGAGGCGGGCTGGCTTCCTCTTGCCTGTGTGCCAGCCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS CCA 90 bp CAGACGCACTGGGACACCTCCCAGGCTGGCCACAGGAAGACGTGCTaGGACACCTCCCAGGCTGGCTACAGGACAGCACCAGGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: QTHWDTSQAGHRKTC*DTSQAGYRTAPGPG
Trigger: CCCGGGGCCTGGTGCTGTCCTGTAGCCAGCCTGGGAGGTGTCCCAGCACGTCTTCCTGTGGCCAGCCTGGGAGGTGTCCCAGTGCGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS GCA 90 bp ACGCAGACGCACTGGGACACCTCCCAGGCTGGCCACAGGAAGACGTaGTGGGACACCTCCCAGGCTGGCTACAGGACAGCACCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: TQTHWDTSQAGHRKT*WDTSQAGYRTAPGP
Trigger: GGGGCCTGGTGCTGTCCTGTAGCCAGCCTGGGAGGTGTCCCAGCACGTCTTCCTGTGGCCAGCCTGGGAGGTGTCCCAGTGCGTCTGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS-3UTR CAA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGGTGGCACGACCATGGTaGCAGGTTCCGCGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRVARPW*QVPRPR
Trigger: CCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCAC...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR CAA 90 bp GGCCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGCCTGGTAATGTCGGTGGGGAGGGGGTaGAACTCCTGCTCTTGCACC +
Preference number: 5 (lower is better)
Translates to: GPQLQRLHEERAAHGLVMSVGRG*NSCSCT
Trigger: GGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGA...CATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS CCA 90 bp AAGCGGGACCTGTGGTGGGGAAGTGACCATGACACGGGCCCACTCTaGAGTCGGAAGAGCCTGCCAGGCCCACCCGGAGGGAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: KRDLWWGSDHDTGPL*SRKSLPGPPGGSAA
Trigger: AGCAGCACTCCCTCCGGGTGGGCCTGGCAGGCTCTTCCGACTCCAGAGTGGGCCCGTGTCATGGTCACTTCCCCACCACAGGTCCCGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS-3UTR CAA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGGTGCAGACGGCTCTCTaGCAGAAGAGACAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVVQTAL*QKRQLG
Trigger: GCCCAGCTGTCTCTTCTGCAAGAGAGCCGTCTGCAC...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp TGGCCAGGAAGGCCCGCAGCTCCAGCGTCTCCACGAAGAGCGCGCGGCACACGGGGATCTGGAGGTGGGTaGTGGGCACTCCCTCAGATT +
Preference number: 5 (lower is better)
Translates to: WPGRPAAPASPRRARGTRGSGGG*WALPQI
Trigger: AATCTGAGGGAGTGCCCACAACCCACCTCCAGATCC...CCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCCTTCCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CAA 90 bp GTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGGCCAAGGTAGGCGCCTaGAGCAGCACGCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VTDRLMQEVDLASPEQALAKVGA*SSTRGR
Trigger: GCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGC...CAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CAA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCCCGAGGAGCCCCGGTaGCTGAGTAGGGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPPEEPR*LSRGWL
Trigger: CAGCCACCCCCTACTCAGCAACCGGGGCTCCTCGGG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGAGGCAGGAGAATTGCTaGAACCCGGGAGGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRRQENC*NPGGGG
Trigger: ACCGCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS GCA 90 bp GACTGCAGGCCAGAGGCCACCTCACTTCGGAGCTGGGCCAGGTCATaGTCTGAGAAGGAGCGGTCCCGTTTCAGCGTCACCTCCCCACAC +
Preference number: 5 (lower is better)
Translates to: DCRPEATSLRSWARS*SEKERSRFSVTSPH
Trigger: GTGTGGGGAGGTGACGCTGAAACGGGACCGCTCCTTCTCAGAGCATGACCTGGCCCAGCTCCGAAGTGAGGTGGCCTCTGGCCTGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS-3UTR CAA 90 bp CCACCACGCCTGGCCAGACCTTTCAAACAGGTGGGGGTGCCTCCCAGGAGGACCCTCATGCAGGGACCTTaGCTTTGGTGGCAACGGGCG +
Preference number: 5 (lower is better)
Translates to: PPRLARPFKQVGVPPRRTLMQGP*LWWQRA
Trigger: CGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAG...GGTCCTCCTGGGAGGCACCCCCACCTGTTTGAAAGGTCTGGCCAGGCGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCATGCAGGAGGTGGACTaGGCATCTCCGGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: EASRALWSSWEPRYPVPTMQEVD*ASPEQA
Trigger: CGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCAT...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCGTGGCACGACCATGGTaGCAGGTTCCGCGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFVARPW*QVPRPR
Trigger: CCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCAC...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp ATCTCTTCCATTTCAGCCAAGGTAGGCGCCTTGAGCAGCACGCGGGGCCGCGGGCTCATGCAGGGACCTTaGCTTTGGTGGCAACGGGCG +
Preference number: 5 (lower is better)
Translates to: ISSISAKVGALSSTRGRGLMQGP*LWWQRA
Trigger: CGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAG...CCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CAA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCAGGGATGTAGAGGGATaGGGTCTGGCGACTGCGTCG +
Preference number: 5 (lower is better)
Translates to: EASRALWSSWEPRYPVPTRDVEG*GLATAS
Trigger: CGACGCAGTCGCCAGACCCAATCCCTCTACATCCCT...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS CCA 90 bp AGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGGTGCCTCCTaGAGGCCTGGCCACCTGGGGCTGTCACTTGAAGTCAAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: SSERPSLIQGLPGAS*RPGHLGLSLEVKSP
