RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPINT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166145

Ensembl transcript IDs: ENST00000344051.8, ENST00000562057.5, ENST00000562057.6, ENST00000563135.5, ENST00000563656.5, ENST00000564375.5, ENST00000566642.1, ENST00000566928.5, ENST00000568580.5, ENST00000568823.5, ENST00000569589.1

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTaGGGGCTGCGGAATGCAGCTGAGCTTCTCCTGGCTCTGTCTGCT +
Preference number: 1 (lower is better)
Translates to: YPVGGLGCDVGEPWG*GLRNAAELLLALSA
Trigger: AGCAGACAGAGCCAGGAGAAGCTCAGCTGCATTCCGCAGCCCCCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR GCA 90 bp CTTGTGGAGAGGCTCACACCAGGAAGAAATGCTACACAGCAGCACTaGAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTC +
Preference number: 1 (lower is better)
Translates to: LVERLTPGRNATQQH*SLPTLVAPVARSLL
Trigger: GAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTGCTGTGTAGCATTTCTTCCTGGTGTGAGCCTCTCCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 90 bp ATGCAGGGGTGTGGGTTGGAGTGGCGTGTCTCTACTAAAGGCTCCTaGGAAGGAGCTCAGAGCCTGGTTGGGGGTGCTGCACTCCAGCGC +
Preference number: 1 (lower is better)
Translates to: MQGCGLEWRVSTKGS*EGAQSLVGGAALQR
Trigger: GCGCTGGAGTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGACACGCCACTCCAACCCACACCCCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 90 bp CTCTTTACAGCACAAACTACACAGGGAAGTCCTTCCTCCCAGCCCTaGGCGCACAGCATGGAAGAGGAGCTCGGGAGGACAGGGTTGGGG +
Preference number: 1 (lower is better)
Translates to: LFTAQTTQGSPSSQP*AHSMEEELGRTGLG
Trigger: CCCCAACCCTGTCCTCCCGAGCTCCTCTTCCATGCTGTGCGCCCAGGGCTGGGAGGAAGGACTTCCCTGTGTAGTTTGTGCTGTAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR CCA 90 bp AGTGGCGTGTCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGAGCCTaGTTGGGGGTGCTGCACTCCAGCGCAGAAGCCAGGGCTTCTGTT +
Preference number: 1 (lower is better)
Translates to: SGVSLLKAPGKELRA*LGVLHSSAEARASV
Trigger: AACAGAAGCCCTGGCTTCTGCGCTGGAGTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGACACGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 90 bp TCTCCAAGAGGGGCTGGAGCCCTGGTCTCTGAGGCACAGTGGGCCTaGGAAACAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAG +
Preference number: 1 (lower is better)
Translates to: SPRGAGALVSEAQWA*ETGKSLVPKFFPAQ
Trigger: CTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTGTTTCCCAGGCCCACTGTGCCTCAGAGACCAGGGCTCCAGCCCCTCTTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR CCA 90 bp CAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAACAGGGTaGCTGAAGCCTGAACCAGCTGAACAGGACGGTCCCATCACCCCC +
Preference number: 1 (lower is better)
Translates to: QASFERDDGKTCSTG*LKPEPAEQDGPITP
Trigger: GGGGGTGATGGGACCGTCCTGTTCAGCTGGTTCAGGCTTCAGCCACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR GCA 90 bp AAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTaGTCAACAGGGTGGCTGAAGCCTGAACCAGCTGAACAGGACGGT +
Preference number: 1 (lower is better)
Translates to: KVRGQASFERDDGKT*STGWLKPEPAEQDG
Trigger: ACCGTCCTGTTCAGCTGGTTCAGGCTTCAGCCACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR TCA 90 bp GGTAGGAGCCAAGGTGCCTGTGCACCCCTAACCCCAACCTCCAAATaGGCAGAATTGTGGAGAGCTCAACCACTCAACAGGCTTGTGGAG +
Preference number: 1 (lower is better)
Translates to: GRSQGACAPLTPTSK*AELWRAQPLNRLVE
Trigger: CTCCACAAGCCTGTTGAGTGGTTGAGCTCTCCACAATTCTGCTCATTTGGAGGTTGGGGTTAGGGGTGCACAGGCACCTTGGCTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 90 bp TTTTTGGCACCGGGAGGTAGCTTGAACAAATGCAGGGGTGTGGGTTaGAGTGGCGTGTCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGA +
Preference number: 1 (lower is better)
Translates to: FLAPGGSLNKCRGVG*SGVSLLKAPGKELR
Trigger: TCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGACACGCCACTCCAACCCACACCCCTGCATTTGTTCAAGCTACCTCCCGGTGCCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 90 bp CCAAATGAGCAGAATTGTGGAGAGCTCAACCACTCAACAGGCTTGTaGAGAGGCTCACACCAGGAAGAAATGCTACACAGCAGCACTGCA +
Preference number: 1 (lower is better)
Translates to: PNEQNCGELNHSTGL*RGSHQEEMLHSSTA
Trigger: TGCAGTGCTGCTGTGTAGCATTTCTTCCTGGTGTGAGCCTCTCCACAAGCCTGTTGAGTGGTTGAGCTCTCCACAATTCTGCTCATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR GCA 90 bp GCTTTGAACAGAGGAAACAAAACTCCAACTTCCTCCAAACTCCTATaGAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTT +
Preference number: 1 (lower is better)
Translates to: ALNRGNKTPTSSKLL*RQVHLVWYFWPKGF
Trigger: AAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTTTTGTTTCCTCTGTTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR TCA 90 bp CAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCCCCTGGAGCCCTGGTCTCTaGGGCACAGTGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: QHCSLPTLVAPVARSLLPWSPGL*GTVGLG
Trigger: TCCCAGGCCCACTGTGCCTCAGAGACCAGGGCTCCA...GGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR-3UTR CCA 90 bp CCAGCCCTGGGCGCACAGCATGGAAGAGGAGCTCGGGAGGACAGGGTTGGGGCCGAGGCACAGTGGGCCTaGGAAACAGGCAAGAGTCTG +
Preference number: 2 (lower is better)
Translates to: PALGAQHGRGAREDRVGAEAQWA*ETGKSL
Trigger: CAGACTCTTGCCTGTTTCCCAGGCCCACTGTGCCTC...GGCCCCAACCCTGTCCTCCCGAGCTCCTCTTCCATGCTGTGCGCCCAGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp CCAGCCCTGGGCGCACAGCATGGAAGAGGAGCTCGGGAGGACAGGGTTGGGGCCCAGGTCCATCTAGTCTaGTACTTCTGGCCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: PALGAQHGRGAREDRVGAQVHLV*YFWPKG
Trigger: ACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTG...GGCCCCAACCCTGTCCTCCCGAGCTCCTCTTCCATGCTGTGCGCCCAGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp GTTGGGAGGGAGACAGCTAGTCACCTGGGCCCTAACATGGAGGTAGGAGCCAAGCCTGGGCGCACAGCATaGAAGAGGAGCTCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: VGRETASHLGPNMEVGAKPGRTA*KRSSGG
Trigger: TCCTCCCGAGCTCCTCTTCCATGCTGTGCGCCCAGG...CTTGGCTCCTACCTCCATGTTAGGGCCCAGGTGACTAGCTGTCTCCCTCCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGCCTGGCTCTGTCTGCTaGTCTAGGCCAGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWPGSVC*SRPGWG
Trigger: GCCCCACCCTGGCCTAGACCAGCAGACAGAGCCAGG...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR TCA 90 bp CAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCTGGAGCCCTGGTCTCTaGGGCACAGTGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: QAGPSSLVLLAQGFSAPSWSPGL*GTVGLG
Trigger: TCCCAGGCCCACTGTGCCTCAGAGACCAGGGCTCCA...GGAAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp CAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCCCCAAACAGGCAAGAGTCTaGTTCCAAAGTTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: QHCSLPTLVAPVARSLLPKQARV*FQSFSQ
Trigger: CTGGGAAAAACTTTGGAACCAGACTCTTGCCTGTTT...GGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGCCTGGGCGCACAGCATaGAAGAGGAGCTCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWPGRTA*KRSSGG
Trigger: TCCTCCCGAGCTCCTCTTCCATGCTGTGCGCCCAGG...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR TCA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCGGACGTGAGCTTAGCTaGGACTTCTCCAAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGGRELS*DFSKRG
Trigger: GCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCC...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR-3UTR CCA 90 bp TGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTGAGGGGCTGGAGCCCTaGTCTCTGAGGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: CRQVHLVWYFWPKGFLLLEGLEP*SLRHSG
Trigger: CCCACTGTGCCTCAGAGACCAGGGCTCCAGCCCCTC...AAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGGAGGGGCTGGAGCCCTaGTCTCTGAGGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLREGLEP*SLRHSG
Trigger: CCCACTGTGCCTCAGAGACCAGGGCTCCAGCCCCTC...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCCTAGTCTGGTACTTCTaGCCCAAGGGTTTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGLVWYF*PKGFLL
Trigger: GAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAG...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR-3UTR CCA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGCAGGTCCATCTAGTCTaGTACTTCTGGCCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: RVGLIKGRELNLGGRGREQVHLV*YFWPKG
Trigger: ACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTG...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR TCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGCTCCTTCCAAACCTTTaGGCTTTCTCAGGACGTGAG +
