RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPIRE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134278

Ensembl transcript IDs: ENST00000309836.9, ENST00000409402.8, ENST00000410092.7, ENST00000440472.6, ENST00000449797.5, ENST00000453447.6, ENST00000462226.1, ENST00000464481.5, ENST00000487491.1, ENST00000497844.6, ENST00000592156.5

Found 625 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCTCAGATCT +
Preference number: 1 (lower is better)
Translates to: QKGEPARLSVLAHGR*LVAQKQLKGTRLRS
Trigger: AGATCTGAGCCTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
3UTR TCA 90 bp CTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCTCAGATCTCACTaGTCGTCCTCTCTGAAGGGCAGTACTCCGAGGGGCCTGGCGAGG +
Preference number: 1 (lower is better)
Translates to: LVAQKQLKGTRLRSH*SSSLKGSTPRGLAR
Trigger: CCTCGCCAGGCCCCTCGGAGTACTGCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCTCGTGCCTTTCAGCTGCTTTTGTGCTACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
3UTR TCA 90 bp AAGCCATGGAGAGGGAAGCACAGGTTTCCCAATAGTGTGACTTCATaGCGTATGGGACAAAAGGAACCGGTGCTCAGGCCTGGAGGGAGC +
Preference number: 1 (lower is better)
Translates to: KPWRGKHRFPNSVTS*RMGQKEPVLRPGGS
Trigger: GCTCCCTCCAGGCCTGAGCACCGGTTCCTTTTGTCCCATACGTCATGAAGTCACACTATTGGGAAACCTGTGCTTCCCTCTCCATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 90 bp TTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTaGACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACAC +
Preference number: 1 (lower is better)
Translates to: FQSGPFVGQHQTAPA*TDDFRNELLAVHTH
Trigger: GTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR TCA 90 bp GTGAGCACACCGGCCTCTTACAGAACTGACAGGTATAAGACCAAGTaGAGAAGGAAAACCTCCTGGTTCGGCAACAAAAGCAGAGCTTTC +
Preference number: 1 (lower is better)
Translates to: VSTPASYRTDRYKTK*RRKTSWFGNKSRAF
Trigger: GAAAGCTCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGGCCGGTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592156.5
3UTR TCA 90 bp AAATGCAGCCGCCATGCCTTTCATGAAACGGTGCTATCGTGGTGCTaGCTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATG +
Preference number: 1 (lower is better)
Translates to: KCSRHAFHETVLSWC*LQTCPMAFRKLLCM
Trigger: CATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACCACGATAGCACCGTTTCATGAAAGGCATGGCGGCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 90 bp TACTGTATTTTGATGTGGTATGAAATGCAGCCGCCATGCCTTTCATaGAACGGTGCTATCGTGGTGCTGACTACAGACATGTCCTATGGC +
Preference number: 1 (lower is better)
Translates to: YCILMWYEMQPPCLS*NGAIVVLTTDMSYG
Trigger: GCCATAGGACATGTCTGTAGTCAGCACCACGATAGCACCGTTTCATGAAAGGCATGGCGGCTGCATTTCATACCACATCAAAATACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 90 bp TGCCATGTGCCCTTTCTTACCCCACTTTCTGCAGATTGTTTCATATaGACGTACCCTCCACGTGACCTCTTTAATGCACTTGGCAAACTC +
Preference number: 1 (lower is better)
Translates to: CHVPFLTPLSADCFI*TYPPRDLFNALGKL
Trigger: GAGTTTGCCAAGTGCATTAAAGAGGTCACGTGGAGGGTACGTTCATATGAAACAATCTGCAGAAAGTGGGGTAAGAAAGGGCACATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CCA 90 bp CACACCTCCATGGTGCTCCAGTCCTCCATCAACTCTTTGGGAAACTaGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTGAGGAG +
Preference number: 1 (lower is better)
Translates to: HTSMVLQSSINSLGN*SSSSDLSIDLDFEE
Trigger: CTCCTCAAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGGACTGGAGCACCATGGAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR GCA 90 bp AAACTGAACAAGAAACCAGGACACGGAAGGAAGAACTGGAAGCTATaGCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCAC +
Preference number: 1 (lower is better)
Translates to: KLNKKPGHGRKNWKL*LKSDQAKDFKTKLH
Trigger: GTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTTCCAGTTCTTCCTTCCGTGTCCTGGTTTCTTGTTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR GCA 90 bp GAAGACTTTAATGGAAAACATTTAGTACCATCATGTCACCCTGAATaGCAGCAATACCTCGACTTTTACACACGCAGGAAGCCTAGTAAA +
Preference number: 1 (lower is better)
Translates to: EDFNGKHLVPSCHPE*QQYLDFYTRRKPSK
Trigger: TTTACTAGGCTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTACTAAATGTTTTCCATTAAAGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CCA 90 bp TTCATGAAACGGTGCTATCGTGGTGCTGACTACAGACATGTCCTATaGCTTTCAGGAAATTATTGTGCATGTGCATTAACAGATTTTCCA +
Preference number: 1 (lower is better)
Translates to: FMKRCYRGADYRHVL*LSGNYCACALTDFP
Trigger: TGGAAAATCTGTTAATGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACCACGATAGCACCGTTTCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CCA 90 bp ACCTGTCACGTTTCATCAATCGATACGAACACAGCATTCAGTCTGTaGAACAATGTGATGCGGCAAAAATCTGATCTAATGCAAATTCAA +
Preference number: 1 (lower is better)
Translates to: TCHVSSIDTNTAFSL*NNVMRQKSDLMQIQ
Trigger: TTGAATTTGCATTAGATCAGATTTTTGCCGCATCACATTGTTCCACAGACTGAATGCTGTGTTCGTATCGATTGATGAAACGTGACAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 90 bp AGAGGTGATCGTAATGCCCAAATCATCCAATACACTATCATAAAGTaGAGTGAAAGACATGTACTAGATGTTTGCTTTGTGAATGTGAAT +
Preference number: 1 (lower is better)
Translates to: RGDRNAQIIQYTIIK*SERHVLDVCFVNVN
Trigger: ATTCACATTCACAAAGCAAACATCTAGTACATGTCTTTCACTTCACTTTATGATAGTGTATTGGATGATTTGGGCATTACGATCACCTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTCTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAG +
Preference number: 2 (lower is better)
Translates to: NRALLLANTRLRRLELMILAHGR*LVAQKQ
Trigger: CTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAG...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
3UTR-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGATTTTGAGGAGAACCTaGCAATGCTCCGAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: CPRARTLTRSTKAAERHEILRRT*QCSEVA
Trigger: GGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAAAT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
3UTR-3UTR CCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTATCGGGCCCTTTTGTTaGCCAACACCAGACTGCGCC +
Preference number: 2 (lower is better)
Translates to: NRALLLANTRLRRLELMIIGPFC*PTPDCA
Trigger: GGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGAT...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR GCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTCACACACCTCCATGGTaGTCCAGTCCTCCATCAACT +
Preference number: 2 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFHTPPW*SSPPST
Trigger: AGTTGATGGAGGACTGGAGCACCATGGAGGTGTGTG...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTAGGAAGAGTGGAGTATaGTTTGGAGGGCAGCCGCAT +
Preference number: 2 (lower is better)
Translates to: NRALLLANTRLRRLELMIRKSGV*FGGQPH
Trigger: ATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCT...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTGCCGATGATGGGCAGTaGAGGGTTTTTCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFADDGQ*RVFLTS
Trigger: TGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGC...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR TCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTCAGACTGCGCCGGCTTaGACTGATGATTTCCGAAAT +
Preference number: 2 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFQTAPA*TDDFRN
Trigger: ATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTG...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCCCACACACACCTCCATaGTGCTCCAGTCCTCCATCA +
Preference number: 2 (lower is better)
Translates to: LANTRLRRLELMISEMNFPHTPP*CSSPPS
Trigger: TGATGGAGGACTGGAGCACCATGGAGGTGTGTGTGG...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR TCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGATGCGGCAAAAATCTaGTCTAATGCAAATTCAAGC +
Preference number: 2 (lower is better)
Translates to: CPRARTLTRSTKAAERHEDAAKI*SNANSS
Trigger: GCTTGAATTTGCATTAGATCAGATTTTTGCCGCATC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR GCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTCTACTTTCCCCTCTTTaGAGAGCAGAAGGTCCCAAT +
Preference number: 2 (lower is better)
Translates to: NRALLLANTRLRRLELMILLSPL*RAEGPN
Trigger: ATTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAG...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCAGGAAGAGTGGAGTATaGTTTGGAGGGCAGCCGCAT +
Preference number: 2 (lower is better)
Translates to: LANTRLRRLELMISEMNFRKSGV*FGGQPH
Trigger: ATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCT...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp AGAACCTGGCAATGCTCCGAAGTGGCCGATGATGGGCAGTGGAGGGTTTTTCTGAGAAGGAAAACCTCCTaGTTCGGCAACAAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: RTWQCSEVADDGQWRVFLRRKTS*FGNKSR
Trigger: TCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCT...CAGAAAAACCCTCCACTGCCCATCATCGGCCACTTCGGAGCATTGCCAGGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592156.5
3UTR-3UTR TCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATCTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHLAHGR*LVAQKQ
Trigger: CTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAG...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAACTGAACCAGGGCACTaGGACAACACGGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSTEPGH*DNTATQ
Trigger: CTGAGTGGCCGTGTTGTCCCAGTGCCCTGGTTCAGT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCATTTTGAGGAGAACCTaGCAATGCTCCGAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: LANTRLRRLELMISEMNFILRRT*QCSEVA
Trigger: GGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAAAT...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCGAGTGGAGTATGGTTTaGAGGGCAGCCGCATCTTTT +
Preference number: 2 (lower is better)
Translates to: LANTRLRRLELMISEMNFEWSMV*RAAASF
Trigger: AAAAGATGCGGCTGCCCTCCAAACCATACTCCACTC...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592156.5
3UTR-3UTR TCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGCAGACTGCGCCGGCTTaGACTGATGATTTCCGAAAT +
Preference number: 2 (lower is better)
Translates to: NTRLRRLELMISEMNFLQQTAPA*TDDFRN
Trigger: ATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTG...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR TCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGCTTTTTGCAACACTGTaGGCACACCGGCCTCTTACA +
Preference number: 2 (lower is better)
Translates to: NTRLRRLELMISEMNFLQLFATL*AHRPLT
Trigger: TGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAG...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592156.5
3UTR-3UTR GCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGCCTTTCATGAAACGGTaGTATCGTGGTGCTGACTAC +
Preference number: 2 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKPFMKR*YRGADY
Trigger: GTAGTCAGCACCACGATAGCACCGTTTCATGAAAGG...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTGCCGATGATGGGCAGTaGAGGGTTTTTCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: TDDFRNELLAVHTHLHGAADDGQ*RVFLTS
Trigger: TGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGC...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR CAA 90 bp ACTGGCTTCCAAAGCCACACACACACAAAAGTAAGTTTCAAACTGTaGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGT +
Preference number: 2 (lower is better)
Translates to: TGFQSHTHTKVSFKL*SSLSANEQLADLSR
Trigger: ACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTTGTGTGTGTGTGGCTTTGGAAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGGTCTGTGGAACAATGTaGTGCGGCAAAAATCTGATC +
Preference number: 2 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKVCGTM*CGKNLI
Trigger: GATCAGATTTTTGCCGCATCACATTGTTCCACAGAC...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGAGCCTTCCTTTGTCCTaGAACTCCCACACAACTTTA +
Preference number: 2 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKSLPLS*NSHTTL
Trigger: TAAAGTTGTGTGGGAGTTTCAGGACAAAGGAAGGCT...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGTATTTTGATGTGGTATaGAATGCAGCCGCCATGCCT +
Preference number: 2 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKYFDVV*NAAAMP
Trigger: AGGCATGGCGGCTGCATTTCATACCACATCAAAATA...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAGGTTTCCCAATAGTGTaGCTTCATGACGTATGGGAC +
Preference number: 2 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGGFPIV*LHDVWD
Trigger: GTCCCATACGTCATGAAGTCACACTATTGGGAAACC...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTCTGGAGTTCTTCATCTaGTTTGTCCATAGACTTAGA +
Preference number: 2 (lower is better)
Translates to: NRALLLANTRLRRLELMILEFFI*FVHRLR
Trigger: TCTAAGTCTATGGACAAATCAGATGAAGAACTCCAG...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR GCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTGCTCCAGCTCATTTCTaGAGCGTGGCCAACAGCTGC +
Preference number: 2 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIAPAHF*SVANSC
Trigger: GCAGCTGTTGGCCACGCTGCAGAAATGAGCTGGAGC...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAGTCTGTGGAACAATGTaGTGCGGCAAAAATCTGATC +
Preference number: 2 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGVCGTM*CGKNLI
Trigger: GATCAGATTTTTGCCGCATCACATTGTTCCACAGAC...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTAGTGGAGGGTTTTTCTaGCCTCATACTACTTTCCCC +
Preference number: 2 (lower is better)
Translates to: TDDFRNELLAVHTHLHGASGGFF*PHTTFP
Trigger: GGGGAAAGTAGTATGAGGTCAGAAAAACCCTCCACT...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR GCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAAGAACTGGAAGCTATaGCTAAAGTCAGACCAGGCT +
Preference number: 2 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGKNWKL*LKSDQA
Trigger: AGCCTGGTCTGACTTTAGGCATAGCTTCCAGTTCTT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAGTGCAAACGAGCAATTaGCGGACCTGTCACGTTTCA +
Preference number: 2 (lower is better)
Translates to: GADYRHVLWLSGNYCACAVQTSN*RTCHVS
Trigger: TGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCAC...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGACACGGAAGGAAGAACTaGAAGCTATGCCTAAAGTCA +
Preference number: 2 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGHGRKN*KLCLKS
Trigger: TGACTTTAGGCATAGCTTCCAGTTCTTCCTTCCGTG...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTAACTCTTTGGGAAACTaGAGTTCTTCATCTGATTTG +
Preference number: 2 (lower is better)
Translates to: NRALLLANTRLRRLELMINSLGN*SSSSDL
Trigger: CAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR TCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGAATAGTGTGACTTCATaGCGTATGGGACAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKNSVTS*RMGQKE
Trigger: TTCCTTTTGTCCCATACGTCATGAAGTCACACTATT...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CAA 90 bp CAGTCCTCCATCAACTCTTTGGGAAACTGGAGTTCTTCATCTGATTaGTCCATAGACTTAGATTTTGAGGAGAACCTGGCAATGCTCCGA +
Preference number: 2 (lower is better)
Translates to: QSSINSLGNWSSSSD*SIDLDFEENLAMLR
Trigger: TCGGAGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR TCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATAGTATAGCCCACGTATaGGCCAAACACACTGAGACA +
Preference number: 2 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHSIAHV*AKHTET
Trigger: TGTCTCAGTGTGTTTGGCTCATACGTGGGCTATACT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTCATAGACTTAGATTTTaGGGAGAACCTGGCAATGCT +
Preference number: 2 (lower is better)
Translates to: TDDFRNELLAVHTHLHGAHRLRF*GEPGNA
Trigger: AGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATG...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCAACTCTTTGGGAAACTaGAGTTCTTCATCTGATTTG +
Preference number: 2 (lower is better)
Translates to: LANTRLRRLELMISEMNFNSLGN*SSSSDL
Trigger: CAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTCCTCCATCAACTCTTTaGGAAACTGGAGTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: TDDFRNELLAVHTHLHGAPPSTL*ETGVLH
Trigger: ATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGG...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR CAA 90 bp AAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATaGGCGGACCTGTCACGTTTCATCAATCGATACGAACACAGCATT +
Preference number: 2 (lower is better)
Translates to: KVSFKLLSSLSANEQ*ADLSRFINRYEHSI
Trigger: AATGCTGTGTTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAATACGCTCAACGTCTTaGCAAACTTTTAGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSIRSTS*QTFSLP
Trigger: AGGAAGGCTAAAAGTTTGTCAAGACGTTGAGCGTAT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTGGTTTCCCAATAGTGTaGCTTCATGACGTATGGGAC +
Preference number: 2 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIGFPIV*LHDVWD
Trigger: GTCCCATACGTCATGAAGTCACACTATTGGGAAACC...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGCTAGGTACCAAATTGTaGCTTAATTTACTCAAGATG +
Preference number: 2 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKLGTKL*LNLLKM
Trigger: CATCTTGAGTAAATTAAGCCACAATTTGGTACCTAG...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAGGAACAGTAAAGAACTaGACTAAGGAAGTAGCTACT +
Preference number: 2 (lower is better)
Translates to: GADYRHVLWLSGNYCACAGTVKN*TKEVAT
Trigger: AGTAGCTACTTCCTTAGTTCAGTTCTTTACTGTTCC...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTTCAATAAGGGTTCTCTaGTGGCCCACTTTTACATGC +
Preference number: 2 (lower is better)
Translates to: CLGRVNSHCPLNECLSNISIRVL*WPTFTC
Trigger: GCATGTAAAAGTGGGCCACCAGAGAACCCTTATTGA...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR GCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGTGGCCCACTTTTACATaGAAATACAGACCAACTGTT +
Preference number: 2 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKWPTFT*KYRPTV
Trigger: AACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCA...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR TCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTGGAACAGTAAAGAACTaGACTAAGGAAGTAGCTACT +
Preference number: 2 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIGTVKN*TKEVAT
Trigger: AGTAGCTACTTCCTTAGTTCAGTTCTTTACTGTTCC...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR GCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGGACCAACTGTTAACATaGATTATTTTAGTCAACTGG +
Preference number: 2 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKDQLLT*IILVNW
Trigger: CCAGTTGACTAAAATAATGCATGTTAACAGTTGGTC...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTTACAGACATGTCCTATaGCTTTCAGGAAATTATTGT +
Preference number: 2 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIYRHVL*LSGNYC
Trigger: ACAATAATTTCCTGAAAGCCATAGGACATGTCTGTA...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 72 bp GAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAGCTGAAAGGCACGAGG +
Preference number: 3 (lower is better)
Translates to: EPARLSVLAHGR*LVAQKQLKGTR
Trigger: CCTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
3UTR TCA 72 bp AAGGCACGAGGCTCAGATCTCACTGATCGTCCTCTCTaGAGGGCAGTACTCCGAGGGGCCTGGCGAGGACAT +
Preference number: 3 (lower is better)
Translates to: KARGSDLTDRPL*RAVLRGAWRGH
Trigger: ATGTCCTCGCCAGGCCCCTCGGAGTACTGCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCTCGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
3UTR TCA 72 bp CAAAAGCAGCTGAAAGGCACGAGGCTCAGATCTCACTaGTCGTCCTCTCTGAAGGGCAGTACTCCGAGGGGC +
Preference number: 3 (lower is better)
Translates to: QKQLKGTRLRSH*SSSLKGSTPRG
Trigger: GCCCCTCGGAGTACTGCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCTCGTGCCTTTCAGCTGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
3UTR-3UTR CAA 90 bp CGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCTCAGATCTCATTCAATCGGGCCCTTTaGTTGGCCAACACCAGACTG +
Preference number: 3 (lower is better)
Translates to: RTLTRSTKAAERHEAQISFNRAL*LANTRL
Trigger: CAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAA...TGAGATCTGAGCCTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
3UTR-3UTR CAA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTTCCGAAATGAACTTCTaGCAGTCCACACACACCTCC +
Preference number: 3 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFSEMNF*QSTHTS
Trigger: GGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGA...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR TCA 72 bp AGAGGGAAGCACAGGTTTCCCAATAGTGTGACTTCATaGCGTATGGGACAAAAGGAACCGGTGCTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: RGKHRFPNSVTS*RMGQKEPVLRP
Trigger: AGGCCTGAGCACCGGTTCCTTTTGTCCCATACGTCATGAAGTCACACTATTGGGAAACCTGTGCTTCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 72 bp TTTGAGGAGAACCTGGCAATGCTCCGAAGTGGCCGATaGTGGGCAGTGGAGGGTTTTTCTGACCTCATACTA +
Preference number: 3 (lower is better)
Translates to: FEENLAMLRSGR*WAVEGFSDLIL
Trigger: TAGTATGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR TCA 72 bp GGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTaGACTGATGATTTCCGAAATGAACTTCTTGCAGTC +
Preference number: 3 (lower is better)
Translates to: GPFVGQHQTAPA*TDDFRNELLAV
Trigger: GACTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CAA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGTTCAATCGGGCCCTTTaGTTGGCCAACACCAGACTG +
Preference number: 3 (lower is better)
Translates to: NTRLRRLELMISEMNFLQFNRAL*LANTRL
Trigger: CAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAA...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR-3UTR CAA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTGGCAGCCGCATCTTTTaGCAACACTGTGAGCACACC +
Preference number: 3 (lower is better)
Translates to: TDDFRNELLAVHTHLHGAGSRIF*QHCEHT
Trigger: GGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCC...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592156.5
3UTR GCA 72 bp GATGAGAGCAGGGATGATGGTTCAGATACGCACACATaGTCTAAGACACATCAGACTCTAGCTGAGACCAGC +
Preference number: 3 (lower is better)
Translates to: DESRDDGSDTHT*SKTHQTLAETS
Trigger: GCTGGTCTCAGCTAGAGTCTGATGTGTCTTAGAGCATGTGTGCGTATCTGAACCATCATCCCTGCTCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 72 bp TTGATGTGGTATGAAATGCAGCCGCCATGCCTTTCATaGAACGGTGCTATCGTGGTGCTGACTACAGACATG +
Preference number: 3 (lower is better)
Translates to: LMWYEMQPPCLS*NGAIVVLTTDM
Trigger: CATGTCTGTAGTCAGCACCACGATAGCACCGTTTCATGAAAGGCATGGCGGCTGCATTTCATACCACATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 72 bp CCGGCCTCTTACAGAACTGACAGGTATAAGACCAAGTaGAGAAGGAAAACCTCCTGGTTCGGCAACAAAAGC +
Preference number: 3 (lower is better)
Translates to: PASYRTDRYKTK*RRKTSWFGNKS
Trigger: GCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592156.5
3UTR TCA 72 bp CGCCATGCCTTTCATGAAACGGTGCTATCGTGGTGCTaGCTACAGACATGTCCTATGGCTTTCAGGAAATTA +
Preference number: 3 (lower is better)
Translates to: RHAFHETVLSWC*LQTCPMAFRKL
Trigger: TAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACCACGATAGCACCGTTTCATGAAAGGCATGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CCA 72 bp TCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTaGCGGACCTGTCACGTTTCATCAATCGATACGAAC +
Preference number: 3 (lower is better)
Translates to: SNCCPLSVQTSN*RTCHVSSIDTN
Trigger: GTTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CAA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAACCTCTTTAATGCACTaGGCAAACTCCGTTAATGCT +
Preference number: 3 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGTSLMH*ANSVNA
Trigger: AGCATTAACGGAGTTTGCCAAGTGCATTAAAGAGGT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CAA 90 bp CAGTCCTCCATCAACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAACTACTTTCCCCTCTTaGCAGAGCAGAAGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: QSSINSLGNWSSSSDLSITTFPS*QSRRSQ
Trigger: TTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAGT...TATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
3UTR TCA 72 bp TACAGTATTTACAAGCATTCTTATACACTCCGACACTaGCAGGGAGTTAAGCCATGGAGAGGGAAGCACAGG +
Preference number: 3 (lower is better)
Translates to: YSIYKHSYTLRH*QGVKPWRGKHR
Trigger: CCTGTGCTTCCCTCTCCATGGCTTAACTCCCTGTCAGTGTCGGAGTGTATAAGAATGCTTGTAAATACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CCA 72 bp AAACTGAACAAGAAACCAGGACACGGAAGGAAGAACTaGAAGCTATGCCTAAAGTCAGACCAGGCTAAGGAT +
Preference number: 3 (lower is better)
Translates to: KLNKKPGHGRKN*KLCLKSDQAKD
Trigger: ATCCTTAGCCTGGTCTGACTTTAGGCATAGCTTCCAGTTCTTCCTTCCGTGTCCTGGTTTCTTGTTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 72 bp CCCTTTCTTACCCCACTTTCTGCAGATTGTTTCATATaGACGTACCCTCCACGTGACCTCTTTAATGCACTT +
Preference number: 3 (lower is better)
Translates to: PFLTPLSADCFI*TYPPRDLFNAL
Trigger: AAGTGCATTAAAGAGGTCACGTGGAGGGTACGTTCATATGAAACAATCTGCAGAAAGTGGGGTAAGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CCA 72 bp CGGTGCTATCGTGGTGCTGACTACAGACATGTCCTATaGCTTTCAGGAAATTATTGTGCATGTGCATTAACA +
Preference number: 3 (lower is better)
Translates to: RCYRGADYRHVL*LSGNYCACALT
Trigger: TGTTAATGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACCACGATAGCACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CAA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATAACACACTGAGACATTaGAGGCATACAATGCTACCC +
Preference number: 3 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHNTLRH*RHTMLP
Trigger: GGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 72 bp CTTAGTCAGGAGATTATTCGAGGAACAGTAAAGAACTaGACTAAGGAAGTAGCTACTGGCTTCCAAAGCCAC +
Preference number: 3 (lower is better)
Translates to: LSQEIIRGTVKN*TKEVATGFQSH
Trigger: GTGGCTTTGGAAGCCAGTAGCTACTTCCTTAGTTCAGTTCTTTACTGTTCCTCGAATAATCTCCTGACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR GCA 72 bp AATGGAAAACATTTAGTACCATCATGTCACCCTGAATaGCAGCAATACCTCGACTTTTACACACGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: NGKHLVPSCHPE*QQYLDFYTRRK
Trigger: CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTACTAAATGTTTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CAA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAACCCTAGGTACCAAATaGTGGCTTAATTTACTCAAG +
Preference number: 3 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSTLGTK*WLNLLK
Trigger: CTTGAGTAAATTAAGCCACAATTTGGTACCTAGGGT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR-3UTR CAA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTACCTCTTTAATGCACTaGGCAAACTCCGTTAATGCT +
Preference number: 3 (lower is better)
Translates to: CLGRVNSHCPLNECLSNITSLMH*ANSVNA
Trigger: AGCATTAACGGAGTTTGCCAAGTGCATTAAAGAGGT...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CCA 72 bp GTTTCATCAATCGATACGAACACAGCATTCAGTCTGTaGAACAATGTGATGCGGCAAAAATCTGATCTAATG +
Preference number: 3 (lower is better)
Translates to: VSSIDTNTAFSL*NNVMRQKSDLM
Trigger: CATTAGATCAGATTTTTGCCGCATCACATTGTTCCACAGACTGAATGCTGTGTTCGTATCGATTGATGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR TCA 72 bp TTTAGTATAGAAATGTTACTGTATTTTGATGTGGTATaGAATGCAGCCGCCATGCCTTTCATGAAACGGTGC +
Preference number: 3 (lower is better)
Translates to: FSIEMLLYFDVV*NAAAMPFMKRC
Trigger: GCACCGTTTCATGAAAGGCATGGCGGCTGCATTTCATACCACATCAAAATACAGTAACATTTCTATACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTGGCAGTCGCGCCGTGTaGCGGCGTCTCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTGSRAV*RRLLSS
Trigger: GGAGCTGAGGAGACGCCGGCACACGGCGCGACTGCC...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACTCCAGACGCGGATCTaGGCGGCCGAGCGCACACGG +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKALQTRI*AAERTR
Trigger: CCGTGTGCGCTCGGCCGCGCAGATCCGCGTCTGGAG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAACGGCGAGGACACGGCTaGAGTCCCGGTCAGACAGCC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKRRGHG*SPGQTA
Trigger: GGCTGTCTGACCGGGACTGCAGCCGTGTCCTCGCCG...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409402.8
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACACAATTTACCCGCAACTaGGGGCGGCTCTCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTQFTRN*GRLSRV
Trigger: GACGCGGGAGAGCCGCCCCCAGTTGCGGGTAAATTG...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCCCAGAGTTGGGGCTCTaGGGAGCTTCTTCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSPELGL*GASSAV
Trigger: CACAGCGGAAGAAGCTCCTCAGAGCCCCAACTCTGG...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCCTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSLAHGR*LVAQKQ
Trigger: CTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAG...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCAGAGAGCGGGAACTCTaGCTGGAAGGCGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSREREL*LEGGRN
Trigger: GTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCTCCAGACGCGGATCTaGGCGGCCGAGCGCACACGG +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHELQTRI*AAERTR
Trigger: CCGTGTGCGCTCGGCCGCGCAGATCCGCGTCTGGAG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAAGCGGGAACTCTGCCTaGAAGGCGGCAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKASGNSA*KAAGTA
Trigger: GGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAACTGATCGTCCTCTCTaGAGGGCAGTACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTTDRPL*RAVLRG
Trigger: CCCTCGGAGTACTGCCCTTCAGAGAGGACGATCAGT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTLAHGR*LVAQKQ
Trigger: CTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAG...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTACGCCTGCTCCTCGTTaGTGGGCTGGTTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTTPAPR*WAGCTA
Trigger: GGCTGTACAACCAGCCCATCAACGAGGAGCAGGCGT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACACGCTGTGCAGGCACCTaGTGTGAGGTACTTAACCCG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTRCAGT*CEVLNP
Trigger: CGGGTTAAGTACCTCACAGCAGGTGCCTGCACAGCG...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCAGGGAGACACGCTGCTaGTGCTGGTCGACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSRETRC*CWSTCA
Trigger: TGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTAGCGGGAACTCTGCCTaGAAGGCGGCAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAASGNSA*KAAGTA
Trigger: GGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGGCAATGCTCCGAAGTaGCCGATGATGGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTGNAPK*PMMGSG
Trigger: TCCACTGCCCATCATCGGCCACTTCGGAGCATTGCC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCCAGAGTTGGGGCTCTaGGGAGCTTCTTCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAPELGL*GASSAV
Trigger: CACAGCGGAAGAAGCTCCTCAGAGCCCCAACTCTGG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCTCCGAAGTGGCCGATaGTGGGCAGTGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTLRSGR*WAVEGF
Trigger: AAAACCCTCCACTGCCCATCATCGGCCACTTCGGAG...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAGGCTCAGATCTCACTaGTCGTCCTCTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTRLRSH*SSSLKG
Trigger: GCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGCTGTGCAGGCACCTaGTGTGAGGTACTTAACCCG +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTRCAGT*CEVLNP
Trigger: CGGGTTAAGTACCTCACAGCAGGTGCCTGCACAGCG...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTEGGRN*LTLVGV
Trigger: AACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSEGGRN*LTLVGV
Trigger: AACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTC...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAAGAGAGCGGGAACTCTaGCTGGAAGGCGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKREREL*LEGGRN
Trigger: GTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACATTCATGGAGGCTCCGTaGCCGTGGTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTFMEAP*PWWSWF
Trigger: AAACCAACTCCACCACGGCCACGGAGCCTCCATGAA...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCTTCATGGAGGCTCCGTaGCCGTGGTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSFMEAP*PWWSWF
Trigger: AAACCAACTCCACCACGGCCACGGAGCCTCCATGAA...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCATGGAATGTCGTCTCTaGGGTGGCTGCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSMECRL*GGCRLS
Trigger: AGAGAGACGGCAGCCACCCCAGAGACGACATTCCAT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACCAGAGTTGGGGCTCTaGGGAGCTTCTTCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEPELGL*GASSAV
Trigger: CACAGCGGAAGAAGCTCCTCAGAGCCCCAACTCTGG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCTCCGAAGTGGCCGATaGTGGGCAGTGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAALRSGR*WAVEGF
Trigger: AAAACCCTCCACTGCCCATCATCGGCCACTTCGGAG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTACTGATCGTCCTCTCTaGAGGGCAGTACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAATDRPL*RAVLRG
Trigger: CCCTCGGAGTACTGCCCTTCAGAGAGGACGATCAGT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAAGGCTCAGATCTCACTaGTCGTCCTCTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKARLRSH*SSSLKG
Trigger: GCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTAGGCTCAGATCTCACTaGTCGTCCTCTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTRLRSH*SSSLKG
Trigger: GCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAELAHGR*LVAQKQ
Trigger: CTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAACCGTGTTGGCCATGTaGTCGATAAGCTGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTTVLAM*SISCSR
Trigger: CCTAGAGCAGCTTATCGATCACATGGCCAACACGGT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAAAGAGGGAGACACGCTaGTGCTGCTGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAKRETR*CCWSTC
Trigger: ACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTAAGAGGGAGACACGCTaGTGCTGCTGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTKRETR*CCWSTC
Trigger: ACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGCAGCCGCATCTTTTTaGAACACTGTGAGCACACCG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTAAASF*NTVSTP
Trigger: CGGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR GCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAGGAGAACCTGGCAATaGTCCGAAGTGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTRRTWQ*SEVADD
Trigger: ATCATCGGCCACTTCGGAGCATTGCCAGGTTCTCCT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACACATAGCCCTCATCATTaGTACCGTCAGCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTHSPHH*YRQLPP
Trigger: CGGTGGAAGCTGACGGTAGCAATGATGAGGGCTATG...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCCATAGCCCTCATCATTaGTACCGTCAGCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSHSPHH*YRQLPP
Trigger: CGGTGGAAGCTGACGGTAGCAATGATGAGGGCTATG...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTCCCAGGCCTTCTTCTaGAGCCTCATAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTSQAFF*SLIALI
Trigger: GATGAGGGCTATGAGGCTGCAGAAGAAGGCCTGGGA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGCTCCGTGGCCGTGGTaGAGTTGGTTTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTAPWPW*SWFQFS
Trigger: AGAAAACTGAAACCAACTCCACCACGGCCACGGAGC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTACACGCTGCTGCTGCTaGTCGACTTGTGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTTRCCC*STCAAF
Trigger: AAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTGCCGTCTCTCTGGCTaGGGTGTTGATGATATGGGC +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTCRLSG*GVDDMG
Trigger: GCCCATATCATCAACACCCCAGCCAGAGAGACGGCA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGAGCGGGAACTCTGCCTaGAAGGCGGCAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHESGNSA*KAAGTA
Trigger: GGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCAGGAAGAGTGGAGTATaGTTTGGAGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSRKSGV*FGGQPH
Trigger: ATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGCCGATGATGGGCAGTaGAGGGTTTTTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTADDGQ*RVFLTS
Trigger: TGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCCACACACACCTCCATaGTGCTCCAGTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTPHTPP*CSSPPS
Trigger: TGATGGAGGACTGGAGCACCATGGAGGTGTGTGTGG...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAATCGGGCCCTTTTGTTaGCCAACACCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKIGPFC*PTPDCA
Trigger: GGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGAT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTATCGGGCCCTTTTGTTaGCCAACACCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAIGPFC*PTPDCA
Trigger: GGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGAT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTGTACTCCGAGGGGCCTaGCGAGGACATGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTVLRGA*RGHVER
Trigger: TCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTAC...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAACTGAACCAGGGCACTaGGACAACACGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKTEPGH*DNTATQ
Trigger: CTGAGTGGCCGTGTTGTCCCAGTGCCCTGGTTCAGT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACACTTTTTGCAACACTGTaGGCACACCGGCCTCTTACA +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTLFATL*AHRPLT
Trigger: TGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAG...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACTCCGAAGTGGCCGATaGTGGGCAGTGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAELRSGR*WAVEGF
Trigger: AAAACCCTCCACTGCCCATCATCGGCCACTTCGGAG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCCAGACTGCGCCGGCTTaGACTGATGATTTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSQTAPA*TDDFRN
Trigger: ATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTG...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAACTGATCGTCCTCTCTaGAGGGCAGTACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAETDRPL*RAVLRG
Trigger: CCCTCGGAGTACTGCCCTTCAGAGAGGACGATCAGT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTAGGCTCAGATCTCACTaGTCGTCCTCTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAARLRSH*SSSLKG
Trigger: GCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAACCGTGTTGGCCATGTaGTCGATAAGCTGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKATVLAM*SISCSR
Trigger: CCTAGAGCAGCTTATCGATCACATGGCCAACACGGT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTGGAAACTATGTAGCTaGCGTGAAGTGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTWKLCS*REVWRG
Trigger: CCCCCTCCACACTTCACGTCAGCTACATAGTTTCCA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACACTGTACCCAGAATCGTaGCCAGTCAGCGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTLYPES*PVSVFQ
Trigger: CTGAAAAACGCTGACTGGGCACGATTCTGGGTACAG...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACTGCTGGTCGACTTGTaGAGCGTTTCTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKALLVDL*SVSSSD