Trigger: AGGACTCTTGACTTCAAGTGACAGCCCCAGGTGGCCAGGCCTCCAGGAGGCACCAGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS-3UTR CAA 90 bp AGATTCTCGGCCCCCGGTCCGCTGCAGTCGGCAGAATCACGGCCCCTAAAGCTGCTGTCCTCGCTGTCGTaGTTGGCCATGAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: RFSAPGPLQSAESRPLKLLSSLS*LAMRSM
Trigger: CATCGACCTCATGGCCAACAACGACAGCGAGGACAG...CAGCTTTAGGGGCCGTGATTCTGCCGACTGCAGCGGACCGGGGGCCGAGAATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CAA 90 bp CCCTGTGCCAGGACCGCCCAGCATCTTCAGGAGCCTCTGGGCCAGGGGCGAGTGGTTGAACTCCTGCTCTaGCACCTTCTTCAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: PCARTAQHLQEPLGQGRVVELLL*HLLQLH
Trigger: GTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAAC...CACTCGCCCCTGGCCCAGAGGCTCCTGAAGATGCTGGGCGGTCCTGGCACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCGCCAAGGTAGGCGCCTaGAGCAGCACGCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCAKVGA*SSTRGR
Trigger: GCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGC...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGTGTAGTCCCAGCTACTaGAGAGGCTGGCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRCSPSY*RGWPGE
Trigger: TTCTCCTGGCCAGCCTCTCAAGTAGCTGGGACTACA...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS GCA 90 bp TCTGGAAGGTCCAGGACCCTCCAACAGGCCACCTCAGCTTGCATCTaGCCATCTGCGCTCAGCACACCTCCCGTGTCCTGGCCACTGATT +
Preference number: 5 (lower is better)
Translates to: SGRSRTLQQATSACI*PSALSTPPVSWPLI
Trigger: AATCAGTGGCCAGGACACGGGAGGTGTGCTGAGCGCAGATGGGCAGATGCAAGCTGAGGTGGCCTGTTGGAGGGTCCTGGACCTTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS GCA 90 bp GGAAGCCCTGGACAGCAGGCGGGCTGGGTCAGCGAGCAGGACCCGTaGGGTATGGTGAAGAGAGACACACGCTGCGATTCTTTGTTACTG +
Preference number: 5 (lower is better)
Translates to: GSPGQQAGWVSEQDP*GMVKRDTRCDSLLL
Trigger: CAGTAACAAAGAATCGCAGCGTGTGTCTCTCTTCACCATACCGCACGGGTCCTGCTCGCTGACCCAGCCCGCCTGCTGTCCAGGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS CCA 90 bp CGTCCACGCTCTTGCGGCTGGAACGCACCACGTCTGCCACAAAGCTaGTGCACTCACTGCAGACATCCTTCAGGACACAGCCGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: RPRSCGWNAPRLPQS*CTHCRHPSGHSRGS
Trigger: ACTCCCACGGCTGTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CCA 90 bp CCTGGTGTTAGGGATGTAGAGGGATTGGGTCTGGCGACTGCGTCGTaGCGTAGTGTTGAGGACGTCCACGCTCTTGCGGCTGGAACGCAC +
Preference number: 5 (lower is better)
Translates to: PGVRDVEGLGLATAS*RSVEDVHALAAGTH
Trigger: GTGCGTTCCAGCCGCAAGAGCGTGGACGTCCTCAACACTACGCCACGACGCAGTCGCCAGACCCAATCCCTCTACATCCCTAACACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS-3UTR CAA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCTCGGTGGGGAGGGGGTaGAACTCCTGCTCTTGCACC +
Preference number: 5 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFSVGRG*NSCSCT
Trigger: GGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGA...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGCCAAGGTAGGCGCCTaGAGCAGCACGCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPAKVGA*SSTRGR
Trigger: GCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCGAGAACAGCGGGAACTaGGCCCGGCAGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRENSGN*ARQQQQ
Trigger: TTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCTC...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp CCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCATTCCTCGTCGTGGCGTAGTGTaGAGGACGTCCACGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PCPHLDVHWGRETAVRIPRRGVV*RTSTLL
Trigger: CAAGAGCGTGGACGTCCTCAACACTACGCCACGACG...AGGAATGCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp CCCAGCTACTTGAGAGGCTGGCCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGAACACACAGCCTCTTTaGGTCTGTGTCACACCCACC +
Preference number: 5 (lower is better)
Translates to: PSYLRGWPGEWREPGRRRNTQPL*VCVTPT
Trigger: GGTGGGTGTGACACAGACCAAAAGAGGCTGTGTGTT...CCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCCAGCCTCTCAAGTAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS-3UTR CAA 90 bp CGGTCTGGGCTTCCGAGCTGGCTAGTGGCACGACCATGGTTGCAGGTTCTGGAGAGCTTACAGTGGCAGTaGAGGGTCCAGGTGCTGACC +
Preference number: 5 (lower is better)
Translates to: RSGLPSWLVARPWLQVLESLQWQ*RVQVLT
Trigger: GGTCAGCACCTGGACCCTCAACTGCCACTGTAAGCT...CTCCAGAACCTGCAACCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS TCA 90 bp CGAGAGGAGCTTACAGTGGCAGTTGAGGGTCCAGGTGCTGACCCCTaGCAGGTGGATCATCCTGGGTTTCTGACCTCTTCAACCGCGGCC +
Preference number: 5 (lower is better)
Translates to: REELTVAVEGPGADP*QVDHPGFLTSSTAA
Trigger: GGCCGCGGTTGAAGAGGTCAGAAACCCAGGATGATCCACCTGTCAGGGGTCAGCACCTGGACCCTCAACTGCCACTGTAAGCTCCTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS TCA 90 bp TGGATCCCAAGGGGTGCAAGACTGAGCCAGGCTGGGCTTGATCTCTaGAAGGGAACTCACGACAGATCTGAGGGAAGGGTTCCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: WIPRGARLSQAGLDL*KGTHDRSEGRVPAR
Trigger: CCGGGCCGGAACCCTTCCCTCAGATCTGTCGTGAGTTCCCTTTCAGAGATCAAGCCCAGCCTGGCTCAGTCTTGCACCCCTTGGGATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS GCA 90 bp TGCGGCTGGAACGCACCACGTCTGCCACAAAGCTGGTGCACTCACTaGAGACATCCTTCAGGACACAGCCGTGGGAGTAGATGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: CGWNAPRLPQSWCTH*RHPSGHSRGSRCGG
Trigger: TCCCCCACATCTACTCCCACGGCTGTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS GCA 90 bp CCACGCTCTTGCGGCTGGAACGCACCACGTCTGCCACAAAGCTGGTaGACTCACTGCAGACATCCTTCAGGACACAGCCGTGGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: PRSCGWNAPRLPQSW*THCRHPSGHSRGSR
Trigger: TCTACTCCCACGGCTGTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS-3UTR CAA 90 bp ATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCTCCGGAGCAGGCGTaGAGGATGCAGGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: MCTDLQSCSSLCQDRPASSPEQA*RMQGRE
Trigger: CTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAGA...AGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACCTCTGTGACTGACAGGTaGATGCAGGAGGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: EASRALWSSWEPRYPVPTSVTDR*MQEVDL
Trigger: CAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGA...GGTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCCCGAGGAGCCCCGGTaGCTGAGTAGGGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPPEEPR*LSRGWL
Trigger: CAGCCACCCCCTACTCAGCAACCGGGGCTCCTCGGG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCTCCAGCCACAGGTGTTaGGCATCGGGGGTCATGGAG +
Preference number: 5 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFSSHRC*ASGVME
Trigger: CTCCATGACCCCCGATGCCAAACACCTGTGGCTGGA...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp AGAGGCAAGCAGGGCACTCTGGTCCAGCTGGGAGCCAAGATACCCTGTCCCCACTGTCTCTTCTCTGGATaGGCGCGGTTTTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RGKQGTLVQLGAKIPCPHCLFSG*ARFWQL
Trigger: CAGCTGCCAAAACCGCGCCAATCCAGAGAAGAGACA...GTGGGGACAGGGTATCTTGGCTCCCAGCTGGACCAGAGTGCCCTGCTTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGTGGCACGACCATGGTaGCAGGTTCCGCGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPVARPW*QVPRPR
Trigger: CCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCAC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCATCTTCTCCTCGCTGTCGTTGTaGGCCATGAGGTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: VHRFTELLLPVPGPPSIFSSLSL*AMRSMS
Trigger: GCTCATCGACCTCATGGCCAACAACGACAGCGAGGA...GAAGATGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp CCGCTCCTGCTTGATCTCCTCCAGGATCTTCTCATGCAGGGACCTTTGCTTTGGTCTCCGGAGCAGGCGTaGAGGATGCAGGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PLLLDLLQDLLMQGPLLWSPEQA*RMQGRE
Trigger: CTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAGA...CCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATCAAGCAGGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CAA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCAACCTGGGGCTGTCACTaGAAGTCAAGAGTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPATWGCH*KSRVLV
Trigger: CACCAGGACTCTTGACTTCAAGTGACAGCCCCAGGT...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS TCA 90 bp TGGTGCCGTTTCCATCTGAACAATTCACCTCAGGTGCCACAGGTGTaGCGCCAACAACGTCCGTGGCCAGGAGACCTCACGCCAGGTACA +
Preference number: 5 (lower is better)
Translates to: WCRFHLNNSPQVPQV*RQQRPWPGDLTPGT
Trigger: TGTACCTGGCGTGAGGTCTCCTGGCCACGGACGTTGTTGGCGTCACACCTGTGGCACCTGAGGTGAATTGTTCAGATGGAAACGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS GCA 90 bp AGTGTTGAGGACGTCCACGCTCTTGCGGCTGGAACGCACCACGTCTaGCACAAAGCTGGTGCACTCACTGCAGACATCCTTCAGGACACA +
Preference number: 5 (lower is better)
Translates to: SVEDVHALAAGTHHV*HKAGALTADILQDT
Trigger: TGTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTCCTCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS CCA 90 bp CCCATCTGCGCTCAGCACACCTCCCGTGTCCTGGCCACTGATTCCTaGGGCCACCTTATGTTGAGTGTGTCCTGTTTTTGCTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PICAQHTSRVLATDS*GHLMLSVSCFCFPV
Trigger: CACAGGGAAGCAAAAACAGGACACACTCAACATAAGGTGGCCCCAGGAATCAGTGGCCAGGACACGGGAGGTGTGCTGAGCGCAGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CCA 90 bp GGCTCCCCTAGCTTACTCTCCTTCCCTGAGGACCCTAACCCTCCCTaGCCTCAGCCTAAACAAGCCTGCGACCTTCTAAAACGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: GSPSLLSFPEDPNPP*PQPKQACDLLKRCP
Trigger: TGGACAGCGTTTTAGAAGGTCGCAGGCTTGTTTAGGCTGAGGCCAGGGAGGGTTAGGGTCCTCAGGGAAGGAGAGTAAGCTAGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS-3UTR CAA 90 bp GTGAGGACAGCACCAGAATGTGGTAGGGCCAGGAGAGGCAGGACACATGTGGTTCTGTCCTCGCTGTCGTaGTTGGCCATGAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: VRTAPECGRARRGRTHVVLSSLS*LAMRSM
Trigger: CATCGACCTCATGGCCAACAACGACAGCGAGGACAG...AACCACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp CTCGTGAGCGTCCTTCTTCACCCGGGGCGGGATGTCCCCATCCACCATGACCTTGTTGAACTCCTGCTCTaGCACCTTCTTCAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LVSVLLHPGRDVPIHHDLVELLL*HLLQLH
Trigger: GTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAAC...AAGGTCATGGTGGATGGGGACATCCCGCCCCGGGTGAAGAAGGACGCTCACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CAA 90 bp TTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGCGTTGAGGATGCAGGGCTCTGTGACTGACAGGTaGATGCAGGAGGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: LMQEVDLASPEQALRMQGSVTDR*MQEVDL
Trigger: CAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGA...GCCCTGCATCCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS-3UTR CAA 90 bp AAGATACCCTGTCCCCACCTAGACGTCCACTGGGGAAGGGAAACTGCCGTTCGCCTGCCACTGTGGCCCTaGCAGAGACTGAAAGATGTC +
Preference number: 5 (lower is better)
Translates to: KIPCPHLDVHWGRETAVRLPLWP*QRLKDV
