RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPHK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176170

Ensembl transcript IDs: ENST00000323374.8, ENST00000392496.3, ENST00000545180.5, ENST00000587167.1, ENST00000588682.5, ENST00000590379.5, ENST00000590959.5, ENST00000591651.5, ENST00000591762.1, ENST00000592299.6

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCCAGTCGGTCCGGTTTaGTGGGGAGGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGPVGPV*WGGATA
Trigger: GGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGACCGGCGTCATTCCCTaGGGCGGCTGGACCCCTCGG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGTGVIP*GGWTPR
Trigger: CCGAGGGGTCCAGCCGCCGCAGGGAATGACGCCGGT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGTCGGCCGCGGTAGGTaGGCAGGGCTGCCAGACGCA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGVGRGR*AGLPDA
Trigger: TGCGTCTGGCAGCCCTGCGCACCTACCGCGGCCGAC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAGAGCTGAGGTCCGGTaGCTCCGAGGGCGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPRAEVR*LRGRPR
Trigger: GCGGGGGCGCCCTCGGAGGCACCGGACCTCAGCTCT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392496.3
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCCGGGGGCCGCCCGCTaGATCCATAACCTCGACCCG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGPGAAR*IHNLDP
Trigger: CGGGTCGAGGTTATGGATCCAGCGGGCGGCCCCCGG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCTGGGGCTTCCAGCTaGGCGGGGGCTCCACGCAAC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGAGASS*AGAPRN
Trigger: GTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGCGGTGGCATCTGCTaGGGCTTCCAGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGGGIC*GFQLGG
Trigger: CCCGCCCAGCTGGAAGCCCCAGCAGATGCCACCGCC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGTTGCCGTGTCCCCTaGCCGGAGCTCCAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGCRVP*PELQSG
Trigger: ACCGCTCTGGAGCTCCGGGCAGGGGACACGGCAACC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGARSRG*RSTGVI
Trigger: AATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCAAGGCCTTGCCCTTaGCGCCGCGCGGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGARPCP*RRAGSA
Trigger: TGCTGAACCCGCGCGGCGGCAAGGGCAAGGCCTTGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAGAGCTGCAAGGCCTTaGCCTTGCCGCCGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGRAARP*PCRRAG
Trigger: ACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGTCGGCCGCGGTAGGTaGGCAGGGCTGCCAGACGCA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPVGRGR*AGLPDA
Trigger: TGCGTCTGGCAGCCCTGCGCACCTACCGCGGCCGAC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGACCGGCGTCATTCCCTaGGGCGGCTGGACCCAGTCG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGTGVIP*GGWTQS
Trigger: CGACTGGGTCCAGCCGCCGCAGGGAATGACGCCGGT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGACTGGAGCGCCCCGCTaGAGCGGACTCCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQTGAPR*SGLPGL
Trigger: GAGGCCGGGGAGTCCGCTCCAGCGGGGCGCTCCAGT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACCACGTCTGAGGGACTaGAGCGCCCCGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPPRLRD*SAPLER
Trigger: CCGCTCCAGCGGGGCGCTCCAGTCCCTCAGACGTGG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGCGCGAAGGCAGGGTaGGCGGCCCTACCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGAKAG*AALPSR
Trigger: CCGACTGGGTAGGGCCGCCCACCCTGCCTTCGCGCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGAGCTCCAGAGCGGTaGGAGCCGCGGCGCGCGCTT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGAPER*EPRRAL
Trigger: AAGCGCGCGCCGCGGCTCCCACCGCTCTGGAGCTCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACCGGGGGCCGCCCGCTaGATCCATAACCTCGACCCG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPPGAAR*IHNLDP
Trigger: CGGGTCGAGGTTATGGATCCAGCGGGCGGCCCCCGG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGACCAGCTCCCGCGCGTaGTTCCGCCGCTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGTSSRA*FRRSVS
Trigger: GCTCACTGAGCGGCGGAACCACGCGCGGGAGCTGGT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCTGGGGCTTCCAGCTaGGCGGGGGCTCCACGCAAC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPAGASS*AGAPRN
Trigger: GTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGAGAGAAGACAGCGCTaGCGGAGTCCGGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGERRQR*RSPGPQ
Trigger: CTGCGGCCCCGGACTCCGCCAGCGCTGTCTTCTCTC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392496.3
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCCCGTCTCCAGACATaGCCACCAGAGCGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGARLQT*PPERPS
Trigger: GCTGGGACGCTCTGGTGGTCATGTCTGGAGACGGGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCAGCAGGTTCATGGGTaGCAGCAGCCGGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGQQVHG*QQPAAQ
Trigger: CTGTGCCGCCGGCTGCTGTCACCCATGAACCTGCTG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGCACCACTGTCCAGTaGGAGGGCACTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGTTVQ*EGTGSS
Trigger: GGAGGAGCCAGTGCCCTCTCACTGGACAGTGGTGCC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCCAGTCGGTCCGGTTTaGTGGGGAGGCGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQPVGPV*WGGATA
Trigger: GGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAACCGGGCCACCAGCTaGCGCCTGCTCTCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPNRATS*RLLSPK
Trigger: CTTGGGCGAGAGCAGGCGGCAGCTGGTGGCCCGGTT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPARSRG*RSTGVI
Trigger: AATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCTCCTTATCGGTGCTaGCCAGGCGGGCGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPAPYRC*PGGRRR
Trigger: CCTGCGACGCCCGCCTGGGCAGCACCGATAAGGAGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTCAGCTCCTTATCGGTaGTGCCCAGGCGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSAPYR*CPGGRR
Trigger: GCGACGCCCGCCTGGGCAGCACCGATAAGGAGCTGA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAGAGCTGCAAGGCCTTaGCCTTGCCGCCGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPRAARP*PCRRAG
Trigger: ACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAAGCTGCCAGCGCGTTaGCAGAGCCTGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGKLPAR*QSLLGG
Trigger: GCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCATCTACCGGGCCCTaGTGGACCACAACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGASTGP*WTTTGE
Trigger: CTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGGTGCACCTGGCCCTaGACGGCCTCGCTAACCATC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGCTWP*TASLTI
Trigger: GATGGTTAGCGAGGCCGTGCAGGGCCAGGTGCACCC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTCTGGCGGTGGCATCTaGTGGGGCTTCCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSGGGI*WGFQLG
Trigger: GCCCAGCTGGAAGCCCCAGCAGATGCCACCGCCAGA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAACCGGCGTCATTCCCTaGGGCGGCTGGACCCAGTCG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPTGVIP*GGWTQS
Trigger: CGACTGGGTCCAGCCGCCGCAGGGAATGACGCCGGT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCCACGTCTGAGGGACTaGAGCGCCCCGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQPRLRD*SAPLER