Trigger: GTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGGAGACACGCTGCTGCTaGTGGTCGACTTGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERETRCC*WSTCAA
Trigger: CGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTC...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAAAGAGGGAGACACGCTaGTGCTGCTGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKKRETR*CCWSTC
Trigger: ACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGAGAGAGCGGGAACTCTaGCTGGAAGGCGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEREREL*LEGGRN
Trigger: GTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACACACACCTCCATGGTaGTCCAGTCCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAHTPPW*SSPPST
Trigger: AGTTGATGGAGGACTGGAGCACCATGGAGGTGTGTG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGCTCCAGCTCATTTCTaGAGCGTGGCCAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEAPAHF*SVANSC
Trigger: GCAGCTGTTGGCCACGCTGCAGAAATGAGCTGGAGC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCCGTGGCCGTGGTaGAGTTGGTTTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAAPWPW*SWFQFS
Trigger: AGAAAACTGAAACCAACTCCACCACGGCCACGGAGC...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCAGTTCGGCCAGAGTTaGGGCTCTGAGGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAQFGQS*GSEELL
Trigger: AAGAAGCTCCTCAGAGCCCCAACTCTGGCCGAACTG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAACACGCTGCTGCTGCTaGTCGACTTGTGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKTRCCC*STCAAF
Trigger: AAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTGCCGATGATGGGCAGTaGAGGGTTTTTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTADDGQ*RVFLTS
Trigger: TGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGC...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCCACACACACCTCCATaGTGCTCCAGTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAPHTPP*CSSPPS
Trigger: TGATGGAGGACTGGAGCACCATGGAGGTGTGTGTGG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGTACTCCGAGGGGCCTaGCGAGGACATGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAVLRGA*RGHVER
Trigger: TCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTAC...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCGTGCAAACGAGCAATTaGCGGACCTGTCACGTTTCA +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSVQTSN*RTCHVS
Trigger: TGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCAC...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTCTAATCTCCTCTGGTaGTACAGGCCGCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTSNLLW*YRPQLS
Trigger: AGAAAGCTGCGGCCTGTATCACCAGAGGAGATTAGA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAGTGGAGGGTTTTTCTaGCCTCATACTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTSGGFF*PHTTFP
Trigger: GGGGAAAGTAGTATGAGGTCAGAAAAACCCTCCACT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCAGTGGAGGGTTTTTCTaGCCTCATACTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSSGGFF*PHTTFP
Trigger: GGGGAAAGTAGTATGAGGTCAGAAAAACCCTCCACT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGACTGATCGTCCTCTCTaGAGGGCAGTACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERTDRPL*RAVLRG
Trigger: CCCTCGGAGTACTGCCCTTCAGAGAGGACGATCAGT...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTACCGTGTTGGCCATGTaGTCGATAAGCTGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAATVLAM*SISCSR
Trigger: CCTAGAGCAGCTTATCGATCACATGGCCAACACGGT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAACCATCATGTCACCCTaGATGCCAGCAATACCTCGA +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKATIMSP*MPAIPR
Trigger: TCGAGGTATTGCTGGCATTCAGGGTGACATGATGGT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACTGTACCCAGAATCGTaGCCAGTCAGCGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKALYPES*PVSVFQ
Trigger: CTGAAAAACGCTGACTGGGCACGATTCTGGGTACAG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCTGCTGGTCGACTTGTaGAGCGTTTCTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAALLVDL*SVSSSD
Trigger: GTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGAGGGAGACACGCTGCTaGTGCTGGTCGACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHERETRC*CWSTCA
Trigger: TGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGTATTTTTCCAGCTCTaGCTTCACCAGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKVFFQL*LHQDLA
Trigger: CGCCAGGTCCTGGTGAAGGCAGAGCTGGAAAAATAC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGTATTTTTCCAGCTCTaGCTTCACCAGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAVFFQL*LHQDLA
Trigger: CGCCAGGTCCTGGTGAAGGCAGAGCTGGAAAAATAC...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAACACACACCTCCATGGTaGTCCAGTCCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKHTPPW*SSPPST
Trigger: AGTTGATGGAGGACTGGAGCACCATGGAGGTGTGTG...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGAGGCTCCGTGGCCGTaGTGGAGTTGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEEAPWP*WSWFQF
Trigger: AAACTGAAACCAACTCCACCACGGCCACGGAGCCTC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAATTCATGGAGGCTCCGTaGCCGTGGTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEFMEAP*PWWSWF
Trigger: AAACCAACTCCACCACGGCCACGGAGCCTCCATGAA...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAACACGCTGCTGCTGCTaGTCGACTTGTGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAETRCCC*STCAAF
Trigger: AAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCGGGGTGTTGATGATATaGGCAGGAATTTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSGVLMI*AGILEA
Trigger: AGCCTCCAAAATTCCTGCCCATATCATCAACACCCC...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAATGCCGTCTCTCTGGCTaGGGTGTTGATGATATGGGC +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAECRLSG*GVDDMG
Trigger: GCCCATATCATCAACACCCCAGCCAGAGAGACGGCA...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCGCGTTTCCTTTTCAATaGAATGTCGTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSAFPFQ*NVVSGV
Trigger: CACCCCAGAGACGACATTCCATTGAAAAGGAAACGC...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGCGTTTCCTTTTCAATaGAATGTCGTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTAFPFQ*NVVSGV
Trigger: CACCCCAGAGACGACATTCCATTGAAAAGGAAACGC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTAGCGAGGCATTCCACTaGGTAGCAGAATTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTSEAFH*VAEFLK
Trigger: CTTGAGGAATTCTGCTACCCAGTGGAATGCCTCGCT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCCGATGATGGGCAGTaGAGGGTTTTTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKADDGQ*RVFLTS
Trigger: TGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGGGCAATGCTCCGAAGTaGCCGATGATGGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERGNAPK*PMMGSG
Trigger: TCCACTGCCCATCATCGGCCACTTCGGAGCATTGCC...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAATTTTGAGGAGAACCTaGCAATGCTCCGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAILRRT*QCSEVA
Trigger: GGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAAAT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACCACACACACCTCCATaGTGCTCCAGTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEPHTPP*CSSPPS
Trigger: TGATGGAGGACTGGAGCACCATGGAGGTGTGTGTGG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGATCGGGCCCTTTTGTTaGCCAACACCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEIGPFC*PTPDCA
Trigger: GGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGAT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGATCGGGCCCTTTTGTTaGCCAACACCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERIGPFC*PTPDCA
Trigger: GGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGAT...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGACTGAACCAGGGCACTaGGACAACACGGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHETEPGH*DNTATQ
Trigger: CTGAGTGGCCGTGTTGTCCCAGTGCCCTGGTTCAGT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTMIWCI*FSREMS
Trigger: GCTCATCTCCCTACTGAATCAGATGCACCAAATCAT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTTCTAATCTCCTCTGGTaGTACAGGCCGCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAASNLLW*YRPQLS
Trigger: AGAAAGCTGCGGCCTGTATCACCAGAGGAGATTAGA...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCTTTTTGCAACACTGTaGGCACACCGGCCTCTTACA +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAALFATL*AHRPLT
Trigger: TGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR TCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGATTCAGTAGGGAGATaGGCAGCACACAACTTCATG +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKADSVGR*AAHNFM
Trigger: CATGAAGTTGTGTGCTGCTCATCTCCCTACTGAATC...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCCGCCATGCCTTTCATaGAACGGTGCTATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERPPCLS*NGAIVV
Trigger: CACCACGATAGCACCGTTTCATGAAAGGCATGGCGG...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCCAGTGCACGACATACTaGCTGATAATGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSQCTTY*LIMIWC
Trigger: GCACCAAATCATTATCAGGCAGTATGTCGTGCACTG...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGAGCTCCATTGTTTCTaGAAACAGTGCACGACATAC +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTELHCF*KQCTTY
Trigger: GTATGTCGTGCACTGTTTGCAGAAACAATGGAGCTC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGGCAAAGGGTTGTACTaGCGCTCTTGGACCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKGKGLY*RSWTFL
Trigger: TAAGAAGGTCCAAGAGCGGCAGTACAACCCTTTGCC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACTGCTGGTCGACTTGTaGAGCGTTTCTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAELLVDL*SVSSSD
Trigger: GTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEEGGRN*LTLVGV
Trigger: AACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAACCTGGCAATGCTCCGAAGTGGCCGATGATGGGCAGTGGAGGGTTTTTCTGAGAGAGCGGGAACTCTaGCTGGAAGGCGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RTWQCSEVADDGQWRVFLREREL*LEGGRN
Trigger: GTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCT...CAGAAAAACCCTCCACTGCCCATCATCGGCCACTTCGGAGCATTGCCAGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGTATTTTTCCAGCTCTaGCTTCACCAGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEVFFQL*LHQDLA
Trigger: CGCCAGGTCCTGGTGAAGGCAGAGCTGGAAAAATAC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCTACTTTCCCCTCTTTaGAGAGCAGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTLLSPL*RAEGPN
Trigger: ATTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAG...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGAGAACCTGGCAATaGTCCGAAGTGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAERRTWQ*SEVADD
Trigger: ATCATCGGCCACTTCGGAGCATTGCCAGGTTCTCCT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTCCCAGGCCTTCTTCTaGAGCCTCATAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERSQAFF*SLIALI
Trigger: GATGAGGGCTATGAGGCTGCAGAAGAAGGCCTGGGA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGTTGTCCTCTCTCAGTaGAAACGAGCAATTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKVVLSQ*KRAIGG
Trigger: TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAAC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGCGTGGCCAACAGCTaGCACTGTACACTGTCACAA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAESVANS*HCTLSQ
Trigger: TTGTGACAGTGTACAGTGGCAGCTGTTGGCCACGCT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGAGGCTCCGTGGCCGTaGTGGAGTTGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEEAPWP*WSWFQF
Trigger: AAACTGAAACCAACTCCACCACGGCCACGGAGCCTC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTCTAATATTCTTTCATaGAGGCTCCGTGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTSNILS*RLRGRG
Trigger: ACCACGGCCACGGAGCCTCCATGAAAGAATATTAGA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCAGTTCGGCCAGAGTTaGGGCTCTGAGGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEQFGQS*GSEELL
Trigger: AAGAAGCTCCTCAGAGCCCCAACTCTGGCCGAACTG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTGCCGTCTCTCTGGCTaGGGTGTTGATGATATGGGC +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERCRLSG*GVDDMG
Trigger: GCCCATATCATCAACACCCCAGCCAGAGAGACGGCA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGATGGAATGTCGTCTCTaGGGTGGCTGCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEMECRL*GGCRLS
Trigger: AGAGAGACGGCAGCCACCCCAGAGACGACATTCCAT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAAGCGGGAACTCTGCCTaGAAGGCGGCAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTSGNSA*KAAGTA
Trigger: GGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCT...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAAGCGAGGCATTCCACTaGGTAGCAGAATTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKSEAFH*VAEFLK
Trigger: CTTGAGGAATTCTGCTACCCAGTGGAATGCCTCGCT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGCCTTCACCAGGACCTaGCGAATATGCATCACTTCT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAAFTRT*RICITS
Trigger: AGAAGTGATGCATATTCGCCAGGTCCTGGTGAAGGC...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCAGAAGGAAAACCTCCTaGTTCGGCAACAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSRRKTS*FGNKSR
Trigger: TCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGAAGAGTGGAGTATaGTTTGGAGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAERKSGV*FGGQPH
Trigger: ATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAATTTTGAGGAGAACCTaGCAATGCTCCGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKILRRT*QCSEVA
Trigger: GGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAAAT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCCACACACACCTCCATaGTGCTCCAGTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEPHTPP*CSSPPS
Trigger: TGATGGAGGACTGGAGCACCATGGAGGTGTGTGTGG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGTGCAAACGAGCAATTaGCGGACCTGTCACGTTTCA +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKVQTSN*RTCHVS
Trigger: TGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCAC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAATCTAATCTCCTCTGGTaGTACAGGCCGCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAESNLLW*YRPQLS
Trigger: AGAAAGCTGCGGCCTGTATCACCAGAGGAGATTAGA...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTCCAGAGTTGGGGCTCTaGGGAGCTTCTTCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: NRALLLANTRLRRLELMIPELGL*GASSAV
Trigger: CACAGCGGAAGAAGCTCCTCAGAGCCCCAACTCTGG...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGATTCAGTAGGGAGATaGGCAGCACACAACTTCATG +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKDSVGR*AAHNFM
Trigger: CATGAAGTTGTGTGCTGCTCATCTCCCTACTGAATC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGTGCTATCGTGGTGCTaGCTACAGACATGTCCTATG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEVLSWC*LQTCPM
Trigger: CATAGGACATGTCTGTAGTCAGCACCACGATAGCAC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAACCATCATGTCACCCTaGATGCCAGCAATACCTCGA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAETIMSP*MPAIPR
Trigger: TCGAGGTATTGCTGGCATTCAGGGTGACATGATGGT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACAGTGCACGACATACTaGCTGATAATGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAQCTTY*LIMIWC
Trigger: GCACCAAATCATTATCAGGCAGTATGTCGTGCACTG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCTGTTTCTGCAAACAGTaGACGACATACTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSCFCKQ*TTYCLI
Trigger: TATCAGGCAGTATGTCGTGCACTGTTTGCAGAAACA...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGAGCTCCATTGTTTCTaGAAACAGTGCACGACATAC +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAELHCF*KQCTTY
Trigger: GTATGTCGTGCACTGTTTGCAGAAACAATGGAGCTC...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACTGTACCCAGAATCGTaGCCAGTCAGCGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAELYPES*PVSVFQ
Trigger: CTGAAAAACGCTGACTGGGCACGATTCTGGGTACAG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTGAGACACGCTGCTGCTaGTGGTCGACTTGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFETRCC*WSTCAA
Trigger: CGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTC...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTAGGACCTGGCGAATATaGATCACTTCTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTRTWRI*ITSSTV
Trigger: TACTGTGGAAGAAGTGATGCATATTCGCCAGGTCCT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCAGCCGCATCTTTTTaGAACACTGTGAGCACACCG +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEAAASF*NTVSTP
Trigger: CGGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR GCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCTACTTTCCCCTCTTTaGAGAGCAGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAALLSPL*RAEGPN
Trigger: ATTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGAGGAGAACCTGGCAATaGTCCGAAGTGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERRRTWQ*SEVADD
Trigger: ATCATCGGCCACTTCGGAGCATTGCCAGGTTCTCCT...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACACACCTCCATGGTaGTCCAGTCCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERHTPPW*SSPPST
Trigger: AGTTGATGGAGGACTGGAGCACCATGGAGGTGTGTG...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCCTTTCATGAAACGGTaGTATCGTGGTGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAPFMKR*YRGADY
Trigger: GTAGTCAGCACCACGATAGCACCGTTTCATGAAAGG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGGCTCCGTGGCCGTGGTaGAGTTGGTTTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERAPWPW*SWFQFS
Trigger: AGAAAACTGAAACCAACTCCACCACGGCCACGGAGC...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCTCCGTGGCCGTGGTaGAGTTGGTTTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEAPWPW*SWFQFS
Trigger: AGAAAACTGAAACCAACTCCACCACGGCCACGGAGC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTTCTAATATTCTTTCATaGAGGCTCCGTGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAASNILS*RLRGRG
Trigger: ACCACGGCCACGGAGCCTCCATGAAAGAATATTAGA...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGGGGTGTTGATGATATaGGCAGGAATTTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAGVLMI*AGILEA
Trigger: AGCCTCCAAAATTCCTGCCCATATCATCAACACCCC...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCGTTTCCTTTTCAATaGAATGTCGTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKAFPFQ*NVVSGV
Trigger: CACCCCAGAGACGACATTCCATTGAAAAGGAAACGC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGAGTGGAGTATGGTTTaGAGGGCAGCCGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEEWSMV*RAAASF
Trigger: AAAAGATGCGGCTGCCCTCCAAACCATACTCCACTC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAACCTGGCAATGCTCCGAAGTGGCCGATGATGGGCAGTGGAGGGTTTTTCTGGGCAATGCTCCGAAGTaGCCGATGATGGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RTWQCSEVADDGQWRVFLGNAPK*PMMGSG
Trigger: TCCACTGCCCATCATCGGCCACTTCGGAGCATTGCC...CAGAAAAACCCTCCACTGCCCATCATCGGCCACTTCGGAGCATTGCCAGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTCAATAAGGGTTCTCTaGTGGCCCACTTTTACATGC +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTSIRVL*WPTFTC