Trigger: GACATCTTTCAGTCTCTGCAAGGGCCACAGTGGCAG...GCGAACGGCAGTTTCCCTTCCCCAGTGGACGTCTAGGTGGGGACAGGGTATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGGACGTCCACGCTCTaGCGGCTGGAACGCACCACG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRTSTL*RLERTT
Trigger: CGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTCCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GCATCTGTGACTGACAGGTTGATGCAGGAGGTGGACTTGGCATCTCCGGAGCAGGTGGCACGACCATGGTaGCAGGTTCTGGAGACAGTG +
Preference number: 5 (lower is better)
Translates to: ASVTDRLMQEVDLASPEQVARPW*QVLETV
Trigger: CACTGTCTCCAGAACCTGCAACCATGGTCGTGCCAC...CTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566337.5
CDS TCA 90 bp CCACACCAGCCAGAATCCATCTCAAACCTTCCCTCCCTGAGCAGCTaGTGTCCTCTTTTCTGGAAGGTCCAGGACCCTCCAACAGGCCAC +
Preference number: 5 (lower is better)
Translates to: PHQPESISNLPSLSS*CPLFWKVQDPPTGH
Trigger: GTGGCCTGTTGGAGGGTCCTGGACCTTCCAGAAAAGAGGACATCAGCTGCTCAGGGAGGGAAGGTTTGAGATGGATTCTGGCTGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCGGTGGGGAGGGGGTaGAACTCCTGCTCTTGCACC +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSVGRG*NSCSCT
Trigger: GGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCTCCGGAGCAGGCGTaGAGGATGCAGGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSPEQA*RMQGRE
Trigger: CTCTCTGCCCTGCATCCTCAACGCCTGCTCCGGAGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTATGCAGGAGGTGGACTaGGCATCTCCGGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPMQEVD*ASPEQA
Trigger: CGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCAT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGAGAACAGCGGGAACTaGGCCCGGCAGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPENSGN*ARQQQQ
Trigger: TTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCTC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS TCA 90 bp GGGCTGATCCACACCAGCCAGAATCCATCTCAAACCTTCCCTCCCTaGGCAGCTGATGTCCTCTTTTCTGGAAGGTCCAGGACCCTCCAA +
Preference number: 5 (lower is better)
Translates to: GLIHTSQNPSQTFPP*AADVLFSGRSRTLQ
Trigger: TTGGAGGGTCCTGGACCTTCCAGAAAAGAGGACATCAGCTGCTCAGGGAGGGAAGGTTTGAGATGGATTCTGGCTGGTGTGGATCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS TCA 90 bp CCCATGTCTGTTCAAGGTGTCCCTGCCTGCAAACACACCATGGGCTaGTCCACACCAGCCAGAATCCATCTCAAACCTTCCCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PMSVQGVPACKHTMG*STPARIHLKPSLPE
Trigger: CTCAGGGAGGGAAGGTTTGAGATGGATTCTGGCTGGTGTGGATCAGCCCATGGTGTGTTTGCAGGCAGGGACACCTTGAACAGACATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTCATGCAGGGACCTTaGCTTTGGTGGCAACGGGCG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLMQGP*LWWQRA
Trigger: CGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCCAGCCACAGGTGTTaGGCATCGGGGGTCATGGAG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSSHRC*ASGVME
Trigger: CTCCATGACCCCCGATGCCAAACACCTGTGGCTGGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCGTCGTGGCGTAGTGTaGAGGACGTCCACGCTCTTG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRRGVV*RTSTLL
Trigger: CAAGAGCGTGGACGTCCTCAACACTACGCCACGACG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTAGGGATGTAGAGGGATaGGGTCTGGCGACTGCGTCG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPRDVEG*GLATAS
Trigger: CGACGCAGTCGCCAGACCCAATCCCTCTACATCCCT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCCTCGCTGTCGTTGTaGGCCATGAGGTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSSLSL*AMRSMS
Trigger: GCTCATCGACCTCATGGCCAACAACGACAGCGAGGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTGTCCTCGCTGTCGTaGTTGGCCATGAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLSSLS*LAMRSM
Trigger: CATCGACCTCATGGCCAACAACGACAGCGAGGACAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACCGCCCAGCACTGCTGAAGAGCTCCTaGTTCTGCAAAAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: AMCTDLQSCSSLCQDRPALLKSS*FCKNFS
Trigger: GGAAAAGTTTTTGCAGAACAAGGAGCTCTTCAGCAG...TGCTGGGCGGTCCTGGCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp ATTAGGCCAAGAGTGGCCATGTGCACAGATTTACAGAGCTGCTCCTCCCTGTGCCAGGACACATGTGGTTaGGACCCCAGGGAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: IRPRVAMCTDLQSCSSLCQDTCG*DPRERE
Trigger: TTCCCTTTCCCTGGGGTCCAAACCACATGTGTCCTG...GCACAGGGAGGAGCAGCTCTGTAAATCTGTGCACATGGCCACTCTTGGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378247.8
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTGCCACTGTGGCCCTaGCAGAGACCTCTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLPLWP*QRPLAE
Trigger: TTCTGCAAGAGGTCTCTGCAAGGGCCACAGTGGCAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393062.6
CDS TCA 90 bp GCTTTAGGCTTCTGTTGCCAGTTGCCTGATGGTGCCGTTTCCATCTaGACAATTCACCTCAGGTGCCACAGGTGTGACGCCAACAACGTC +
Preference number: 5 (lower is better)
Translates to: ALGFCCQLPDGAVSI*TIHLRCHRCDANNV
Trigger: GACGTTGTTGGCGTCACACCTGTGGCACCTGAGGTGAATTGTTCAGATGGAAACGGCACCATCAGGCAACTGGCAACAGAAGCCTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS TCA 90 bp TTCGCAGTGTCGGTCATCACTGCCAAGGCAGGTGGGCACCATCTATaGAGGTGCCACAGAGATGGAGTTGGACCATGTTTTCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: FAVSVITAKAGGHHL*RCHRDGVGPCFLLW
Trigger: CCAAAGCAGAAAACATGGTCCAACTCCATCTCTGTGGCACCTTCATAGATGGTGCCCACCTGCCTTGGCAGTGATGACCGACACTGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTACCTGGGGCTGTCACTaGAAGTCAAGAGTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPTWGCH*KSRVLV
