Pregenerated sensors for SPINK9 (Homo sapiens)

Ensembl gene IDs: ENSG00000204909

Ensembl transcript IDs: ENST00000377906.2, ENST00000511717.6

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	CTACATATGGTGATGAGTAGGCAATGTGGCATAGATAATATGGGAACAGAAATGCTCATAGTACTGAAGTaGCCAAGGCAGTCAGATGTA	+
Preference number: 4 (lower is better) Translates to: LHMVMSRQCGIDNMGTEMLIVLK*PRQSDV Trigger: TACATCTGACTGCCTTGGCCACTTCAGTACTATGAG...CATTTCTGTTCCCATATTATCTATGCCACATTGCCTACTCATCACCATATGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377906.2
CDS-3UTR TCA 90 bp	CTACATATGGTGATGAGTAGGCAATGTGGCATAGATAATATGGGAACAGAAATGTGGCACATTCTATACTaGACATGGTTGCAAGTGTCA	+
Preference number: 4 (lower is better) Translates to: LHMVMSRQCGIDNMGTEMWHILY*TWLQVS Trigger: TGACACTTGCAACCATGTTCAGTATAGAATGTGCCA...CATTTCTGTTCCCATATTATCTATGCCACATTGCCTACTCATCACCATATGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377906.2
CDS-3UTR GCA 90 bp	CAAAGAAATCTACATATGGTGATGAGTAGGCAATGTGGCATAGATAATATGGGAACTTTTTATAATGACTaGAGTCAACCATCTGTTTCG	+
Preference number: 4 (lower is better) Translates to: QRNLHMVMSRQCGIDNMGTFYND*SQPSVS Trigger: CGAAACAGATGGTTGACTGCAGTCATTATAAAAAGT...TCCCATATTATCTATGCCACATTGCCTACTCATCACCATATGTAGATTTCTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377906.2
CDS GCA 90 bp	TGTTTCGTCTGTTTGGCACATTCTATACCTTGTAAATGTTCAGGTTaGGTTAAGCCCATGAGTCTCCTGGGTTCATTGTGTTCTCCTGAG	+
Preference number: 5 (lower is better) Translates to: CFVCLAHSIPCKCSG*VKPMSLLGSLCSPE Trigger: CTCAGGAGAACACAATGAACCCAGGAGACTCATGGGCTTAACGCAACCTGAACATTTACAAGGTATAGAATGTGCCAAACAGACGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511717.6
CDS-3UTR CAA 90 bp	CTACATATGGTGATGAGTAGGCAATGTGGCATAGATAATATGGGAACAGAAATGATCTGTTTCGTCTGTTaGGCACATTCTATACTGAAC	+
Preference number: 5 (lower is better) Translates to: LHMVMSRQCGIDNMGTEMICFVC*AHSILN Trigger: GTTCAGTATAGAATGTGCCAAACAGACGAAACAGAT...CATTTCTGTTCCCATATTATCTATGCCACATTGCCTACTCATCACCATATGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377906.2
CDS-3UTR CAA 90 bp	AGAAATCTACATATGGTGATGAGTAGGCAATGTGGCATAGATAATATGGGAACACATCAGATCCACAAATaGGATCATACATATGATGAC	+
Preference number: 5 (lower is better) Translates to: RNLHMVMSRQCGIDNMGTHQIHK*DHTYDD Trigger: GTCATCATATGTATGATCCAATTTGTGGATCTGATG...TGTTCCCATATTATCTATGCCACATTGCCTACTCATCACCATATGTAGATTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377906.2
CDS TCA 72 bp	CGGCTCCTGAGGCTTTTGCATTCTTCATGTAGTTCTTaGGCCTTGGCTTTCAGCTCCATCAGCTCCTTTAAG	+
Preference number: 6 (lower is better) Translates to: RLLRLLHSSCSS*ALAFSSISSFK Trigger: CTTAAAGGAGCTGATGGAGCTGAAAGCCAAGGCTCAAGAACTACATGAAGAATGCAAAAGCCTCAGGAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511717.6
CDS GCA 72 bp	TGTTTGGCACATTCTATACCTTGTAAATGTTCAGGTTaGGTTAAGCCCATGAGTCTCCTGGGTTCATTGTGT	+
Preference number: 6 (lower is better) Translates to: CLAHSIPCKCSG*VKPMSLLGSLC Trigger: ACACAATGAACCCAGGAGACTCATGGGCTTAACGCAACCTGAACATTTACAAGGTATAGAATGTGCCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511717.6

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