Trigger: GCATGTAAAAGTGGGCCACCAGAGAACCCTTATTGA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGATTCAGTAGGGAGATaGGCAGCACACAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEDSVGR*AAHNSV
Trigger: AACAGAGTTGTGTGCTGCTCATCTCCCTACTGAATC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309836.9
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKMIWCI*FSREMS
Trigger: GCTCATCTCCCTACTGAATCAGATGCACCAAATCAT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACATAGACTTAGATTTTaGGGAGAACCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAHRLRF*GEPGNA
Trigger: AGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCAGACTGCGCCGGCTTaGACTGATGATTTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERQTAPA*TDDFRN
Trigger: ATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTG...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGTCTGTGGAACAATGTaGTGCGGCAAAAATCTGATC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKVCGTM*CGKNLI
Trigger: GATCAGATTTTTGCCGCATCACATTGTTCCACAGAC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTATACGCTCAACGTCTTaGCAAACTTTTAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTIRSTS*QTFSLP
Trigger: AGGAAGGCTAAAAGTTTGTCAAGACGTTGAGCGTAT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAATATTTTGATGTGGTATaGAATGCAGCCGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKYFDVV*NAAAMP
Trigger: AGGCATGGCGGCTGCATTTCATACCACATCAAAATA...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGCAGATTGTTTCATATaGACGTACCCTCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEADCFI*TYPPRD
Trigger: GTCACGTGGAGGGTACGTTCATATGAAACAATCTGC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCAGTGCACGACATACTaGCTGATAATGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAQCTTY*LIMIWC
Trigger: GCACCAAATCATTATCAGGCAGTATGTCGTGCACTG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCATGTTTCTGCAAACAGTaGACGACATACTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKACFCKQ*TTYCLI
Trigger: TATCAGGCAGTATGTCGTGCACTGTTTGCAGAAACA...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTGTTTCTGCAAACAGTaGACGACATACTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTCFCKQ*TTYCLI
Trigger: TATCAGGCAGTATGTCGTGCACTGTTTGCAGAAACA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGAGCTCCATTGTTTCTaGAAACAGTGCACGACATAC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKELHCF*KQCTTY
Trigger: GTATGTCGTGCACTGTTTGCAGAAACAATGGAGCTC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCTGTACCCAGAATCGTaGCCAGTCAGCGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERLYPES*PVSVFQ
Trigger: CTGAAAAACGCTGACTGGGCACGATTCTGGGTACAG...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGGGCAAAGGGTTGTACTaGCGCTCTTGGACCTTCTTA +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERGKGLY*RSWTFL
Trigger: TAAGAAGGTCCAAGAGCGGCAGTACAACCCTTTGCC...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCGCAAGGTGTATCTTTTaGAGCGAATGTCATCCATTA +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSARCIF*SECHPL
Trigger: TAATGGATGACATTCGCTGCAAAAGATACACCTTGC...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAAGGACCTGGCGAATATaGATCACTTCTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKRTWRI*ITSSTV
Trigger: TACTGTGGAAGAAGTGATGCATATTCGCCAGGTCCT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAGGCAGTCGCGCCGTGTaGCGGCGTCTCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACAGSRAV*RRLLSS
Trigger: GGAGCTGAGGAGACGCCGGCACACGGCGCGACTGCC...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp CGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCTCAGATCTCAGAGGCTCCGTGGCCGTaGTGGAGTTGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RTLTRSTKAAERHEAQISEAPWP*WSWFQF
Trigger: AAACTGAAACCAACTCCACCACGGCCACGGAGCCTC...TGAGATCTGAGCCTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CCA 90 bp AGAACCTGGCAATGCTCCGAAGTGGCCGATGATGGGCAGTGGAGGGTTTTTCTGTTCATGGAGGCTCCGTaGCCGTGGTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RTWQCSEVADDGQWRVFLFMEAP*PWWSWF
Trigger: AAACCAACTCCACCACGGCCACGGAGCCTCCATGAA...CAGAAAAACCCTCCACTGCCCATCATCGGCCACTTCGGAGCATTGCCAGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTTATGGGCAGGAATTTTaGAGGCTTCTTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAYGQEF*RLLPCG
Trigger: TCCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATA...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAATATGGGCAGGAATTTTaGAGGCTTCTTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKYGQEF*RLLPCG
Trigger: TCCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATA...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGCGTTTCCTTTTCAATaGAATGTCGTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEAFPFQ*NVVSGV
Trigger: CACCCCAGAGACGACATTCCATTGAAAAGGAAACGC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCCTTCACCAGGACCTaGCGAATATGCATCACTTCT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEAFTRT*RICITS
Trigger: AGAAGTGATGCATATTCGCCAGGTCCTGGTGAAGGC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTAGAAGGAAAACCTCCTaGTTCGGCAACAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAARRKTS*FGNKSR
Trigger: TCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGAGTGGAGTATGGTTTaGAGGGCAGCCGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEEWSMV*RAAASF
Trigger: AAAAGATGCGGCTGCCCTCCAAACCATACTCCACTC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACCTCCATCAACTCTTTaGGAAACTGGAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAPPSTL*ETGVLH
Trigger: ATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGAGTGGAGTATGGTTTaGAGGGCAGCCGCATCTATT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEEWSMV*RAAASI
Trigger: AATAGATGCGGCTGCCCTCCAAACCATACTCCACTC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEMIWCI*FSREMS
Trigger: GCTCATCTCCCTACTGAATCAGATGCACCAAATCAT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCATCCATTCACCATAGATaGCTCCACAAGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKASIHHR*LHKILC
Trigger: ACAAAGAATCTTGTGGAGTCATCTATGGTGAATGGA...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGAGTGGAGGGTTTTTCTaGCCTCATACTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERSGGFF*PHTTFP
Trigger: GGGGAAAGTAGTATGAGGTCAGAAAAACCCTCCACT...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTAGGCTCAGATCTCACTaGTCGTCCTCTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFRLRSH*SSSLKG
Trigger: GCCCTTCAGAGAGGACGATCAGTGAGATCTGAGCCT...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR TCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGCTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKLAHGR*LVAQKQ
Trigger: CTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAG...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGATTCAGTAGGGAGATaGGCAGCACACAACTTCATG +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEDSVGR*AAHNFM
Trigger: CATGAAGTTGTGTGCTGCTCATCTCCCTACTGAATC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGGATTCAGTAGGGAGATaGGCAGCACACAACTTCATG +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERDSVGR*AAHNFM
Trigger: CATGAAGTTGTGTGCTGCTCATCTCCCTACTGAATC...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACACTTTGTGAATGTGAATaGAAGTCTTATTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTLCECE*KSYFGG
Trigger: ACCCCCAAAATAAGACTTTCATTCACATTCACAAAG...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGGTTTCCCAATAGTGTaGCTTCATGACGTATGGGAC +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEGFPIV*LHDVWD
Trigger: GTCCCATACGTCATGAAGTCACACTATTGGGAAACC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCAAGGTGTATCTTTTaGAGCGAATGTCATCCATTA +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAARCIF*SECHPL
Trigger: TAATGGATGACATTCGCTGCAAAAGATACACCTTGC...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFEGGRN*LTLVGV
Trigger: AACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTC...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGACCTGGCGAATATaGATCACTTCTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAERTWRI*ITSSTV
Trigger: TACTGTGGAAGAAGTGATGCATATTCGCCAGGTCCT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCTACTTTCCCCTCTTTaGAGAGCAGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHELLSPL*RAEGPN
Trigger: ATTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTTGGTCAGAAATGTATaGAGCTCCATTGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TTERRASPAQCPRARTLTLVRNV*SSIVSA
Trigger: TGCAGAAACAATGGAGCTCCATACATTTCTGACCAA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAATTGTACTGCCGCTCTTaGACCTTCTTAAGTTTTACC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKLYCRS*TFLSFT
Trigger: GGTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAA...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTTTGTACTGCCGCTCTTaGACCTTCTTAAGTTTTACC +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAALYCRS*TFLSFT
Trigger: GGTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAA...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACATTGGTTTCAGTTTTCTaGCTGAGACTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTLVSVF*LRLDLK
Trigger: CTTTAAATCCAGTCTCAGCCAGAAAACTGAAACCAA...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAGAGGCTCCGTGGCCGTaGTGGAGTTGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTEAPWP*WSWFQF
Trigger: AAACTGAAACCAACTCCACCACGGCCACGGAGCCTC...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACATTCATGGAGGCTCCGTaGCCGTGGTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTFMEAP*PWWSWF
Trigger: AAACCAACTCCACCACGGCCACGGAGCCTCCATGAA...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTCTAATATTCTTTCATaGAGGCTCCGTGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERSNILS*RLRGRG
Trigger: ACCACGGCCACGGAGCCTCCATGAAAGAATATTAGA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TTCCTTTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACAGTTCGGCCAGAGTTaGGGCTCTGAGGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FLFNRALLLANTRLRRLEQFGQS*GSEELL
Trigger: AAGAAGCTCCTCAGAGCCCCAACTCTGGCCGAACTG...TTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAATATGGGCAGGAATTTTaGAGGCTTCTTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEYGQEF*RLLPCG
Trigger: TCCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATA...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGGGGTGTTGATGATATaGGCAGGAATTTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEGVLMI*AGILEA
Trigger: AGCCTCCAAAATTCCTGCCCATATCATCAACACCCC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGGGGGTGTTGATGATATaGGCAGGAATTTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERGVLMI*AGILEA
Trigger: AGCCTCCAAAATTCCTGCCCATATCATCAACACCCC...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCTCAGATCTCAAGGAAGAGTGGAGTATaGTTTGGAGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: RTLTRSTKAAERHEAQISRKSGV*FGGQPH
Trigger: ATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCT...TGAGATCTGAGCCTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCCTCCATCAACTCTTTaGGAAACTGGAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAPPSTL*ETGVLH
Trigger: ATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAACCTCCATCAACTCTTTaGGAAACTGGAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKPPSTL*ETGVLH
Trigger: ATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGG...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAGTACTCCGAGGGGCCTaGCGAGGACATGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTVLRGA*RGHVER
Trigger: TCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTAC...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERMIWCI*FSREMS
Trigger: GCTCATCTCCCTACTGAATCAGATGCACCAAATCAT...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAATCCATTCACCATAGATaGCTCCACAAGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKSIHHR*LHKILC
Trigger: ACAAAGAATCTTGTGGAGTCATCTATGGTGAATGGA...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACATAGACTTAGATTTTaGGGAGAACCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEHRLRF*GEPGNA
Trigger: AGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGATGCGGCAAAAATCTaGTCTAATGCAAATTCAAGC +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKDAAKI*SNANSS
Trigger: GCTTGAATTTGCATTAGATCAGATTTTTGCCGCATC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGGAACAGTAAAGAACTaGACTAAGGAAGTAGCTACT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKGTVKN*TKEVAT
Trigger: AGTAGCTACTTCCTTAGTTCAGTTCTTTACTGTTCC...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTATTCAAGATAGAGAATaGAGACCTGTCATCCACTCA +
Preference number: 4 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAIQDRE*RPVIHS
Trigger: TGAGTGGATGACAGGTCTTCATTCTCTATCTTGAAT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCATTTGTGTTTCCTATATaGCACCTAATATCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAFVFPI*HLISSP
Trigger: AGGACTGGATATTAGGTGTCATATAGGAAACACAAA...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCAGTGCACGACATACTaGCTGATAATGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEQCTTY*LIMIWC
Trigger: GCACCAAATCATTATCAGGCAGTATGTCGTGCACTG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAATGTTTCTGCAAACAGTaGACGACATACTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAECFCKQ*TTYCLI
Trigger: TATCAGGCAGTATGTCGTGCACTGTTTGCAGAAACA...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp CTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGCGCTGTGCAGGCACCTaGTGTGAGGTACTTAACCCG +
Preference number: 4 (lower is better)
Translates to: LLLANTRLRRLELMISEMRCAGT*CEVLNP
Trigger: CGGGTTAAGTACCTCACAGCAGGTGCCTGCACAGCG...CATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAAGAGACACGCTGCTGCTaGTGGTCGACTTGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYEETRCC*WSTCAA
Trigger: CGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTC...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGAGGGAGACACGCTGCTaGTGCTGGTCGACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKRETRC*CWSTCA
Trigger: TGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCT...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGAGAGCGGGAACTCTaGCTGGAAGGCGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGREREL*LEGGRN
Trigger: GTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTAGGAGAACCTGGCAATaGTCCGAAGTGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFRRTWQ*SEVADD
Trigger: ATCATCGGCCACTTCGGAGCATTGCCAGGTTCTCCT...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGTCATGTCACCCTGAATaGCAGCAATACCTCGACTTT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHESCHPE*QQYLDF
Trigger: AAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGA...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCATTGGTTTCAGTTTTCTaGCTGAGACTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKALVSVF*LRLDLK
Trigger: CTTTAAATCCAGTCTCAGCCAGAAAACTGAAACCAA...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTAGCGGGAACTCTGCCTaGAAGGCGGCAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: TDDFRNELLAVHTHLHGASGNSA*KAAGTA
Trigger: GGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCT...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CCA 90 bp CGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCTCAGATCTCAGCCTTCACCAGGACCTaGCGAATATGCATCACTTCT +
Preference number: 4 (lower is better)
Translates to: RTLTRSTKAAERHEAQISAFTRT*RICITS
Trigger: AGAAGTGATGCATATTCGCCAGGTCCTGGTGAAGGC...TGAGATCTGAGCCTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CCA 90 bp TTCCTTTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAAAGGAAGAGTGGAGTATaGTTTGGAGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: FLFNRALLLANTRLRRLERKSGV*FGGQPH
Trigger: ATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCT...TTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGGGCAATGCTCCGAAGTaGCCGATGATGGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKGNAPK*PMMGSG
Trigger: TCCACTGCCCATCATCGGCCACTTCGGAGCATTGCC...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCCTAGGTACCAAATTGTaGCTTAATTTACTCAAGATG +
Preference number: 4 (lower is better)
Translates to: ERRASPAQCPRARTLTRSLGTKL*LNLLKM
Trigger: CATCTTGAGTAAATTAAGCCACAATTTGGTACCTAG...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACATACAGACATGTCCTATaGCTTTCAGGAAATTATTGT +
Preference number: 4 (lower is better)
Translates to: RRASPAQCPRARTLTRSTYRHVL*LSGNYC
Trigger: ACAATAATTTCCTGAAAGCCATAGGACATGTCTGTA...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCATAGACTTAGATTTTaGGGAGAACCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERHRLRF*GEPGNA
Trigger: AGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATG...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCATAGACTTAGATTTTaGGGAGAACCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEHRLRF*GEPGNA
Trigger: AGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCAGCACACAACTTCATaGCATCTCTATATGACCGAA +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEQHTTS*HLYMTE
Trigger: TTCGGTCATATAGAGATGTCATGAAGTTGTGTGCTG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAATTCAAGATAGAGAATaGAGACCTGTCATCCACTCA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEIQDRE*RPVIHS
Trigger: TGAGTGGATGACAGGTCTTCATTCTCTATCTTGAAT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAATTTGTGTTTCCTATATaGCACCTAATATCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKFVFPI*HLISSP
Trigger: AGGACTGGATATTAGGTGTCATATAGGAAACACAAA...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTGTTTCTGCAAACAGTaGACGACATACTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERCFCKQ*TTYCLI
Trigger: TATCAGGCAGTATGTCGTGCACTGTTTGCAGAAACA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACACTGTACCCAGAATCGTaGCCAGTCAGCGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTLYPES*PVSVFQ
Trigger: CTGAAAAACGCTGACTGGGCACGATTCTGGGTACAG...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAGGCAAAGGGTTGTACTaGCGCTCTTGGACCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTGKGLY*RSWTFL
Trigger: TAAGAAGGTCCAAGAGCGGCAGTACAACCCTTTGCC...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTGGCAAAGGGTTGTACTaGCGCTCTTGGACCTTCTTA +
Preference number: 4 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFGKGLY*RSWTFL
Trigger: TAAGAAGGTCCAAGAGCGGCAGTACAACCCTTTGCC...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAGCAAGGTGTATCTTTTaGAGCGAATGTCATCCATTA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEARCIF*SECHPL
Trigger: TAATGGATGACATTCGCTGCAAAAGATACACCTTGC...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp CTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAAGAGGGAGACACGCTaGTGCTGCTGGTCGACTTGT +
Preference number: 4 (lower is better)
Translates to: LLLANTRLRRLELMISEMKRETR*CCWSTC
Trigger: ACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTT...CATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTT +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKEGGRN*LTLVGV