Preference number: 2 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWLLPNL*AFSGRE
Trigger: CTCACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAG...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR GCA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGGGCCCAAGGGTTTTCTaGTCCTTCCAAACCTTTGAG +
Preference number: 2 (lower is better)
Translates to: RVGLIKGRELNLGGRGREGPRVF*SFQTFE
Trigger: CTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCC...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp TCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACGTGGAGGCACAGTGGGCCTaGGAAACAGGCAAGAGTCTG +
Preference number: 2 (lower is better)
Translates to: SGPRVFCSFQTFELSQDVEAQWA*ETGKSL
Trigger: CAGACTCTTGCCTGTTTCCCAGGCCCACTGTGCCTC...CACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp TTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGTCTCTGAGGCACAGTaGGCCTGGGAAACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: FLQTPMQAGPSSLVLLAQVSEAQ*AWETGK
Trigger: CTTGCCTGTTTCCCAGGCCCACTGTGCCTCAGAGAC...TTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGCAGAGAGCTCAATCTTaGGGGAAGAGGAAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWQRAQS*GKRKRG
Trigger: TCCTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTG...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR CAA 90 bp CCTCCAAATGAGCAGAATTGTGGAGAGCTCAACCACTCAACAGGCTaGTGGAGAGGCTCACACCAGGAAGAAATGCTACACAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: PPNEQNCGELNHSTG*WRGSHQEEMLHSST
Trigger: AGTGCTGCTGTGTAGCATTTCTTCCTGGTGTGAGCCTCTCCACAAGCCTGTTGAGTGGTTGAGCTCTCCACAATTCTGCTCATTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR-3UTR CCA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGAAACAGGCAAGAGTCTaGTTCCAAAGTTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: RVGLIKGRELNLGGRGREKQARV*FQSFSQ
Trigger: CTGGGAAAAACTTTGGAACCAGACTCTTGCCTGTTT...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR CCA 72 bp GGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTaGGGGCTGCGGAATGCAGCTGAGCTTCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GGLGCDVGEPWG*GLRNAAELLLA
Trigger: AGCCAGGAGAAGCTCAGCTGCATTCCGCAGCCCCCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CAA 90 bp TCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGAGCCTGGTTGGGGGTGCTGCACGCCCAGGCCTCTGCCTaGGCAAGCAGGAAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: SLLKAPGKELRAWLGVLHAQASA*ASRKQG
Trigger: GCCCTGCTTCCTGCTTGCCAAGGCAGAGGCCTGGGC...GTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR-3UTR CAA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCGGCTGGGCTGTGATGTaGGAGAACCTTGGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGGWAVM*ENLGGG
Trigger: CCCACCCCCAAGGTTCTCCAACATCACAGCCCAGCC...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 72 bp CTGAGGCACAGTGGGCCTGGGAAACAGGCAAGAGTCTaGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: LRHSGPGKQARV*FQSFSQPRPLP
Trigger: AGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTGTTTCCCAGGCCCACTGTGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR-3UTR CAA 90 bp AAAACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACGCCCAGGCCTCTGCCTaGGCAAGCAGGAAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: KTPTSSKLLCRQVHLVWYAQASA*ASRKQG
Trigger: GCCCTGCTTCCTGCTTGCCAAGGCAGAGGCCTGGGC...GTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.5
3UTR TCA 72 bp AGAGAGACGATGGGAAAACCTGCTCAACAGGGTGGCTaGAGCCTGAACCAGCTGAACAGGACGGTCCCATCA +
Preference number: 3 (lower is better)
Translates to: RETMGKPAQQGG*SLNQLNRTVPS
Trigger: TGATGGGACCGTCCTGTTCAGCTGGTTCAGGCTTCAGCCACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 72 bp GAGCCAGAAACTCCACAAACCACTTTTATTACCCAGTaGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGG +
Preference number: 3 (lower is better)
Translates to: EPETPQTTFITQ*AGWAVMLENLG
Trigger: CCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAAGTGGTTTGTGGAGTTTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CCA 72 bp CAGAATTGTGGAGAGCTCAACCACTCAACAGGCTTGTaGAGAGGCTCACACCAGGAAGAAATGCTACACAGC +
Preference number: 3 (lower is better)
Translates to: QNCGELNHSTGL*RGSHQEEMLHS
Trigger: GCTGTGTAGCATTTCTTCCTGGTGTGAGCCTCTCCACAAGCCTGTTGAGTGGTTGAGCTCTCCACAATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCCCCCGGCTTCCGACCCGGTaGTCGGAGAGCTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QHCSLPTLVAPVARSLLPRLPTR*SESWGS
Trigger: CGAGCCCCAGCTCTCCGAGCACCGGGTCGGAAGCCG...GGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCCCCCTTCAAGTCTATGCCTaGCCAGGCCTTGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: QHCSLPTLVAPVARSLLPLQVYA*PGLGDP
Trigger: GGGATCCCCAAGGCCTGGGCAGGCATAGACTTGAAG...GGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp CAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCCCCACCCCAACCTCCAAATaGGCAGAATTGTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QHCSLPTLVAPVARSLLPTPTSK*AELWRA
Trigger: AGCTCTCCACAATTCTGCTCATTTGGAGGTTGGGGT...GGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp ACAGCAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTGTACCTTCAAGTCTATaGCTGCCCAGGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TAALQPPHTRGSRGPLTPVPSSL*LPRPWG
Trigger: TCCCCAAGGCCTGGGCAGGCATAGACTTGAAGGTAC...AGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp ACAGCAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTGGTCAAACATGGCACTaGTCTCCAAAGTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TAALQPPHTRGSRGPLTPGQTWH*SPKSGA
Trigger: GGCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACC...AGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGCGGTGCTCGGAGAGCTaGGGCTCGGCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWRCSES*GSAAFS
Trigger: GGAGAAGGCGGCCGAGCCCCAGCTCTCCGAGCACCG...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCCACTCGTGGCTCCCGTaGCCCGCTCACTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGHSWLP*PAHSSP
Trigger: AGGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTG...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTCCTGCGCAGGTGAGTTaGGTGGGGCCGGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SKLLCRQVHLVWYFWPKGPAQVS*VGPGPP
Trigger: CGGCGGACCCGGCCCCACCCAACTCACCTGCGCAGG...ACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAGCCTCCCCACACTCGTaGCTCCCGTGGCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SKVRGQASFERDDGKTCSASPHS*LPWPAH
Trigger: GTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGC...TGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
3UTR CAA 72 bp GGGTGCTGCACTCCAGCGCAGAAGCCAGGGCTTCTGTaGGGAGGGAGACAGCTAGTCACCTGGGCCCTAACA +
Preference number: 4 (lower is better)
Translates to: GCCTPAQKPGLL*GGRQLVTWALT
Trigger: TGTTAGGGCCCAGGTGACTAGCTGTCTCCCTCCCAACAGAAGCCCTGGCTTCTGCGCTGGAGTGCAGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGACCGGTCCCAGCTTCCTaGGCGGCTCGGGTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGPVPAS*AARVAA
Trigger: AGCCGCGACCCGAGCCGCGCAGGAAGCTGGGACCGG...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CCAGCCCTGGGCGCACAGCATGGAAGAGGAGCTCGGGAGGACAGGGTTGGGGCCTTTCGAGAGAGACGATaGGAAAACCTGCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: PALGAQHGRGAREDRVGAFRERR*ENLLNR
Trigger: CCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAA...GGCCCCAACCCTGTCCTCCCGAGCTCCTCTTCCATGCTGTGCGCCCAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp CAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCTTGGCAAGGGCGGGCTGGGCTGTaGTGTTGGAGAACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QARVWFQSFSQPRPLPWQGRAGL*CWRTLG
Trigger: CCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCC...TTGCCAAGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp GTTGGGAGGGAGACAGCTAGTCACCTGGGCCCTAACATGGAGGTAGGAGCCAAGCCTGAGCCCCAGAGCTaGCTCTCAAAGGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: VGRETASHLGPNMEVGAKPEPQS*LSKAHL
Trigger: AAGGTGGGCCTTTGAGAGGCAGCTCTGGGGCTCAGG...CTTGGCTCCTACCTCCATGTTAGGGCCCAGGTGACTAGCTGTCTCCCTCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTCAGAGCGCGGGCCTCTaGGTTCCGAGGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SKLLCRQVHLVWYFWPKGQSAGL*VPRVLV
