Pregenerated sensors for SPINK4 (Homo sapiens)
Ensembl gene IDs: ENSG00000122711Ensembl transcript IDs: ENST00000379721.4, ENST00000379725.5
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | GTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCCCAGCTGACACTTCATaGCTTGAGGTGCTCCTGTGG | + |
Preference number: 2 (lower is better) Translates to: VGLDLLFHVISSPCPPLFPADTS*LEVLLW Trigger: CCACAGGAGCACCTCAAGCCATGAAGTGTCAGCTGG...GAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR TCA 90 bp | TTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTGGCGGACGGCCATGCTaGTCCTGGGATAGTGTAGCC | + |
Preference number: 4 (lower is better) Translates to: LGWIFYFMSYPLHAHHCSGGRPC*SWDSVA Trigger: GGCTACACTATCCCAGGATCAGCATGGCCGTCCGCC...AGAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR GCA 90 bp | CAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTAGGGAGCTTTCCTGCTaGCACTGGCACTTCCCTGTC | + |
Preference number: 4 (lower is better) Translates to: QLGWIFYFMSYPLHAHHCRELSC*HWHFPV Trigger: GACAGGGAAGTGCCAGTGGCAGCAGGAAAGCTCCCT...ACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | TTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTAGGGCGATTACCCACTaGCGGACGGCCATGCTGATC | + |
Preference number: 4 (lower is better) Translates to: LGWIFYFMSYPLHAHHCSRAITH*RTAMLI Trigger: GATCAGCATGGCCGTCCGCCAGTGGGTAATCGCCCT...AGAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR GCA 90 bp | CAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTGAAAGGGAGCTTTCCTaGTGCCACTGGCACTTCCCT | + |
Preference number: 4 (lower is better) Translates to: QLGWIFYFMSYPLHAHHCERELS*CHWHFP Trigger: AGGGAAGTGCCAGTGGCAGCAGGAAAGCTCCCTTTC...ACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | CAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTGCCGCAGACCAGGTTaGACATCTGGGAACAGGTTG | + |
Preference number: 4 (lower is better) Translates to: QLGWIFYFMSYPLHAHHCCRRPG*TSGNRL Trigger: CAACCTGTTCCCAGATGTCCAACCTGGTCTGCGGCA...ACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | CAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTCCAGCTGACACTTCATaGCTTGAGGTGCTCCTGTGG | + |
Preference number: 4 (lower is better) Translates to: QLGWIFYFMSYPLHAHHCPADTS*LEVLLW Trigger: CCACAGGAGCACCTCAAGCCATGAAGTGTCAGCTGG...ACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR GCA 90 bp | TCAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGGTCATATCCTCTCCATaGCCACCACTGTTCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: SVGLDLLFHVISSPCPPLVISSP*PPLFSS Trigger: GCTGGAGAACAGTGGTGGGCATGGAGAGGATATGAC...CAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | AGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTTTCCTGCTGCCACTaGCACTTCCCTGTCCACAAC | + |
Preference number: 4 (lower is better) Translates to: SWAGSFISCHILSMPTTVLSCCH*HFPVHN Trigger: GTTGTGGACAGGGAAGTGCCAGTGGCAGCAGGAAAG...AACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | CAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTCGGGCCAAGCAGAGCTaGCATTCATTCGTATATGTG | + |
Preference number: 4 (lower is better) Translates to: QLGWIFYFMSYPLHAHHCRAKQS*HSFVYV Trigger: CACATATACGAATGAATGCCAGCTCTGCTTGGCCCG...ACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | GTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCCTTGAGGTGCTCCTGTaGGATCAGCATTTGCCATCT | + |