Trigger: AACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTC...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGACCAACTGTTAACATaGATTATTTTAGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: ASPAQCPRARTLTRSTKADQLLT*IILVNW
Trigger: CCAGTTGACTAAAATAATGCATGTTAACAGTTGGTC...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAATTGGTCAGAAATGTATaGAGCTCCATTGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAELVRNV*SSIVSA
Trigger: TGCAGAAACAATGGAGCTCCATACATTTCTGACCAA...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGTTGTACTGCCGCTCTTaGACCTTCTTAAGTTTTACC +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHELYCRS*TFLSFT
Trigger: GGTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAA...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGCAGTTCGGCCAGAGTTaGGGCTCTGAGGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKQFGQS*GSEELL
Trigger: AAGAAGCTCCTCAGAGCCCCAACTCTGGCCGAACTG...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTCAATCGGGCCCTTTTTGCCGTCTCTCTGGCTaGGGTGTTGATGATATGGGC +
Preference number: 4 (lower is better)
Translates to: AWRGHVERLRFPFQSGPFCRLSG*GVDDMG
Trigger: GCCCATATCATCAACACCCCAGCCAGAGAGACGGCA...AAAAGGGCCCGATTGAAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAGCCTTCACCAGGACCTaGCGAATATGCATCACTTCT +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTAFTRT*RICITS
Trigger: AGAAGTGATGCATATTCGCCAGGTCCTGGTGAAGGC...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAAACTCTTTGGGAAACTaGAGTTCTTCATCTGATTTG +
Preference number: 4 (lower is better)
Translates to: RASPAQCPRARTLTRSTKNSLGN*SSSSDL
Trigger: CAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGCCTCCATCAACTCTTTaGGAAACTGGAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEPPSTL*ETGVLH
Trigger: ATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGG...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCACAATTTACCCGCAACTaGGGGCGGCTCTCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACAQFTRN*GRLSRV
Trigger: GACGCGGGAGAGCCGCCCCCAGTTGCGGGTAAATTG...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGTCCATTCACCATAGATaGCTCCACAAGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHESIHHR*LHKILC
Trigger: ACAAAGAATCTTGTGGAGTCATCTATGGTGAATGGA...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp TTCCTTTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAAAGTGGAGGGTTTTTCTaGCCTCATACTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FLFNRALLLANTRLRRLESGGFF*PHTTFP
Trigger: GGGGAAAGTAGTATGAGGTCAGAAAAACCCTCCACT...TTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTAGTGGAGGGTTTTTCTaGCCTCATACTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: NRALLLANTRLRRLELMISGGFF*PHTTFP
Trigger: GGGGAAAGTAGTATGAGGTCAGAAAAACCCTCCACT...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTCTCCGAAGTGGCCGATaGTGGGCAGTGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TDDFRNELLAVHTHLHGALRSGR*WAVEGF
Trigger: AAAACCCTCCACTGCCCATCATCGGCCACTTCGGAG...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCTGGAGTTCTTCATCTaGTTTGTCCATAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERLEFFI*FVHRLR
Trigger: TCTAAGTCTATGGACAAATCAGATGAAGAACTCCAG...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR TCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAACATCAGACTCTAGCTaGGACCAGCCAGACATTTCT +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTTSDSS*DQPDIS
Trigger: AGAAATGTCTGGCTGGTCTCAGCTAGAGTCTGATGT...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGATTCCCACTGTCCACTaGATGAATGCCTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEIPTVH*MNAFQI
Trigger: TATTTGAAAGGCATTCATTCAGTGGACAGTGGGAAT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGCAAGGTGTATCTTTTaGAGCGAATGTCATCCATTA +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHEARCIF*SECHPL
Trigger: TAATGGATGACATTCGCTGCAAAAGATACACCTTGC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR GCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAGAGACACGCTGCTGCTaGTGGTCGACTTGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACAETRCC*WSTCAA
Trigger: CGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTC...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGAGGAGAACCTGGCAATaGTCCGAAGTGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKRRTWQ*SEVADD
Trigger: ATCATCGGCCACTTCGGAGCATTGCCAGGTTCTCCT...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGCACACACCTCCATGGTaGTCCAGTCCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKHTPPW*SSPPST
Trigger: AGTTGATGGAGGACTGGAGCACCATGGAGGTGTGTG...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAATCCCAGGCCTTCTTCTaGAGCCTCATAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYESQAFF*SLIALI
Trigger: GATGAGGGCTATGAGGCTGCAGAAGAAGGCCTGGGA...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACACCTTTCATGAAACGGTaGTATCGTGGTGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTPFMKR*YRGADY
Trigger: GTAGTCAGCACCACGATAGCACCGTTTCATGAAAGG...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGTTGGTCAGAAATGTATaGAGCTCCATTGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CPRARTLTRSTKAAERHELVRNV*SSIVSA
Trigger: TGCAGAAACAATGGAGCTCCATACATTTCTGACCAA...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGACAGTTCGGCCAGAGTTaGGGCTCTGAGGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGQFGQS*GSEELL
Trigger: AAGAAGCTCCTCAGAGCCCCAACTCTGGCCGAACTG...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAACTCTTTGGGAAACTaGAGTTCTTCATCTGATTTG +
Preference number: 4 (lower is better)
Translates to: PAQCPRARTLTRSTKAAENSLGN*SSSSDL
Trigger: CAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CCA 90 bp GCACACCGGCCTCTTACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAAATCGGGCCCTTTTGTTaGCCAACACCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: AHRPLTELTGIRPSEEGKIGPFC*PTPDCA
Trigger: GGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGAT...TTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGGCCGGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGGTACTCCGAGGGGCCTaGCGAGGACATGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: NTRLRRLELMISEMNFLQVLRGA*RGHVER
Trigger: TCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTAC...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAATCCTCGTTGATGGGCTaGTTGTACAGCCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYESSLMG*LYSRRI
Trigger: GATCCTGCGGCTGTACAACCAGCCCATCAACGAGGA...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGATCCTCGTTGATGGGCTaGTTGTACAGCCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGSSLMG*LYSRRI
Trigger: GATCCTGCGGCTGTACAACCAGCCCATCAACGAGGA...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTCTAATCTCCTCTGGTaGTACAGGCCGCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LANTRLRRLELMISEMNFSNLLW*YRPQLS
Trigger: AGAAAGCTGCGGCCTGTATCACCAGAGGAGATTAGA...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGACCGTGTTGGCCATGTaGTCGATAAGCTGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: NTRLRRLELMISEMNFLQTVLAM*SISCSR
Trigger: CCTAGAGCAGCTTATCGATCACATGGCCAACACGGT...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR TCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAAGCCTTCCTTTGTCCTaGAACTCCCACACAACTTTA +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTSLPLS*NSHTTL
Trigger: TAAAGTTGTGTGGGAGTTTCAGGACAAAGGAAGGCT...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCTACCGGAGCAGTTTTaGGGTATTACTGTTAATTTA +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERLPEQF*GITVNL
Trigger: TAAATTAACAGTAATACCTCAAAACTGCTCCGGTAG...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTTCCCAAAGATTCAATaGCAGTTAATAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AQCPRARTLTRSTKAAERFPKIQ*QLIVAF
Trigger: GAAAGCCACTATTAACTGTCATTGAATCTTTGGGAA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp TTCCTTTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAAGAGCTCCATTGTTTCTaGAAACAGTGCACGACATAC +
Preference number: 4 (lower is better)
Translates to: FLFNRALLLANTRLRRLEELHCF*KQCTTY
Trigger: GTATGTCGTGCACTGTTTGCAGAAACAATGGAGCTC...TTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCACGCTGTGCAGGCACCTaGTGTGAGGTACTTAACCCG +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACARCAGT*CEVLNP
Trigger: CGGGTTAAGTACCTCACAGCAGGTGCCTGCACAGCG...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGACTGCTGGTCGACTTGTaGAGCGTTTCTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGLLVDL*SVSSSD
Trigger: GTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAG...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAACACACACCTCCATGGTaGTCCAGTCCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYEHTPPW*SSPPST
Trigger: AGTTGATGGAGGACTGGAGCACCATGGAGGTGTGTG...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGACATAGCCCTCATCATTaGTACCGTCAGCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGHSPHH*YRQLPP
Trigger: CGGTGGAAGCTGACGGTAGCAATGATGAGGGCTATG...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAAAGAACTGGAAGCTATaGCTAAAGTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTKNWKL*LKSDQA
Trigger: AGCCTGGTCTGACTTTAGGCATAGCTTCCAGTTCTT...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCATCTTTTTGCAACACTGTGAGCACACCGGCCTCTTACAGAACTGACAGGTATGCTCCGTGGCCGTGGTaGAGTTGGTTTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ASFCNTVSTPASYRTDRYAPWPW*SWFQFS
Trigger: AGAAAACTGAAACCAACTCCACCACGGCCACGGAGC...ATACCTGTCAGTTCTGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTTTCATGGAGGCTCCGTaGCCGTGGTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TDDFRNELLAVHTHLHGAFMEAP*PWWSWF
Trigger: AAACCAACTCCACCACGGCCACGGAGCCTCCATGAA...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCGCCTTCACCAGGACCTaGCGAATATGCATCACTTCT +
Preference number: 4 (lower is better)
Translates to: LANTRLRRLELMISEMNFAFTRT*RICITS
Trigger: AGAAGTGATGCATATTCGCCAGGTCCTGGTGAAGGC...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAACTTTTTGCAACACTGTaGGCACACCGGCCTCTTACA +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYELFATL*AHRPLT
Trigger: TGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAG...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGACTCCGAAGTGGCCGATaGTGGGCAGTGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGLRSGR*WAVEGF
Trigger: AAAACCCTCCACTGCCCATCATCGGCCACTTCGGAG...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AGAACCTGGCAATGCTCCGAAGTGGCCGATGATGGGCAGTGGAGGGTTTTTCTGCTGGAGTTCTTCATCTaGTTTGTCCATAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: RTWQCSEVADDGQWRVFLLEFFI*FVHRLR
Trigger: TCTAAGTCTATGGACAAATCAGATGAAGAACTCCAG...CAGAAAAACCCTCCACTGCCCATCATCGGCCACTTCGGAGCATTGCCAGGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGACAGACTGCGCCGGCTTaGACTGATGATTTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGQTAPA*TDDFRN
Trigger: ATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTG...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GCATCTTTTTGCAACACTGTGAGCACACCGGCCTCTTACAGAACTGACAGGTATCAGACTGCGCCGGCTTaGACTGATGATTTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: ASFCNTVSTPASYRTDRYQTAPA*TDDFRN
Trigger: ATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTG...ATACCTGTCAGTTCTGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR TCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTACGCCTGCTCCTCGTTaGTGGGCTGGTTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNITPAPR*WAGCTA
Trigger: GGCTGTACAACCAGCCCATCAACGAGGAGCAGGCGT...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTCAGCACACAACTTCATaGCATCTCTATATGACCGAA +
Preference number: 4 (lower is better)
Translates to: NRALLLANTRLRRLELMIQHTTS*HLYMTE
Trigger: TTCGGTCATATAGAGATGTCATGAAGTTGTGTGCTG...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR TCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGAGTATAGCCCACGTATaGGCCAAACACACTGAGACA +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKSIAHV*AKHTET
Trigger: TGTCTCAGTGTGTTTGGCTCATACGTGGGCTATACT...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAAGTGCTATCGTGGTGCTaGCTACAGACATGTCCTATG +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYEVLSWC*LQTCPM
Trigger: CATAGGACATGTCTGTAGTCAGCACCACGATAGCAC...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGCGCTGTGCAGGCACCTaGTGTGAGGTACTTAACCCG +
Preference number: 4 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKRCAGT*CEVLNP
Trigger: CGGGTTAAGTACCTCACAGCAGGTGCCTGCACAGCG...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTCTGCTGGTCGACTTGTaGAGCGTTTCTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TDDFRNELLAVHTHLHGALLVDL*SVSSSD
Trigger: GTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAG...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATAGGGAGACACGCTGCTaGTGCTGGTCGACTTGTGCA +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHRETRC*CWSTCA
Trigger: TGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp ACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAACCTCCTGGTTCGGCAGTATTTTTCCAGCTCTaGCTTCACCAGGACCTGGCG +
Preference number: 4 (lower is better)
Translates to: TELTGIRPSEEGKPPGSAVFFQL*LHQDLA
Trigger: CGCCAGGTCCTGGTGAAGGCAGAGCTGGAAAAATAC...TGCCGAACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR GCA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCCTACTTTCCCCTCTTTaGAGAGCAGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LANTRLRRLELMISEMNFLLSPL*RAEGPN
Trigger: ATTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAG...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR GCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATGCTCCAGCTCATTTCTaGAGCGTGGCCAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHAPAHF*SVANSC
Trigger: GCAGCTGTTGGCCACGCTGCAGAAATGAGCTGGAGC...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGTCTAATATTCTTTCATaGAGGCTCCGTGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKSNILS*RLRGRG
Trigger: ACCACGGCCACGGAGCCTCCATGAAAGAATATTAGA...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGCGAGGCATTCCACTaGGTAGCAGAATTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGSEAFH*VAEFLK
Trigger: CTTGAGGAATTCTGCTACCCAGTGGAATGCCTCGCT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAAAGCGAGGCATTCCACTaGGTAGCAGAATTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYESEAFH*VAEFLK
Trigger: CTTGAGGAATTCTGCTACCCAGTGGAATGCCTCGCT...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAATTTTGAGGAGAACCTaGCAATGCTCCGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGILRRT*QCSEVA
Trigger: GGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAAAT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGATTTTGAGGAGAACCTaGCAATGCTCCGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: NTRLRRLELMISEMNFLQILRRT*QCSEVA
Trigger: GGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAAAT...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGGAAAACCTCCTGGTTCGGCAACAAAAGCAGAGCTTTCCTTTTCCACACACACCTCCATaGTGCTCCAGTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: QVKKENLLVRQQKQSFPFPHTPP*CSSPPS
Trigger: TGATGGAGGACTGGAGCACCATGGAGGTGTGTGTGG...AAAAGGAAAGCTCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCTTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGATCGGGCCCTTTTGTTaGCCAACACCAGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKIGPFC*PTPDCA
Trigger: GGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGAT...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CAA 72 bp GGTCCCAATGAAAAGATAGGAAGAGTGGAGTATGGTTaGGAGGGCAGCCGCATCTTTTTGCAACACTGTGAG +
Preference number: 4 (lower is better)
Translates to: GPNEKIGRVEYG*EGSRIFLQHCE
Trigger: CTCACAGTGTTGCAAAAAGATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCTATCTTTTCATTGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR TCA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCATTCACCATAGATaGCTCCACAAGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NRALLLANTRLRRLELMISIHHR*LHKILC
Trigger: ACAAAGAATCTTGTGGAGTCATCTATGGTGAATGGA...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR TCA 90 bp GCACACCGGCCTCTTACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAACTTTTTGCAACACTGTaGGCACACCGGCCTCTTACA +
Preference number: 4 (lower is better)
Translates to: AHRPLTELTGIRPSEEGKLFATL*AHRPLT
Trigger: TGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAG...TTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGGCCGGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR TCA 90 bp TTCCTTTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGGAGTTCTTCATCTaGTTTGTCCATAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: FLFNRALLLANTRLRRLELEFFI*FVHRLR
Trigger: TCTAAGTCTATGGACAAATCAGATGAAGAACTCCAG...TTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACATGTTTCCATACATTGTaGATATCCCAATTTACCCGC +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTCFHTL*ISQFTR
Trigger: GCGGGTAAATTGGGATATTCACAATGTATGGAAACA...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGACCGCCATGCCTTTCATaGAACGGTGCTATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGPPCLS*NGAIVV
Trigger: CACCACGATAGCACCGTTTCATGAAAGGCATGGCGG...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCATGGAAACTATGTAGCTaGCGTGAAGTGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSWKLCS*REVWRG
Trigger: CCCCCTCCACACTTCACGTCAGCTACATAGTTTCCA...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAACATCAGACTCTAGCTaGGACCAGCCAGACATTTCT +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGTSDSS*DQPDIS
Trigger: AGAAATGTCTGGCTGGTCTCAGCTAGAGTCTGATGT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TTCCTTTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAAGCAAGGTGTATCTTTTaGAGCGAATGTCATCCATTA +
Preference number: 4 (lower is better)
Translates to: FLFNRALLLANTRLRRLEARCIF*SECHPL
Trigger: TAATGGATGACATTCGCTGCAAAAGATACACCTTGC...TTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAGCAGCCGCATCTTTTTaGAACACTGTGAGCACACCG +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACAAAASF*NTVSTP
Trigger: CGGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGC...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CCTCTTACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAACCTCCTGGTGCAGCCGCATCTTTTTaGAACACTGTGAGCACACCG +
Preference number: 4 (lower is better)
Translates to: PLTELTGIRPSEEGKPPGAAASF*NTVSTP
Trigger: CGGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGC...ACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR GCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGACTACTTTCCCCTCTTTaGAGAGCAGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGLLSPL*RAEGPN
Trigger: ATTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAG...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAACTACTTTCCCCTCTTTaGAGAGCAGAAGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYELLSPL*RAEGPN
Trigger: ATTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAG...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CCTCTTACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAACCTCCTGGTAGGAGAACCTGGCAATaGTCCGAAGTGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: PLTELTGIRPSEEGKPPGRRTWQ*SEVADD
