Pregenerated sensors for SPINK2 (Homo sapiens)
Ensembl gene IDs: ENSG00000128040Ensembl transcript IDs: ENST00000248701.8, ENST00000504762.1, ENST00000506738.6, ENST00000616980.1, ENST00000618802.3, ENST00000631082.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTCTATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: YTWLSSIPALRKCVLTNLYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...GAGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTTAAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGTATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: FSLNYPSLHMAVFHTCSQYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...CTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTTAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| 3UTR-3UTR TCA 90 bp | TTTAAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATTATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: FKLSITTHGCLPYLLSENYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...ATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| 3UTR-3UTR GCA 90 bp | CACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATTTCTTTTCTGTAAACTaGTCCATCAGCAGGGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: HYTWLSSIPALRKCVLTNFFSVN*SISRVH Trigger: ATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAA...ATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | AGCAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGCCGCGCCGGCTGTCTTaGCCCTGCGGTCTGTTACCT | + |
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Preference number: 4 (lower is better) Translates to: SNAQVTWAVSLTPGAKAKPRRLS*PCGLLP Trigger: AGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGG...CTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR TCA 90 bp | GTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAACAAGGATTCGGTCCGCCGCCGGTCTaGCTCCCAAACCCGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: VTWAVSLTPGAKAKKQGFGPPPV*LPNPLF Trigger: GAAAAGCGGGTTTGGGAGTCAGACCGGCGGCGGACC...GAATCCTTGTTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | ACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAACAAGGCCGCGCCGGCTGTCTTaGCCCTGCGGTCTGTTACCT | + |
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Preference number: 4 (lower is better) Translates to: TSHLGSKLNSRSKSQETRPRRLS*PCGLLP Trigger: AGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGG...CCTTGTTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR CCA 90 bp | CAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAACCCTGGCAGGTCCTCTaGGGAACCGCCAGTAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QCTSHLGSKLNSRSKSQEPWQVL*GTASNG Trigger: CCCGTTACTGGCGGTTCCCCAGAGGACCTGCCAGGG...TTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618802.3 |
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| CDS-3UTR TCA 90 bp | AATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAAGGTCCGCCGCCGGTCTaGCTCCCAAACCCGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: NAQVTWAVSLTPGAKAKKGPPPV*LPNPLF Trigger: GAAAAGCGGGTTTGGGAGTCAGACCGGCGGCGGACC...TTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | AATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAACTGCGGTCTGTTACCTaGGCCACTCGCAGGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NAQVTWAVSLTPGAKAKKLRSVT*ATRRER Trigger: GCGCTCCCTGCGAGTGGCGCAGGTAACAGACCGCAG...TTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | CAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAACGGCTGTCTTGCCCCTaGGGTCTGTTACCTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCTSHLGSKLNSRSKSQERLSCP*GLLPAP Trigger: TGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCG...TTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR TCA 90 bp | CCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACGGTCCGCCGCCGGTCTaGCTCCCAAACCCGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: PSLHMAVFHTCSQKMCVNGPPPV*LPNPLF Trigger: GAAAAGCGGGTTTGGGAGTCAGACCGGCGGCGGACC...GTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | AAGGGGAAATGCAATTTATCTAGTCTGCCAGTGAAGGTGGTCTCTCCATCTTCTCTGCGGTCTGTTACCTaGGCCACTCGCAGGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KGKCNLSSLPVKVVSPSSLRSVT*ATRRER Trigger: GCGCTCCCTGCGAGTGGCGCAGGTAACAGACCGCAG...AGAAGATGGAGAGACCACCTTCACTGGCAGACTAGATAAATTGCATTTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000248701.8 ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | TGGTCTCTCCATCTTCTTTTCTGTAAACTGCTCCATCAGCAGGGTCCATTTCGACGGCTGTCTTGCCCCTaGGGTCTGTTACCTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSLHLLFCKLLHQQGPFRRLSCP*GLLPAP Trigger: TGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCG...TCGAAATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAAGATGGAGAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | ACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAACAAGGGCTCCGAGCGCTACCTaGGAAGGTAACTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSHLGSKLNSRSKSQETRAPSAT*EGNCQE