Trigger: CACCAGCACCCTCGGAACCCAGAGGCCCGCGCTCTG...ACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGAGTTGCAGTTCTGGGTaGTGCAGCAGGCGCGCACGC +
Preference number: 4 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWSCSSG*CSRRAR
Trigger: GCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACT...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGGCCAAGTTGCAGTTCTaGGTGGTGCAGCAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWAKLQF*VVQQAR
Trigger: GCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGC...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGAGCCTGGTTGGGGGTGCTGCACGTCATAGTACCAGCGTaGGAAAGAGCCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLLKAPGKELRAWLGVLHVIVPA*ERAPAA
Trigger: CGCTGCCGGGGCTCTTTCCCACGCTGGTACTATGAC...GTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAACAGGGTGATGGCGCCTTTCCATaGAGGGGCCCTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SGARPVSRETMGKPAQQGDGAFP*RGPGGK
Trigger: CTTTCCCCCAGGGCCCCTCCATGGAAAGGCGCCATC...ACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp ACAGCAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCAAACACATCCTTCTTaGAGATGCCGCGACAAGACT +
Preference number: 4 (lower is better)
Translates to: TAALQPPHTRGSRGPLTPQTHPS*RCRDKT
Trigger: AGTCTTGTCGCGGCATCTCCAAGAAGGATGTGTTTG...AGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGGTGGGTGGTGGGTGGTaGTGGTGTCCGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RVGLIKGRELNLGGRGREVGGGW*WCPWKS
Trigger: GGACTTCCACGGACACCACCACCACCCACCACCCAC...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp TCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAACAGGGTGGGCGCAGTGTTCGCTaGAGGGGTTGTAGTACCAGC +
Preference number: 4 (lower is better)
Translates to: SGARPVSRETMGKPAQQGGRSVR*RGCSTS
Trigger: GCTGGTACTACAACCCCTTCAGCGAACACTGCGCCC...ACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp TCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTGGAGCCCTGGTCTCTaGGGCACAGTGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKLLCRQVHLVWYFWPKGWSPGL*GTVGLG
Trigger: TCCCAGGCCCACTGTGCCTCAGAGACCAGGGCTCCA...ACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCTTGGCAACCTGGAGGCCGAGCGTaGACAGAAGCCACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: QARVWFQSFSQPRPLPWQPGGRA*TEATRR
Trigger: TCGCCTTGTGGCTTCTGTGCACGCTCGGCCTCCAGG...TTGCCAAGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp GAACAAATGCAGGGGTGTGGGTTGGAGTGGCGTGTCTCTACTAAAGGCTCCTGGTGCAGTTCTGGGTGGTaGAGCAGGCGCGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: EQMQGCGLEWRVSTKGSWCSSGW*SRRARS
Trigger: ACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCA...CCAGGAGCCTTTAGTAGAGACACGCCACTCCAACCCACACCCCTGCATTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGAGCCTGGTTGGGGGTGCTGCACCCACTAGCGCCAAGTTaGAGTTCTGGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLKAPGKELRAWLGVLHPLAPS*SSGWCS
Trigger: GCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGG...GTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCTTGGCAAGGGTGGGCTGACAGGTaGCAGAGCACACTGGATGGC +
Preference number: 4 (lower is better)
Translates to: QARVWFQSFSQPRPLPWQGWADR*QSTLDG
Trigger: GCCATCCAGTGTGCTCTGGCACCTGTCAGCCCACCC...TTGCCAAGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp GTTGGGAGGGAGACAGCTAGTCACCTGGGCCCTAACATGGAGGTAGGAGCCAAGAGTACCAGCGCGGGATaGTCTCCTTGCAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VGRETASHLGPNMEVGAKSTSAG*SPCRVL
Trigger: CAGGACTCTGCAAGGAGAGCATCCCGCGCTGGTACT...CTTGGCTCCTACCTCCATGTTAGGGCCCAGGTGACTAGCTGTCTCCCTCCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCCCTGGTTGGGGGTGCTaGACTCCAGCGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QAGPSSLVLLAQGFSAPSPGWGC*TPAQKP
Trigger: TGGCTTCTGCGCTGGAGTGCAGCACCCCCAACCAGG...GGAAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTGGAAGCAGGCGGCGATaGCGTCCTCCCCGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: NSNFLQTPMQAGPSSLVLGSRRR*RPPRGR
Trigger: CCGACCGCGGGGAGGACGCCATCGCCGCCTGCTTCC...AAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAAAGGCGTCGGGGCAGTTaGGGGTGTCGTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: PKSGARPVSRETMGKPAQRRRGS*GCRHTP
Trigger: TGGAGTGTGACGACACCCCCAACTGCCCCGACGCCT...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGGTCCTCTGGGTGGTCTaGGCTAGTCACTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVGLIKGRELNLGGRGREVLWVV*ASHCQL
Trigger: CAGCTGACAGTGACTAGCTCAGACCACCCAGAGGAC...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TCCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAGCTACACAGCAGCACTaGAGCCTCCCCACACTCGTG +
Preference number: 4 (lower is better)
Translates to: SKVRGQASFERDDGKTCSATQQH*SLPTLV
Trigger: CACGAGTGTGGGGAGGCTGCAGTGCTGCTGTGTAGC...TGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAAGAGCCAAGGTGCCTGTaGACCCCTAACCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: PKSGARPVSRETMGKPAQEPRCL*TPNPNL
Trigger: GAGGTTGGGGTTAGGGGTGCACAGGCACCTTGGCTC...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAACAGGGTGGTGCCAGAGCACACTaGATGGCGCCTTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SGARPVSRETMGKPAQQGGARAH*MAPFHG
Trigger: TCCATGGAAAGGCGCCATCCAGTGTGCTCTGGCACC...ACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTGCAGAGTCCTGTGTCTaGCAGGTCCACGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SKLLCRQVHLVWYFWPKGAESCV*QVHAVP
Trigger: GGGCACTGCGTGGACCTGCCAGACACAGGACTCTGC...ACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCCCACAGAGCCTGTGCTaGGAATGGGGATTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: QAGPSSLVLLAQGFSAPSPQSLC*EWGFPA
Trigger: GGCGGGAAATCCCCATTCCCAGCACAGGCTCTGTGG...GGAAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAACAGGGTGAGGCACAGTGGGCCTaGGAAACAGGCAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SGARPVSRETMGKPAQQGEAQWA*ETGKSL
Trigger: CAGACTCTTGCCTGTTTCCCAGGCCCACTGTGCCTC...ACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACGTGGAGGGGCTGGAGCCCTaGTCTCTGAGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SGPRVFCSFQTFELSQDVEGLEP*SLRHSG
Trigger: CCCACTGTGCCTCAGAGACCAGGGCTCCAGCCCCTC...CACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGGATGTTGGAGAACCTTaGGGGTGGGGGCTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWDVGEP*GWGLRN
Trigger: ATTCCGCAGCCCCCACCCCCAAGGTTCTCCAACATC...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAAACCCAGTGGGCGGGCTaGGCTGTGATGTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PKSGARPVSRETMGKPAQTQWAG*AVMLEN
Trigger: GTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGT...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAGGAGCTCAGAGCCTaGTTGGGGGTGCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: QAGPSSLVLLAQGFSAPSKELRA*LGVLHS
Trigger: GGAGTGCAGCACCCCCAACCAGGCTCTGAGCTCCTT...GGAAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GTTGGGAGGGAGACAGCTAGTCACCTGGGCCCTAACATGGAGGTAGGAGCCAAGTGCAGGGGTGTGGGTTaGAGTGGCGTGTCTCTACTA +
Preference number: 4 (lower is better)
Translates to: VGRETASHLGPNMEVGAKCRGVG*SGVSLL
Trigger: TAGTAGAGACACGCCACTCCAACCCACACCCCTGCA...CTTGGCTCCTACCTCCATGTTAGGGCCCAGGTGACTAGCTGTCTCCCTCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGACGGAACTGGGTGGGCTaGCAGGTGCCAGAGCACACT +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGRNWVG*QVPEHT
Trigger: AGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCG...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAAGGACGTGAGCTTAGCTaGGACTTCTCCAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PKSGARPVSRETMGKPAQGRELS*DFSKRG
Trigger: GCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCC...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp CAAACCTTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGGGGCCTCCAGGGTCTaGCACCACCCCACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QTFELSQDVSLAETSPRGGASRV*HHPTPL
Trigger: AAGAGGAGTGGGGTGGTGTCAGACCCTGGAGGCCCC...CCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAAGGTTTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp CAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCTTGGCAACACCGGGAGGTAGCTTaGACAAATGCAGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QARVWFQSFSQPRPLPWQHREVA*TNAGVW