Trigger: CACCAGGACTCTTGACTTCAAGTGACAGCCCCAGGT...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS CCA 90 bp CACTGCCAAGGCAGGTGGGCACCATCTATGAAGGTGCCACAGAGATaGAGTTGGACCATGTTTTCTGCTTTGGATTTGCAGTGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: HCQGRWAPSMKVPQR*SWTMFSALDLQWVV
Trigger: GACAACCCACTGCAAATCCAAAGCAGAAAACATGGTCCAACTCCATCTCTGTGGCACCTTCATAGATGGTGCCCACCTGCCTTGGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTTCTGTGACTGACAGGTaGATGCAGGAGGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPSVTDR*MQEVDL
Trigger: CAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGA...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS GCA 90 bp GTCAGCGAGCAGGACCCGTGCGGTATGGTGAAGAGAGACACACGCTaGGATTCTTTGTTACTGTATTTAACGTATCTTTTTCCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: VSEQDPCGMVKRDTR*DSLLLYLTYLFPPA
Trigger: GGCCGGAGGAAAAAGATACGTTAAATACAGTAACAAAGAATCGCAGCGTGTGTCTCTCTTCACCATACCGCACGGGTCCTGCTCGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS CCA 90 bp CTTGCAGAGACTGAAAGATGTCTCTTCTCTGGATTGGCGCGGTTTTaGCAGCTGATACCCTCTGAGGACTCTCAAAGCCCAGTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: LAETERCLFSGLARF*QLIPSEDSQSPVCR
Trigger: TCTACACACTGGGCTTTGAGAGTCCTCAGAGGGTATCAGCTGCCAAAACCGCGCCAATCCAGAGAAGAGACATCTTTCAGTCTCTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CCA 90 bp CAAGGCAGGTGGGCACCATCTATGAAGGTGCCACAGAGATGGAGTTaGACCATGTTTTCTGCTTTGGATTTGCAGTGGGTTGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: QGRWAPSMKVPQRWS*TMFSALDLQWVVLS
Trigger: AGACAGGACAACCCACTGCAAATCCAAAGCAGAAAACATGGTCCAACTCCATCTCTGTGGCACCTTCATAGATGGTGCCCACCTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTGTTGAACTCCTGCTCTaGCACCTTCTTCAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPVELLL*HLLQLH
Trigger: GTGAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAAC...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS-3UTR CAA 90 bp GTATATATGTACATGCACAGCTCAGAGCGTCCTAGCCTGATACAGGGCCTGCCTCTGCTGAAGAGCTCCTaGTTCTGCAAAAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: VYMYMHSSERPSLIQGLPLLKSS*FCKNFS
Trigger: GGAAAAGTTTTTGCAGAACAAGGAGCTCTTCAGCAG...AGGCAGGCCCTGTATCAGGCTAGGACGCTCTGAGCTGTGCATGTACATATATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS CCA 72 bp ACTGCCAGCTCGGGGCCGTGGTGGCTCCGTCCCTCCTaGGGGGTGGGTGGCCGACTGCAGGCCAGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: TASSGPWWLRPS*GVGGRLQARGH
Trigger: GTGGCCTCTGGCCTGCAGTCGGCCACCCACCCCCCAGGAGGGACGGAGCCACCACGGCCCCGAGCTGGCAGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS GCA 72 bp CCTGGTCTCGGGAGCCGGGCCTCCACACATGCGCACTaGCAGCTCGGGGCCGTGGTGGCTCCGTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: PGLGSRASTHAH*QLGAVVAPSLL
Trigger: CAGGAGGGACGGAGCCACCACGGCCCCGAGCTGGCAGTGCGCATGTGTGGAGGCCCGGCTCCCGAGACCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS GCA 72 bp CAGGTACCCTGGTCTCGGGAGCCGGGCCTCCACACATaGGCACTGCCAGCTCGGGGCCGTGGTGGCTCCGTC +
Preference number: 6 (lower is better)
Translates to: QVPWSREPGLHT*ALPARGRGGSV
Trigger: GACGGAGCCACCACGGCCCCGAGCTGGCAGTGCGCATGTGTGGAGGCCCGGCTCCCGAGACCAGGGTACCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS CCA 72 bp CGGTCTGGGCTTCCGAGCTGGCTAGTGGCACGACCATaGTTGCAGGTTCCGCGGCCTCGGGCTCCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: RSGLPSWLVARP*LQVPRPRAPAP
Trigger: GGGCGCGGGAGCCCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378247.8
ENST00000393062.6
CDS CCA 72 bp GCAGCTGGGCTTCCGAGCTGGCTAGTGGCACGACCATaGTTGCAGGTTCCGCGGCCTCGGGCTCCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: AAGLPSWLVARP*LQVPRPRAPAP
Trigger: GGGCGCGGGAGCCCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCAGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563972.1
CDS CCA 72 bp CGCTCTCGTCCAGCCCCCAGTCCAGCGCGCGGTAGATaGCGAAGCCGAGGGACTGCACGGTCTGCGGGACAG +
Preference number: 6 (lower is better)
Translates to: RSRPAPSPARGR*RSRGTARSAGQ
Trigger: CTGTCCCGCAGACCGTGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569108.5
CDS TCA 72 bp GCACACAGGCAAGAGGAAGCCAGCCCGCCTCACCCGTaGCGCAGACGCACTGGGACACCTCCCAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: AHRQEEASPPHP*RRRTGTPPRLA
Trigger: GGCCAGCCTGGGAGGTGTCCCAGTGCGTCTGCGTCACGGGTGAGGCGGGCTGGCTTCCTCTTGCCTGTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS GCA 72 bp ACCATGACACGGGCCCACTCTGGAGTCGGAAGAGCCTaGCAGGCCCACCCGGAGGGAGTGCTGCTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: TMTRAHSGVGRA*QAHPEGVLLPG
Trigger: CCCTGGGAGCAGCACTCCCTCCGGGTGGGCCTGGCAGGCTCTTCCGACTCCAGAGTGGGCCCGTGTCATGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS CCA 72 bp CTGTGGTGGGGAAGTGACCATGACACGGGCCCACTCTaGAGTCGGAAGAGCCTGCCAGGCCCACCCGGAGGG +
Preference number: 6 (lower is better)
Translates to: LWWGSDHDTGPL*SRKSLPGPPGG
Trigger: CCCTCCGGGTGGGCCTGGCAGGCTCTTCCGACTCCAGAGTGGGCCCGTGTCATGGTCACTTCCCCACCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561883.1
CDS TCA 72 bp GGCCACCTCACTTCGGAGCTGGGCCAGGTCATGCTCTaGGAAGGAGCGGTCCCGTTTCAGCGTCACCTCCCC +
Preference number: 6 (lower is better)
Translates to: GHLTSELGQVML*EGAVPFQRHLP
Trigger: GGGGAGGTGACGCTGAAACGGGACCGCTCCTTCTCAGAGCATGACCTGGCCCAGCTCCGAAGTGAGGTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS GCA 72 bp CCAGACACCGCGAGGGATCCAGACCATGCGGCGGAATaGGTGGCCATGGGGAGGTCCCAGAGCAGAGACAGA +