Preference number: 4 (lower is better) Translates to: VGLDLLFHVISSPCPPLFLEVLL*DQHLPS Trigger: AGATGGCAAATGCTGATCCCACAGGAGCACCTCAAG...GAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR TCA 90 bp | TCAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGATTCATTCGTATATGTaGGCCCATCAGTGCCGCAGA | + |
Preference number: 4 (lower is better) Translates to: SVGLDLLFHVISSPCPPLIHSYM*AHQCRR Trigger: TCTGCGGCACTGATGGGCTCACATATACGAATGAAT...CAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR GCA 90 bp | TTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTCTTCATGGCTTGAGGTaGTCCTGTGGGATCAGCATT | + |
Preference number: 4 (lower is better) Translates to: LGWIFYFMSYPLHAHHCSLHGLR*SCGISI Trigger: AATGCTGATCCCACAGGAGCACCTCAAGCCATGAAG...AGAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | TTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTACCAGGTTGGACATCTaGGAACAGGTTGGAGACTCT | + |
Preference number: 4 (lower is better) Translates to: LGWIFYFMSYPLHAHHCSTRLDI*EQVGDS Trigger: AGAGTCTCCAACCTGTTCCCAGATGTCCAACCTGGT...AGAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | TTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTCATCTGGGAACAGGTTaGAGACTCTACCATGTGTTC | + |
Preference number: 4 (lower is better) Translates to: LGWIFYFMSYPLHAHHCSHLGTG*RLYHVF Trigger: GAACACATGGTAGAGTCTCCAACCTGTTCCCAGATG...AGAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | TTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTTCTGGATGTCCTGTTTaGTTTTTATCCGGGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: LGWIFYFMSYPLHAHHCSSGCPV*FLSGPS Trigger: GCTTGGCCCGGATAAAAACCAAACAGGACATCCAGA...AGAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR TCA 90 bp | CAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTATTTGCCATCTTTCATaGTCTGGATGTCCTGTTTGG | + |
Preference number: 4 (lower is better) Translates to: QLGWIFYFMSYPLHAHHCICHLS*SGCPVW Trigger: CCAAACAGGACATCCAGATCATGAAAGATGGCAAAT...ACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CCA 90 bp | AGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCCATCTTTCATGATCTaGATGTCCTGTTTGGTTTTT | + |
Preference number: 4 (lower is better) Translates to: SWAGSFISCHILSMPTTVPSFMI*MSCLVF Trigger: AAAAACCAAACAGGACATCCAGATCATGAAAGATGG...AACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS TCA 90 bp | TGGTTTTTATCCGGGCCAAGCAGAGCTGGCATTCATTCGTATATGTaGGCCCATCAGTGCCGCAGACCAGGTTGGACATCTGGGAACAGG | + |
Preference number: 5 (lower is better) Translates to: WFLSGPSRAGIHSYM*AHQCRRPGWTSGNR Trigger: CCTGTTCCCAGATGTCCAACCTGGTCTGCGGCACTGATGGGCTCACATATACGAATGAATGCCAGCTCTGCTTGGCCCGGATAAAAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS GCA 90 bp | TGTGTGTGCCCTCCAGAGTCCAGAGAAGGTGAGGTGAGCTCCCAATaGCCAGGATCATCAGGATGTAGACTTCTTGCTATTCTACCTGTG | + |
Preference number: 5 (lower is better) Translates to: CVCPPESREGEVSSQ*PGSSGCRLLAILPV Trigger: CACAGGTAGAATAGCAAGAAGTCTACATCCTGATGATCCTGGGCATTGGGAGCTCACCTCACCTTCTCTGGACTCTGGAGGGCACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379725.5 |
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CDS CCA 90 bp | TCATATCCTCTCCATGCCCACCACTGTTCTCCAGCTGACACTTCATaGCTTGAGGTGCTCCTGTGGGATCAGCATTTGCCATCTTTCATG | + |