Trigger: CCGCTCCAGCGGGGCGCTCCAGTCCCTCAGACGTGG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACGCCGTTCCCTACAGTaGCCTGGGGCGGAACGCAGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPRRSLQ*PGAERS
Trigger: GCTGCGTTCCGCCCCAGGCCACTGTAGGGAACGGCG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGTCGGTCCGGTTTGCTaGGGAGGCGCCACCGCCGTT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPVGPVC*GGATAV
Trigger: AACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGAC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCCCAAGCGACAAGTaGCCCAGTTCCCGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQRPSDK*PSSRGP
Trigger: GGGGCCCCGGGAACTGGGCCACTTGTCGCTTGGGCG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCCGGGGGCCGCCCGCTaGATCCATAACCTCGACCCG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQPGAAR*IHNLDP
Trigger: CGGGTCGAGGTTATGGATCCAGCGGGCGGCCCCCGG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAACCAGCTCCCGCGCGTaGTTCCGCCGCTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPTSSRA*FRRSVS
Trigger: GCTCACTGAGCGGCGGAACCACGCGCGGGAGCTGGT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTCTACCGGGCCCTGCTaGACCACAACGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSTGPC*TTTGEA
Trigger: TGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAGAGGCGCAGCAGCATaGCACGAGACACTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGRGAAA*HETLPP
Trigger: GGGCGGGAGTGTCTCGTGCCATGCTGCTGCGCCTCT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCTGGGGCTTCCAGCTaGGCGGGGGCTCCACGCAAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQAGASS*AGAPRN
Trigger: GTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGCGGTGGCATCTGCTaGGGCTTCCAGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGGGIC*GFQLGG
Trigger: CCCGCCCAGCTGGAAGCCCCAGCAGATGCCACCGCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCCCCCACAGGAGCTGTaGACAGGCCCTGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGPPQEL*TGPAAL
Trigger: TAGGGCTGCAGGGCCTGTCCACAGCTCCTGTGGGGG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAGTCAGGCCGCTCCATaGGCCCGTTCACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSQAAP*ARSPPR
Trigger: ACGAGGTGGTGAACGGGCTCATGGAGCGGCCTGACT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACAGCAGGTTCATGGGTaGCAGCAGCCGGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPQQVHG*QQPAAQ
Trigger: CTGTGCCGCCGGCTGCTGTCACCCATGAACCTGCTG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGAAGGTGCCCAGAGTaGAGCGCATCTCCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGRCPE*SASPPD
Trigger: GTCTGGGGGAGATGCGCTTCACTCTGGGCACCTTCC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGCACCACTGTCCAGTaGGAGGGCACTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPGTTVQ*EGTGSS
Trigger: GGAGGAGCCAGTGCCCTCTCACTGGACAGTGGTGCC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACCACCAGCTGCCGCCTaGTCTCGCCCAAGCGACAAG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPPPAAA*SRPSDK
Trigger: CTTGTCGCTTGGGCGAGAGCAGGCGGCAGCTGGTGG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCTGGGAGAGGATCCCTaGCCCAGCCATCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGLGEDP*PSHPGC
Trigger: GCAACCTGGATGGCTGGGGCAGGGATCCTCTCCCAG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQARSRG*RSTGVI
Trigger: AATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCTCCTTATCGGTGCTaGCCAGGCGGGCGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQAPYRC*PGGRRR
Trigger: CCTGCGACGCCCGCCTGGGCAGCACCGATAAGGAGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCATCAGCTCCTTATCGGTaGTGCCCAGGCGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPSAPYR*CPGGRR
Trigger: GCGACGCCCGCCTGGGCAGCACCGATAAGGAGCTGA...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCGTGGCGGCGGCTCCTaGCTTCAGCTCCTTATCGGT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGRGGGS*LQLLIG
Trigger: ACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCAAGGCCTTGCCCTTaGCGCCGCGCGGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQARPCP*RRAGSA
Trigger: TGCTGAACCCGCGCGGCGGCAAGGGCAAGGCCTTGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAGAGCTGCAAGGCCTTaGCCTTGCCGCCGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQRAARP*PCRRAG
Trigger: ACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAAGCTGCCAGCGCGTTaGCAGAGCCTGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPKLPAR*QSLLGG
Trigger: GCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCATCTACCGGGCCCTaGTGGACCACAACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPASTGP*WTTTGE
Trigger: CTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCTGCCCAGGTGCGAGTaGAGCAGTGCCAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGLPRCE*SSARTS
Trigger: GCTAGTCCTGGCACTGCTGCACTCGCACCTGGGCAG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGATGCATGACGCCAGCTaGACAGCGGCCCATGGGTGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGMHDAS*TAAHGC
Trigger: GCACCCATGGGCCGCTGTGCAGCTGGCGTCATGCAT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTGCACCTGGCCCTaGACGGCCTCGCTAACCATC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPGCTWP*TASLTI
Trigger: GATGGTTAGCGAGGCCGTGCAGGGCCAGGTGCACCC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCATCTGGCGGTGGCATCTaGTGGGGCTTCCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPSGGGI*WGFQLG
Trigger: GCCCAGCTGGAAGCCCCAGCAGATGCCACCGCCAGA...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCTGTGGACAGGCCCTaGAGCCCTAGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGAVDRP*SPREGG
Trigger: TCCTCCTTCCCTAGGGCTGCAGGGCCTGTCCACAGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGTCGGTCCGGTTTGCTaGGGAGGCGCCACCGCCGTT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQVGPVC*GGATAV
Trigger: AACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGAC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGACCAGCTCCCGCGCGTaGTTCCGCCGCTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQTSSRA*FRRSVS
Trigger: GCTCACTGAGCGGCGGAACCACGCGCGGGAGCTGGT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGACAGGGGCTTCTGGATaGCGGTCTCCCAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGTGASG*RSPSQA
Trigger: GGCCTGACTGGGAGACCGCCATCCAGAAGCCCCTGT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCATCTACCGGGCCCTGCTaGACCACAACGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPSTGPC*TTTGEA
Trigger: TGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGA...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAGAGGCGCAGCAGCATaGCACGAGACACTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPRGAAA*HETLPP
Trigger: GGGCGGGAGTGTCTCGTGCCATGCTGCTGCGCCTCT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGGCTCTTCTGGCGGTaGCATCTGCTGGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGLFWR*HLLGLP
Trigger: TGGAAGCCCCAGCAGATGCCACCGCCAGAAGAGCCC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACCCCCACAGGAGCTGTaGACAGGCCCTGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPPPQEL*TGPAAL