Trigger: CCACACCCCTGCATTTGTTCAAGCTACCTCCCGGTG...TTGCCAAGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp AACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTTCCCCGCGGTCGGGCTaGAGCTCCACTAGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: NSNFLQTPMQAGPSSLVLSPRSG*SSTSAK
Trigger: CTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGGA...AAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TCCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCACTCAAAGGCCCACCTTaGACACCCCGACAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SKVRGQASFERDDGKTCSLKGPP*TPRQAR
Trigger: TCTAGCCTGTCGGGGTGTGCAAGGTGGGCCTTTGAG...TGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTTGCAGCAGCCATTGCTaGAGCGGAACTGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CRQVHLVWYFWPKGFLLLCSSHC*SGTGWA
Trigger: AGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCA...AAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGTCTCCACAGAGCCTGTaGTGGGAATGGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: RVGLIKGRELNLGGRGRESPQSL*WEWGFP
Trigger: GGGAAATCCCCATTCCCAGCACAGGCTCTGTGGAGA...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGAGAGCCTGGTTGGGGGTaGTGCACTCCAGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGEPGWG*CTPAQK
Trigger: CTTCTGCGCTGGAGTGCAGCACCCCCAACCAGGCTC...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGAGCCTGGTTGGGGGTGCTGCACAGCGACCCACCTTGTTaGATGCGAGGCAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLLKAPGKELRAWLGVLHSDPPC*MRGSSL
Trigger: AAGACTACTGCCTCGCATCCAACAAGGTGGGTCGCT...GTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGATGGAGACAGTGGAGCTaGCAGGGGTGGGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGWRQWS*QGWVVG
Trigger: ACCCACCACCCACCCCTGCCAGCTCCACTGTCTCCA...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCTTGGCAACTCAGAGGGGCCGCGTaGTGTGGTTATAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: QARVWFQSFSQPRPLPWQLRGAA*CGYRPG
Trigger: ACCTGGTCTATAACCACACCACGCGGCCCCTCTGAG...TTGCCAAGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGACCTTCCTCCCAGCCCTaGGCGCACAGCATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGPSSQP*AHSMEE
Trigger: CTCTTCCATGCTGTGCGCCCAGGGCTGGGAGGAAGG...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGAGGAGAACCTTGGGGGTaGGGGCTGCGGAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGGEPWG*GLRNAA
Trigger: AGCTGCATTCCGCAGCCCCCACCCCCAAGGTTCTCC...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTTATTACCCAGTGGGCGGGCTGGGCTGTGATGTTGGAGAACCTTGGGGGTGGGGGTGTGGGTTGGAGTaGCGTGTCTCTACTAAAGGC +
Preference number: 4 (lower is better)
Translates to: FYYPVGGLGCDVGEPWGWGCGLE*RVSTKG
Trigger: GCCTTTAGTAGAGACACGCCACTCCAACCCACACCC...CCACCCCCAAGGTTCTCCAACATCACAGCCCAGCCCGCCCACTGGGTAATAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp GTTGGGAGGGAGACAGCTAGTCACCTGGGCCCTAACATGGAGGTAGGAGCCAAGCTCCTTCCAAACCTTTaGGCTTTCTCAGGACGTGAG +
Preference number: 4 (lower is better)
Translates to: VGRETASHLGPNMEVGAKLLPNL*AFSGRE
Trigger: CTCACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAG...CTTGGCTCCTACCTCCATGTTAGGGCCCAGGTGACTAGCTGTCTCCCTCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp GAACAAATGCAGGGGTGTGGGTTGGAGTGGCGTGTCTCTACTAAAGGCTCCTGGCATCCTTCTTGGAGATaGCGCGACAAGACTCGAGGC +
Preference number: 4 (lower is better)
Translates to: EQMQGCGLEWRVSTKGSWHPSWR*RDKTRG
Trigger: GCCTCGAGTCTTGTCGCGGCATCTCCAAGAAGGATG...CCAGGAGCCTTTAGTAGAGACACGCCACTCCAACCCACACCCCTGCATTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCTCCTCCAAACTCCTATaGAGGCAGGTCCATCTAGTC +
Preference number: 4 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGSSKLL*RQVHLV
Trigger: GACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGA...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GTTGGGAGGGAGACAGCTAGTCACCTGGGCCCTAACATGGAGGTAGGAGCCAAGCAGTTCCACCTGGTTTaGGTCTTTCCTCTCTACCCT +
Preference number: 4 (lower is better)
Translates to: VGRETASHLGPNMEVGAKQFHLV*VFPLYP
Trigger: AGGGTAGAGAGGAAAGACCCAAACCAGGTGGAACTG...CTTGGCTCCTACCTCCATGTTAGGGCCCAGGTGACTAGCTGTCTCCCTCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAACCAGAGCACACTGGATaGCGCCTTTCCATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FLQTPMQAGPSSLVLLAQPEHTG*RLSMEG
Trigger: CCCCTCCATGGAAAGGCGCCATCCAGTGTGCTCTGG...TTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAAGGGAAATGGATGCGCTaGAGCTCGTCAAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: PKSGARPVSRETMGKPAQGKWMR*SSSKPL
Trigger: GAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCC...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GAACAAATGCAGGGGTGTGGGTTGGAGTGGCGTGTCTCTACTAAAGGCTCCTGGACCTGCTCAACAGGGTaGCTGAAGCCTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: EQMQGCGLEWRVSTKGSWTCSTG*LKPEPA
Trigger: AGCTGGTTCAGGCTTCAGCCACCCTGTTGAGCAGGT...CCAGGAGCCTTTAGTAGAGACACGCCACTCCAACCCACACCCCTGCATTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGACTTTCCTCTCTACCCTaGCATCCGTGTCACCCCGCA +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGLSSLP*HPCHPA
Trigger: TGCGGGGTGACACGGATGTCAGGGTAGAGAGGAAAG...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCTTGGCAACCCGACAGGCTAGAATaGACTCTTCTTCCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: QARVWFQSFSQPRPLPWQPDRLE*TLLPEG
Trigger: ACCTTCGGGAAGAAGAGTGCATTCTAGCCTGTCGGG...TTGCCAAGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAACCCCACAGTTCCACCTaGTTTGGGTCTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PKSGARPVSRETMGKPAQPHSST*FGSFLS
Trigger: AGAGAGGAAAGACCCAAACCAGGTGGAACTGTGGGG...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAAAGTGCCCTTTGTCACTaGGGAAATGGATGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PKSGARPVSRETMGKPAQSALCH*GNGCAG
Trigger: TCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACT...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGAGCAGTAACCCAAGATaGCTACCACCACCACAATGC +
Preference number: 4 (lower is better)
Translates to: RVGLIKGRELNLGGRGRESSNPR*LPPPQC
Trigger: GCATTGTGGTGGTGGTAGCCATCTTGGGTTACTGCT...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCTGGTGGTGGTGTCCGTaGAAGTCCTTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QAGPSSLVLLAQGFSAPSWWWCP*KSFLWF
Trigger: GAACCAGAGAAAGGACTTCCACGGACACCACCACCA...GGAAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGAGTCTCTGAGGCACAGTaGGCCTGGGAAACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGVSEAQ*AWETGK
Trigger: CTTGCCTGTTTCCCAGGCCCACTGTGCCTCAGAGAC...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR TCA 90 bp CAAACCTTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTCAACAGGGTGGCTaGAGCCTGAACCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QTFELSQDVSLAETSPRGAQQGG*SLNQLN
Trigger: GTTCAGCTGGTTCAGGCTTCAGCCACCCTGTTGAGC...CCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAAGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGGCGGGATGCTCTCCTTaGAGAGTCCTGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLRAGCSP*RVLCLA
Trigger: TGCCAGACACAGGACTCTGCAAGGAGAGCATCCCGC...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TCCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCACAAGACTCGAGGCACTaGTGCTCTTCCTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SKVRGQASFERDDGKTCSQDSRH*CSSSKL
Trigger: CAACTTTGAGGAAGAGCAGCAGTGCCTCGAGTCTTG...TGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGGCCGTGTCCTCTGGGTaGTCTGAGCTAGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLRAVSSG*SELVTV
Trigger: GACAGTGACTAGCTCAGACCACCCAGAGGACACGGC...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTTTGTCACTGGGGAAATaGATGCGCTGGAGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: CRQVHLVWYFWPKGFLLLLSLGK*MRWSSS
Trigger: TGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAA...AAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTAGCCTGTGCTGGGAATaGGGATTTCCCGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NSNFLQTPMQAGPSSLVLSLCWE*GFPASG
Trigger: GCCTGAGGCGGGAAATCCCCATTCCCAGCACAGGCT...AAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGGGTGGTGGGTGGTGGTaGTGTCCGTGGAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLRGGGWW*CPWKSF