Trigger: CTCCTGGCAGTTACCTTCGCAGGTAGCGCTCGGAGC...CCTTGTTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | GTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAACAAGGATTCGCTCCGAGCGCTACCTaGGAAGGTAACTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTWAVSLTPGAKAKKQGFAPSAT*EGNCQE Trigger: CTCCTGGCAGTTACCTTCGCAGGTAGCGCTCGGAGC...GAATCCTTGTTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | CAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAGCTCCGAGCGCTACCTaGGAAGGTAACTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCTSHLGSKLNSRSKSQEAPSAT*EGNCQE Trigger: CTCCTGGCAGTTACCTTCGCAGGTAGCGCTCGGAGC...TTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR TCA 90 bp | ATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAGGTCCGCCGCCGGTCTaGCTCCCAAACCCGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHHYTWLSSIPALRKCVLGPPPV*LPNPLF Trigger: GAAAAGCGGGTTTGGGAGTCAGACCGGCGGCGGACC...TAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR CCA 90 bp | ATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAGGCTGGCAGGTCCTCTaGGGAACCGCCAGTAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHHYTWLSSIPALRKCVLGWQVL*GTASNG Trigger: CCCGTTACTGGCGGTTCCCCAGAGGACCTGCCAGCC...TAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506738.6 |
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| CDS-3UTR CCA 90 bp | AAGCAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAATATGACCACCTTCCCTaGCAGGTCCTCTGGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KQCTSHLGSKLNSRSKSQYDHLP*QVLWGT Trigger: GGTTCCCCAGAGGACCTGCCAGGGAAGGTGGTCATA...TTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | TACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTCCTGCGGTCTGTTACCTaGGCCACTCGCAGGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: YTWLSSIPALRKCVLTNLLRSVT*ATRRER Trigger: GCGCTCCCTGCGAGTGGCGCAGGTAACAGACCGCAG...GAGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000248701.8 ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | CACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCCGCGCCGGCTGTCTTaGCCCTGCGGTCTGTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: HYTWLSSIPALRKCVLTNPRRLS*PCGLLP Trigger: AGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGG...ATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000248701.8 ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | AATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAAACCTGCGAAGGTAACTaGCAGGAGCAGCAGCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: NAQVTWAVSLTPGAKAKKTCEGN*QEQQRQ Trigger: TTGGCGCTGCTGCTCCTGGCAGTTACCTTCGCAGGT...TTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR CCA 90 bp | AAGGGGAAATGCAATTTATCTAGTCTGCCAGTGAAGGTGGTCTCTCCATCTTCTATACTGAGAGCAGTTTaGCTGGCGTCGCCGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KGKCNLSSLPVKVVSPSSILRAV*LASPRP Trigger: CGGCCTCGGCGACGCCAGCCAAACTGCTCTCAGTAT...AGAAGATGGAGAGACCACCTTCACTGGCAGACTAGATAAATTGCATTTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | CATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAGGCTGCGAAGGTAACTaGCAGGAGCAGCAGCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HHYTWLSSIPALRKCVLTGCEGN*QEQQRQ Trigger: TTGGCGCTGCTGCTCCTGGCAGTTACCTTCGCAGCC...TGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248701.8 |
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| CDS-3UTR GCA 90 bp | AAGGGGAAATGCAATTTATCTAGTCTGCCAGTGAAGGTGGTCTCTCCATCTTCTAGGGATCAGAGAGGCTaGGAAGGTAACTGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KGKCNLSSLPVKVVSPSSRDQRG*EGNCQE Trigger: CTCCTGGCAGTTACCTTCGCAGCCTCTCTGATCCCT...AGAAGATGGAGAGACCACCTTCACTGGCAGACTAGATAAATTGCATTTCCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248701.8 |
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| CDS-3UTR GCA 90 bp | CATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAACCTGCGAAGGTAACTaGCAGGAGCAGCAGCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HHYTWLSSIPALRKCVLTTCEGN*QEQQRQ Trigger: TTGGCGCTGCTGCTCCTGGCAGTTACCTTCGCAGGT...TGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR CCA 90 bp | CTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTAGGGATCAGAGAGGCTaGCAGGTCCTCTGGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: LHMAVFHTCSQKMCVNKSRDQRG*QVLWGT Trigger: GGTTCCCCAGAGGACCTGCCAGCCTCTCTGATCCCT...AGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506738.6 |