Preference number: 5 (lower is better) Translates to: SYPLHAHHCSPADTS*LEVLLWDQHLPSFM Trigger: CATGAAAGATGGCAAATGCTGATCCCACAGGAGCACCTCAAGCCATGAAGTGTCAGCTGGAGAACAGTGGTGGGCATGGAGAGGATATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS-3UTR CAA 90 bp | GTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCGTGCCGCAGACCAGGTaGGACATCTGGGAACAGGTT | + |
Preference number: 5 (lower is better) Translates to: VGLDLLFHVISSPCPPLFVPQTR*DIWEQV Trigger: AACCTGTTCCCAGATGTCCAACCTGGTCTGCGGCAC...GAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS TCA 90 bp | CATGGCTTGAGGTGCTCCTGTGGGATCAGCATTTGCCATCTTTCATaGTCTGGATGTCCTGTTTGGTTTTTATCCGGGCCAAGCAGAGCT | + |
Preference number: 5 (lower is better) Translates to: HGLRCSCGISICHLS*SGCPVWFLSGPSRA Trigger: AGCTCTGCTTGGCCCGGATAAAAACCAAACAGGACATCCAGATCATGAAAGATGGCAAATGCTGATCCCACAGGAGCACCTCAAGCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS CCA 90 bp | CTTGAGGTGCTCCTGTGGGATCAGCATTTGCCATCTTTCATGATCTaGATGTCCTGTTTGGTTTTTATCCGGGCCAAGCAGAGCTGGCAT | + |
Preference number: 5 (lower is better) Translates to: LEVLLWDQHLPSFMI*MSCLVFIRAKQSWH Trigger: ATGCCAGCTCTGCTTGGCCCGGATAAAAACCAAACAGGACATCCAGATCATGAAAGATGGCAAATGCTGATCCCACAGGAGCACCTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS CCA 90 bp | CACCACTGTTCTCCAGCTGACACTTCATGGCTTGAGGTGCTCCTGTaGGATCAGCATTTGCCATCTTTCATGATCTGGATGTCCTGTTTG | + |
Preference number: 5 (lower is better) Translates to: HHCSPADTSWLEVLL*DQHLPSFMIWMSCL Trigger: CAAACAGGACATCCAGATCATGAAAGATGGCAAATGCTGATCCCACAGGAGCACCTCAAGCCATGAAGTGTCAGCTGGAGAACAGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS-3UTR CAA 90 bp | CAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTCTGACACTTCATGGCTaGAGGTGCTCCTGTGGGATC | + |
Preference number: 5 (lower is better) Translates to: QLGWIFYFMSYPLHAHHCLTLHG*RCSCGI Trigger: GATCCCACAGGAGCACCTCAAGCCATGAAGTGTCAG...ACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS CCA 90 bp | AATGCCCAGGATCATCAGGATGTAGACTTCTTGCTATTCTACCTGTaGTCTGGCAGAGGGGGAGCTAGGGCAATAAATACCCTGGCATAT | + |
Preference number: 5 (lower is better) Translates to: NAQDHQDVDFLLFYL*SGRGGARAINTLAY Trigger: ATATGCCAGGGTATTTATTGCCCTAGCTCCCCCTCTGCCAGACCACAGGTAGAATAGCAAGAAGTCTACATCCTGATGATCCTGGGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379725.5 |
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CDS-3UTR CAA 90 bp | GTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCCACAGATGGGCATTCTaGAGAAAGGGAGCTTTCCTG | + |
Preference number: 5 (lower is better) Translates to: VGLDLLFHVISSPCPPLFHRWAF*RKGAFL Trigger: CAGGAAAGCTCCCTTTCTCAAGAATGCCCATCTGTG...GAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CAA 90 bp | TCAGTTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGACATCTGGGAACAGGTaGGAGACTCTACCATGTGTT | + |
Preference number: 5 (lower is better) Translates to: SVGLDLLFHVISSPCPPLTSGNR*ETLPCV Trigger: AACACATGGTAGAGTCTCCAACCTGTTCCCAGATGT...CAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS-3UTR CAA 90 bp | TTGGGCTGGATCTTTTATTTCATGTCATATCCTCTCCATGCCCACCACTGTTCTATCTGGATGTCCTGTTaGGTTTTTATCCGGGCCAAG | + |
Preference number: 5 (lower is better) Translates to: LGWIFYFMSYPLHAHHCSIWMSC*VFIRAK Trigger: CTTGGCCCGGATAAAAACCAAACAGGACATCCAGAT...AGAACAGTGGTGGGCATGGAGAGGATATGACATGAAATAAAAGATCCAGCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379721.4 |
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CDS TCA 72 bp | TCCGGGCCAAGCAGAGCTGGCATTCATTCGTATATGTaGGCCCATCAGTGCCGCAGACCAGGTTGGACATCT | + |