Trigger: TAGGGCTGCAGGGCCTGTCCACAGCTCCTGTGGGGG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCAGCAGGTTCATGGGTaGCAGCAGCCGGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQQQVHG*QQPAAQ
Trigger: CTGTGCCGCCGGCTGCTGTCACCCATGAACCTGCTG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGCACCACTGTCCAGTaGGAGGGCACTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGTTVQ*EGTGSS
Trigger: GGAGGAGCCAGTGCCCTCTCACTGGACAGTGGTGCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGAAGTCCAGAGAGCTaGGGTCCGGTGCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGSPES*GPVPPR
Trigger: CCTCGGAGGCACCGGACCTCAGCTCTCTGGACTTCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392496.3
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGTCAGCTCCTTATCGGTaGTGCCCAGGCGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQSAPYR*CPGGRR
Trigger: GCGACGCCCGCCTGGGCAGCACCGATAAGGAGCTGA...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACGTGGCGGCGGCTCCTaGCTTCAGCTCCTTATCGGT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPRGGGS*LQLLIG
Trigger: ACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCCGTTCACCACCTCGTaGATCAGCCCGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGPFTTS*ISPSPD
Trigger: GTCTGGAGACGGGCTGATGCACGAGGTGGTGAACGG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCATCTACCGGGCCCTaGTGGACCACAACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQASTGP*WTTTGE
Trigger: CTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCAGTGGCACAAGGTGTaGATCTACCGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGQWHKV*IYRALL
Trigger: CAGCAGGGCCCGGTAGATGCACACCTTGTGCCACTG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACTGCCCAGGTGCGAGTaGAGCAGTGCCAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPLPRCE*SSARTS
Trigger: GCTAGTCCTGGCACTGCTGCACTCGCACCTGGGCAG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAATGCATGACGCCAGCTaGACAGCGGCCCATGGGTGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPMHDAS*TAAHGC
Trigger: GCACCCATGGGCCGCTGTGCAGCTGGCGTCATGCAT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGGTGCACCTGGCCCTaGACGGCCTCGCTAACCATC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGCTWP*TASLTI
Trigger: GATGGTTAGCGAGGCCGTGCAGGGCCAGGTGCACCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGTCTGGCGGTGGCATCTaGTGGGGCTTCCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQSGGGI*WGFQLG
Trigger: GCCCAGCTGGAAGCCCCAGCAGATGCCACCGCCAGA...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCTGTGGACAGGCCCTaGAGCCCTAGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPAVDRP*SPREGG
Trigger: TCCTCCTTCCCTAGGGCTGCAGGGCCTGTCCACAGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCATTCCCTACAGTGGCCTaGGGCGGAACGCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPFPTVA*GGTQLV
Trigger: GACGAGCTGCGTTCCGCCCCAGGCCACTGTAGGGAA...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAACAGGGGCTTCTGGATaGCGGTCTCCCAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPTGASG*RSPSQA
Trigger: GGCCTGACTGGGAGACCGCCATCCAGAAGCCCCTGT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGTTGCCAGAGCCTGCTaGGAGGCTACACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGVARAC*EATQGL
Trigger: AAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAAC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGTCTACCGGGCCCTGCTaGACCACAACGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQSTGPC*TTTGEA
Trigger: TGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGA...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAGAGGCGCAGCAGCATaGCACGAGACACTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQRGAAA*HETLPP
Trigger: GGGCGGGAGTGTCTCGTGCCATGCTGCTGCGCCTCT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCTCTTCTGGCGGTaGCATCTGCTGGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPGLFWR*HLLGLP
Trigger: TGGAAGCCCCAGCAGATGCCACCGCCAGAAGAGCCC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCCCCCACAGGAGCTGTaGACAGGCCCTGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQPPQEL*TGPAAL
Trigger: TAGGGCTGCAGGGCCTGTCCACAGCTCCTGTGGGGG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAGAGCCCTCTCAAGGTaGCGAGCTGCAGCCCTACCC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPRALSR*RAAALP
Trigger: GGGTAGGGCTGCAGCTCGCCACCTTGAGAGGGCTCT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGATTCCCTGCGGCGGCTaGACCTGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGIPCGG*TCSPSY
Trigger: GTAGCTGGGACTACAGGTCCAGCCGCCGCAGGGAAT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAAAAGGGGCTGCACGTaGCTCCGGAAGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGKRGCT*LRKSCK
Trigger: CTTGCAGCTCTTCCGGAGTCACGTGCAGCCCCTTTT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAGTCAGGCCGCTCCATaGGCCCGTTCACCACCTCGT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQSQAAP*ARSPPR
Trigger: ACGAGGTGGTGAACGGGCTCATGGAGCGGCCTGACT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGAAGGTGCCCAGAGTaGAGCGCATCTCCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGRCPE*SASPPD
Trigger: GTCTGGGGGAGATGCGCTTCACTCTGGGCACCTTCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACGTAGAACAGATGCATaGCGCCAGCTGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPRRTDA*RQLHSG
Trigger: GCCGCTGTGCAGCTGGCGTCATGCATCTGTTCTACG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGTGGCGGCGGCTCCTaGCTTCAGCTCCTTATCGGT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQRGGGS*LQLLIG
Trigger: ACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACCGTTCACCACCTCGTaGATCAGCCCGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPPFTTS*ISPSPD
Trigger: GTCTGGAGACGGGCTGATGCACGAGGTGGTGAACGG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGATGGTTCAAGGAAGCTaGCAGCGCGTTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGMVQGS*QRVARA
Trigger: GGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCAT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAGCCCCGAAGCCGTGTaGAGAGACAGCAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSPEAV*RDSRFM
Trigger: CATGAACCTGCTGTCTCTGCACACGGCTTCGGGGCT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACAGTGGCACAAGGTGTaGATCTACCGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPQWHKV*IYRALL
Trigger: CAGCAGGGCCCGGTAGATGCACACCTTGTGCCACTG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCTGCCCAGGTGCGAGTaGAGCAGTGCCAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQLPRCE*SSARTS
Trigger: GCTAGTCCTGGCACTGCTGCACTCGCACCTGGGCAG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGACAGCGGCCCATGGGTaGAGCAAACATCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGTAAHG*SKHLTA
Trigger: GGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTGT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCTGTGGACAGGCCCTaGAGCCCTAGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQAVDRP*SPREGG
Trigger: TCCTCCTTCCCTAGGGCTGCAGGGCCTGTCCACAGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAGGAGCCGGCACCTCTaGACAGGGAGCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQRSRHL*TGSRKA
Trigger: TGCCTTCCTGCTCCCTGTGCAGAGGTGCCGGCTCCT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGACCGGCGTCATTCCCTaGGGCGGCTGGACCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQTGVIP*GGWTCS
