Pregenerated sensors for SPINT4 (Homo sapiens)
Ensembl gene IDs: ENSG00000149651Ensembl transcript IDs: ENST00000279058.4
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCAGCTTGGCAGACTTCATaGTGCAGCAAGCAGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: EFSCVFISDGAADNFMSSAWQTS*CSKQQA Trigger: TGCCTGCTGCTTGCTGCACCATGAAGTCTGCCAAGC...TGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR TCA 90 bp | CAGTCTGAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGCAGCAGACAACTTCATaGGTTCACATCCTCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: QSEFSCVFISDGAADNFMQQTTS*VHILSP Trigger: AGGTGAGAGGATGTGAACTCATGAAGTTGTCTGCTG...CATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTCAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR GCA 90 bp | TCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCACATCCTCTTTATTTCGGATGGTaGAGCAGACAACTTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SCVFISDGAADNFMSSHPLYFGW*SRQLHE Trigger: CTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAG...AGGATGTGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CCA 90 bp | TTCAAAATCAGTCTGAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAGAAGAAATCCCAGCTTaGCAGACTTCATGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FKISLNFLVSLFRMVQQTEEIPA*QTSWCS Trigger: GCTGCACCATGAAGTCTGCCAAGCTGGGATTTCTTC...TGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTCAGACTGATTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR GCA 90 bp | GAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCACGGTGGTTTGTATTTTaGAACACAGGCTACTTCACG | + |
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Preference number: 4 (lower is better) Translates to: EFSCVFISDGAADNFMSSRWFVF*NTGYFT Trigger: CGTGAAGTAGCCTGTGTTGCAAAATACAAACCACCG...TGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CCA 90 bp | GAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCAATCCTCTCACCTCGGTaGTTTGTATTTTGCAACACA | + |
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Preference number: 4 (lower is better) Translates to: EFSCVFISDGAADNFMSSILSPR*FVFCNT Trigger: TGTGTTGCAAAATACAAACCACCGAGGTGAGAGGAT...TGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR TCA 90 bp | TTCAAAATCAGTCTGAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAATTTGCAGGGATCTTTaGGGTCTCCACATATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FKISLNFLVSLFRMVQQTICRDL*GLHISS Trigger: AGAAGATATGTGGAGACCTCAAAGATCCCTGCAAAT...TGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTCAGACTGATTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CCA 90 bp | GAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCATGTCTTTATTTCGGATaGTGCAGCAGACAACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: EFSCVFISDGAADNFMSSCLYFG*CSRQLH Trigger: ATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACA...TGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CAA 90 bp | GAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCAAGAAGAAATCCCAGCTaGGCAGACTTCATGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: EFSCVFISDGAADNFMSSRRNPS*ADFMVQ Trigger: CTGCACCATGAAGTCTGCCAAGCTGGGATTTCTTCT...TGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CAA 90 bp | TCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCACATCCTTTGAAGTTGTTAAGGTaGCCATTACAGCCGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SCVFISDGAADNFMSSHPLKLLR*PLQPEK Trigger: CTTCTCCGGCTGTAATGGCAACCTTAACAACTTCAA...AGGATGTGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS TCA 90 bp | AATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATaGGTTCACATCCTCTCACCTCGGTGGTTTGTATTTTGCAACACA | + |
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Preference number: 5 (lower is better) Translates to: NFLVSLFRMVQQTTS*VHILSPRWFVFCNT Trigger: TGTGTTGCAAAATACAAACCACCGAGGTGAGAGGATGTGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CAA 90 bp | CAGTCTGAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAATTTGCAGGGATCTTaGAGGTCTCCACATATCTTC | + |
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Preference number: 5 (lower is better) Translates to: QSEFSCVFISDGAADNFMNLQGS*RSPHIF Trigger: GAAGATATGTGGAGACCTCAAAGATCCCTGCAAATT...CATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTCAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CAA 90 bp | TTCAAAATCAGTCTGAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACATCTCACCTCGGTGGTTaGTATTTTGCAACACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: FKISLNFLVSLFRMVQQTSHLGG*YFATQA Trigger: AGCCTGTGTTGCAAAATACAAACCACCGAGGTGAGA...TGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTCAGACTGATTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS-3UTR CAA 90 bp | GAATTTTCTTGTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATGAGTTCAAAATTCATGTCCAATTaGCAGGGATCTTTGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: EFSCVFISDGAADNFMSSKFMSN*QGSLRS Trigger: AGACCTCAAAGATCCCTGCAAATTGGACATGAATTT...TGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACACAAGAAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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| CDS TCA 72 bp | GTGTCTTTATTTCGGATGGTGCAGCAGACAACTTCATaGGTTCACATCCTCTCACCTCGGTGGTTTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: VSLFRMVQQTTS*VHILSPRWFVF Trigger: AAATACAAACCACCGAGGTGAGAGGATGTGAACTCATGAAGTTGTCTGCTGCACCATCCGAAATAAAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279058.4 |
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