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| CDS-3UTR TCA 90 bp | AAGCAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAATATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQCTSHLGSKLNSRSKSQYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...TTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR TCA 90 bp | CAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAATATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QCTSHLGSKLNSRSKSQEYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...TTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR TCA 90 bp | AATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAATATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: NAQVTWAVSLTPGAKAKKYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...TTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | AGCAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGTTCTTTTCTGTAAACTaGTCCATCAGCAGGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SNAQVTWAVSLTPGAKAKFFSVN*SISRVH Trigger: ATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAA...CTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR CCA 90 bp | AAGCAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAAATGCACAAGTCACCTaGGCAGTAAGCTTAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: KQCTSHLGSKLNSRSKSQNAQVT*AVSLTP Trigger: TGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT...TTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR CCA 90 bp | GTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAACAAGGATTCAATGCACAAGTCACCTaGGCAGTAAGCTTAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: VTWAVSLTPGAKAKKQGFNAQVT*AVSLTP Trigger: TGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT...GAATCCTTGTTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR TCA 90 bp | ATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAGAAAACAGACCAAATTaGGGGATCAGAGAGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: IHHYTWLSSIPALRKCVLENRPN*GIREAA Trigger: CGCAGCCTCTCTGATCCCTCAATTTGGTCTGTTTTC...TAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000248701.8 |
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| CDS-3UTR TCA 90 bp | AAGGGGAAATGCAATTTATCTAGTCTGCCAGTGAAGGTGGTCTCTCCATCTTCTTATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KGKCNLSSLPVKVVSPSSYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...AGAAGATGGAGAGACCACCTTCACTGGCAGACTAGATAAATTGCATTTCCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR TCA 90 bp | TATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTGAAAACAGACCAAATTaGGGGATCAGAGAGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: YPSLHMAVFHTCSQKMCVENRPN*GIREAG Trigger: GCCAGCCTCTCTGATCCCTCAATTTGGTCTGTTTTC...AACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000506738.6 |
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| CDS-3UTR TCA 90 bp | AGCAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGATGATTTTAATATTATaGCCACCTTCCCTGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SNAQVTWAVSLTPGAKAKMILIL*PPSLAG Trigger: ACCTGCCAGGGAAGGTGGTCATAATATTAAAATCAT...CTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618802.3 |
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| CDS-3UTR GCA 90 bp | TTTAAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATACCTGCGAAGGTAACTaGCAGGAGCAGCAGCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FKLSITTHGCLPYLLSENTCEGN*QEQQRQ Trigger: TTGGCGCTGCTGCTCCTGGCAGTTACCTTCGCAGGT...ATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR TCA 90 bp | TACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTCGAAAACAGACCAAATTaGGGGATCAGAGAGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YTWLSSIPALRKCVLTNLENRPN*GIREAS Trigger: CGACGCCTCTCTGATCCCTCAATTTGGTCTGTTTTC...GAGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000504762.1 |
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| CDS-3UTR CCA 90 bp | TGGTCTCTCCATCTTCTTTTCTGTAAACTGCTCCATCAGCAGGGTCCATTTCGAATTCATTGGCATAAGTaGACATGTCACTGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: WSLHLLFCKLLHQQGPFRIHWHK*TCHCHT Trigger: TGTGTGGCAGTGACATGTCCACTTATGCCAATGAAT...TCGAAATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAAGATGGAGAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616980.1 |
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| CDS-3UTR TCA 90 bp | CAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAATGGCGTTCTATATTTTaGAAACAGACCAAATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QCTSHLGSKLNSRSKSQEWRSIF*KQTKLR Trigger: CCTCAATTTGGTCTGTTTTCAAAATATAGAACGCCA...TTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 |
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| CDS-3UTR TCA 90 bp | CACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATTATCTAGTCTGCCAGTaGAGGTGGTCTCTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HYTWLSSIPALRKCVLTNYLVCQ*RWSLHL Trigger: AAGATGGAGAGACCACCTTCACTGGCAGACTAGATA...ATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTAAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGCCTGGTAATCTATACTaGGAGCAGTTTGGCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FSLNYPSLHMAVFHTCSQPGNLY*EQFGWR Trigger: ACGCCAGCCAAACTGCTCTCAGTATAGATTACCAGG...CTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTTAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616980.1 |