Preference number: 6 (lower is better)
Translates to: PDTARDPDHAAE*VAMGRSQSRDR
Trigger: TCTGTCTCTGCTCTGGGACCTCCCCATGGCCACGCATTCCGCCGCATGGTCTGGATCCCTCGCGGTGTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS GCA 72 bp ATGGCTGAACCCAGACACCGCGAGGGATCCAGACCATaGGGCGGAATGCGTGGCCATGGGGAGGTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: MAEPRHREGSRP*GGMRGHGEVPE
Trigger: CTCTGGGACCTCCCCATGGCCACGCATTCCGCCGCATGGTCTGGATCCCTCGCGGTGTCTGGGTTCAGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS CCA 72 bp GTGGCCCTTGCAGAGACCTCTTGCAGAAGAGACAGCTaGGCGGCCACGAGAACAGCGGGAACTTGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: VALAETSCRRDS*AATRTAGTWPG
Trigger: GCCGGGCCAAGTTCCCGCTGTTCTCGTGGCCGCCCAGCTGTCTCTTCTGCAAGAGGTCTCTGCAAGGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393062.6
CDS CAA 72 bp CTCTCCACGGGGTGGCTGAACTCCAGCCACAGGTGTTaGGCATCGGGGGTCATGGAGGCCTCGGGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LSTGWLNSSHRC*ASGVMEASGLS
Trigger: GGACAGACCCGAGGCCTCCATGACCCCCGATGCCAAACACCTGTGGCTGGAGTTCAGCCACCCCGTGGAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS TCA 72 bp GTTCCGGCCCGGGGTGCTCCAGGGTTTCTAGGCTGGTaGCCGACACAGAGGCTGAGCATGGCTGAACCCAGA +
Preference number: 6 (lower is better)
Translates to: VPARGAPGFLGW*PTQRLSMAEPR
Trigger: TCTGGGTTCAGCCATGCTCAGCCTCTGTGTCGGTCACCAGCCTAGAAACCCTGGAGCACCCCGGGCCGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS GCA 72 bp CCAGAGGCCACCTCACTTCGGAGCTGGGCCAGGTCATaGTCTGAGAAGGAGCGGTCCCGTTTCAGCGTCACC +
Preference number: 6 (lower is better)
Translates to: PEATSLRSWARS*SEKERSRFSVT
Trigger: GGTGACGCTGAAACGGGACCGCTCCTTCTCAGAGCATGACCTGGCCCAGCTCCGAAGTGAGGTGGCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000569108.5
CDS GCA 72 bp TCCAGGACCCTCCAACAGGCCACCTCAGCTTGCATCTaGCCATCTGCGCTCAGCACACCTCCCGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRTLQQATSACI*PSALSTPPVSW
Trigger: CCAGGACACGGGAGGTGTGCTGAGCGCAGATGGGCAGATGCAAGCTGAGGTGGCCTGTTGGAGGGTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CCA 72 bp AGGAAGTGCAGACGGCTCTCTTGCAGAAGAGACAGCTaGGCGGCCACGAGAACAGCGGGAACTTGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: RKCRRLSCRRDS*AATRTAGTWPG
Trigger: GCCGGGCCAAGTTCCCGCTGTTCTCGTGGCCGCCCAGCTGTCTCTTCTGCAAGAGAGCCGTCTGCACTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378247.8
ENST00000562029.5
ENST00000569108.5
CDS CAA 72 bp AGGGATTGGGTCTGGCGACTGCGTCGTGGCGTAGTGTaGAGGACGTCCACGCTCTTGCGGCTGGAACGCACC +
Preference number: 6 (lower is better)
Translates to: RDWVWRLRRGVV*RTSTLLRLERT
Trigger: GGTGCGTTCCAGCCGCAAGAGCGTGGACGTCCTCAACACTACGCCACGACGCAGTCGCCAGACCCAATCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS CAA 90 bp GTCTGGCGACTGCGTCGTGGCGTAGTGTTGAGGACGTCCACGCTCTaGCGGCTGGAACGCACCACGTCTGCCACAAAGCTGGTGCACTCA +
Preference number: 6 (lower is better)
Translates to: VWRLRRGVVLRTSTL*RLERTTSATKLVHS
Trigger: TGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTCCTCAACACTACGCCACGACGCAGTCGCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS CAA 72 bp CTGCGTCGTGGCGTAGTGTTGAGGACGTCCACGCTCTaGCGGCTGGAACGCACCACGTCTGCCACAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LRRGVVLRTSTL*RLERTTSATKL
Trigger: CAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTCCTCAACACTACGCCACGACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS CCA 72 bp AGAGACAGCTGGGCGGCCACGAGAACAGCGGGAACTTaGCCCGGCAGCAGCAGCAAATCTTCCCCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: RDSWAATRTAGT*PGSSSKSSPSS
Trigger: TGAAGAAGGGGAAGATTTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCTCGTGGCCGCCCAGCTGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CCA 72 bp AGGGATGTAGAGGGATTGGGTCTGGCGACTGCGTCGTaGCGTAGTGTTGAGGACGTCCACGCTCTTGCGGCT +
Preference number: 6 (lower is better)
Translates to: RDVEGLGLATAS*RSVEDVHALAA
Trigger: AGCCGCAAGAGCGTGGACGTCCTCAACACTACGCCACGACGCAGTCGCCAGACCCAATCCCTCTACATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS CCA 72 bp GATGTGGGGGAACGCCTCCTCCACGCTCTGCCACTGTaGCCCTTGCAGAGACCTCTTGCAGAAGAGACAGCT +
Preference number: 6 (lower is better)
Translates to: DVGERLLHALPL*PLQRPLAEETA
Trigger: AGCTGTCTCTTCTGCAAGAGGTCTCTGCAAGGGCCACAGTGGCAGAGCGTGGAGGAGGCGTTCCCCCACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393062.6
CDS CAA 72 bp AAGAGACAGCTGGGCGGCCACGAGAACAGCGGGAACTaGGCCCGGCAGCAGCAGCAAATCTTCCCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: KRQLGGHENSGN*ARQQQQIFPFF
Trigger: GAAGAAGGGGAAGATTTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCTCGTGGCCGCCCAGCTGTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CAA 90 bp CTCTTGCAGAAGAGACAGCTGGGCGGCCACGAGAACAGCGGGAACTaGGCCCGGCAGCAGCAGCAAATCTTCCCCTTCTTCAGACTGCTG +
Preference number: 6 (lower is better)
Translates to: LLQKRQLGGHENSGN*ARQQQQIFPFFRLL
Trigger: CAGCAGTCTGAAGAAGGGGAAGATTTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCTCGTGGCCGCCCAGCTGTCTCTTCTGCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS TCA 72 bp CATCTGCGCTCAGCACACCTCCCGTGTCCTGGCCACTaGTTCCTGGGGCCACCTTATGTTGAGTGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: HLRSAHLPCPGH*FLGPPYVECVL