Trigger: ACTACAGGTCCAGCCGCCGCAGGGAATGACGCCGGT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACTGGGCACGAAGTTCTaGGAGAGGATCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPLGTKF*ERIPAP
Trigger: TGGGGCAGGGATCCTCTCCCAGAACTTCGTGCCCAG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGACAGGGGCTTCTGGATaGCGGTCTCCCAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQTGASG*RSPSQA
Trigger: GGCCTGACTGGGAGACCGCCATCCAGAAGCCCCTGT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCTACACAGGGGCTTCTaGATGGCGGTCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGLHRGF*MAVSQS
Trigger: TGACTGGGAGACCGCCATCCAGAAGCCCCTGTGTAG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGTTGCCAGAGCCTGCTaGGAGGCTACACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPVARAC*EATQGL
Trigger: AAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAAC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCTGCACAGCGGCCCATaGGTGCAGCAAACATCTCAC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGLHSGP*VQQTSH
Trigger: GTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCACCTTTCCCATCCTTaGGCTCCAAGCGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGHLSHP*APSGRR
Trigger: TCGCCTTCCGCTTGGAGCCCAAGGATGGGAAAGGTG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGGCTCTTCTGGCGGTaGCATCTGCTGGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGLFWR*HLLGLP
Trigger: TGGAAGCCCCAGCAGATGCCACCGCCAGAAGAGCCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGCCCTCTCCCTGCATaGGTGCCCTGGTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGPLPA*VPWFRD
Trigger: GTCTCTGAACCAGGGCACCCATGCAGGGAGAGGGCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGATTCCCTGCGGCGGCTaGACCCAGTCGGTCCGGTTT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQIPCGG*TQSVRF
Trigger: AAACCGGACCGACTGGGTCCAGCCGCCGCAGGGAAT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTCCGCAACCGACCACTaGATCCATAACCTCGACCCG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSATDH*IHNLDP
Trigger: CGGGTCGAGGTTATGGATCCAGTGGTCGGTTGCGGA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590959.5
CDS-3UTR TCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAAAAGGGGCTGCACGTaGCTCCGGAAGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPKRGCT*LRKSCK
Trigger: CTTGCAGCTCTTCCGGAGTCACGTGCAGCCCCTTTT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGTAGAACAGATGCATaGCGCCAGCTGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQRRTDA*RQLHSG
Trigger: GCCGCTGTGCAGCTGGCGTCATGCATCTGTTCTACG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCTCCACGCAACCGCTaGCCATCCAGAAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGAPRNR*PSRSSL
Trigger: CAAACTACTTCTGGATGGTCAGCGGTTGCGTGGAGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAGGGTTGGTTCCTTCTaGGGCTGTGACTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGRVGSF*GCDSVP
Trigger: TGGGACAGAGTCACAGCCTCAGAAGGAACCAACCCT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCCGTTCACCACCTCGTaGATCAGCCCGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQPFTTS*ISPSPD
Trigger: GTCTGGAGACGGGCTGATGCACGAGGTGGTGAACGG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAATGGTTCAAGGAAGCTaGCAGCGCGTTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPMVQGS*QRVARA
Trigger: GGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCAT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAGCCCCGAAGCCGTGTaGAGAGACAGCAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPSPEAV*RDSRFM
Trigger: CATGAACCTGCTGTCTCTGCACACGGCTTCGGGGCT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCAGCAAACATCTCACTaGCCAGGTGCGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGQQTSH*PGASAA
Trigger: TGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACTCTCCCTGCATGGGTaGCCTGGTTCAGAGACCTCA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPLSLHG*PGSETS
Trigger: TGAGGTCTCTGAACCAGGGCACCCATGCAGGGAGAG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCTGAGATCGTCCCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGLRSSH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGGACGATCTCAG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACTACACAGGGGCTTCTaGATGGCGGTCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPLHRGF*MAVSQS
Trigger: TGACTGGGAGACCGCCATCCAGAAGCCCCTGTGTAG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCACTGGCTCCTCCAGTaGCACAAGGTGTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGHWLLQ*HKVCIY
Trigger: GTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACTGCACAGCGGCCCATaGGTGCAGCAAACATCTCAC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPLHSGP*VQQTSH
Trigger: GTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACACCTTTCCCATCCTTaGGCTCCAAGCGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPHLSHP*APSGRR
Trigger: TCGCCTTCCGCTTGGAGCCCAAGGATGGGAAAGGTG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCATCCAGAAGTAGTTTaGGTGCACCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGHPEVV*VHLALH
Trigger: GTGCAGGGCCAGGTGCACCCAAACTACTTCTGGATG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAAAAGGGGCTGCACGTaGCTCCGGAAGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQKRGCT*LRKSCK
Trigger: CTTGCAGCTCTTCCGGAGTCACGTGCAGCCCCTTTT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGAGGTCTTCATTGGTaGCCTGCTCATAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGGLHW*PAHSQH
Trigger: ATGCTGGCTATGAGCAGGTCACCAATGAAGACCTCC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCTCCACGCAACCGCTaGCCATCCAGAAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPAPRNR*PSRSSL
Trigger: CAAACTACTTCTGGATGGTCAGCGGTTGCGTGGAGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGTTCCTTCTGAGGCTGTaGCTCTGTCCCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQFLLRL*LCPRPV
Trigger: CACAGGCCTGGGACAGAGTCACAGCCTCAGAAGGAA...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGATGGTTCAAGGAAGCTaGCAGCGCGTTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQMVQGS*QRVARA
Trigger: GGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCAT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGGCACAGCAATAGCGTaGAGTTGGTCAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGGTAIA*SWSGGL
Trigger: AAGACCTCCTGACCAACTGCACGCTATTGCTGTGCC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAGCCCCGAAGCCGTGTaGAGAGACAGCAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQSPEAV*RDSRFM
Trigger: CATGAACCTGCTGTCTCTGCACACGGCTTCGGGGCT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACAGCAAACATCTCACTaGCCAGGTGCGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPQQTSH*PGASAA
Trigger: TGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGACAGCGGCCCATGGGTaGAGCAAACATCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQTAAHG*SKHLTA
Trigger: GGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTGT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCTCAAGGTGGCGAGCTaGAGCCCTACCCACTCCATT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQLKVAS*SPTHSI