Trigger: AAAGGACTTCCACGGACACCACCACCACCCACCACC...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GAACAAATGCAGGGGTGTGGGTTGGAGTGGCGTGTCTCTACTAAAGGCTCCTGGCAGAGAGCTCAATCTTaGGGGAAGAGGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: EQMQGCGLEWRVSTKGSWQRAQS*GKRKRG
Trigger: TCCTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTG...CCAGGAGCCTTTAGTAGAGACACGCCACTCCAACCCACACCCCTGCATTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGAACTCCTCCCCTCTGGTaGTCAAACATGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGTPPLW*SNMALL
Trigger: GAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGT...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp AACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCCCTGGGCGCGAACTTaGACACGAAGTTCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: NSNFLQTPMQAGPSSLVLPWART*TRSSAR
Trigger: ACGAGCAGAACTTCGTGTGCAAGTTCGCGCCCAGGG...AAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp CAGGCAAGAGTCTGGTTCCAAAGTTTTTCCCAGCCCAGGCCTCTGCCTTGGCAACATAAACGAAACTCTTaGAGATCTGCTCCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QARVWFQSFSQPRPLPWQHKRNS*RSAPWG
Trigger: ACCCCACGGAGCAGATCTGCAAGAGTTTCGTTTATG...TTGCCAAGGCAGAGGCCTGGGCTGGGAAAAACTTTGGAACCAGACTCTTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGAGCCTGGTTGGGGGTGCTGCACCAAAGTTGTTCTTGTTaGCGTAACAACCACCATAGG +
Preference number: 4 (lower is better)
Translates to: SLLKAPGKELRAWLGVLHQSCSC*RNNHHR
Trigger: CCTATGGTGGTTGTTACGGCAACAAGAACAACTTTG...GTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACGTGGATGACCAGGAACACTaGGACAGCCATCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: SGPRVFCSFQTFELSQDVDDQEH*DSHLHR
Trigger: TCTGTGGAGATGGCTGTCGCAGTGTTCCTGGTCATC...CACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTGGCCCAAGGGTTTTCTaGTCCTTCCAAACCTTTGAG +
Preference number: 4 (lower is better)
Translates to: CRQVHLVWYFWPKGFLLLGPRVF*SFQTFE
Trigger: CTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCC...AAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp TCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACGTGGACGATGGGAAAACCTaGTCAACAGGGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGPRVFCSFQTFELSQDVDDGKT*STGWLK
Trigger: CTTCAGCCACCCTGTTGAGCAGGTTTTCCCATCGTC...CACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCAAACAGGCAAGAGTCTaGTTCCAAAGTTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGKQARV*FQSFSQ
Trigger: CTGGGAAAAACTTTGGAACCAGACTCTTGCCTGTTT...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACGTGCAGGTCCATCTAGTCTaGTACTTCTGGCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SGPRVFCSFQTFELSQDVQVHLV*YFWPKG
Trigger: ACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTG...CACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGCTCTTCCTAGCACCATaGGGTAGGGACAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLRLFLAP*GRDRQL
Trigger: AAGCTGCCTGTCCCTACCCCATGGTGCTAGGAAGAG...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCTCTGGTGGTCAAACATaGCACTGCTCTCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QAGPSSLVLLAQGFSAPSSGGQT*HCSPKS
Trigger: TGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGA...GGAAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGATCTACTAAAGGCTCCTaGGAAGGAGCTCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FELSQDVSLAETSPRGAGSTKGS*EGAQSL
Trigger: CAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGA...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACAAATGCAGGGGTGTaGGTTGGAGTGGCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLRTNAGV*VGVACL
Trigger: GAGACACGCCACTCCAACCCACACCCCTGCATTTGT...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AAAACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACGCCGCCTTCTCCCCCTaGTTTCTGGTGAAACTGAGT +
Preference number: 4 (lower is better)
Translates to: KTPTSSKLLCRQVHLVWYAAFSP*FLVKLS
Trigger: ACTCAGTTTCACCAGAAACCAGGGGGAGAAGGCGGC...GTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTTGCAGATCTGCTCCGTaGGGTCATAGTACCAGCGTG +
Preference number: 4 (lower is better)
Translates to: NSNFLQTPMQAGPSSLVLCRSAP*GHSTSV
Trigger: CACGCTGGTACTATGACCCCACGGAGCAGATCTGCA...AAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR GCA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGGGTAGCTTGAACAAATaGAGGGGTGTGGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLRGSLNK*RGVGWS
Trigger: ACTCCAACCCACACCCCTGCATTTGTTCAAGCTACC...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AAAACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACAGCACCAGGGGTTCCTaGGGTTGTACCTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: KTPTSSKLLCRQVHLVWYSTRGS*GCTFKS
Trigger: AGACTTGAAGGTACAACCCCAGGAACCCCTGGTGCT...GTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp CAAACCTTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGCTAGTCTGGTACTTCTaGCCCAAGGGTTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QTFELSQDVSLAETSPRGLVWYF*PKGFLL
Trigger: GAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAG...CCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CCA 90 bp AAAACTCCAACTTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACACTTTTATTACCCAGTaGGCGGGCTGGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: KTPTSSKLLCRQVHLVWYTFITQ*AGWAVM
Trigger: CATCACAGCCCAGCCCGCCCACTGGGTAATAAAAGT...GTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAAGTTGGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS GCA 90 bp GAGTTGGGTGGGGCCGGGTCCGCCGAGGTTCCGGTCCCAGCTTCCTaGGCGGCTCGGGTCGCGGCTTCCGACCCGGTGCTCGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: ELGGAGSAEVPVPAS*AARVAASDPVLGEL
Trigger: CAGCTCTCCGAGCACCGGGTCGGAAGCCGCGACCCGAGCCGCGCAGGAAGCTGGGACCGGAACCTCGGCGGACCCGGCCCCACCCAACTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000568823.5
CDS GCA 90 bp CGGTCCCAGCTTCCTGCGCGGCTCGGGTCGCGGCTTCCGACCCGGTaGTCGGAGAGCTGGGGCTCGGCCGCCTTCTCCCCCTGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: RSQLPARLGSRLPTR*SESWGSAAFSPWFL
Trigger: CAGAAACCAGGGGGAGAAGGCGGCCGAGCCCCAGCTCTCCGAGCACCGGGTCGGAAGCCGCGACCCGAGCCGCGCAGGAAGCTGGGACCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.6
CDS GCA 90 bp ACGAGCGCAGAACAAAGGGCCGGACATGCTCCAGCCCGCTCCGCCTaGGCCTCGGCCTTGCGCGCGGGGGCCCGGGTTACCTGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: TSAEQRAGHAPARSA*ASALRAGARVTCAG
Trigger: ACCTGCGCAGGTAACCCGGGCCCCCGCGCGCAAGGCCGAGGCGCAGGCGGAGCGGGCTGGAGCATGTCCGGCCCTTTGTTCTGCGCTCGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563656.5
CDS GCA 90 bp GGTCGGGCTGCAGCTCCACTAGCGCCAAGTTGCAGTTCTGGGTGGTaGAGCAGGCGCGCACGCAGTCCCAGCCCCGGCGCACGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GRAAAPLAPSCSSGW*SRRARSPSPGARWG
Trigger: CCCCCACCGTGCGCCGGGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CCA 90 bp CGCGGTCGGGCTGCAGCTCCACTAGCGCCAAGTTGCAGTTCTGGGTaGTGCAGCAGGCGCGCACGCAGTCCCAGCCCCGGCGCACGGTGG +
Preference number: 5 (lower is better)
Translates to: RGRAAAPLAPSCSSG*CSRRARSPSPGARW
Trigger: CCACCGTGCGCCGGGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CCA 90 bp TCCCCGCGGTCGGGCTGCAGCTCCACTAGCGCCAAGTTGCAGTTCTaGGTGGTGCAGCAGGCGCGCACGCAGTCCCAGCCCCGGCGCACG +
Preference number: 5 (lower is better)
Translates to: SPRSGCSSTSAKLQF*VVQQARTQSQPRRT
Trigger: CGTGCGCCGGGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS GCA 90 bp TGGCGTCCTCCCCGCGGTCGGGCTGCAGCTCCACTAGCGCCAAGTTaGAGTTCTGGGTGGTGCAGCAGGCGCGCACGCAGTCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: WRPPRGRAAAPLAPS*SSGWCSRRARSPSP
Trigger: GGGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGGAGGACGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CCA 90 bp CCTGCGCGGCTCGGGTCGCGGCTTCCGACCCGGTGCTCGGAGAGCTaGGGCTCGGCCGCCTTCTCCCCCTGGTTTCTGGTGAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: PARLGSRLPTRCSES*GSAAFSPWFLVKLS
Trigger: ACTCAGTTTCACCAGAAACCAGGGGGAGAAGGCGGCCGAGCCCCAGCTCTCCGAGCACCGGGTCGGAAGCCGCGACCCGAGCCGCGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp CAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCCCCACAGTGACTGTGACGTaGGCCGTGTCCTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QHCSLPTLVAPVARSLLPTVTVT*AVSSGW
Trigger: CCACCCAGAGGACACGGCCAACGTCACAGTCACTGT...GGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS GCA 90 bp TTGATGAGGAAGCAGGCGGCGATGGCGTCCTCCCCGCGGTCGGGCTaGAGCTCCACTAGCGCCAAGTTGCAGTTCTGGGTGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LMRKQAAMASSPRSG*SSTSAKLQFWVVQQ