Preference number: 6 (lower is better) Translates to: SGPSRAGIHSYM*AHQCRRPGWTS Trigger: AGATGTCCAACCTGGTCTGCGGCACTGATGGGCTCACATATACGAATGAATGCCAGCTCTGCTTGGCCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS CAA 72 bp | TTCGTATATGTGAGCCCATCAGTGCCGCAGACCAGGTaGGACATCTGGGAACAGGTTGGAGACTCTACCATG | + |
Preference number: 6 (lower is better) Translates to: FVYVSPSVPQTR*DIWEQVGDSTM Trigger: CATGGTAGAGTCTCCAACCTGTTCCCAGATGTCCAACCTGGTCTGCGGCACTGATGGGCTCACATATACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS CAA 90 bp | TGGCATTCATTCGTATATGTGAGCCCATCAGTGCCGCAGACCAGGTaGGACATCTGGGAACAGGTTGGAGACTCTACCATGTGTTCACAG | + |
Preference number: 6 (lower is better) Translates to: WHSFVYVSPSVPQTR*DIWEQVGDSTMCSQ Trigger: CTGTGAACACATGGTAGAGTCTCCAACCTGTTCCCAGATGTCCAACCTGGTCTGCGGCACTGATGGGCTCACATATACGAATGAATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS GCA 72 bp | GCTAGGGCAATAAATACCCTGGCATATCTCTCCTCCTaGCCTCACGTTCTTTCCAGTACCTCCCATTTGCAG | + |
Preference number: 6 (lower is better) Translates to: ARAINTLAYLSS*PHVLSSTSHLQ Trigger: CTGCAAATGGGAGGTACTGGAAAGAACGTGAGGGCAGGAGGAGAGATATGCCAGGGTATTTATTGCCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379725.5 |
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CDS GCA 72 bp | CCTCCAGAGTCCAGAGAAGGTGAGGTGAGCTCCCAATaGCCAGGATCATCAGGATGTAGACTTCTTGCTATT | + |
Preference number: 6 (lower is better) Translates to: PPESREGEVSSQ*PGSSGCRLLAI Trigger: AATAGCAAGAAGTCTACATCCTGATGATCCTGGGCATTGGGAGCTCACCTCACCTTCTCTGGACTCTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379725.5 |
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CDS CCA 72 bp | ATGTCCTGTTTGGTTTTTATCCGGGCCAAGCAGAGCTaGCATTCATTCGTATATGTGAGCCCATCAGTGCCG | + |
Preference number: 6 (lower is better) Translates to: MSCLVFIRAKQS*HSFVYVSPSVP Trigger: CGGCACTGATGGGCTCACATATACGAATGAATGCCAGCTCTGCTTGGCCCGGATAAAAACCAAACAGGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS CAA 90 bp | CCAGCTGACACTTCATGGCTTGAGGTGCTCCTGTGGGATCAGCATTaGCCATCTTTCATGATCTGGATGTCCTGTTTGGTTTTTATCCGG | + |
Preference number: 6 (lower is better) Translates to: PADTSWLEVLLWDQH*PSFMIWMSCLVFIR Trigger: CCGGATAAAAACCAAACAGGACATCCAGATCATGAAAGATGGCAAATGCTGATCCCACAGGAGCACCTCAAGCCATGAAGTGTCAGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS TCA 72 bp | AGGTGCTCCTGTGGGATCAGCATTTGCCATCTTTCATaGTCTGGATGTCCTGTTTGGTTTTTATCCGGGCCA | + |
Preference number: 6 (lower is better) Translates to: RCSCGISICHLS*SGCPVWFLSGP Trigger: TGGCCCGGATAAAAACCAAACAGGACATCCAGATCATGAAAGATGGCAAATGCTGATCCCACAGGAGCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS CCA 72 bp | CTCCTGTGGGATCAGCATTTGCCATCTTTCATGATCTaGATGTCCTGTTTGGTTTTTATCCGGGCCAAGCAG | + |
Preference number: 6 (lower is better) Translates to: LLWDQHLPSFMI*MSCLVFIRAKQ Trigger: CTGCTTGGCCCGGATAAAAACCAAACAGGACATCCAGATCATGAAAGATGGCAAATGCTGATCCCACAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379721.4 ENST00000379725.5 |
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CDS CCA 72 bp | GATCATCAGGATGTAGACTTCTTGCTATTCTACCTGTaGTCTGGCAGAGGGGGAGCTAGGGCAATAAATACC | + |
Preference number: 6 (lower is better) Translates to: DHQDVDFLLFYL*SGRGGARAINT Trigger: GGTATTTATTGCCCTAGCTCCCCCTCTGCCAGACCACAGGTAGAATAGCAAGAAGTCTACATCCTGATGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379725.5 |