Trigger: AATGGAGTGGGTAGGGCTGCAGCTCGCCACCTTGAG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCTACACAGGGGCTTCTaGATGGCGGTCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQLHRGF*MAVSQS
Trigger: TGACTGGGAGACCGCCATCCAGAAGCCCCTGTGTAG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACACTGGCTCCTCCAGTaGCACAAGGTGTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPHWLLQ*HKVCIY
Trigger: GTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCTGCACAGCGGCCCATaGGTGCAGCAAACATCTCAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQLHSGP*VQQTSH
Trigger: GTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCACCTTTCCCATCCTTaGGCTCCAAGCGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQHLSHP*APSGRR
Trigger: TCGCCTTCCGCTTGGAGCCCAAGGATGGGAAAGGTG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACATCCAGAAGTAGTTTaGGTGCACCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPHPEVV*VHLALH
Trigger: GTGCAGGGCCAGGTGCACCCAAACTACTTCTGGATG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCCTGCATGGGTGCCCTaGTTCAGAGACCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQPAWVP*FRDLKG
Trigger: TCCCTTGAGGTCTCTGAACCAGGGCACCCATGCAGG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTTTGCCGACAGCCTTTaGTCATCCGTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGFADSL*SSVSCC
Trigger: GCAGCAAGACACGGATGACCAAAGGCTGTCGGCAAA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR TCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGAGGTCTTCATTGGTaGCCTGCTCATAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPGGLHW*PAHSQH
Trigger: ATGCTGGCTATGAGCAGGTCACCAATGAAGACCTCC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCTCCACGCAACCGCTaGCCATCCAGAAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQAPRNR*PSRSSL
Trigger: CAAACTACTTCTGGATGGTCAGCGGTTGCGTGGAGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGCTGCAATTCAGGGTaGTTCTCTTCAGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPGCNSG*FSSEPS
Trigger: AGAGGGCTCTGAAGAGAATCACCCTGAATTGCAGCC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGAGGTTGTGGTGAGCTaGGATCGTCCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQEVVVS*DRPIAL
Trigger: GAGTGCAATGGGACGATCTCAGCTCACCACAACCTC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGCACAGCAATAGCGTaGAGTTGGTCAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPGTAIA*SWSGGL
Trigger: AAGACCTCCTGACCAACTGCACGCTATTGCTGTGCC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCAGCAAACATCTCACTaGCCAGGTGCGAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQQQTSH*PGASAA
Trigger: TGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCATTCATACTCCATATaGCTGCCCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGHSYSI*LPFSMA
Trigger: GGCCATGGAGAAGGGCAGGCATATGGAGTATGAATG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGCAATAGCGTGCAGTTaGTCAGGAGGTCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGAIACS*SGGLHW
Trigger: CCAATGAAGACCTCCTGACCAACTGCACGCTATTGC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCACTGGCTCCTCCAGTaGCACAAGGTGTGCATCTAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQHWLLQ*HKVCIY
Trigger: GTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCATCCAGAAGTAGTTTaGGTGCACCTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQHPEVV*VHLALH
Trigger: GTGCAGGGCCAGGTGCACCCAAACTACTTCTGGATG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCATCCCAAAAGGAAAGCTaGGAACCAGGAAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPSQKES*EPGSRS
Trigger: GCTCCTGCTTCCTGGTTCCCAGCTTTCCTTTTGGGA...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGAGGTCTTCATTGGTaGCCTGCTCATAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGGLHW*PAHSQH
Trigger: ATGCTGGCTATGAGCAGGTCACCAATGAAGACCTCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAACTTGAGCGGACATTaGTGGGCACGAAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQNLSGH*WARSSG
Trigger: CCCAGAACTTCGTGCCCAGCAATGTCCGCTCAAGTT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGAGGGGAGTCCAGCTaGGTAAAAATCCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPGGESS*VKIPEL
Trigger: AAGTTCTGGGATTTTTACGCAGCTGGACTCCCCTCC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGGCACAGCAATAGCGTaGAGTTGGTCAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQGTAIA*SWSGGL
Trigger: AAGACCTCCTGACCAACTGCACGCTATTGCTGTGCC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACATTCATACTCCATATaGCTGCCCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPHSYSI*LPFSMA
Trigger: GGCCATGGAGAAGGGCAGGCATATGGAGTATGAATG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCAATTCCCCATCCACTaGAAACACACCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGQFPIH*KHTFPI
Trigger: GATGGGAAAGGTGTGTTTGCAGTGGATGGGGAATTG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTTTGTCTCAGCTGCCTaGCCAGCATCTATAGGCATT +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGFVSAA*PASIGI
Trigger: AATGCCTATAGATGCTGGGCAGGCAGCTGAGACAAA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCATCCATTTGTCTCAGCTaGCTGCCCAGCATCTATAGG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPSICLS*LPSIYR
Trigger: CCTATAGATGCTGGGCAGGCAGCTGAGACAAATGGA...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGTTGAGCGGACATTGCTaGGCACGAAGTTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQLSGHC*ARSSGR
Trigger: TCTCCCAGAACTTCGTGCCCAGCAATGTCCGCTCAA...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCAATAGCGTGCAGTTaGTCAGGAGGTCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPAIACS*SGGLHW
Trigger: CCAATGAAGACCTCCTGACCAACTGCACGCTATTGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR TCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAAAAATCCCAGAACTTaGGCGGACATTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQKNPRT*ADIAGH
Trigger: GTGCCCAGCAATGTCCGCTCAAGTTCTGGGATTTTT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCATTCATACTCCATATaGCTGCCCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQHSYSI*LPFSMA
Trigger: GGCCATGGAGAAGGGCAGGCATATGGAGTATGAATG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR GCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACAATTCCCCATCCACTaGAAACACACCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPQFPIH*KHTFPI
Trigger: GATGGGAAAGGTGTGTTTGCAGTGGATGGGGAATTG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGCAATAGCGTGCAGTTaGTCAGGAGGTCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQAIACS*SGGLHW
Trigger: CCAATGAAGACCTCCTGACCAACTGCACGCTATTGC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CCA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACACAGTTTTGGAGGTTaGGAAGTCTACGATCACGGT +
Preference number: 4 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPHSFGG*EVYDHG
Trigger: ACCGTGATCGTAGACTTCCCAACCTCCAAAACTGTG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CCA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGACTGTCTCACAGTTTTaGAGGTTGGGAAGTCTACGA +
Preference number: 4 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGTVSQF*RLGSLR