Trigger: ATCATCGGCCACTTCGGAGCATTGCCAGGTTCTCCT...ACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR GCA 90 bp CCTCTTACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAACCTCCTGGTCACACACCTCCATGGTaGTCCAGTCCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: PLTELTGIRPSEEGKPPGHTPPW*SSPPST
Trigger: AGTTGATGGAGGACTGGAGCACCATGGAGGTGTGTG...ACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR GCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAAGCGTGGCCAACAGCTaGCACTGTACACTGTCACAA +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSSVANS*HCTLSQ
Trigger: TTGTGACAGTGTACAGTGGCAGCTGTTGGCCACGCT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGTGCCGTCTCTCTGGCTaGGGTGTTGATGATATGGGC +
Preference number: 4 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKCRLSG*GVDDMG
Trigger: GCCCATATCATCAACACCCCAGCCAGAGAGACGGCA...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATATGGAATGTCGTCTCTaGGGTGGCTGCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHMECRL*GGCRLS
Trigger: AGAGAGACGGCAGCCACCCCAGAGACGACATTCCAT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTGAGTGGAGTATGGTTTaGAGGGCAGCCGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: TDDFRNELLAVHTHLHGAEWSMV*RAAASF
Trigger: AAAAGATGCGGCTGCCCTCCAAACCATACTCCACTC...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAAGGAAGAGTGGAGTATaGTTTGGAGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSRKSGV*FGGQPH
Trigger: ATGCGGCTGCCCTCCAAACCATACTCCACTCTTCCT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp ACAGGTATAAGACCAAGTGAAGAAGGAAAACCTCCTGGTTCGGCAACAAAAGCAGCCGATGATGGGCAGTaGAGGGTTTTTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: TGIRPSEEGKPPGSATKAADDGQ*RVFLTS
Trigger: TGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGC...TGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATGTACTCCGAGGGGCCTaGCGAGGACATGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHVLRGA*RGHVER
Trigger: TCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTAC...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCACCAGAGTTGGGGCTCTaGGGAGCTTCTTCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKAPELGL*GASSAV
Trigger: CACAGCGGAAGAAGCTCCTCAGAGCCCCAACTCTGG...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCACTCGCGCACGGACGCTaGCTCGTAGCACAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKALAHGR*LVAQKQ
Trigger: CTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAG...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACACTACCGGAGCAGTTTTaGGGTATTACTGTTAATTTA +
Preference number: 4 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTLPEQF*GITVNL
Trigger: TAAATTAACAGTAATACCTCAAAACTGCTCCGGTAG...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCATATACACTCCGACACTaGCAGGGAGTTAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACAYTLRH*QGVKPW
Trigger: CCATGGCTTAACTCCCTGTCAGTGTCGGAGTGTATA...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GCAGTACTCCGAGGGGCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTTGTTTCCATACATTGTaGATATCCCAATTTACCCTC +
Preference number: 4 (lower is better)
Translates to: AVLRGAWRGHVERLRFPFCFHTL*ISQFTL
Trigger: GAGGGTAAATTGGGATATTCACAATGTATGGAAACA...AAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGCAGTGCACGACATACTaGCTGATAATGATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: NTRLRRLELMISEMNFLQQCTTY*LIMIWC
Trigger: GCACCAAATCATTATCAGGCAGTATGTCGTGCACTG...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR GCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGTCAGATACGCACACATaGTCTAAGACACATCAGACT +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKSDTHT*SKTHQT
Trigger: AGTCTGATGTGTCTTAGAGCATGTGTGCGTATCTGA...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGGCTCCGTGGCCGTGGTaGAGTTGGTTTCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKAPWPW*SWFQFS
Trigger: AGAAAACTGAAACCAACTCCACCACGGCCACGGAGC...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGAGCCGATGATGGGCAGTaGAGGGTTTTTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGADDGQ*RVFLTS
Trigger: TGAGGTCAGAAAAACCCTCCACTGCCCATCATCGGC...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTCAATCGGGCCCTTTTCCTCCATCAACTCTTTaGGAAACTGGAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AWRGHVERLRFPFQSGPFPPSTL*ETGVLH
Trigger: ATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGG...AAAAGGGCCCGATTGAAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAACAGCATTCAGTCTGTaGAACAATGTGATGCGGCAA +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGTAFSL*NNVMRQ
Trigger: TTGCCGCATCACATTGTTCCACAGACTGAATGCTGT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGCTTTTTGCAACACTGTaGGCACACCGGCCTCTTACA +
Preference number: 4 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKLFATL*AHRPLT
Trigger: TGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAG...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGCATAGACTTAGATTTTaGGGAGAACCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: NTRLRRLELMISEMNFLQHRLRF*GEPGNA
Trigger: AGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATG...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR TCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGGATGCGGCAAAAATCTaGTCTAATGCAAATTCAAGC +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKDAAKI*SNANSS
Trigger: GCTTGAATTTGCATTAGATCAGATTTTTGCCGCATC...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAAATACGCTCAACGTCTTaGCAAACTTTTAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYEIRSTS*QTFSLP
Trigger: AGGAAGGCTAAAAGTTTGTCAAGACGTTGAGCGTAT...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAAGTATAGCCCACGTATaGGCCAAACACACTGAGACA +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACASIAHV*AKHTET
Trigger: TGTCTCAGTGTGTTTGGCTCATACGTGGGCTATACT...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAGGTTTCCCAATAGTGTaGCTTCATGACGTATGGGAC +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACAGFPIV*LHDVWD
Trigger: GTCCCATACGTCATGAAGTCACACTATTGGGAAACC...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTCATAGCCCTCATCATTaGTACCGTCAGCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIHSPHH*YRQLPP
Trigger: CGGTGGAAGCTGACGGTAGCAATGATGAGGGCTATG...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGATTTAACTGTGCCATGTaGCCTTTCTTACCCCACTTT +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGFNCAM*PFLPHF
Trigger: AAAGTGGGGTAAGAAAGGGCACATGGCACAGTTAAA...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGATCAGATACGCACACATaGTCTAAGACACATCAGACT +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGSDTHT*SKTHQT
Trigger: AGTCTGATGTGTCTTAGAGCATGTGTGCGTATCTGA...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGTTGGTCAGAAATGTATaGAGCTCCATTGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKLVRNV*SSIVSA
Trigger: TGCAGAAACAATGGAGCTCCATACATTTCTGACCAA...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTAGAAGGAAAACCTCCTaGTTCGGCAACAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TDDFRNELLAVHTHLHGARRKTS*FGNKSR
Trigger: TCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCT...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATGAGTGGAGTATGGTTTaGAGGGCAGCCGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHEWSMV*RAAASF
Trigger: AAAAGATGCGGCTGCCCTCCAAACCATACTCCACTC...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATCAGGGAGTTAAGCCATaGAGAGGGAAGCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHQGVKP*RGKHRF
Trigger: AAACCTGTGCTTCCCTCTCCATGGCTTAACTCCCTG...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp CAGTCCTCCATCAACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAAGCGAGGCATTCCACTaGGTAGCAGAATTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: QSSINSLGNWSSSSDLSISEAFH*VAEFLL
Trigger: TAGGAGGAATTCTGCTACCCAGTGGAATGCCTCGCT...TATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592156.5
3UTR CAA 72 bp TTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATaGGCGGACCTGTCACGTTTCATCAATCGATACGAA +
Preference number: 4 (lower is better)
Translates to: FKLLSSLSANEQ*ADLSRFINRYE
Trigger: TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATAGTGGAGGGTTTTTCTaGCCTCATACTACTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHSGGFF*PHTTFP
Trigger: GGGGAAAGTAGTATGAGGTCAGAAAAACCCTCCACT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAGTCTGTGGAACAATGTaGTGCGGCAAAAATCTGATC +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSVCGTM*CGKNLI
Trigger: GATCAGATTTTTGCCGCATCACATTGTTCCACAGAC...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAGGAACAGTAAAGAACTaGACTAAGGAAGTAGCTACT +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGGTVKN*TKEVAT
Trigger: AGTAGCTACTTCCTTAGTTCAGTTCTTTACTGTTCC...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCATATTTTGATGTGGTATaGAATGCAGCCGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSYFDVV*NAAAMP
Trigger: AGGCATGGCGGCTGCATTTCATACCACATCAAAATA...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAATAGTGTGACTTCATaGCGTATGGGACAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGNSVTS*RMGQKE
Trigger: TTCCTTTTGTCCCATACGTCATGAAGTCACACTATT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CAAGTGAAGAAGGAAAACCTCCTGGTTCGGCAACAAAAGCAGAGCTTTCCTTTTAGGACCTGGCGAATATaGATCACTTCTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: QVKKENLLVRQQKQSFPFRTWRI*ITSSTV
Trigger: TACTGTGGAAGAAGTGATGCATATTCGCCAGGTCCT...AAAAGGAAAGCTCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCTTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR GCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCATCCCAGGCCTTCTTCTaGAGCCTCATAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKASQAFF*SLIALI
Trigger: GATGAGGGCTATGAGGCTGCAGAAGAAGGCCTGGGA...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAATGGCCCACTTTTACATaGAAATACAGACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: LSANEQLADLSRFINRYEWPTFT*KYRPTV
Trigger: AACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCA...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAAAGAACTGGAAGCTATaGCTAAAGTCAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSKNWKL*LKSDQA
Trigger: AGCCTGGTCTGACTTTAGGCATAGCTTCCAGTTCTT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATTCTAATATTCTTTCATaGAGGCTCCGTGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHSNILS*RLRGRG
Trigger: ACCACGGCCACGGAGCCTCCATGAAAGAATATTAGA...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCAACACGCTGCTGCTGCTaGTCGACTTGTGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKATRCCC*STCAAF
Trigger: AAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGT...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCAATGGAATGTCGTCTCTaGGGTGGCTGCCGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKAMECRL*GGCRLS
Trigger: AGAGAGACGGCAGCCACCCCAGAGACGACATTCCAT...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAAGAAGGAAAACCTCCTaGTTCGGCAACAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSRRKTS*FGNKSR
Trigger: TCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCACCACACACACCTCCATaGTGCTCCAGTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKAPHTPP*CSSPPS
Trigger: TGATGGAGGACTGGAGCACCATGGAGGTGTGTGTGG...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAACAGCATTCAGTCTGTaGAACAATGTGATGCGGCAA +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSTAFSL*NNVMRQ
Trigger: TTGCCGCATCACATTGTTCCACAGACTGAATGCTGT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCACAGCACACAACTTCATaGCATCTCTATATGACCGAA +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSQHTTS*HLYMTE
Trigger: TTCGGTCATATAGAGATGTCATGAAGTTGTGTGCTG...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGAGCCTTCCTTTGTCCTaGAACTCCCACACAACTTTA +
Preference number: 4 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKSLPLS*NSHTTL
Trigger: TAAAGTTGTGTGGGAGTTTCAGGACAAAGGAAGGCT...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCATATGAAAAATGTAGCTaGAAACCCATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSYEKCS*KPMSSS
Trigger: GCTGGAGCTCATGGGTTTTCAGCTACATTTTTCATA...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTGCAGATTGTTTCATATaGACGTACCCTCCACGTGAC +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIADCFI*TYPPRD
Trigger: GTCACGTGGAGGGTACGTTCATATGAAACAATCTGC...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGAAGGACCTGGCGAATATaGATCACTTCTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGRTWRI*ITSSTV
Trigger: TACTGTGGAAGAAGTGATGCATATTCGCCAGGTCCT...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGATTGGTTTCAGTTTTCTaGCTGAGACTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGLVSVF*LRLDLK
Trigger: CTTTAAATCCAGTCTCAGCCAGAAAACTGAAACCAA...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGTTGGTTTCAGTTTTCTaGCTGAGACTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: NTRLRRLELMISEMNFLQLVSVF*LRLDLK
Trigger: CTTTAAATCCAGTCTCAGCCAGAAAACTGAAACCAA...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp AACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTGAGGCTCCGTGGCCGTaGTGGAGTTGGTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: NSLGNWSSSSDLSIDLDFEAPWP*WSWFQF
Trigger: AAACTGAAACCAACTCCACCACGGCCACGGAGCCTC...AAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGATATGGGCAGGAATTTTaGAGGCTTCTTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGYGQEF*RLLPCG
Trigger: TCCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATA...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTGTACTCCGAGGGGCCTaGCGAGGACATGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: NSLGNWSSSSDLSIDLDFVLRGA*RGHVER
Trigger: TCTTTCTACATGTCCTCGCCAGGCCCCTCGGAGTAC...AAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATCACGGAAGGAAGAACTaGAAGCTATGCCTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHHGRKN*KLCLKS
Trigger: TGACTTTAGGCATAGCTTCCAGTTCTTCCTTCCGTG...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CAA 72 bp TATGAACGTACCCTCCACGTGACCTCTTTAATGCACTaGGCAAACTCCGTTAATGCTGTTGAAGAATGTATG +
Preference number: 4 (lower is better)
Translates to: YERTLHVTSLMH*ANSVNAVEECM
Trigger: CATACATTCTTCAACAGCATTAACGGAGTTTGCCAAGTGCATTAAAGAGGTCACGTGGAGGGTACGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCATCCATTCACCATAGATaGCTCCACAAGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSSIHHR*LHKILC
Trigger: ACAAAGAATCTTGTGGAGTCATCTATGGTGAATGGA...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCACTGGAGTTCTTCATCTaGTTTGTCCATAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSLEFFI*FVHRLR
Trigger: TCTAAGTCTATGGACAAATCAGATGAAGAACTCCAG...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGACAGCACACAACTTCATaGCATCTCTATATGACCGAA +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGQHTTS*HLYMTE
Trigger: TTCGGTCATATAGAGATGTCATGAAGTTGTGTGCTG...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGATATGAAAAATGTAGCTaGAAACCCATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGYEKCS*KPMSSS
Trigger: GCTGGAGCTCATGGGTTTTCAGCTACATTTTTCATA...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTGAGCTCCATTGTTTCTaGAAACAGTGCACGACATAC +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIELHCF*KQCTTY
Trigger: GTATGTCGTGCACTGTTTGCAGAAACAATGGAGCTC...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATTTTAACTGTGCCATGTaGCCTTTCTTACCCCACTTT +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHFNCAM*PFLPHF
Trigger: AAAGTGGGGTAAGAAAGGGCACATGGCACAGTTAAA...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCATTGGTCAGAAATGTATaGAGCTCCATTGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSLVRNV*SSIVSA
Trigger: TGCAGAAACAATGGAGCTCCATACATTTCTGACCAA...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GCACACCGGCCTCTTACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAATTGGTTTCAGTTTTCTaGCTGAGACTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: AHRPLTELTGIRPSEEGKLVSVF*LRLDLK
Trigger: CTTTAAATCCAGTCTCAGCCAGAAAACTGAAACCAA...TTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGGCCGGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATATAAGGGTTCTCTGGTaGCCCACTTTTACATGCAAA +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHIRVLW*PTFTCK
Trigger: TTTGCATGTAAAAGTGGGCCACCAGAGAACCCTTAT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTCACGGAAGGAAGAACTaGAAGCTATGCCTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIHGRKN*KLCLKS
Trigger: TGACTTTAGGCATAGCTTCCAGTTCTTCCTTCCGTG...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCACAGGGAGTTAAGCCATaGAGAGGGAAGCACAGGTTT +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKAQGVKP*RGKHRF
Trigger: AAACCTGTGCTTCCCTCTCCATGGCTTAACTCCCTG...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTCATAGACTTAGATTTTaGGGAGAACCTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIHRLRF*GEPGNA
Trigger: AGCATTGCCAGGTTCTCCTCAAAATCTAAGTCTATG...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAGCTATGCCTAAAGTCAGACCAGGCTAAGGATTTTAAAACCAAGCTCCACAAGCTGGAGTTCTTCATCTaGTTTGTCCATAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: KLCLKSDQAKDFKTKLHKLEFFI*FVHRLR
Trigger: TCTAAGTCTATGGACAAATCAGATGAAGAACTCCAG...CTTGTGGAGCTTGGTTTTAAAATCCTTAGCCTGGTCTGACTTTAGGCATAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCACTTTGTGAATGTGAATaGAAGTCTTATTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSLCECE*KSYFGG
Trigger: ACCCCCAAAATAAGACTTTCATTCACATTCACAAAG...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATAATAGTGTGACTTCATaGCGTATGGGACAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHNSVTS*RMGQKE
Trigger: TTCCTTTTGTCCCATACGTCATGAAGTCACACTATT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGAATTCCCACTGTCCACTaGATGAATGCCTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGIPTVH*MNAFQI
Trigger: TATTTGAAAGGCATTCATTCAGTGGACAGTGGGAAT...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATTGGCCCACTTTTACATaGAAATACAGACCAACTGTT +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHWPTFT*KYRPTV
Trigger: AACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCA...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTTTGTACTGCCGCTCTTaGACCTTCTTAAGTTTTACC +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNILYCRS*TFLSFT
Trigger: GGTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAA...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCATTGGTTTCAGTTTTCTaGCTGAGACTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACALVSVF*LRLDLK
Trigger: CTTTAAATCCAGTCTCAGCCAGAAAACTGAAACCAA...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTATTTTGAGGAGAACCTaGCAATGCTCCGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: NSLGNWSSSSDLSIDLDFILRRT*QCSEVA
Trigger: GGCCACTTCGGAGCATTGCCAGGTTCTCCTCAAAAT...AAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTCCTCCATCAACTCTTTaGGAAACTGGAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIPPSTL*ETGVLH