Trigger: CTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGGAGGACGCCATCGCCGCCTGCTTCCTCATCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS-3UTR CAA 90 bp CAGCACTGCAGCCTCCCCACACTCGTGGCTCCCGTGGCCCGCTCACTCCTCCCCTCCACGCAGTGCCCTTaGTCACTGGGGAAATGGATG +
Preference number: 5 (lower is better)
Translates to: QHCSLPTLVAPVARSLLPSTQCP*SLGKWM
Trigger: CATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGA...GGGGAGGAGTGAGCGGGCCACGGGAGCCACGAGTGTGGGGAGGCTGCAGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS CCA 90 bp AGCGGAACTGGGTGGGCTGACAGGTGCCAGAGCACACTGGACGGGTaGAAGGGAGGTCAGGCTCAAGCAAAGAACAAGTGCCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: SGTGWADRCQSTLDG*KGGQAQAKNKCPGP
Trigger: GGGCCCTGGGCACTTGTTCTTTGCTTGAGCCTGACCTCCCTTCCACCCGTCCAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS-3UTR CAA 90 bp CAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCACCTGCGCAGGTGAGTaGGGTGGGGCCGGGTCCGCC +
Preference number: 5 (lower is better)
Translates to: QAGPSSLVLLAQGFSAPSTCAGE*GGAGSA
Trigger: GGCGGACCCGGCCCCACCCAACTCACCTGCGCAGGT...GGAAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS TCA 90 bp AAACTGTCGATGCAGCAGCCATTGCTGCAGCGGAACTGGGTGGGCTaGCAGGTGCCAGAGCACACTGGACGGGTGGAAGGGAGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: KLSMQQPLLQRNWVG*QVPEHTGRVEGRSG
Trigger: GCCTGACCTCCCTTCCACCCGTCCAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS GCA 90 bp GGGTGTCGTCACACTCCAGGAAACTGTCGATGCAGCAGCCATTGCTaGAGCGGAACTGGGTGGGCTGACAGGTGCCAGAGCACACCTGGG +
Preference number: 5 (lower is better)
Translates to: GCRHTPGNCRCSSHC*SGTGWADRCQSTPG
Trigger: CCCAGGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGGAGTGTGACGACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568580.5
CDS CCA 90 bp CCAGGAAACTGTCGATGCAGCAGCCATTGCTGCAGCGGAACTGGGTaGGCTGACAGGTGCCAGAGCACACTGGACGGGTGGAAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: PGNCRCSSHCCSGTG*ADRCQSTLDGWKGG
Trigger: ACCTCCCTTCCACCCGTCCAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS CCA 90 bp CCAGGAAACTGTCGATGCAGCAGCCATTGCTGCAGCGGAACTGGGTaGGCTGACAGGTGCCAGAGCACACCTGGGGGAAAGTCGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PGNCRCSSHCCSGTG*ADRCQSTPGGKSPE
Trigger: CTCAGGCGACTTTCCCCCAGGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568580.5
CDS GCA 90 bp GGGTGTCGTCACACTCCAGGAAACTGTCGATGCAGCAGCCATTGCTaGAGCGGAACTGGGTGGGCTGACAGGTGCCAGAGCACACTGGAC +
Preference number: 5 (lower is better)
Translates to: GCRHTPGNCRCSSHC*SGTGWADRCQSTLD
Trigger: GTCCAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGGAGTGTGACGACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563135.5
ENST00000566642.1
CDS CCA 90 bp CCAGGAAACTGTCGATGCAGCAGCCATTGCTGCAGCGGAACTGGGTaGGCTGACAGGTGCCAGAGCACACTGGATGGCGCCTTTCCATGG +
Preference number: 5 (lower is better)
Translates to: PGNCRCSSHCCSGTG*ADRCQSTLDGAFPW
Trigger: CCATGGAAAGGCGCCATCCAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.6
CDS CCA 90 bp CCAGGAAACTGTCGATGCAGCAGCCATTGCTGCAGCGGAACTGGGTaGGCTGACAGGTGCCAGAGCACACTTGCACACCCCGACAGGCTA +
Preference number: 5 (lower is better)
Translates to: PGNCRCSSHCCSGTG*ADRCQSTLAHPDRL
Trigger: TAGCCTGTCGGGGTGTGCAAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564375.5
CDS-3UTR CAA 90 bp CCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAAGCCCAGGCCTCTGCCTaGGCAAGCAGGAAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PKSGARPVSRETMGKPAQAQASA*ASRKQG
Trigger: GCCCTGCTTCCTGCTTGCCAAGGCAGAGGCCTGGGC...TTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp TCTCTACTAAAGGCTCCTGGGAAGGAGCTCAGAGCCTGGTTGGGGGTGCTGCACGGCTGGGCTGTGATGTaGGAGAACCTTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SLLKAPGKELRAWLGVLHGWAVM*ENLGGG
Trigger: CCCACCCCCAAGGTTCTCCAACATCACAGCCCAGCC...GTGCAGCACCCCCAACCAGGCTCTGAGCTCCTTCCCAGGAGCCTTTAGTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS GCA 90 bp GGGTGTCGTCACACTCCAGGAAACTGTCGATGCAGCAGCCATTGCTaGAGCGGAACTGGGTGGGCTGACAGGTGCCAGAGCACACTGGAT +
Preference number: 5 (lower is better)
Translates to: GCRHTPGNCRCSSHC*SGTGWADRCQSTLD
Trigger: ATCCAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGGAGTGTGACGACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.6
CDS GCA 90 bp ACACTGGACGGGTGGAAGGGAGGTCAGGCTCAAGCAAAGAACAAGTaGCCAGGGCCCACCTTCTACTTGGCCCTCTCTGCCCAGACACAG +
Preference number: 5 (lower is better)
Translates to: TLDGWKGGQAQAKNK*PGPTFYLALSAQTQ
Trigger: CTGTGTCTGGGCAGAGAGGGCCAAGTAGAAGGTGGGCCCTGGGCACTTGTTCTTTGCTTGAGCCTGACCTCCCTTCCACCCGTCCAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS GCA 90 bp GGGTGTCGTCACACTCCAGGAAACTGTCGATGCAGCAGCCATTGCTaGAGCGGAACTGGGTGGGCTGACAGGTGCCAGAGCACACTTGCA +
Preference number: 5 (lower is better)
Translates to: GCRHTPGNCRCSSHC*SGTGWADRCQSTLA
Trigger: TGCAAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGGAGTGTGACGACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564375.5
CDS CCA 90 bp GGCAGGTCCACGCAGTGCCCTTTGTCACTGGGGAAATGGATGCGCTaGAGCTCGTCAAAGCCACTCGTGTCTGGATGGCGCCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: GRSTQCPLSLGKWMR*SSSKPLVSGWRLSM
Trigger: CATGGAAAGGCGCCATCCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566928.5
ENST00000569589.1
CDS GCA 90 bp AGCAAAGAACAAGTGCCCAGGGCCCACCTTCTACTTGGCCCTCTCTaGCCAGACACAGCACATCCCCCATTCCCTTTCCACCAACCCCAC +
Preference number: 5 (lower is better)
Translates to: SKEQVPRAHLLLGPL*PDTAHPPFPFHQPH
Trigger: GTGGGGTTGGTGGAAAGGGAATGGGGGATGTGCTGTGTCTGGGCAGAGAGGGCCAAGTAGAAGGTGGGCCCTGGGCACTTGTTCTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS CCA 90 bp AACGAAACTCTTGCAGATCTGCTCCGTGGGGTCATAGTACCAGCGTaGGAAAGAGCCCCGGCAGCGACCCACCTTGTTGGATGCGAGGCA +
Preference number: 5 (lower is better)
Translates to: NETLADLLRGVIVPA*ERAPAATHLVGCEA
Trigger: TGCCTCGCATCCAACAAGGTGGGTCGCTGCCGGGGCTCTTTCCCACGCTGGTACTATGACCCCACGGAGCAGATCTGCAAGAGTTTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000564375.5
ENST00000566928.5
ENST00000568580.5
CDS CCA 90 bp GGCAGGTCCACGCAGTGCCCTTTGTCACTGGGGAAATGGATGCGCTaGAGCTCGTCAAAGCCACTCGTGTCTGCAGAGAGGAAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: GRSTQCPLSLGKWMR*SSSKPLVSAERKGQ
Trigger: CTGACCTTTCCTCTCTGCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566642.1
CDS-3UTR CAA 90 bp AGGGTGGGGCTGATCAAGGGCAGAGAGCTCAATCTTGGGGGAAGAGGAAGAGAGTCGATGCAGCAGCCATaGCTGCAGCGGAACTGGGTG +
Preference number: 5 (lower is better)
Translates to: RVGLIKGRELNLGGRGRESMQQP*LQRNWV
Trigger: CACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGA...CTCTCTTCCTCTTCCCCCAAGATTGAGCTCTCTGCCCTTGATCAGCCCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp TCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACGTGGAGGCGTCGGGGCAGTaGGGGGTGTCGTCACACTCC +
Preference number: 5 (lower is better)
Translates to: SGPRVFCSFQTFELSQDVEASGQ*GVSSHS
Trigger: GGAGTGTGACGACACCCCCAACTGCCCCGACGCCTC...CACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCAAGCCAGGGCTTCTGTaGGGAGGGAGACAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGKPGLL*GGRQLV
Trigger: GACTAGCTGTCTCCCTCCCAACAGAAGCCCTGGCTT...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS GCA 90 bp GGCGCCTTTCCATGGAGGGGCCTTGCACACCCCGACAGGCTAGAATaGACTCTTCTTCCCGAAGGTAGTTGTTCTTGTTGCCCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GAFPWRGLAHPDRLE*TLLPEGSCSCCPSS
Trigger: GCTGCTTGGGCAACAAGAACAACTACCTTCGGGAAGAAGAGTGCATTCTAGCCTGTCGGGGTGTGCAAGGCCCCTCCATGGAAAGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562057.6
ENST00000566928.5
CDS CCA 90 bp GGCAGGTCCACGCAGTGCCCTTTGTCACTGGGGAAATGGATGCGCTaGAGCTCGTCAAAGCCACTCGTGTATTTTTCACAGGCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: GRSTQCPLSLGKWMR*SSSKPLVYFSQAAS
Trigger: CGAGGCTGCCTGTGAAAAATACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000568580.5
CDS CCA 90 bp GTCAGGCTCAAGCAAAGAACAAGTGCCCAGGGCCCACCTTCTACTTaGCCCTCTCTGCCCAGACACAGCACATCCCCCATTCCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: VRLKQRTSAQGPPST*PSLPRHSTSPIPFP