Trigger: TCGTAGACTTCCCAACCTCCAAAACTGTGAGACAGT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR GCA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCAATTCCCCATCCACTaGAAACACACCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQQFPIH*KHTFPI
Trigger: GATGGGAAAGGTGTGTTTGCAGTGGATGGGGAATTG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS CCA 90 bp CGCGCTTCTCAGGGCCCCGCTCCGTTGCGACGCGCGCGGCGCTCGTaGGAGCCGCTCCCGGGTCGCGCCAAAGCCAAGCCCGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: RASQGPAPLRRARRS*EPLPGRAKAKPEPG
Trigger: GCCCGGTTCGGGCTTGGCTTTGGCGCGACCCGGGAGCGGCTCCCACGAGCGCCGCGCGCGTCGCAACGGAGCGGGGCCCTGAGAAGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS CCA 90 bp CGTCGCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTaGCTGCAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCCC +
Preference number: 5 (lower is better)
Translates to: RRRAGCGARLPRPEP*LQEHRRHSLRRLDP
Trigger: GGGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGCGACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 90 bp GGGGGTCCCTGGCGCTGTGGGGGCGCTGCCCGTGGCGGCGGCTCCTaGCTTCAGCTCCTTATCGGTGCTGCCCAGGCGGGCGTCGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGPWRCGGAARGGGS*LQLLIGAAQAGVAG
Trigger: CCCTGCGACGCCCGCCTGGGCAGCACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACGGGCAGCGCCCCCACAGCGCCAGGGACCCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp GCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCCAGTCG +
Preference number: 5 (lower is better)
Translates to: AGPAVGLAFPARSRG*RSTGVIPCGGWTQS
Trigger: CGACTGGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS GCA 90 bp GCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCGAGCCT +
Preference number: 5 (lower is better)
Translates to: AGPAVGLAFPARSRG*RSTGVIPCGGWTEP
Trigger: AGGCTCGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590379.5
CDS CCA 90 bp CGAACCGGGCCACCAGCTGCCGCCTGCTCTCGCCCAAGCGACAAGTaGCCCAGTTCCCGGGGCCCCGCGAGGGCGGGCCGCACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: RTGPPAAACSRPSDK*PSSRGPARAGRTGA
Trigger: GGCTCCTGTGCGGCCCGCCCTCGCGGGGCCCCGGGAACTGGGCCACTTGTCGCTTGGGCGAGAGCAGGCGGCAGCTGGTGGCCCGGTTCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS CCA 90 bp CGTCGCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTaGCTGCAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: RRRAGCGARLPRPEP*LQEHRRHSLRRLDL
Trigger: CAGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGCGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
CDS CCA 90 bp CGGCGGGTGCGCCTTCGCCTTGCGCGGCCCCCGGGCAGTCCCCGCTaGGTCCAGAGCGTCCCGAGCGCGTTCCGGGAAGGTGACTCAGCG +
Preference number: 5 (lower is better)
Translates to: RRVRLRLARPPGSPR*VQSVPSAFREGDSA
Trigger: CGCTGAGTCACCTTCCCGGAACGCGCTCGGGACGCTCTGGACCCAGCGGGGACTGCCCGGGGGCCGCGCAAGGCGAAGGCGCACCCGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 90 bp CGTCGCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTaGCTGCAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCTC +
Preference number: 5 (lower is better)
Translates to: RRRAGCGARLPRPEP*LQEHRRHSLRRLDL
Trigger: GAGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGCGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 90 bp CGTCGCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTaGCTGCAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCCA +
Preference number: 5 (lower is better)
Translates to: RRRAGCGARLPRPEP*LQEHRRHSLRRLDP
Trigger: TGGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGCGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS CCA 90 bp CGTCGCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTaGCTGCAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCGA +
Preference number: 5 (lower is better)
Translates to: RRRAGCGARLPRPEP*LQEHRRHSLRRLDR
Trigger: TCGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGCGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590379.5
CDS CCA 90 bp CGTCGCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTaGCTGCAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCAG +
Preference number: 5 (lower is better)
Translates to: RRRAGCGARLPRPEP*LQEHRRHSLRRLDQ
Trigger: CTGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGCGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591651.5
CDS GCA 90 bp GCGGCGCGAAGGCAGGGTGGGCGGCCCTACCCAGTCGGTCCGGTTTaGTGGGGAGGCGCCACCGCCGTTCCCTACAGTGGCCTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: AARRQGGRPYPVGPV*WGGATAVPYSGLGR
Trigger: CCGCCCCAGGCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTAGGGCCGCCCACCCTGCCTTCGCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 90 bp CGCTGCCCGTGGCGGCGGCTCCTGCCTTCAGCTCCTTATCGGTGCTaGCCAGGCGGGCGTCGCAGGGCCGGCTGTGGGGCTCGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RCPWRRLLPSAPYRC*PGGRRRAGCGARLP
Trigger: GGGAAGGCGAGCCCCACAGCCGGCCCTGCGACGCCCGCCTGGGCAGCACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACGGGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp GGGCGCTGCCCGTGGCGGCGGCTCCTGCCTTCAGCTCCTTATCGGTaGTGCCCAGGCGGGCGTCGCAGGGCCGGCTGTGGGGCTCGCCTT +
Preference number: 5 (lower is better)
Translates to: GRCPWRRLLPSAPYR*CPGGRRRAGCGARL
Trigger: AAGGCGAGCCCCACAGCCGGCCCTGCGACGCCCGCCTGGGCAGCACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACGGGCAGCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp GCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AGPAVGLAFPARSRG*RSTGVIPCGGWTSL
Trigger: GAGAGAGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS GCA 90 bp CCGCAACCGACCACTGGATCCATAACCTCGACCCGCGGCTCCCGCTaGCAGGGGGTCCCTGGCGCTGTGGGGGCGCTGCCCGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PQPTTGSITSTRGSR*QGVPGAVGALPVAA
Trigger: CGCCGCCACGGGCAGCGCCCCCACAGCGCCAGGGACCCCCTGGCAGCGGGAGCCGCGGGTCGAGGTTATGGATCCAGTGGTCGGTTGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590959.5
CDS GCA 90 bp GCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: AGPAVGLAFPARSRG*RSTGVIPCGGWTRN
Trigger: GTTCCTGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591651.5
CDS CCA 90 bp AGCTCCTTATCGGTGCTGCCCAGGCGGGCGTCGCAGGGCCGGCTGTaGGGCTCGCCTTCCCCGCCCGGAGCCGTGGCTGCAGGAGCACCG +
Preference number: 5 (lower is better)
Translates to: SSLSVLPRRASQGRL*GSPSPPGAVAAGAP
Trigger: CGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGCGACGCCCGCCTGGGCAGCACCGATAAGGAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp GCTCCCGCTGCCAGGGGGTCCCTGGCGCTGTGGGGGCGCTGCCCGTaGCGGCGGCTCCTGCCTTCAGCTCCTTATCGGTGCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: APAARGSLALWGRCP*RRLLPSAPYRCCPG
Trigger: GCCTGGGCAGCACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACGGGCAGCGCCCCCACAGCGCCAGGGACCCCCTGGCAGCGGGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp GGGTCGCGCCAAAGCCAAGCCCGAACCGGGCCACCAGCTGCCGCCTaGTCTCGCCCAAGCGACAAGTGGCCCAGTTCCCGGGGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: GSRQSQARTGPPAAA*SRPSDKWPSSRGPA
Trigger: CGCGGGGCCCCGGGAACTGGGCCACTTGTCGCTTGGGCGAGAGCAGGCGGCAGCTGGTGGCCCGGTTCGGGCTTGGCTTTGGCGCGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 90 bp GCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCTGTAGT +
Preference number: 5 (lower is better)