Trigger: CAGGACACACTCAACATAAGGTGGCCCCAGGAATCAGTGGCCAGGACACGGGAGGTGTGCTGAGCGCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS GCA 72 bp TGCGGCTGGAACGCACCACGTCTGCCACAAAGCTGGTaGACTCACTGCAGACATCCTTCAGGACACAGCCGT +
Preference number: 6 (lower is better)
Translates to: CGWNAPRLPQSW*THCRHPSGHSR
Trigger: ACGGCTGTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS GCA 72 bp GACGTCCACGCTCTTGCGGCTGGAACGCACCACGTCTaGCACAAAGCTGGTGCACTCACTGCAGACATCCTT +
Preference number: 6 (lower is better)
Translates to: DVHALAAGTHHV*HKAGALTADIL
Trigger: AAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS GCA 72 bp CACTGCCAGCACAGCGTTCGCAGTGTCGGTCATCACTaGCAAGGCAGGTGGGCACCATCTATGAAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: HCQHSVRSVGHH*QGRWAPSMKVP
Trigger: TGGCACCTTCATAGATGGTGCCCACCTGCCTTGGCAGTGATGACCGACACTGCGAACGCTGTGCTGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS TCA 72 bp CGGGCTGGGTCAGCGAGCAGGACCCGTGCGGTATGGTaGAGAGAGACACACGCTGCGATTCTTTGTTACTGT +
Preference number: 6 (lower is better)
Translates to: RAGSASRTRAVW*RETHAAILCYC
Trigger: ACAGTAACAAAGAATCGCAGCGTGTGTCTCTCTTCACCATACCGCACGGGTCCTGCTCGCTGACCCAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS CCA 72 bp GATGTGGGGGAACGCCTCCTCCACGCTCTGCCACTGTaGCCCTTGCAGAGACTGAAAGATGTCTCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: DVGERLLHALPL*PLQRLKDVSSL
Trigger: CAGAGAAGAGACATCTTTCAGTCTCTGCAAGGGCCACAGTGGCAGAGCGTGGAGGAGGCGTTCCCCCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CCA 72 bp TTAGAAGGCATCTTCATCTCTTGCAGAAGAGACAGCTaGGCGGCCACGAGAACAGCGGGAACTTGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: LEGIFISCRRDS*AATRTAGTWPG
Trigger: GCCGGGCCAAGTTCCCGCTGTTCTCGTGGCCGCCCAGCTGTCTCTTCTGCAAGAGATGAAGATGCCTTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565628.1
CDS GCA 72 bp AACGCACCACGTCTGCCACAAAGCTGGTGCACTCACTaGAGACATCCTTCAGGACACAGCCGTGGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: NAPRLPQSWCTH*RHPSGHSRGSR
Trigger: TCTACTCCCACGGCTGTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGCAGACGTGGTGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CCA 72 bp GCTCAGCACACCTCCCGTGTCCTGGCCACTGATTCCTaGGGCCACCTTATGTTGAGTGTGTCCTGTTTTTGC +
Preference number: 6 (lower is better)
Translates to: AQHTSRVLATDS*GHLMLSVSCFC
Trigger: GCAAAAACAGGACACACTCAACATAAGGTGGCCCCAGGAATCAGTGGCCAGGACACGGGAGGTGTGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 90 bp CTGTCACTTGAAGTCAAGAGTCCTGGTGTTAGGGATGTAGAGGGATaGGGTCTGGCGACTGCGTCGTGGCGTAGTGTTGAGGACGTCCAC +
Preference number: 6 (lower is better)
Translates to: LSLEVKSPGVRDVEG*GLATASWRSVEDVH
Trigger: GTGGACGTCCTCAACACTACGCCACGACGCAGTCGCCAGACCCAATCCCTCTACATCCCTAACACCAGGACTCTTGACTTCAAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000393062.6
ENST00000562029.5
ENST00000569108.5
CDS TCA 72 bp AGGGGTGCAAGACTGAGCCAGGCTGGGCTTGATCTCTaGAAGGGAACTCACGACAGATCTGAGGGAAGGGTT +
Preference number: 6 (lower is better)
Translates to: RGARLSQAGLDL*KGTHDRSEGRV
Trigger: AACCCTTCCCTCAGATCTGTCGTGAGTTCCCTTTCAGAGATCAAGCCCAGCCTGGCTCAGTCTTGCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS GCA 72 bp GACCCTAACCCTCCCTGGCCTCAGCCTAAACAAGCCTaGGACCTTCTAAAACGCTGTCCATCAGCCATCTTG +
Preference number: 6 (lower is better)
Translates to: DPNPPWPQPKQA*DLLKRCPSAIL
Trigger: CAAGATGGCTGATGGACAGCGTTTTAGAAGGTCGCAGGCTTGTTTAGGCTGAGGCCAGGGAGGGTTAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 72 bp CGTGTCCTGGCCACTGATTCCTGGGGCCACCTTATGTaGAGTGTGTCCTGTTTTTGCTTCCCTGTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: RVLATDSWGHLM*SVSCFCFPVLG
Trigger: GCCAAGCACAGGGAAGCAAAAACAGGACACACTCAACATAAGGTGGCCCCAGGAATCAGTGGCCAGGACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 90 bp GCCACTGTGGCCCTTGCAGAGACTGAAAGATGTCTCTTCTCTGGATaGGCGCGGTTTTGGCAGCTGATACCCTCTGAGGACTCTCAAAGC +
Preference number: 6 (lower is better)
Translates to: ATVALAETERCLFSG*ARFWQLIPSEDSQS
Trigger: GCTTTGAGAGTCCTCAGAGGGTATCAGCTGCCAAAACCGCGCCAATCCAGAGAAGAGACATCTTTCAGTCTCTGCAAGGGCCACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS TCA 72 bp TTCTGTTGCCAGTTGCCTGATGGTGCCGTTTCCATCTaGACAATTCACCTCAGGTGCCACAGGTGTGACGCC +
Preference number: 6 (lower is better)
Translates to: FCCQLPDGAVSI*TIHLRCHRCDA
Trigger: GGCGTCACACCTGTGGCACCTGAGGTGAATTGTTCAGATGGAAACGGCACCATCAGGCAACTGGCAACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS TCA 72 bp GGCACCCAGGGCTTTAGGCTTCTGTTGCCAGTTGCCTaGTGGTGCCGTTTCCATCTGAACAATTCACCTCAG +
Preference number: 6 (lower is better)
Translates to: GTQGFRLLLPVA*WCRFHLNNSPQ
Trigger: CTGAGGTGAATTGTTCAGATGGAAACGGCACCATCAGGCAACTGGCAACAGAAGCCTAAAGCCCTGGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS TCA 72 bp GTGTCCTGGCCACTGATTCCTGGGGCCACCTTATGTTaGGTGTGTCCTGTTTTTGCTTCCCTGTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: VSWPLIPGATLC*VCPVFASLCLA
Trigger: TGCCAAGCACAGGGAAGCAAAAACAGGACACACTCAACATAAGGTGGCCCCAGGAATCAGTGGCCAGGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 72 bp GCCCTTGCAGAGACTGAAAGATGTCTCTTCTCTGGATaGGCGCGGTTTTGGCAGCTGATACCCTCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: ALAETERCLFSG*ARFWQLIPSED
Trigger: GTCCTCAGAGGGTATCAGCTGCCAAAACCGCGCCAATCCAGAGAAGAGACATCTTTCAGTCTCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CAA 90 bp CACACCTCCCGTGTCCTGGCCACTGATTCCTGGGGCCACCTTATGTaGAGTGTGTCCTGTTTTTGCTTCCCTGTGCTTGGCATAGAACTT +