Trigger: TGGAAAGGGAATGGGGGATGTGCTGTGTCTGGGCAGAGAGGGCCAAGTAGAAGGTGGGCCCTGGGCACTTGTTCTTTGCTTGAGCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS-3UTR CAA 90 bp GAACAAATGCAGGGGTGTGGGTTGGAGTGGCGTGTCTCTACTAAAGGCTCCTGGTTGCTGACCGAGGCGTaGGTGTCCAGCACGAAGCCA +
Preference number: 5 (lower is better)
Translates to: EQMQGCGLEWRVSTKGSWLLTEA*VSSTKP
Trigger: TGGCTTCGTGCTGGACACCAACGCCTCGGTCAGCAA...CCAGGAGCCTTTAGTAGAGACACGCCACTCCAACCCACACCCCTGCATTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp TGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCGCGGGATGCTCTCCTaGCAGAGTCCTGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: CRQVHLVWYFWPKGFLLLRGMLS*QSPVSG
Trigger: GCCAGACACAGGACTCTGCAAGGAGAGCATCCCGCG...AAGGAGCAGAAAACCCTTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp TCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCAACAGGGTATGCAGGGGTGTGGGTaGGAGTGGCGTGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: SGARPVSRETMGKPAQQGMQGCG*EWRVST
Trigger: AGTAGAGACACGCCACTCCAACCCACACCCCTGCAT...ACCCTGTTGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS GCA 90 bp ACTGGGGAAATGGATGCGCTGGAGCTCGTCAAAGCCACTCGTGTCTaGAGAGAGGAAAGGTCAGAGTCTCAGACCCAACAAGGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: TGEMDALELVKATRV*REERSESQTQQGSP
Trigger: GGGAGACCCTTGTTGGGTCTGAGACTCTGACCTTTCCTCTCTGCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566642.1
CDS-3UTR CAA 90 bp CTCACTCCTCCCCTCTGGTGGTCAAACATGGCACTGCTCTCCAAAGTCAGGGGCCCAAACACATCCTTCTaGGAGATGCCGCGACAAGAC +
Preference number: 5 (lower is better)
Translates to: LTPPLWWSNMALLSKVRGPNTSF*EMPRQD
Trigger: GTCTTGTCGCGGCATCTCCAAGAAGGATGTGTTTGG...GCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACCAGAGGGGAGGAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS GCA 90 bp GCTGACAGGTGCCAGAGCACACTTGCACACCCCGACAGGCTAGAATaGACTCTTCTTCCCGAAGGTAGTTGTTCTTGTTGCCCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ADRCQSTLAHPDRLE*TLLPEGSCSCCPSS
Trigger: GCTGCTTGGGCAACAAGAACAACTACCTTCGGGAAGAAGAGTGCATTCTAGCCTGTCGGGGTGTGCAAGTGTGCTCTGGCACCTGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564375.5
CDS-3UTR CAA 90 bp TCCAAAGTCAGGGGCCAGGCCAGTTTCGAGAGAGACGATGGGAAAACCTGCTCACAGGGGTTCCTGGGGTaGTACCTTCAAGTCTATGCC +
Preference number: 5 (lower is better)
Translates to: SKVRGQASFERDDGKTCSQGFLG*YLQVYA
Trigger: GGCATAGACTTGAAGGTACAACCCCAGGAACCCCTG...TGAGCAGGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp CAAACCTTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGAGGAAGGTAGCTCCGTaGCTGACCGAGGCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: QTFELSQDVSLAETSPRGRKVAP*LTEALV
Trigger: CACCAACGCCTCGGTCAGCAACGGAGCTACCTTCCT...CCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAAGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp TCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGACGTGTCCACTAGCGCCAAGTaGCAGTTCTGGGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SGPRVFCSFQTFELSQDVSTSAK*QFWVVQ
Trigger: CTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGA...CACGTCCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp GTACTTCTGGCCCAAGGGTTTTCTGCTCCTTCCAAACCTTTGAGCTTTCTCAGGTCCCTGGGCGCGAACTaGCACACGAAGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VLLAQGFSAPSKPLSFLRSLGAN*HTKFCS
Trigger: CGAGCAGAACTTCGTGTGCAAGTTCGCGCCCAGGGA...CCTGAGAAAGCTCAAAGGTTTGGAAGGAGCAGAAAACCCTTGGGCCAGAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp TTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGGCTGGAGCACCGGGAGGTAGCTaGAACAAATGCAGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: FELSQDVSLAETSPRGAGAPGGS*NKCRGV
Trigger: CACACCCCTGCATTTGTTCAAGCTACCTCCCGGTGC...TCCAGCCCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp TTCCTCCAAACTCCTATGCAGGCAGGTCCATCTAGTCTGGTACTTCTGGCCCAAAACCACTCAACAGGCTaGTGGAGAGGCTCACACCAG +
Preference number: 5 (lower is better)
Translates to: FLQTPMQAGPSSLVLLAQNHSTG*WRGSHQ
Trigger: CTGGTGTGAGCCTCTCCACAAGCCTGTTGAGTGGTT...TTGGGCCAGAAGTACCAGACTAGATGGACCTGCCTGCATAGGAGTTTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS-3UTR CAA 90 bp CAAACCTTTGAGCTTTCTCAGGACGTGAGCTTAGCTGAGACTTCTCCAAGAGGGACAGTTCCACCTGGTTaGGGTCTTTCCTCTCTACCC +
Preference number: 5 (lower is better)
Translates to: QTFELSQDVSLAETSPRGTVPPG*GLSSLP
Trigger: GGGTAGAGAGGAAAGACCCAAACCAGGTGGAACTGT...CCCTCTTGGAGAAGTCTCAGCTAAGCTCACGTCCTGAGAAAGCTCAAAGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344051.8
CDS GCA 72 bp GGGGCCGGGTCCGCCGAGGTTCCGGTCCCAGCTTCCTaGGCGGCTCGGGTCGCGGCTTCCGACCCGGTGCTC +
Preference number: 6 (lower is better)
Translates to: GAGSAEVPVPAS*AARVAASDPVL
Trigger: GAGCACCGGGTCGGAAGCCGCGACCCGAGCCGCGCAGGAAGCTGGGACCGGAACCTCGGCGGACCCGGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000568823.5
CDS GCA 72 bp CTTCCTGCGCGGCTCGGGTCGCGGCTTCCGACCCGGTaGTCGGAGAGCTGGGGCTCGGCCGCCTTCTCCCCC +
Preference number: 6 (lower is better)
Translates to: LPARLGSRLPTR*SESWGSAAFSP
Trigger: GGGGGAGAAGGCGGCCGAGCCCCAGCTCTCCGAGCACCGGGTCGGAAGCCGCGACCCGAGCCGCGCAGGAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.6
CDS GCA 72 bp GCGGTGGCCCGGCCTGGGTGCCCTGGAGGCCGAGCGTaGACAGAAGCCACAAGGCGACGGCAGGGATGCCGG +
Preference number: 6 (lower is better)
Translates to: AVARPGCPGGRA*TEATRRRQGCR
Trigger: CCGGCATCCCTGCCGTCGCCTTGTGGCTTCTGTGCACGCTCGGCCTCCAGGGCACCCAGGCCGGGCCACCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568823.5
CDS CCA 72 bp CTCGGGTCGCGGCTTCCGACCCGGTGCTCGGAGAGCTaGGGCTCGGCCGCCTTCTCCCCCTGGTTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: LGSRLPTRCSES*GSAAFSPWFLV
Trigger: CACCAGAAACCAGGGGGAGAAGGCGGCCGAGCCCCAGCTCTCCGAGCACCGGGTCGGAAGCCGCGACCCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344051.8
ENST00000562057.6
CDS GCA 72 bp GGACACACGCACGAGCGCAGAACAAAGGGCCGGACATaGTCCAGCCCGCTCCGCCTGCGCCTCGGCCTTGCG +
Preference number: 6 (lower is better)
Translates to: GHTHERRTKGRT*SSPLRLRLGLA
Trigger: CGCAAGGCCGAGGCGCAGGCGGAGCGGGCTGGAGCATGTCCGGCCCTTTGTTCTGCGCTCGTGCGTGTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563656.5
CDS CAA 90 bp ATGGCGTCCTCCCCGCGGTCGGGCTGCAGCTCCACTAGCGCCAAGTaGCAGTTCTGGGTGGTGCAGCAGGCGCGCACGCAGTCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: MASSPRSGCSSTSAK*QFWVVQQARTQSQP
Trigger: GGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGGAGGACGCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS GCA 72 bp GCAGCTCCACTAGCGCCAAGTTGCAGTTCTGGGTGGTaGAGCAGGCGCGCACGCAGTCCCAGCCCCGGCGCA +
Preference number: 6 (lower is better)
Translates to: AAPLAPSCSSGW*SRRARSPSPGA
Trigger: TGCGCCGGGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS GCA 72 bp CCCCGCGGTCGGGCTGCAGCTCCACTAGCGCCAAGTTaGAGTTCTGGGTGGTGCAGCAGGCGCGCACGCAGT +
Preference number: 6 (lower is better)
Translates to: PRGRAAAPLAPS*SSGWCSRRARS
Trigger: ACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CCA 72 bp GCTGCAGCTCCACTAGCGCCAAGTTGCAGTTCTGGGTaGTGCAGCAGGCGCGCACGCAGTCCCAGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: AAAPLAPSCSSG*CSRRARSPSPG
Trigger: GCCGGGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CAA 72 bp TCCCCGCGGTCGGGCTGCAGCTCCACTAGCGCCAAGTaGCAGTTCTGGGTGGTGCAGCAGGCGCGCACGCAG +
Preference number: 6 (lower is better)
Translates to: SPRSGCSSTSAK*QFWVVQQARTQ
Trigger: CTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS GCA 72 bp AAGCAGGCGGCGATGGCGTCCTCCCCGCGGTCGGGCTaGAGCTCCACTAGCGCCAAGTTGCAGTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: KQAAMASSPRSG*SSTSAKLQFWV
Trigger: CACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGACCGCGGGGAGGACGCCATCGCCGCCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CCA 72 bp TCGGGCTGCAGCTCCACTAGCGCCAAGTTGCAGTTCTaGGTGGTGCAGCAGGCGCGCACGCAGTCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SGCSSTSAKLQF*VVQQARTQSQP
Trigger: GGGCTGGGACTGCGTGCGCGCCTGCTGCACCACCCAGAACTGCAACTTGGCGCTAGTGGAGCTGCAGCCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CAA 72 bp GACTCCAGGAAGGTAGCTCCGTTGCTGACCGAGGCGTaGGTGTCCAGCACGAAGCCAGGCACCCCGGCGGTA +
Preference number: 6 (lower is better)
Translates to: DSRKVAPLLTEA*VSSTKPGTPAV
Trigger: TACCGCCGGGGTGCCTGGCTTCGTGCTGGACACCAACGCCTCGGTCAGCAACGGAGCTACCTTCCTGGAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CAA 90 bp ACGGTGGGGGACTCCAGGAAGGTAGCTCCGTTGCTGACCGAGGCGTaGGTGTCCAGCACGAAGCCAGGCACCCCGGCGGTAAAGCTGTTC +