Trigger: ATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGG...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCAAGGACCTGGCGAATATaGATCACTTCTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKARTWRI*ITSSTV
Trigger: TACTGTGGAAGAAGTGATGCATATTCGCCAGGTCCT...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR GCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCATCATGTCACCCTGAATaGCAGCAATACCTCGACTTT +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKASCHPE*QQYLDF
Trigger: AAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGA...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTTCTAATATTCTTTCATaGAGGCTCCGTGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: NSLGNWSSSSDLSIDLDFSNILS*RLRGRG
Trigger: ACCACGGCCACGGAGCCTCCATGAAAGAATATTAGA...AAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATAACTCTTTGGGAAACTaGAGTTCTTCATCTGATTTG +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHNSLGN*SSSSDL
Trigger: CAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCACTAGGTACCAAATTGTaGCTTAATTTACTCAAGATG +
Preference number: 4 (lower is better)
Translates to: GADYRHVLWLSGNYCACALGTKL*LNLLKM
Trigger: CATCTTGAGTAAATTAAGCCACAATTTGGTACCTAG...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCATCAATAAGGGTTCTCTaGTGGCCCACTTTTACATGC +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKASIRVL*WPTFTC
Trigger: GCATGTAAAAGTGGGCCACCAGAGAACCCTTATTGA...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
3UTR CAA 72 bp ATCAACTCTTTGGGAAACTGGAGTTCTTCATCTGATTaGTCCATAGACTTAGATTTTGAGGAGAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: INSLGNWSSSSD*SIDLDFEENLA
Trigger: TGCCAGGTTCTCCTCAAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp AACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTAGAAGGAAAACCTCCTaGTTCGGCAACAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NSLGNWSSSSDLSIDLDFRRKTS*FGNKSR
Trigger: TCTGCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCT...AAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CCA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATTACAGACATGTCCTATaGCTTTCAGGAAATTATTGT +
Preference number: 4 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHYRHVL*LSGNYC
Trigger: ACAATAATTTCCTGAAAGCCATAGGACATGTCTGTA...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR TCA 90 bp GAAACCAAACCTACTCACTCAAATCATTTACAAGGAAAACTAGTGCAGAAAGCATGTTTCCATACATTGTaGATATCCCAATTTACCCGC +
Preference number: 4 (lower is better)
Translates to: ETKPTHSNHLQGKLVQKACFHTL*ISQFTR
Trigger: GCGGGTAAATTGGGATATTCACAATGTATGGAAACA...TGCTTTCTGCACTAGTTTTCCTTGTAAATGATTTGAGTGAGTAGGTTTGGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CCA 90 bp AACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTAACTCTTTGGGAAACTaGAGTTCTTCATCTGATTTG +
Preference number: 4 (lower is better)
Translates to: NSLGNWSSSSDLSIDLDFNSLGN*SSSSDL
Trigger: CAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT...AAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS TCA 90 bp CAACTGGGGGCGGCTCTCCCGCGTCGTCGGCCGCGGGCGCCAGGGTaGCGGCGCCGTCCCTCCAGACGCGGATCTGCGCGGCCGAGCGCA +
Preference number: 5 (lower is better)
Translates to: QLGAALPRRRPRAPG*RRRPSRRGSARPSA
Trigger: TGCGCTCGGCCGCGCAGATCCGCGTCTGGAGGGACGGCGCCGTCACCCTGGCGCCCGCGGCCGACGACGCGGGAGAGCCGCCCCCAGTTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACATTGGAGGCTTCTTCCTaGTGGACACGGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTLEASS*WTRPPG
Trigger: TCCTGGAGGCCGTGTCCACAAGGAAGAAGCCTCCAA...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACATCAATGGGCAAAGGGTaGTACTGCCGCTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTSMGKG*YCRSWT
Trigger: GGTCCAAGAGCGGCAGTACAACCCTTTGCCCATTGA...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAGGCAGCCGCATCTTTTaGCAACACTGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTGSRIF*QHCEHT
Trigger: GGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCC...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CAA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCGGCAGCCGCATCTTTTaGCAACACTGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: ERRASPAQCPRARTLTRSGSRIF*QHCEHT
Trigger: GGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCC...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CAA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCTGCTGCTGGTCGACTaGTGCAGCGTTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TTERRASPAQCPRARTLTLLLVD*CSVSSS
Trigger: TGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAG...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAGAGTGGAGTATGGTTaGGAGGGCAGCCGCATCTTT +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTRVEYG*EGSRIF
Trigger: AAAGATGCGGCTGCCCTCCAAACCATACTCCACTCT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACATTCAATCGGGCCCTTTaGTTGGCCAACACCAGACTG +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTFNRAL*LANTRL
Trigger: CAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAA...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTTCAATGGGCAAAGGGTaGTACTGCCGCTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: SPAQCPRARTLTRSTKAASMGKG*YCRSWT
Trigger: GGTCCAAGAGCGGCAGTACAACCCTTTGCCCATTGA...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAACTGCTGCTGGTCGACTaGTGCAGCGTTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RASPAQCPRARTLTRSTKLLLVD*CSVSSS
Trigger: TGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAG...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGGCAGCCGCATCTTTTaGCAACACTGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAGSRIF*QHCEHT
Trigger: GGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCC...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CAA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTAGAGTGGAGTATGGTTaGGAGGGCAGCCGCATCTTT +
Preference number: 5 (lower is better)
Translates to: TTERRASPAQCPRARTLTRVEYG*EGSRIF
Trigger: AAAGATGCGGCTGCCCTCCAAACCATACTCCACTCT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAACTACTTTCCCCTCTTaGCAGAGCAGAAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTTTFPS*QSRRSQ
Trigger: TTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAGT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACTACTTTCCCCTCTTaGCAGAGCAGAAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: ERRASPAQCPRARTLTRSTTFPS*QSRRSQ
Trigger: TTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAGT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACATCCGAAATGAACTTCTaGCAGTCCACACACACCTCC +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTSEMNF*QSTHTS
Trigger: GGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGA...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAATCGGGCCCTTTTGTaGGCCAACACCAGACTGCGC +
Preference number: 5 (lower is better)
Translates to: PAQCPRARTLTRSTKAAENRALL*ANTRLR
Trigger: GCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTTCAATCGGGCCCTTTaGTTGGCCAACACCAGACTG +
Preference number: 5 (lower is better)
Translates to: TTERRASPAQCPRARTLTFNRAL*LANTRL
Trigger: CAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAACTGCTGCTGGTCGACTaGTGCAGCGTTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PAQCPRARTLTRSTKAAELLLVD*CSVSSS
Trigger: TGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAG...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCATCCGAAATGAACTTCTaGCAGTCCACACACACCTCC +
Preference number: 5 (lower is better)
Translates to: ASPAQCPRARTLTRSTKASEMNF*QSTHTS
Trigger: GGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGA...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGAATCGGGCCCTTTTGTaGGCCAACACCAGACTGCGC +
Preference number: 5 (lower is better)
Translates to: AQCPRARTLTRSTKAAERNRALL*ANTRLR
Trigger: GCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGAATCGGGCCCTTTTGTaGGCCAACACCAGACTGCGC +
Preference number: 5 (lower is better)
Translates to: CPRARTLTRSTKAAERHENRALL*ANTRLR
Trigger: GCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS TCA 90 bp CTTCCTCAGACTCAGAGCTGTCCAGTTCGGCCAGAGTTGGGGCTCTaGGGAGCTTCTTCCGCTGTGCAGGCACCTGCTGTGAGGTACTTA +
Preference number: 5 (lower is better)
Translates to: LPQTQSCPVRPELGL*GASSAVQAPAVRYL
Trigger: TAAGTACCTCACAGCAGGTGCCTGCACAGCGGAAGAAGCTCCTCAGAGCCCCAACTCTGGCCGAACTGGACAGCTCTGAGTCTGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000464481.5
CDS-3UTR CAA 90 bp AGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAATGTATGGAGCTCCATaGTTTCTGCAAACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: RRASPAQCPRARTLTRSTMYGAP*FLQTVH
Trigger: GTGCACTGTTTGCAGAAACAATGGAGCTCCATACAT...TGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCGTTGTACTGCCGCTCTaGGACCTTCTTAAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: ERRASPAQCPRARTLTRSVVLPL*DLLKFY
Trigger: GTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAAC...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTCAATGGGCAAAGGGTaGTACTGCCGCTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: AQCPRARTLTRSTKAAERSMGKG*YCRSWT
Trigger: GGTCCAAGAGCGGCAGTACAACCCTTTGCCCATTGA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAATATGGGCAGGAATTTaGGAGGCTTCTTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAIWAGI*EASSLW
Trigger: CCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATAT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCAGCACCCCAAAAATGTaGCCTGTCAGCAGGTTAATT +
Preference number: 5 (lower is better)
Translates to: ERRASPAQCPRARTLTRSSTPKM*PVSRLI
Trigger: AATTAACCTGCTGACAGGCAACATTTTTGGGGTGCT...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCCCCACTTTCTGCAGATaGTTTCATATGAACGTACCC +
Preference number: 5 (lower is better)
Translates to: ERRASPAQCPRARTLTRSPTFCR*FHMNVP
Trigger: GGGTACGTTCATATGAAACAATCTGCAGAAAGTGGG...GCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTGTTGTACTGCCGCTCTaGGACCTTCTTAAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: TTERRASPAQCPRARTLTVVLPL*DLLKFY
Trigger: GTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAAC...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCACGCAAGGTGTATCTTTaGCAGCGAATGTCATCCATT +
Preference number: 5 (lower is better)
Translates to: ASPAQCPRARTLTRSTKARKVYL*QRMSSI
Trigger: AATGGATGACATTCGCTGCAAAAGATACACCTTGCG...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTATATGGGCAGGAATTTaGGAGGCTTCTTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAIWAGI*EASSLW
Trigger: CCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATAT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGAGAGTGGAGTATGGTTaGGAGGGCAGCCGCATCTTT +
Preference number: 5 (lower is better)
Translates to: CPRARTLTRSTKAAERHERVEYG*EGSRIF
Trigger: AAAGATGCGGCTGCCCTCCAAACCATACTCCACTCT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000453447.6
CDS-3UTR CAA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAACTACTTTCCCCTCTTaGCAGAGCAGAAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: PAQCPRARTLTRSTKAAETTFPS*QSRRSQ
Trigger: TTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAGT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTTCAATCGGGCCCTTTaGTTGGCCAACACCAGACTG +
Preference number: 5 (lower is better)
Translates to: AQCPRARTLTRSTKAAERFNRAL*LANTRL
Trigger: CAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGTTCAATCGGGCCCTTTaGTTGGCCAACACCAGACTG +
Preference number: 5 (lower is better)
Translates to: CPRARTLTRSTKAAERHEFNRAL*LANTRL
Trigger: CAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAA...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTAACACACTGAGACATTaGAGGCATACAATGCTACCC +
Preference number: 5 (lower is better)
Translates to: TTERRASPAQCPRARTLTNTLRH*RHTMLP
Trigger: GGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCCCACTTTCTGCAGATaGTTTCATATGAACGTACCC +
Preference number: 5 (lower is better)
Translates to: TTERRASPAQCPRARTLTPTFCR*FHMNVP
Trigger: GGGTACGTTCATATGAAACAATCTGCAGAAAGTGGG...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTATGTATGGAGCTCCATaGTTTCTGCAAACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAMYGAP*FLQTVH
Trigger: GTGCACTGTTTGCAGAAACAATGGAGCTCCATACAT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTCGCAAGGTGTATCTTTaGCAGCGAATGTCATCCATT +
Preference number: 5 (lower is better)
Translates to: SPAQCPRARTLTRSTKAARKVYL*QRMSSI
Trigger: AATGGATGACATTCGCTGCAAAAGATACACCTTGCG...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAACGCAAGGTGTATCTTTaGCAGCGAATGTCATCCATT +
Preference number: 5 (lower is better)
Translates to: RASPAQCPRARTLTRSTKRKVYL*QRMSSI
Trigger: AATGGATGACATTCGCTGCAAAAGATACACCTTGCG...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGACTACTTTCCCCTCTTaGCAGAGCAGAAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: CPRARTLTRSTKAAERHETTFPS*QSRRSQ
Trigger: TTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAGT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTCCGAAATGAACTTCTaGCAGTCCACACACACCTCC +
Preference number: 5 (lower is better)
Translates to: AQCPRARTLTRSTKAAERSEMNF*QSTHTS
Trigger: GGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAACCTCTTTAATGCACTaGGCAAACTCCGTTAATGCT +
Preference number: 5 (lower is better)
Translates to: ASPAQCPRARTLTRSTKATSLMH*ANSVNA
Trigger: AGCATTAACGGAGTTTGCCAAGTGCATTAAAGAGGT...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp CCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAATGTATGGAGCTCCATaGTTTCTGCAAACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: PAQCPRARTLTRSTKAAEMYGAP*FLQTVH
Trigger: GTGCACTGTTTGCAGAAACAATGGAGCTCCATACAT...TTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCATTCGCACTCTTAATTTaGGTCAGAAATGTATGGAGC +
Preference number: 5 (lower is better)
Translates to: ASPAQCPRARTLTRSTKAFALLI*VRNVWS
Trigger: GCTCCATACATTTCTGACCAAAATTAAGAGTGCGAA...TGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGATATGGGCAGGAATTTaGGAGGCTTCTTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: CPRARTLTRSTKAAERHEIWAGI*EASSLW
Trigger: CCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATAT...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTGGCAGCCGCATCTTTTaGCAACACTGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: NRALLLANTRLRRLELMIGSRIF*QHCEHT
Trigger: GGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCC...AATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CAA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGTAAGTTTCAAACTGTaGTCCTCTCTCAGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SPAQCPRARTLTRSTKAAVSFKL*SSLSAN
Trigger: GTTTGCACTGAGAGAGGACAACAGTTTGAAACTTAC...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp AGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTACCTCTTTAATGCACTaGGCAAACTCCGTTAATGCT +
Preference number: 5 (lower is better)
Translates to: SPAQCPRARTLTRSTKAATSLMH*ANSVNA
Trigger: AGCATTAACGGAGTTTGCCAAGTGCATTAAAGAGGT...AGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS GCA 90 bp CTAGGAACAAGAGAGCGGGAACTCTGCCTGGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTTTCCTTTTCAATGGAATGTCGTCTC +
Preference number: 5 (lower is better)
Translates to: LGTRERELCLEGGRN*LTLVGVSFSMECRL
Trigger: GAGACGACATTCCATTGAAAAGGAAACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCTTGTTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464481.5
CDS-3UTR CAA 90 bp TGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGCACGAGGTTGTACTGCCGCTCTaGGACCTTCTTAAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: CPRARTLTRSTKAAERHEVVLPL*DLLKFY
Trigger: GTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAAC...CTCGTGCCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp ACCACAGAAAGGAGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTTTAACCCGTTTTCTTTaGTTTGTGATGTCAAACCTC +
Preference number: 5 (lower is better)
Translates to: TTERRASPAQCPRARTLTLTRFL*FVMSNL
Trigger: GAGGTTTGACATCACAAACAAAAGAAAACGGGTTAA...AGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCTCCTTTCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAAGAGTGGAGTATGGTTaGGAGGGCAGCCGCATCTTT +
Preference number: 5 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTRVEYG*EGSRIF
Trigger: AAAGATGCGGCTGCCCTCCAAACCATACTCCACTCT...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp AGAACCTGGCAATGCTCCGAAGTGGCCGATGATGGGCAGTGGAGGGTTTTTCTGACTACTTTCCCCTCTTaGCAGAGCAGAAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: RTWQCSEVADDGQWRVFLTTFPS*QSRRSQ
Trigger: TTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAGT...CAGAAAAACCCTCCACTGCCCATCATCGGCCACTTCGGAGCATTGCCAGGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CAA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAAGTGCAAACGAGCAATaGGCGGACCTGTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTSANEQ*ADLSRF
Trigger: GAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACT...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAACTCCGTTAATGCTGTaGAAGAATGTATGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: RASPAQCPRARTLTRSTKTPLML*KNVCSV
Trigger: CACAGAACATACATTCTTCAACAGCATTAACGGAGT...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS GCA 90 bp AATTCCTCAAGAGAGCGGGAACTCTGCCTGGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTTTCCTTTTCAATGGAATGTCGTCTC +
Preference number: 5 (lower is better)
Translates to: NSSRERELCLEGGRN*LTLVGVSFSMECRL
Trigger: GAGACGACATTCCATTGAAAAGGAAACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCTTGAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AGAGCCAGCCCGGCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAATTAACCCGTTTTCTTTaGTTTGTGATGTCAAACCTC +
Preference number: 5 (lower is better)
Translates to: RASPAQCPRARTLTRSTKLTRFL*FVMSNL
Trigger: GAGGTTTGACATCACAAACAAAAGAAAACGGGTTAA...TTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGCCGGGCTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp AACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTTGCAGTTGGAGGCTTCTTCCTaGTGGACACGGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: NTRLRRLELMISEMNFLQLEASS*WTRPPG
Trigger: TCCTGGAGGCCGTGTCCACAAGGAAGAAGCCTCCAA...CTGCAAGAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CAA 90 bp TTCCTTTTCAATCGGGCCCTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAATCCGAAATGAACTTCTaGCAGTCCACACACACCTCC +
Preference number: 5 (lower is better)
Translates to: FLFNRALLLANTRLRRLESEMNF*QSTHTS
Trigger: GGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGA...TTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CAA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAATCAATGGGCAAAGGGTaGTACTGCCGCTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: LSANEQLADLSRFINRYESMGKG*YCRSWT
Trigger: GGTCCAAGAGCGGCAGTACAACCCTTTGCCCATTGA...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GCACACCGGCCTCTTACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAAAATCGGGCCCTTTTGTaGGCCAACACCAGACTGCGC +
Preference number: 5 (lower is better)
Translates to: AHRPLTELTGIRPSEEGKNRALL*ANTRLR