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| CDS-3UTR CCA 90 bp | CCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACATTCATTGGCATAAGTaGACATGTCACTGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PSLHMAVFHTCSQKMCVNIHWHK*TCHCHT Trigger: TGTGTGGCAGTGACATGTCCACTTATGCCAATGAAT...GTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | TATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTTTCTTTTCTGTAAACTaGTCCATCAGCAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YPSLHMAVFHTCSQKMCVFFSVN*SISRVH Trigger: ATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAA...AACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR CCA 90 bp | ATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAATTCATTGGCATAAGTaGACATGTCACTGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: IHHYTWLSSIPALRKCVLIHWHK*TCHCHT Trigger: TGTGTGGCAGTGACATGTCCACTTATGCCAATGAAT...TAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR CCA 90 bp | TCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAAAATGCACAAGTCACCTaGGCAGTAAGCTTAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLHMAVFHTCSQKMCVNKNAQVT*AVSLTP Trigger: TGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT...TTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR CCA 90 bp | AAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGAATGCACAAGTCACCTaGGCAGTAAGCTTAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLSITTHGCLPYLLSENVNAQVT*AVSLTP Trigger: TGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATT...CACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTAAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGCCTGGTAATCTATACTaGGAGCAGTTTGGCGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSLNYPSLHMAVFHTCSQPGNLY*EQFGVL Trigger: TAGAACGCCAAACTGCTCTCAGTATAGATTACCAGG...CTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTTAAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 |
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| CDS-3UTR GCA 90 bp | AAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTTCTTTTCTGTAAACTaGTCCATCAGCAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLSITTHGCLPYLLSENVFFSVN*SISRVH Trigger: ATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAA...CACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR GCA 90 bp | CTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTTTCTTTTCTGTAAACTaGTCCATCAGCAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHMAVFHTCSQKMCVNKSFFSVN*SISRVH Trigger: ATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAA...AGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR CCA 90 bp | CTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTATTCATTGGCATAAGTaGACATGTCACTGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LHMAVFHTCSQKMCVNKSIHWHK*TCHCHT Trigger: TGTGTGGCAGTGACATGTCCACTTATGCCAATGAAT...AGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR TCA 90 bp | TATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTTGGCGTTCTATATTTTaGAAACAGACCAAATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPSLHMAVFHTCSQKMCVWRSIF*KQTKLR Trigger: CCTCAATTTGGTCTGTTTTCAAAATATAGAACGCCA...AACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 |
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| CDS-3UTR GCA 90 bp | TTTTCTTTAAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGTTCTTTTCTGTAAACTaGTCCATCAGCAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSLNYPSLHMAVFHTCSQFFSVN*SISRVH Trigger: ATGGACCCTGCTGATGGAGCAGTTTACAGAAAAGAA...CTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTTAAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS-3UTR TCA 90 bp | TACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTCTGGCGTTCTATATTTTaGAAACAGACCAAATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTWLSSIPALRKCVLTNLWRSIF*KQTKLR Trigger: CCTCAATTTGGTCTGTTTTCAAAATATAGAACGCCA...GAGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 |
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| CDS-3UTR CCA 90 bp | TTTAAATTATCCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATACAGAGTACATTCATTaGCATAAGTGGACATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKLSITTHGCLPYLLSENTEYIH*HKWTCH Trigger: GTGACATGTCCACTTATGCCAATGAATGTACTCTGT...ATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGGATAATTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 |
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| CDS TCA 90 bp | GCGTCGCCGAGGCCGCCCGGAGCAGGGCAGGGTCCGCCGCCGGTCTaGCTCCCAAACCCGCTTTTCTCCGGAGGTCCCCGCTCGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASPRPPGAGQGPPPV*LPNPLFSGGPRSPG Trigger: TCCTGGCGAGCGGGGACCTCCGGAGAAAAGCGGGTTTGGGAGTCAGACCGGCGGCGGACCCTGCCCTGCTCCGGGCGGCCTCGGCGACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504762.1 ENST00000616980.1 |
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| CDS TCA 90 bp | CCGTCGCCGAGGCCGCCCGGAGCAGGGCAGGGTCCGCCGCCGGTCTaGCTCCCAAACCCGCTTTTCTCCGGAGGTCCCCGCTCGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSPRPPGAGQGPPPV*LPNPLFSGGPRSPG Trigger: TCCTGGCGAGCGGGGACCTCCGGAGAAAAGCGGGTTTGGGAGTCAGACCGGCGGCGGACCCTGCCCTGCTCCGGGCGGCCTCGGCGACGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506738.6 ENST00000618802.3 ENST00000631082.1 |