Preference number: 6 (lower is better)
Translates to: TVGDSRKVAPLLTEA*VSSTKPGTPAVKLF
Trigger: GAACAGCTTTACCGCCGGGGTGCCTGGCTTCGTGCTGGACACCAACGCCTCGGTCAGCAACGGAGCTACCTTCCTGGAGTCCCCCACCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS CCA 72 bp TTTCACAGGCAGCCTCGTCGGAGGCGTCGGGGCAGTTaGGGGTGTCGTCACACTCCAGGAAACTGTCGATGC +
Preference number: 6 (lower is better)
Translates to: FHRQPRRRRRGS*GCRHTPGNCRC
Trigger: GCATCGACAGTTTCCTGGAGTGTGACGACACCCCCAACTGCCCCGACGCCTCCGACGAGGCTGCCTGTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000566642.1
ENST00000568580.5
CDS CCA 72 bp CCAGCGCGGGATGCTCTCCTTGCAGAGTCCTGTGTCTaGCAGGTCCACGCAGTGCCCTTTGTCACTGGGGAA +
Preference number: 6 (lower is better)
Translates to: PARDALLAESCV*QVHAVPFVTGE
Trigger: TTCCCCAGTGACAAAGGGCACTGCGTGGACCTGCCAGACACAGGACTCTGCAAGGAGAGCATCCCGCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000566642.1
ENST00000566928.5
ENST00000568580.5
ENST00000569589.1
CDS GCA 72 bp CACACTCCAGGAAACTGTCGATGCAGCAGCCATTGCTaGAGCGGAACTGGGTGGGCTGACAGGTGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: HTPGNCRCSSHC*SGTGWADRCQS
Trigger: GCTCTGGCACCTGTCAGCCCACCCAGTTCCGCTGCAGCAATGGCTGCTGCATCGACAGTTTCCTGGAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000566642.1
ENST00000568580.5
CDS GCA 72 bp CAAGTGCCCAGGGCCCACCTTCTACTTGGCCCTCTCTaGCCAGACACAGCACATCCCCCATTCCCTTTCCAC +
Preference number: 6 (lower is better)
Translates to: QVPRAHLLLGPL*PDTAHPPFPFH
Trigger: GTGGAAAGGGAATGGGGGATGTGCTGTGTCTGGGCAGAGAGGGCCAAGTAGAAGGTGGGCCCTGGGCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS GCA 72 bp GGGTGGAAGGGAGGTCAGGCTCAAGCAAAGAACAAGTaGCCAGGGCCCACCTTCTACTTGGCCCTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GWKGGQAQAKNK*PGPTFYLALSA
Trigger: GGCAGAGAGGGCCAAGTAGAAGGTGGGCCCTGGGCACTTGTTCTTTGCTTGAGCCTGACCTCCCTTCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS CCA 72 bp AGCGTGGGAAAGAGCCCCGGCAGCGACCCACCTTGTTaGATGCGAGGCAGTAGTCTTCTGTCTGCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: SVGKSPGSDPPC*MRGSSLLSAWW
Trigger: CCACCAAGCAGACAGAAGACTACTGCCTCGCATCCAACAAGGTGGGTCGCTGCCGGGGCTCTTTCCCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000564375.5
ENST00000566928.5
ENST00000568580.5
ENST00000568823.5
CDS CCA 72 bp CTTGCAGATCTGCTCCGTGGGGTCATAGTACCAGCGTaGGAAAGAGCCCCGGCAGCGACCCACCTTGTTGGA +
Preference number: 6 (lower is better)
Translates to: LADLLRGVIVPA*ERAPAATHLVG
Trigger: TCCAACAAGGTGGGTCGCTGCCGGGGCTCTTTCCCACGCTGGTACTATGACCCCACGGAGCAGATCTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000564375.5
ENST00000566928.5
ENST00000568580.5
CDS CCA 72 bp CCCTTTCCACCAACCCCACTCCTGCCCCACGCAAACTaGGCAGATCCTCATAGGACGATGCTGGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: PFPPTPLLPHAN*ADPHRTMLGWK
Trigger: CTTCCAGCCCAGCATCGTCCTATGAGGATCTGCCCAGTTTGCGTGGGGCAGGAGTGGGGTTGGTGGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS GCA 72 bp GGTCCACGCAGTGCCCTTTGTCACTGGGGAAATGGATaGGCTGGAGCTCGTCAAAGCCACTCGTGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: GPRSALCHWGNG*AGARQSHSCLQ
Trigger: CTGCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566642.1
CDS CCA 72 bp ACAGTGGAGCTGGCAGGGGTGGGTGGTGGGTGGTGGTaGTGTCCGTGGAAGTCCTTTCTCTGGTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: TVELAGVGGGWW*CPWKSFLWFLK
Trigger: CTTCAAGAACCAGAGAAAGGACTTCCACGGACACCACCACCACCCACCACCCACCCCTGCCAGCTCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000568580.5
ENST00000569589.1
CDS CCA 72 bp GGCAGGTCCACGCAGTGCCCTTTGTCACTGGGGAAATaGATGCGCTGGAGCTCGTCAAAGCCACTCGTGTCT +
Preference number: 6 (lower is better)
Translates to: GRSTQCPLSLGK*MRWSSSKPLVS
Trigger: AGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566642.1
ENST00000566928.5
ENST00000569589.1
CDS CCA 72 bp ACGCAGTGCCCTTTGTCACTGGGGAAATGGATGCGCTaGAGCTCGTCAAAGCCACTCGTGTCTGGATGGCGC +
Preference number: 6 (lower is better)
Translates to: TQCPLSLGKWMR*SSSKPLVSGWR
Trigger: GCGCCATCCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566928.5
ENST00000569589.1
CDS CAA 90 bp GGTCAGGCTCAAGCAAAGAACAAGTGCCCAGGGCCCACCTTCTACTaGGCCCTCTCTGCCCAGACACAGCACATCCCCCATTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: GQAQAKNKCPGPTFY*ALSAQTQHIPHSLS
Trigger: GGAAAGGGAATGGGGGATGTGCTGTGTCTGGGCAGAGAGGGCCAAGTAGAAGGTGGGCCCTGGGCACTTGTTCTTTGCTTGAGCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563135.5
CDS GCA 72 bp GGTCCACGCAGTGCCCTTTGTCACTGGGGAAATGGATaGGCTGGAGCTCGTCAAAGCCACTCGTGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: GPRSALCHWGNG*AGARQSHSCLD
Trigger: ATCCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566928.5
ENST00000569589.1
CDS CCA 72 bp GGCAGGTCCACGCAGTGCCCTTTGTCACTGGGGAAATaGATGCGCTGGAGCTCGTCAAAGCCACTCGTGTAT +
Preference number: 6 (lower is better)
Translates to: GRSTQCPLSLGK*MRWSSSKPLVY
Trigger: ATACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000568580.5
CDS CCA 72 bp ACGCAGTGCCCTTTGTCACTGGGGAAATGGATGCGCTaGAGCTCGTCAAAGCCACTCGTGTCTGCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: TQCPLSLGKWMR*SSSKPLVSAER
Trigger: CCTCTCTGCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566642.1
CDS CCA 72 bp GGTGCCTTCCTTGAGTCCCCACAGTTCCACCTGGTTTaGGTCTTTCCTCTCTACCCTGACATCCGTGTCACC +
Preference number: 6 (lower is better)
Translates to: GAFLESPQFHLV*VFPLYPDIRVT
Trigger: GGTGACACGGATGTCAGGGTAGAGAGGAAAGACCCAAACCAGGTGGAACTGTGGGGACTCAAGGAAGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000566928.5
ENST00000568580.5
CDS CAA 72 bp TCTGTCTGCTTGGTGGACAGCACAGTGACTGTGACGTaGGCCGTGTCCTCTGGGTGGTCTGAGCTAGTCACT +
Preference number: 6 (lower is better)
Translates to: SVCLVDSTVTVT*AVSSGWSELVT
Trigger: AGTGACTAGCTCAGACCACCCAGAGGACACGGCCAACGTCACAGTCACTGTGCTGTCCACCAAGCAGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000564375.5
ENST00000566928.5
ENST00000568580.5
ENST00000568823.5
CDS GCA 72 bp CCATGGAGGGGCCTTGCACACCCCGACAGGCTAGAATaGACTCTTCTTCCCGAAGGTAGTTGTTCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: PWRGLAHPDRLE*TLLPEGSCSCC
Trigger: GCAACAAGAACAACTACCTTCGGGAAGAAGAGTGCATTCTAGCCTGTCGGGGTGTGCAAGGCCCCTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562057.6
ENST00000566928.5
CDS CCA 72 bp TCTGTGTTTTCCACATCCTTCAGCACCAGGGGTTCCTaGGGTTGTACCTTCAAGTCTATGCCTGCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SVFSTSFSTRGS*GCTFKSMPAQA
Trigger: GGCCTGGGCAGGCATAGACTTGAAGGTACAACCCCAGGAACCCCTGGTGCTGAAGGATGTGGAAAACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563656.5
ENST00000568580.5
ENST00000568823.5
CDS GCA 72 bp GGTCCACGCAGTGCCCTTTGTCACTGGGGAAATGGATaGGCTGGAGCTCGTCAAAGCCACTCGTGTATTTTT +
Preference number: 6 (lower is better)
Translates to: GPRSALCHWGNG*AGARQSHSCIF
Trigger: AAAAATACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGTGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000568580.5
CDS GCA 72 bp ATGGATGCGCTGGAGCTCGTCAAAGCCACTCGTGTCTaGAGAGAGGAAAGGTCAGAGTCTCAGACCCAACAA +
Preference number: 6 (lower is better)
Translates to: MDALELVKATRV*REERSESQTQQ
Trigger: TTGTTGGGTCTGAGACTCTGACCTTTCCTCTCTGCAGACACGAGTGGCTTTGACGAGCTCCAGCGCATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566642.1
CDS GCA 72 bp TCAAAGGCCCACCTTGCACACCCCGACAGGCTAGAATaGACTCTTCTTCCCGAAGGTAGTTGTTCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: SKAHLAHPDRLE*TLLPEGSCSCC
Trigger: GCAACAAGAACAACTACCTTCGGGAAGAAGAGTGCATTCTAGCCTGTCGGGGTGTGCAAGGTGGGCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344051.8
ENST00000568580.5
ENST00000569589.1
CDS GCA 72 bp TGCCAGAGCACACTTGCACACCCCGACAGGCTAGAATaGACTCTTCTTCCCGAAGGTAGTTGTTCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: CQSTLAHPDRLE*TLLPEGSCSCC
Trigger: GCAACAAGAACAACTACCTTCGGGAAGAAGAGTGCATTCTAGCCTGTCGGGGTGTGCAAGTGTGCTCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564375.5
CDS CCA 72 bp ACGCAGTGCCCTTTGTCACTGGGGAAATGGATGCGCTaGAGCTCGTCAAAGCCACTCGTGTATTTTTCACAG +
Preference number: 6 (lower is better)
Translates to: TQCPLSLGKWMR*SSSKPLVYFSQ
Trigger: CTGTGAAAAATACACGAGTGGCTTTGACGAGCTCCAGCGCATCCATTTCCCCAGTGACAAAGGGCACTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344051.8
ENST00000562057.6
ENST00000563135.5
ENST00000564375.5
ENST00000568580.5