Translates to: AGPAVGLAFPARSRG*RSTGVIPCGGWTCS
Trigger: ACTACAGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 90 bp GCAGGGCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTGGCTaGAGGAGCACCGGCGTCATTCCCTGCGGCGGCTGGACCTGTGAA +
Preference number: 5 (lower is better)
Translates to: AGPAVGLAFPARSRG*RSTGVIPCGGWTCE
Trigger: TTCACAGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS CCA 90 bp TGGATCCATAACCTCGACCCGCGGCTCCCGCTGCCAGGGGGTCCCTaGCGCTGTGGGGGCGCTGCCCGTGGCGGCGGCTCCTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: WIHNLDPRLPLPGGP*RCGGAARGGGSCLQ
Trigger: CTGAAGGCAGGAGCCGCCGCCACGGGCAGCGCCCCCACAGCGCCAGGGACCCCCTGGCAGCGGGAGCCGCGGGTCGAGGTTATGGATCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp CGCTCCCGGGTCGCGCCAAAGCCAAGCCCGAACCGGGCCACCAGCTaGCGCCTGCTCTCGCCCAAGCGACAAGTGGCCCAGTTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RSRVAPKPSPNRATS*RLLSPKRQVAQFPG
Trigger: CCCCGGGAACTGGGCCACTTGTCGCTTGGGCGAGAGCAGGCGGCAGCTGGTGGCCCGGTTCGGGCTTGGCTTTGGCGCGACCCGGGAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 90 bp AAAGGGGCTGCACGTGACTCCGGAAGAGCTGCAAGGCCTTGCCCTTaGCGCCGCGCGGGTTCAGCAGCACCAGCACGCGGCAGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: KGAARDSGRAARPCP*RRAGSAAPARGRAA
Trigger: CGCGGCCCTGCCGCGTGCTGGTGCTGCTGAACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCTTCCGGAGTCACGTGCAGCCCCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS TCA 90 bp GGCAGGTCCAGGAGGAGCACGCAGCCAATTAGCCGGGCGGCGCCCTaGACTCCGGCACGCCTCCGCGGTGTCTTCTCTTCCGGAGGACCC +
Preference number: 5 (lower is better)
Translates to: GRSRRSTQPISRAAP*TPARLRGVFSSGGP
Trigger: GGGTCCTCCGGAAGAGAAGACACCGCGGAGGCGTGCCGGAGTTCAGGGCGCCGCCCGGCTAATTGGCTGCGTGCTCCTCCTGGACCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 90 bp GCGCGGCCCAGGGGTCATAAGGGCTCTTCTGGCGGTGGCATCTGCTaGGGCTTCCAGCTGGGCGGGGGCTCCACGCAACCGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: ARPRGHKGSSGGGIC*GFQLGGGSTQPLTI
Trigger: GATGGTCAGCGGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGATGCCACCGCCAGAAGAGCCCTTATGACCCCTGGGCCGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS TCA 90 bp CGCGCAGTGCGGTCCTCACCTCGTGCATCAGCCCGTCTCCAGACATaGCCACCAGAGCGTCCCAGCGGCCCAGCTCCTCCGACCGCACCA +
Preference number: 5 (lower is better)
Translates to: RAVRSSPRASARLQT*PPERPSGPAPPTAP
Trigger: TGGTGCGGTCGGAGGAGCTGGGCCGCTGGGACGCTCTGGTGGTCATGTCTGGAGACGGGCTGATGCACGAGGTGAGGACCGCACTGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587167.1
CDS GCA 90 bp CAGCCAAAAGGGGCTGCACGTGACTCCGGAAGAGCTGCAAGGCCTTaGCCTTGCCGCCGCGCGGGTTCAGCAGCACCAGCACGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPKGAARDSGRAARP*PCRRAGSAAPARGR
Trigger: CCTGCCGCGTGCTGGTGCTGCTGAACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCTTCCGGAGTCACGTGCAGCCCCTTTTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp AGTCGGTCCGGTTTGCTGGGGAGGCGCCACCGCCGTTCCCTACAGTaGCCTGGGGCGGAACGCAGCTCGTCCCAAGCTCAGCCCACGTCT +
Preference number: 5 (lower is better)
Translates to: SRSGLLGRRHRRSLQ*PGAERSSSQAQPTS
Trigger: AGACGTGGGCTGAGCTTGGGACGAGCTGCGTTCCGCCCCAGGCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCCCAGTCGGTCCGGTTaGCTGGGGAGGCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGPSRSG*LGRRHR
Trigger: GCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS TCA 90 bp GCATCTGCTGGGGCTTCCAGCTGGGCGGGGGCTCCACGCAACCGCTaGCCATCCAGAAGTAGTTTGGGTGCACCTGGCCCTGCACGGCCT +
Preference number: 5 (lower is better)
Translates to: ASAGASSWAGAPRNR*PSRSSLGAPGPARP
Trigger: AGGCCGTGCAGGGCCAGGTGCACCCAAACTACTTCTGGATGGTCAGCGGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACCCAGTCGGTCCGGTTaGCTGGGGAGGCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPPSRSG*LGRRHR
Trigger: GCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTGCAAGGCCTTGCCCTaGCCGCCGCGCGGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGCKALP*PPRGFS
Trigger: GCTGAACCCGCGCGGCGGCAAGGGCAAGGCCTTGCA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAAGAGCTGCAAGGCCTaGCCCTTGCCGCCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGKSCKA*PLPPRG
Trigger: CCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCTT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS CCA 90 bp CATCTACCGGGCCCTGCTGGACCACAACGGGGGAGGCAGGTGTCTTaGAACCCACTCTTCCTACAGGGAGGTAGGCCAGTCGGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: HLPGPAGPQRGRQVS*NPLFLQGGRPVGRG
Trigger: ACCGCGGCCGACTGGCCTACCTCCCTGTAGGAAGAGTGGGTTCCAAGACACCTGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp CTCGTCGGGCACCACTGTCCAGTGAGAGGGCACTGGCTCCTCCAGTaGCACAAGGTGTGCATCTACCGGGCCCTGCTGGACCACAACGGG +
Preference number: 5 (lower is better)
Translates to: LVGHHCPVRGHWLLQ*HKVCIYRALLDHNG
Trigger: CCCGTTGTGGTCCAGCAGGGCCCGGTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTGCCCTCTCACTGGACAGTGGTGCCCGACGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp GTATCTGGGGATCTGGTGCCTGGTGGATTGCTTGCCGCAGAGCTGTaGCGTCTCCCTGAGGAGGAGGAAGCAGCAGGCCGGGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: VSGDLVPGGLLAAEL*RLPEEEEAAGRAQW
Trigger: CCACTGCGCCCGGCCTGCTGCTTCCTCCTCCTCAGGGAGACGCCACAGCTCTGCGGCAAGCAATCCACCAGGCACCAGATCCCCAGATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS-3UTR CAA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCCCAGTCGGTCCGGTTaGCTGGGGAGGCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQPSRSG*LGRRHR
Trigger: GCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGAAGCTGCCAGCGCGTaGCCAGAGCCTGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGEAASA*PEPAGR
Trigger: CCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS GCA 90 bp CACTGTCCAGTGAGAGGGCACTGGCTCCTCCAGTGGCACAAGGTGTaGATCTACCGGGCCCTGCTGGACCACAACGGGGGAGGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: HCPVRGHWLLQWHKV*IYRALLDHNGGGRC
Trigger: ACACCTGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTGCCCTCTCACTGGACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp GCTGGGCGGGGGCTCCACGCAACCGCTGACCATCCAGAAGTAGTTTaGGTGCACCTGGCCCTGCACGGCCTCGCTAACCATCAATTCCCC +
Preference number: 5 (lower is better)
Translates to: AGRGLHATADHPEVV*VHLALHGLANHQFP
Trigger: GGGGAATTGATGGTTAGCGAGGCCGTGCAGGGCCAGGTGCACCCAAACTACTTCTGGATGGTCAGCGGTTGCGTGGAGCCCCCGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS-3UTR CAA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAAGAGCTGCAAGGCCTaGCCCTTGCCGCCGCGCGGG +
Preference number: 5 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQKSCKA*PLPPRG
Trigger: CCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCTT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGAAGCTGCCAGCGCGTaGCCAGAGCCTGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPEAASA*PEPAGR
Trigger: CCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS TCA 90 bp CGCGGTAGGTGCGCAGGGCTGCCAGACGCAGGAAGGTGCCCAGAGTaGAGCGCATCTCCCCCAGACGCCGATACTTCTCACTCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: RGRCAGLPDAGRCPE*SASPPDADTSHSLG
Trigger: ACCTAGAGAGTGAGAAGTATCGGCGTCTGGGGGAGATGCGCTTCACTCTGGGCACCTTCCTGCGTCTGGCAGCCCTGCGCACCTACCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp GGCACTGGCTCCTCCAGTGGCACAAGGTGTGCATCTACCGGGCCCTaGTGGACCACAACGGGGGAGGCAGGTGTCTTGGAACCCACTCTT +