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| CDS GCA 90 bp | AAGCGCAGCACCGACAGCGCCATCCTCCTCCCGCGCCGGCTGTCTTaGCCCTGCGGTCTGTTACCTGCGCCACTCGCAGGGAGCGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KRSTDSAILLPRRLS*PCGLLPAPLAGSAR Trigger: ACGAGCGCTCCCTGCGAGTGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGGAGGAGGATGGCGCTGTCGGTGCTGCGCTT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS-3UTR CAA 90 bp | GTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAAACAAGGATTCCCCGCGCCGGCTGTCTaGCCCCTGCGGTCTGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: VTWAVSLTPGAKAKKQGFPAPAV*PLRSVT Trigger: GGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGG...GAATCCTTGTTTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR CAA 90 bp | CAATGCACAAGTCACCTGGGCAGTAAGCTTAACTCCAGGAGCAAAAGCCAAGAACCCGCGCCGGCTGTCTaGCCCCTGCGGTCTGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: QCTSHLGSKLNSRSKSQEPAPAV*PLRSVT Trigger: GGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGG...TTCTTGGCTTTTGCTCCTGGAGTTAAGCTTACTGCCCAGGTGACTTGTGCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 |
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| CDS-3UTR CAA 90 bp | CCATCACTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACCCCGCGCCGGCTGTCTaGCCCCTGCGGTCTGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: PSLHMAVFHTCSQKMCVNPAPAV*PLRSVT Trigger: GGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGG...GTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAGTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000248701.8 ENST00000616980.1 |
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| CDS-3UTR CAA 90 bp | CTACACATGGCTGTCTTCCATACCTGCTCTCAGAAAATGTGTGTTAACAAATCTTATACTGAGAGCAGTTaGGCTGGCGTCGCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHMAVFHTCSQKMCVNKSYTESS*AGVAEA Trigger: GGCCTCGGCGACGCCAGCCAAACTGCTCTCAGTATA...AGATTTGTTAACACACATTTTCTGAGAGCAGGTATGGAAGACAGCCATGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616980.1 |
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| CDS GCA 72 bp | CCCGCGCCGGCTGTCTTGCCCCTGCGGTCTGTTACCTaGGCCACTCGCAGGGAGCGCTCGTGCGACGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PAPAVLPLRSVT*ATRRERSCDGA Trigger: CGCCCCGTCGCACGAGCGCTCCCTGCGAGTGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS TCA 72 bp | AGGCCGCCCGGAGCAGGGCAGGGTCCGCCGCCGGTCTaGCTCCCAAACCCGCTTTTCTCCGGAGGTCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: RPPGAGQGPPPV*LPNPLFSGGPR Trigger: GCGGGGACCTCCGGAGAAAAGCGGGTTTGGGAGTCAGACCGGCGGCGGACCCTGCCCTGCTCCGGGCGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS CAA 90 bp | CAAGCGCAGCACCGACAGCGCCATCCTCCTCCCGCGCCGGCTGTCTaGCCCCTGCGGTCTGTTACCTGCGCCACTCGCAGGGAGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QAQHRQRHPPPAPAV*PLRSVTCATRRERS Trigger: CGAGCGCTCCCTGCGAGTGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGGAGGAGGATGGCGCTGTCGGTGCTGCGCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS GCA 72 bp | AGCGCCATCCTCCTCCCGCGCCGGCTGTCTTGCCCCTaGGGTCTGTTACCTGCGCCACTCGCAGGGAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAILLPRRLSCP*GLLPAPLAGSA Trigger: AGCGCTCCCTGCGAGTGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGGAGGAGGATGGCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS GCA 72 bp | ACCGACAGCGCCATCCTCCTCCCGCGCCGGCTGTCTTaGCCCTGCGGTCTGTTACCTGCGCCACTCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TDSAILLPRRLS*PCGLLPAPLAG Trigger: CCCTGCGAGTGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGGAGGAGGATGGCGCTGTCGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS CAA 72 bp | CACCGACAGCGCCATCCTCCTCCCGCGCCGGCTGTCTaGCCCCTGCGGTCTGTTACCTGCGCCACTCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HRQRHPPPAPAV*PLRSVTCATRR Trigger: CCTGCGAGTGGCGCAGGTAACAGACCGCAGGGGCAAGACAGCCGGCGCGGGAGGAGGATGGCGCTGTCGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248701.8 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS GCA 72 bp | AGGTCCCCGCTCGCCAGGACCGCTCCGAGCGCTACCTaGGAAGGTAACTGCCAGGAGCAGCAGCGCCAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RSPLARTAPSAT*EGNCQEQQRQA Trigger: CGCTTGGCGCTGCTGCTCCTGGCAGTTACCTTCGCAGGTAGCGCTCGGAGCGGTCCTGGCGAGCGGGGACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000504762.1 ENST00000506738.6 ENST00000616980.1 ENST00000618802.3 ENST00000631082.1 |
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| CDS CCA 72 bp | TATACTGAGAGCAGTTTGGATATCTGGCAGGTCCTCTaGGGAACCGCCAGTAACGGGCGCGCGGGTACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: YTESSLDIWQVL*GTASNGRAGTV Trigger: GACGGTACCCGCGCGCCCGTTACTGGCGGTTCCCCAGAGGACCTGCCAGATATCCAAACTGCTCTCAGTATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000631082.1 |
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