Trigger: GCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT...TTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGGCCGGTGTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CAA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGACCCTAGGTACCAAATaGTGGCTTAATTTACTCAAG +
Preference number: 5 (lower is better)
Translates to: AQCPRARTLTRSTKAAERTLGTK*WLNLLK
Trigger: CTTGAGTAAATTAAGCCACAATTTGGTACCTAGGGT...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GCCTGGCGAGGACATGTAGAAAGACTGCGTTTTCCTTTTCAATCGGGCCCTTTTAGAGTGGAGTATGGTTaGGAGGGCAGCCGCATCTAT +
Preference number: 5 (lower is better)
Translates to: AWRGHVERLRFPFQSGPFRVEYG*EGSRIY
Trigger: ATAGATGCGGCTGCCCTCCAAACCATACTCCACTCT...AAAAGGGCCCGATTGAAAAGGAAAACGCAGTCTTTCTACATGTCCTCGCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CAA 90 bp GCTCAGTGTCCTCGCGCACGGACGCTGACTCGTAGCACAAAAGCAGCTGAAAGGTTAACCCGTTTTCTTTaGTTTGTGATGTCAAACCTC +
Preference number: 5 (lower is better)
Translates to: AQCPRARTLTRSTKAAERLTRFL*FVMSNL
Trigger: GAGGTTTGACATCACAAACAAAAGAAAACGGGTTAA...CCTTTCAGCTGCTTTTGTGCTACGAGTCAGCGTCCGTGCGCGAGGACACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
CDS-3UTR CAA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCATTGGAGGCTTCTTCCTaGTGGACACGGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GADYRHVLWLSGNYCACALEASS*WTRPPG
Trigger: TCCTGGAGGCCGTGTCCACAAGGAAGAAGCCTCCAA...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GCATCTTTTTGCAACACTGTGAGCACACCGGCCTCTTACAGAACTGACAGGTATAGAGTGGAGTATGGTTaGGAGGGCAGCCGCATCTTT +
Preference number: 5 (lower is better)
Translates to: ASFCNTVSTPASYRTDRYRVEYG*EGSRIF
Trigger: AAAGATGCGGCTGCCCTCCAAACCATACTCCACTCT...ATACCTGTCAGTTCTGTAAGAGGCCGGTGTGCTCACAGTGTTGCAAAAAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CAA 90 bp TTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGAACTTCTCCGAAATGAACTTCTaGCAGTCCACACACACCTCC +
Preference number: 5 (lower is better)
Translates to: LANTRLRRLELMISEMNFSEMNF*QSTHTS
Trigger: GGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGA...GAAGTTCATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440472.6
ENST00000592156.5
CDS-3UTR CAA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCAAATCGGGCCCTTTTGTaGGCCAACACCAGACTGCGC +
Preference number: 5 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSNRALL*ANTRLR
Trigger: GCGCAGTCTGGTGTTGGCCAACAAAAGGGCCCGATT...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp AACACACTGAGACATTTGAGGCATACAATGCTACCCTCCAGTCTACTTTCGTCATCGTTGATGGGCTGGTaGTACAGCCGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: NTLRHLRHTMLPSSLLSSSLMGW*YSRRIS
Trigger: GGAGATCCTGCGGCTGTACAACCAGCCCATCAACGA...TGACGAAAGTAGACTGGAGGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGTGCAAACGAGCAATaGGCGGACCTGTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGSANEQ*ADLSRF
Trigger: GAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATTTGGAGGCTTCTTCCTaGTGGACACGGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHLEASS*WTRPPG
Trigger: TCCTGGAGGCCGTGTCCACAAGGAAGAAGCCTCCAA...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp CTTTTGTTGGCCAACACCAGACTGCGCCGGCTTGAACTGATGATTTCCGAAATGATATGGGCAGGAATTTaGGAGGCTTCTTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: LLLANTRLRRLELMISEMIWAGI*EASSLW
Trigger: CCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATAT...CATTTCGGAAATCATCAGTTCAAGCCGGCGCAGTCTGGTGTTGGCCAACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CAA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGATCCGAAATGAACTTCTaGCAGTCCACACACACCTCC +
Preference number: 5 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGSEMNF*QSTHTS
Trigger: GGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGA...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp ACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAACCTCCTGGTTCGGCATTCAATCGGGCCCTTTaGTTGGCCAACACCAGACTG +
Preference number: 5 (lower is better)
Translates to: TELTGIRPSEEGKPPGSAFNRAL*LANTRL
Trigger: CAGTCTGGTGTTGGCCAACAAAAGGGCCCGATTGAA...TGCCGAACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CAA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGATCGTTGATGGGCTGGTaGTACAGCCGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGSLMGW*YSRRIS
Trigger: GGAGATCCTGCGGCTGTACAACCAGCCCATCAACGA...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp CAGTCCTCCATCAACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATATCAATGGGCAAAGGGTaGTACTGCCGCTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: QSSINSLGNWSSSSDLSISMGKG*YCRSWT
Trigger: GGTCCAAGAGCGGCAGTACAACCCTTTGCCCATTGA...TATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTTGATGGAGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CAA 90 bp CCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAAGCGCAAGGTGTATCTTTaGCAGCGAATGTCATCCATT +
Preference number: 5 (lower is better)
Translates to: PSCHPECQQYLDFYTRRKRKVYL*QRMSSI
Trigger: AATGGATGACATTCGCTGCAAAAGATACACCTTGCG...CTTCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATCTGCTGCTGGTCGACTaGTGCAGCGTTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHLLLVD*CSVSSS
Trigger: TGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAG...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp ACAGAACTGACAGGTATAAGACCAAGTGAAGAAGGAAAACCTCCTGGTTCGGCAACTACTTTCCCCTCTTaGCAGAGCAGAAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: TELTGIRPSEEGKPPGSATTFPS*QSRRSQ
Trigger: TTGGGACCTTCTGCTCTGCAAAGAGGGGAAAGTAGT...TGCCGAACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592156.5
CDS-3UTR CAA 90 bp GAGAATGAAGACCTGTCATCCACTCAGGAGACACTGAACCAGGGCACTGGGACAACCCTAGGTACCAAATaGTGGCTTAATTTACTCAAG +
Preference number: 5 (lower is better)
Translates to: ENEDLSSTQETLNQGTGTTLGTK*WLNLLK
Trigger: CTTGAGTAAATTAAGCCACAATTTGGTACCTAGGGT...TGTCCCAGTGCCCTGGTTCAGTGTCTCCTGAGTGGATGACAGGTCTTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTGGCAGCCGCATCTTTTaGCAACACTGTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIGSRIF*QHCEHT
Trigger: GGTGTGCTCACAGTGTTGCAAAAAGATGCGGCTGCC...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp CTCAGTGCAAACGAGCAATTGGCGGACCTGTCACGTTTCATCAATCGATACGAAAACACACTGAGACATTaGAGGCATACAATGCTACCC +
Preference number: 5 (lower is better)
Translates to: LSANEQLADLSRFINRYENTLRH*RHTMLP
Trigger: GGGTAGCATTGTATGCCTCAAATGTCTCAGTGTGTT...TTCGTATCGATTGATGAAACGTGACAGGTCCGCCAATTGCTCGTTTGCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS TCA 90 bp TGCAAACAGTGCACGACATACTGCCTGATAATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGCAGCACACAACTCTGTTTCCATACA +
Preference number: 5 (lower is better)
Translates to: CKQCTTYCLIMIWCI*FSREMSSTQLCFHT
Trigger: TGTATGGAAACAGAGTTGTGTGCTGCTCATCTCCCTACTGAATCAGATGCACCAAATCATTATCAGGCAGTATGTCGTGCACTGTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309836.9
CDS TCA 90 bp TGTATCTTTTGCAGCGAATGTCATCCATTAACATCTCATAAGGGGTaGGCTGATATTCAATGGGCAAAGGGTTGTACTGCCGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: CIFCSECHPLTSHKG*ADIQWAKGCTAALG
Trigger: TCCAAGAGCGGCAGTACAACCCTTTGCCCATTGAATATCAGCTCACCCCTTATGAGATGTTAATGGATGACATTCGCTGCAAAAGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000487491.1
CDS TCA 90 bp TGCAAACAGTGCACGACATACTGCCTGATAATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGCAGCACACAACTTCATGACATCTCT +
Preference number: 5 (lower is better)
Translates to: CKQCTTYCLIMIWCI*FSREMSSTQLHDIS
Trigger: AGAGATGTCATGAAGTTGTGTGCTGCTCATCTCCCTACTGAATCAGATGCACCAAATCATTATCAGGCAGTATGTCGTGCACTGTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000449797.5
ENST00000453447.6
ENST00000462226.1
ENST00000497844.6
CDS-3UTR CAA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATATATGGGCAGGAATTTaGGAGGCTTCTTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHIWAGI*EASSLW
Trigger: CCACAAGGAAGAAGCCTCCAAAATTCCTGCCCATAT...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GGTGCTGACTACAGACATGTCCTATGGCTTTCAGGAAATTATTGTGCATGTGCAAGCACCCCAAAAATGTaGCCTGTCAGCAGGTTAATT +
Preference number: 5 (lower is better)
Translates to: GADYRHVLWLSGNYCACASTPKM*PVSRLI
Trigger: AATTAACCTGCTGACAGGCAACATTTTTGGGGTGCT...TGCACATGCACAATAATTTCCTGAAAGCCATAGGACATGTCTGTAGTCAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGAACTCCGTTAATGCTGTaGAAGAATGTATGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGTPLML*KNVCSV
Trigger: CACAGAACATACATTCTTCAACAGCATTAACGGAGT...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp GTTCTCTGGTGGCCCACTTTTACATGCAAATACAGACCAACTGTTAACATGCATGTTGTACTGCCGCTCTaGGACCTTCTTAAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: VLWWPTFTCKYRPTVNMHVVLPL*DLLKFY
Trigger: GTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAAC...ATGCATGTTAACAGTTGGTCTGTATTTGCATGTAAAAGTGGGCCACCAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp TACCATCATGTCACCCTGAATGCCAGCAATACCTCGACTTTTACACACGCAGGATTAACCCGTTTTCTTTaGTTTGTGATGTCAAACCTC +
Preference number: 5 (lower is better)
Translates to: YHHVTLNASNTSTFTHAGLTRFL*FVMSNL
Trigger: GAGGTTTGACATCACAAACAAAAGAAAACGGGTTAA...TCCTGCGTGTGTAAAAGTCGAGGTATTGCTGGCATTCAGGGTGACATGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS GCA 90 bp CGCACTCTTAATTTTGGTCAGAAATGTATGGAGCTCCATTGTTTCTaGAAACAGTGCACGACATACTGCCTGATAATGATTTGGTGCATC +
Preference number: 5 (lower is better)
Translates to: RTLNFGQKCMELHCF*KQCTTYCLIMIWCI
Trigger: GATGCACCAAATCATTATCAGGCAGTATGTCGTGCACTGTTTGCAGAAACAATGGAGCTCCATACATTTCTGACCAAAATTAAGAGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000449797.5
ENST00000453447.6
ENST00000462226.1
ENST00000497844.6
CDS-3UTR CAA 90 bp TGCCTTGGGAGAGTTAATTCCCACTGTCCACTGAATGAATGCCTTTCAAATATTATGTATGGAGCTCCATaGTTTCTGCAAACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: CLGRVNSHCPLNECLSNIMYGAP*FLQTVH
Trigger: GTGCACTGTTTGCAGAAACAATGGAGCTCCATACAT...AATATTTGAAAGGCATTCATTCAGTGGACAGTGGGAATTAACTCTCCCAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS-3UTR CAA 90 bp ACTGATGATTTCCGAAATGAACTTCTTGCAGTCCACACACACCTCCATGGTGCTTTAACCCGTTTTCTTTaGTTTGTGATGTCAAACCTC +
Preference number: 5 (lower is better)
Translates to: TDDFRNELLAVHTHLHGALTRFL*FVMSNL
Trigger: GAGGTTTGACATCACAAACAAAAGAAAACGGGTTAA...AGCACCATGGAGGTGTGTGTGGACTGCAAGAAGTTCATTTCGGAAATCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS-3UTR CAA 90 bp AAAAGTAAGTTTCAAACTGTTGTCCTCTCTCAGTGCAAACGAGCAATTGGCGGAGTAAGTTTCAAACTGTaGTCCTCTCTCAGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: KSKFQTVVLSQCKRAIGGVSFKL*SSLSAN
Trigger: GTTTGCACTGAGAGAGGACAACAGTTTGAAACTTAC...TCCGCCAATTGCTCGTTTGCACTGAGAGAGGACAACAGTTTGAAACTTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS GCA 90 bp CCATACATTGTGAATATCCCAATTTACCTGCTATACAGCAAGTCTTaGCACTTGACATATATTATCCTCACTTATGCCCCAATCCTCTCA +
Preference number: 5 (lower is better)
Translates to: PYIVNIPIYLLYSKS*HLTYIILTYAPILS
Trigger: TGAGAGGATTGGGGCATAAGTGAGGATAATATATGTCAAGTGGCAAGACTTGCTGTATAGCAGGTAAATTGGGATATTCACAATGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497844.6
CDS-3UTR CAA 90 bp AACTCTTTGGGAAACTGGAGTTCTTCATCTGATTTGTCCATAGACTTAGATTTTCGCAAGGTGTATCTTTaGCAGCGAATGTCATCCATT +
Preference number: 5 (lower is better)
Translates to: NSLGNWSSSSDLSIDLDFRKVYL*QRMSSI
Trigger: AATGGATGACATTCGCTGCAAAAGATACACCTTGCG...AAAATCTAAGTCTATGGACAAATCAGATGAAGAACTCCAGTTTCCCAAAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS GCA 72 bp CGGGCCAGCCGCCTGAGCCATCCCGCGGGTGGGCGCTaGGCTCGGCAGTCGCGCCGTGTGCCGGCGTCTCCT +
Preference number: 6 (lower is better)
Translates to: RASRLSHPAGGR*ARQSRRVPASP
Trigger: AGGAGACGCCGGCACACGGCGCGACTGCCGAGCGCAGCGCCCACCCGCGGGATGGCTCAGGCGGCTGGCCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS GCA 72 bp CCGCGGGTGGGCGCTGCGCTCGGCAGTCGCGCCGTGTaGCGGCGTCTCCTCAGCTCCGGAGCATCGTCGTCG +
Preference number: 6 (lower is better)
Translates to: PRVGAALGSRAV*RRLLSSGASSS
Trigger: CGACGACGATGCTCCGGAGCTGAGGAGACGCCGGCACACGGCGCGACTGCCGAGCGCAGCGCCCACCCGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS TCA 72 bp ACTCAGAGCTGTCCAGTTCGGCCAGAGTTGGGGCTCTaGGGAGCTTCTTCCGCTGTGCAGGCACCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: TQSCPVRPELGL*GASSAVQAPAV
Trigger: CACAGCAGGTGCCTGCACAGCGGAAGAAGCTCCTCAGAGCCCCAACTCTGGCCGAACTGGACAGCTCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000464481.5
CDS GCA 72 bp GGACTGGCTCTTCAGGGAAAGAGGGAGACACGCTGCTaGTGCTGGTCGACTTGTGCAGCGTTTCTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: GLALQGKRETRC*CWSTCAAFLPQ
Trigger: CTGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTTTCCCTGAAGAGCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000464481.5
CDS CAA 72 bp GGGAAAGAGGGAGACACGCTGCTGCTGCTGGTCGACTaGTGCAGCGTTTCTTCCTCAGACTCAGAGCTGTCC +
Preference number: 6 (lower is better)
Translates to: GKEGDTLLLLVD*CSVSSSDSELS
Trigger: GGACAGCTCTGAGTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000464481.5
CDS GCA 72 bp CTGGCTCTTCAGGGAAAGAGGGAGACACGCTGCTGCTaGTGGTCGACTTGTGCAGCGTTTCTTCCTCAGACT +
Preference number: 6 (lower is better)
Translates to: LALQGKRETRCC*WSTCAAFLPQT
Trigger: AGTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTTTCCCTGAAGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000464481.5
CDS CCA 72 bp GCTCTTCAGGGAAAGAGGGAGACACGCTGCTGCTGCTaGTCGACTTGTGCAGCGTTTCTTCCTCAGACTCAG +
Preference number: 6 (lower is better)
Translates to: ALQGKRETRCCC*STCAAFLPQTQ
Trigger: CTGAGTCTGAGGAAGAAACGCTGCACAAGTCGACCAGCAGCAGCAGCGTGTCTCCCTCTTTCCCTGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000464481.5
CDS GCA 72 bp AGAGAGCGGGAACTCTGCCTGGAAGGCGGCAGGAACTaGCTCACGTTAGTAGGCGTTTCCTTTTCAATGGAA +
Preference number: 6 (lower is better)
Translates to: RERELCLEGGRN*LTLVGVSFSME
Trigger: TTCCATTGAAAAGGAAACGCCTACTAACGTGAGGCAGTTCCTGCCGCCTTCCAGGCAGAGTTCCCGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000464481.5
CDS TCA 72 bp TCCCAAAGATTCAATGACCTCTGTTTCCATACATTGTaGATATCCCAATTTACCCGCAACTGGGGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SQRFNDLCFHTL*ISQFTRNWGRL
Trigger: GAGCCGCCCCCAGTTGCGGGTAAATTGGGATATTCACAATGTATGGAAACAGAGGTCATTGAATCTTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409402.8
ENST00000410092.7
CDS TCA 72 bp TGCACGACATACTGCCTGATAATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGCAGCACACAACTCTGT +
Preference number: 6 (lower is better)
Translates to: CTTYCLIMIWCI*FSREMSSTQLC
Trigger: ACAGAGTTGTGTGCTGCTCATCTCCCTACTGAATCAGATGCACCAAATCATTATCAGGCAGTATGTCGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309836.9
CDS TCA 72 bp TGCAGCGAATGTCATCCATTAACATCTCATAAGGGGTaGGCTGATATTCAATGGGCAAAGGGTTGTACTGCC +
Preference number: 6 (lower is better)
Translates to: CSECHPLTSHKG*ADIQWAKGCTA
Trigger: GGCAGTACAACCCTTTGCCCATTGAATATCAGCTCACCCCTTATGAGATGTTAATGGATGACATTCGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000449797.5
ENST00000453447.6
ENST00000487491.1
CDS TCA 72 bp TGCACGACATACTGCCTGATAATGATTTGGTGCATCTaGTTCAGTAGGGAGATGAGCAGCACACAACTTCAT +
Preference number: 6 (lower is better)
Translates to: CTTYCLIMIWCI*FSREMSSTQLH
Trigger: ATGAAGTTGTGTGCTGCTCATCTCCCTACTGAATCAGATGCACCAAATCATTATCAGGCAGTATGTCGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000449797.5
ENST00000453447.6
ENST00000462226.1
ENST00000497844.6
CDS TCA 72 bp AGTCACTCTTACAGAACTGACAGGTATAAGACCAAGTaGAGAAGGAAAACCTCCTGGTTCGGCAACAAAAGC +
Preference number: 6 (lower is better)
Translates to: SHSYRTDRYKTK*RRKTSWFGNKS
Trigger: GCTTTTGTTGCCGAACCAGGAGGTTTTCCTTCTTCACTTGGTCTTATACCTGTCAGTTCTGTAAGAGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440472.6
CDS CAA 72 bp CTGATATTCAATGGGCAAAGGGTTGTACTGCCGCTCTaGGACCTTCTTAAGTTTTACCCCATTCCTCAAATC +
Preference number: 6 (lower is better)
Translates to: LIFNGQRVVLPL*DLLKFYPIPQI
Trigger: GATTTGAGGAATGGGGTAAAACTTAAGAAGGTCCAAGAGCGGCAGTACAACCCTTTGCCCATTGAATATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000449797.5
ENST00000453447.6
ENST00000487491.1
CDS GCA 72 bp CACCATTCACCATCACTTTTCGCAAGGTGTATCTTTTaGAGCGAATGTCATCCATTAACATCTCATAAGGGG +
Preference number: 6 (lower is better)
Translates to: HHSPSLFARCIF*SECHPLTSHKG
Trigger: CCCCTTATGAGATGTTAATGGATGACATTCGCTGCAAAAGATACACCTTGCGAAAAGTGATGGTGAATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000453447.6
ENST00000487491.1
CDS TCA 72 bp TCCCAATTTACCTGCTATACAGCAAGTCTTGCCACTTaGCATATATTATCCTCACTTATGCCCCAATCCTCT +
Preference number: 6 (lower is better)
Translates to: SQFTCYTASLAT*HILSSLMPQSS
Trigger: AGAGGATTGGGGCATAAGTGAGGATAATATATGTCAAGTGGCAAGACTTGCTGTATAGCAGGTAAATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497844.6
CDS CAA 90 bp TCCATACATTGTGAATATCCCAATTTACCTGCTATACAGCAAGTCTaGCCACTTGACATATATTATCCTCACTTATGCCCCAATCCTCTC +
Preference number: 6 (lower is better)
Translates to: SIHCEYPNLPAIQQV*PLDIYYPHLCPNPL
Trigger: GAGAGGATTGGGGCATAAGTGAGGATAATATATGTCAAGTGGCAAGACTTGCTGTATAGCAGGTAAATTGGGATATTCACAATGTATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497844.6
CDS GCA 72 bp GTGAATATCCCAATTTACCTGCTATACAGCAAGTCTTaGCACTTGACATATATTATCCTCACTTATGCCCCA +
Preference number: 6 (lower is better)
Translates to: VNIPIYLLYSKS*HLTYIILTYAP
Trigger: TGGGGCATAAGTGAGGATAATATATGTCAAGTGGCAAGACTTGCTGTATAGCAGGTAAATTGGGATATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497844.6
CDS CAA 72 bp TGTGAATATCCCAATTTACCTGCTATACAGCAAGTCTaGCCACTTGACATATATTATCCTCACTTATGCCCC +
Preference number: 6 (lower is better)
Translates to: CEYPNLPAIQQV*PLDIYYPHLCP
Trigger: GGGGCATAAGTGAGGATAATATATGTCAAGTGGCAAGACTTGCTGTATAGCAGGTAAATTGGGATATTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497844.6
CDS GCA 72 bp AATTTTGGTCAGAAATGTATGGAGCTCCATTGTTTCTaGAAACAGTGCACGACATACTGCCTGATAATGATT +
Preference number: 6 (lower is better)
Translates to: NFGQKCMELHCF*KQCTTYCLIMI
Trigger: AATCATTATCAGGCAGTATGTCGTGCACTGTTTGCAGAAACAATGGAGCTCCATACATTTCTGACCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000449797.5
ENST00000453447.6
ENST00000462226.1
ENST00000497844.6
CDS CAA 90 bp ATTGTGAATATCCCAATTTACCTGCTATACAGCAAGTCTTGCCACTaGACATATATTATCCTCACTTATGCCCCAATCCTCTCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: IVNIPIYLLYSKSCH*TYIILTYAPILSKE
Trigger: TTCTTTTGAGAGGATTGGGGCATAAGTGAGGATAATATATGTCAAGTGGCAAGACTTGCTGTATAGCAGGTAAATTGGGATATTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497844.6
CDS TCA 72 bp TCCCAAAGATTCAATGACCTCTGTTTCCATACATTGTaGATATCCCAATTTACCTGCTATACAGCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: SQRFNDLCFHTL*ISQFTCYTASL
Trigger: AAGACTTGCTGTATAGCAGGTAAATTGGGATATTCACAATGTATGGAAACAGAGGTCATTGAATCTTTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497844.6
CDS CAA 72 bp CAAGTCTGTGCTAGATTCATCGCTCTTTTCCATTTCTaGAATCTTCTTAAGATTCTCTTTCGCACTCTTAAT +
Preference number: 6 (lower is better)
Translates to: QVCARFIALFHF*NLLKILFRTLN
Trigger: ATTAAGAGTGCGAAAGAGAATCTTAAGAAGATTCAAGAAATGGAAAAGAGCGATGAATCTAGCACAGACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309836.9
ENST00000409402.8
ENST00000410092.7
ENST00000440472.6
ENST00000449797.5
ENST00000453447.6