Preference number: 6 (lower is better)
Translates to: HTSRVLATDSWGHLM*SVSCFCFPVLGIEL
Trigger: AAGTTCTATGCCAAGCACAGGGAAGCAAAAACAGGACACACTCAACATAAGGTGGCCCCAGGAATCAGTGGCCAGGACACGGGAGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS TCA 72 bp GATGTCTCTTCTCTGGATTGGCGCGGTTTTGGCAGCTaGTACCCTCTGAGGACTCTCAAAGCCCAGTGTGTA +
Preference number: 6 (lower is better)
Translates to: DVSSLDWRGFGS*YPLRTLKAQCV
Trigger: TACACACTGGGCTTTGAGAGTCCTCAGAGGGTATCAGCTGCCAAAACCGCGCCAATCCAGAGAAGAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS TCA 72 bp TCGGTCATCACTGCCAAGGCAGGTGGGCACCATCTATaGAGGTGCCACAGAGATGGAGTTGGACCATGTTTT +
Preference number: 6 (lower is better)
Translates to: SVITAKAGGHHL*RCHRDGVGPCF
Trigger: AAAACATGGTCCAACTCCATCTCTGTGGCACCTTCATAGATGGTGCCCACCTGCCTTGGCAGTGATGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CCA 72 bp ACTGAAAGATGTCTCTTCTCTGGATTGGCGCGGTTTTaGCAGCTGATACCCTCTGAGGACTCTCAAAGCCCA +
Preference number: 6 (lower is better)
Translates to: TERCLFSGLARF*QLIPSEDSQSP
Trigger: TGGGCTTTGAGAGTCCTCAGAGGGTATCAGCTGCCAAAACCGCGCCAATCCAGAGAAGAGACATCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378247.8
ENST00000562029.5
ENST00000565628.1
ENST00000569108.5
CDS CCA 72 bp GGCAGGTGGGCACCATCTATGAAGGTGCCACAGAGATaGAGTTGGACCATGTTTTCTGCTTTGGATTTGCAG +
Preference number: 6 (lower is better)
Translates to: GRWAPSMKVPQR*SWTMFSALDLQ
Trigger: CTGCAAATCCAAAGCAGAAAACATGGTCCAACTCCATCTCTGTGGCACCTTCATAGATGGTGCCCACCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 90 bp AAGGTGCCACAGAGATGGAGTTGGACCATGTTTTCTGCTTTGGATTaGCAGTGGGTTGTCCTGTCTAAAGCTGTGAACACACGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: KVPQRWSWTMFSALD*QWVVLSKAVNTRSW
Trigger: CCAGGAGCGTGTGTTCACAGCTTTAGACAGGACAACCCACTGCAAATCCAAAGCAGAAAACATGGTCCAACTCCATCTCTGTGGCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 90 bp TGGGCTTCCGAGCTGGCTAGTGGCACGACCATGGTTGCAGGTTCTTaGTTACTGTATTTAACGTATCTTTTTCCTCCGGCCATCTTCATG +
Preference number: 6 (lower is better)
Translates to: WASELASGTTMVAGS*LLYLTYLFPPAIFM
Trigger: CATGAAGATGGCCGGAGGAAAAAGATACGTTAAATACAGTAACAAAGAACCTGCAACCATGGTCGTGCCACTAGCCAGCTCGGAAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564878.5
CDS CAA 72 bp GTGCCACAGAGATGGAGTTGGACCATGTTTTCTGCTTaGGATTTGCAGTGGGTTGTCCTGTCTAAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: VPQRWSWTMFSA*DLQWVVLSKAV
Trigger: CACAGCTTTAGACAGGACAACCCACTGCAAATCCAAAGCAGAAAACATGGTCCAACTCCATCTCTGTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 72 bp GAGCTGGCTAGTGGCACGACCATGGTTGCAGGTTCTTaGTTACTGTATTTAACGTATCTTTTTCCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: ELASGTTMVAGS*LLYLTYLFPPA
Trigger: GGCCGGAGGAAAAAGATACGTTAAATACAGTAACAAAGAACCTGCAACCATGGTCGTGCCACTAGCCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564878.5
CDS CAA 90 bp TCTATGAAGGTGCCACAGAGATGGAGTTGGACCATGTTTTCTGCTTaGGATTTGCAGTGGGTTGTCCTGTCTAAAGCTGTGAACACACGC +
Preference number: 6 (lower is better)
Translates to: SMKVPQRWSWTMFSA*DLQWVVLSKAVNTR
Trigger: GCGTGTGTTCACAGCTTTAGACAGGACAACCCACTGCAAATCCAAAGCAGAAAACATGGTCCAACTCCATCTCTGTGGCACCTTCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 90 bp CAGGACCCGTGCGGTATGGTGAAGAGAGACACACGCTGCGATTCTTaGTTACTGTATTTAACGTATCTTTTTCCTCCGGCCATCTTCATG +
Preference number: 6 (lower is better)
Translates to: QDPCGMVKRDTRCDS*LLYLTYLFPPAIFM
Trigger: CATGAAGATGGCCGGAGGAAAAAGATACGTTAAATACAGTAACAAAGAATCGCAGCGTGTGTCTCTCTTCACCATACCGCACGGGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS CAA 72 bp CAGAGATGGAGTTGGACCATGTTTTCTGCTTTGGATTaGCAGTGGGTTGTCCTGTCTAAAGCTGTGAACACA +
Preference number: 6 (lower is better)
Translates to: QRWSWTMFSALD*QWVVLSKAVNT
Trigger: TGTGTTCACAGCTTTAGACAGGACAACCCACTGCAAATCCAAAGCAGAAAACATGGTCCAACTCCATCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562029.5
CDS CAA 72 bp GGCCATCTTCATGGTTTTCTCTCTGATTTCCACAGTTaGAATACACTGCATGTGTCAGGCAGGGGCTCATAT +
Preference number: 6 (lower is better)
Translates to: GHLHGFLSDFHS*NTLHVSGRGSY
Trigger: ATATGAGCCCCTGCCTGACACATGCAGTGTATTCAAACTGTGGAAATCAGAGAGAAAACCATGAAGATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564878.5
ENST00000565103.1
CDS CAA 72 bp TGCGGTATGGTGAAGAGAGACACACGCTGCGATTCTTaGTTACTGTATTTAACGTATCTTTTTCCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: CGMVKRDTRCDS*LLYLTYLFPPA
Trigger: GGCCGGAGGAAAAAGATACGTTAAATACAGTAACAAAGAATCGCAGCGTGTGTCTCTCTTCACCATACCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565103.1
CDS TCA 72 bp GCCATCTTCATGGTTTTCTCTCTGATTTCCACAGTTTaGATACACTGCATGTGTCAGGCAGGGGCTCATATT +
Preference number: 6 (lower is better)
Translates to: AIFMVFSLISTV*IHCMCQAGAHI
Trigger: AATATGAGCCCCTGCCTGACACATGCAGTGTATTCAAACTGTGGAAATCAGAGAGAAAACCATGAAGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564878.5
ENST00000565103.1
CDS TCA 72 bp CTTTCTTCTTCTTTTGGGAGTCCTATTACATGCATATaGTATCATTTGATATTTTCCCACAGTTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: LSSSFGSPITCI*YHLIFSHSSWM
Trigger: CATCCAAGAACTGTGGGAAAATATCAAATGATATCATATGCATGTAATAGGACTCCCAAAAGAAGAAGAAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564878.5
ENST00000565103.1