Preference number: 5 (lower is better)
Translates to: GTGSSSGTRCASTGP*WTTTGEAGVLEPTL
Trigger: AAGAGTGGGTTCCAAGACACCTGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp GCTGCACAGCGGCCCATGGGTGCAGCAAACATCTCACTGCCCAGGTaGGAGTGCAGCAGTGCCAGGACTAGCACAAAGTCCTCGTCGGGC +
Preference number: 5 (lower is better)
Translates to: AAQRPMGAANISLPR*ECSSARTSTKSSSG
Trigger: GCCCGACGAGGACTTTGTGCTAGTCCTGGCACTGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS-3UTR CAA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGGAAGCTGCCAGCGCGTaGCCAGAGCCTGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQEAASA*PEPAGR
Trigger: CCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTC...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS TCA 90 bp GCAGCATGGCACGAGACACTCCCGCCCGCACGTAGAACAGATGCATaGCGCCAGCTGCACAGCGGCCCATGGGTGCAGCAAACATCTCAC +
Preference number: 5 (lower is better)
Translates to: AAWHETLPPARRTDA*RQLHSGPWVQQTSH
Trigger: GTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAGCTGGCGTCATGCATCTGTTCTACGTGCGGGCGGGAGTGTCTCGTGCCATGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp GCCAGCATAATGGTTCAAGGAAGCTGCCAGCGCGTTGCCAGAGCCTaGTGGGAGGCTACACAGGGGCTTCTGGATGGCGGTCTCCCAGTC +
Preference number: 5 (lower is better)
Translates to: ASIMVQGSCQRVARA*WEATQGLLDGGLPV
Trigger: GACTGGGAGACCGCCATCCAGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp CAGCGGCCCATGGGTGCAGCAAACATCTCACTGCCCAGGTGCGAGTaGAGCAGTGCCAGGACTAGCACAAAGTCCTCGTCGGGCACCACT +
Preference number: 5 (lower is better)
Translates to: QRPMGAANISLPRCE*SSARTSTKSSSGTT
Trigger: AGTGGTGCCCGACGAGGACTTTGTGCTAGTCCTGGCACTGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp ACGAGACACTCCCGCCCGCACGTAGAACAGATGCATGACGCCAGCTaGACAGCGGCCCATGGGTGCAGCAAACATCTCACTGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TRHSRPHVEQMHDAS*TAAHGCSKHLTAQV
Trigger: CACCTGGGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAGCTGGCGTCATGCATCTGTTCTACGTGCGGGCGGGAGTGTCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp CCCAGCATAATGGTTCAAGGAAGCTGCCAGCGCGTTGCCAGAGCCTaGTGGGAGGCTACACAGGGGCTTCTGGATGGCGGTCTCCCAGTC +
Preference number: 5 (lower is better)
Translates to: PSIMVQGSCQRVARA*WEATQGLLDGGLPV
Trigger: GACTGGGAGACCGCCATCCAGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587167.1
CDS GCA 90 bp TGGGCTCTCACCCAGCATAATGGTTCAAGGAAGCTGCCAGCGCGTTaGCAGAGCCTGCTGGGAGGCTACACAGGGGCTTCTGGATGGCGG +
Preference number: 5 (lower is better)
Translates to: WALTQHNGSRKLPAR*QSLLGGYTGASGWR
Trigger: CCGCCATCCAGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGGTGAGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587167.1
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCCCTACCCACTCCATTaGTCTCAGCTGCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGPYPLH*SQLPAQ
Trigger: CTGGGCAGGCAGCTGAGACAAATGGAGTGGGTAGGG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 90 bp CCTGCTCATAGCCAGCATAATGGTTCAAGGAAGCTGCCAGCGCGTTaGCAGAGCCTGCTGGGAGGCTACACAGGGGCTTCTGGATGGCGG +
Preference number: 5 (lower is better)
Translates to: PAHSQHNGSRKLPAR*QSLLGGYTGASGWR
Trigger: CCGCCATCCAGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGCTATGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp CACGTAGAACAGATGCATGACGCCAGCTGCACAGCGGCCCATGGGTaGAGCAAACATCTCACTGCCCAGGTGCGAGTGCAGCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: HVEQMHDASCTAAHG*SKHLTAQVRVQQCQ
Trigger: CTGGCACTGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAGCTGGCGTCATGCATCTGTTCTACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp CCTTCTGAGGCTGTGACTCTGTCCCAGGCCTGTGTCCTGGTGGTTTaGCGACAGCCTTTGGTCATCCGTGTCTTGCTGCTGCGTCGTCCC +
Preference number: 5 (lower is better)
Translates to: PSEAVTLSQACVLVV*RQPLVIRVLLLRRP
Trigger: GGGACGACGCAGCAGCAAGACACGGATGACCAAAGGCTGTCGGCAAACCACCAGGACACAGGCCTGGGACAGAGTCACAGCCTCAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 90 bp TTCTCCCTGAAGGGCAGGTATCTGGGGATCTGGTGCCTGGTGGATTaGTTGCCGCAGAGCTGTGGCGTCTCCCTGAGGAGGAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FSLKGRYLGIWCLVD*LPQSCGVSLRRRKQ
Trigger: CTGCTTCCTCCTCCTCAGGGAGACGCCACAGCTCTGCGGCAAGCAATCCACCAGGCACCAGATCCCCAGATACCTGCCCTTCAGGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS GCA 90 bp TACTCTGGCCCTGGGCTCTCACCCAGCATAATGGTTCAAGGAAGCTaGCAGCGCGTTGCCAGAGCCTGCTGGGAGGCTACACAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: YSGPGLSPSIMVQGS*QRVARACWEATQGL
Trigger: AAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGGTGAGAGCCCAGGGCCAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587167.1
CDS CCA 90 bp AGCATAATGGTTCAAGGAAGCTGCCAGCGCGTTGCCAGAGCCTGCTaGGAGGCTACACAGGGGCTTCTGGATGGCGGTCTCCCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SIMVQGSCQRVARAC*EATQGLLDGGLPVR
Trigger: CCTGACTGGGAGACCGCCATCCAGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000587167.1
ENST00000588682.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp GATCGTCCACAGCCCCTTTCGTCCAGCTGGGCGTTCCATCATTCCTaGCGAGGAACAGGAATCCCCCTACAGCCCTTCCCAGCAGGAACC +
Preference number: 5 (lower is better)
Translates to: DRPQPLSSSWAFHHS*RGTGIPLQPFPAGT
Trigger: GGTTCCTGCTGGGAAGGGCTGTAGGGGGATTCCTGTTCCTCGCCAGGAATGATGGAACGCCCAGCTGGACGAAAGGGGCTGTGGACGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 90 bp CCCAGACCCCACGCTGAGAAGCCAAGTCCAGCCAGAGCTCCCCTCTaGGCCTCTCTGTATCCCAGGCTATTTCTCCCTGAAGGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: PRPHAEKPSPARAPL*ASLYPRLFLPEGQV
Trigger: TACCTGCCCTTCAGGGAGAAATAGCCTGGGATACAGAGAGGCCCAGAGGGGAGCTCTGGCTGGACTTGGCTTCTCAGCGTGGGGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAACACCTTTCCCATCCTaGGGCTCCAAGCGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPTPFPS*GSKRKA
Trigger: CGCCTTCCGCTTGGAGCCCAAGGATGGGAAAGGTGT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGCCATCCAGAAGTAGTTaGGGTGCACCTGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGPSRSS*GAPGPA
Trigger: TGCAGGGCCAGGTGCACCCAAACTACTTCTGGATGG...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGCTGAGATCGTCCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPAEIVP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGGACGATCTCAGC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS TCA 90 bp AGTGCCAGGACTAGCACAAAGTCCTCGTCGGGCACCACTGTCCAGTaGGAGGGCACTGGCTCCTCCAGTGGCACAAGGTGTGCATCTACC +
Preference number: 5 (lower is better)
Translates to: SARTSTKSSSGTTVQ*EGTGSSSGTRCAST
Trigger: GGTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTGCCCTCTCACTGGACAGTGGTGCCCGACGAGGACTTTGTGCTAGTCCTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 90 bp CACCTGGCCCTGCACGGCCTCGCTAACCATCAATTCCCCATCCACTaGAAACACACCTTTCCCATCCTTGGGCTCCAAGCGGAAGGCGAC +
Preference number: 5 (lower is better)
Translates to: HLALHGLANHQFPIH*KHTFPILGLQAEGD
Trigger: GTCGCCTTCCGCTTGGAGCCCAAGGATGGGAAAGGTGTGTTTGCAGTGGATGGGGAATTGATGGTTAGCGAGGCCGTGCAGGGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS-3UTR CAA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGACACCTTTCCCATCCTaGGGCTCCAAGCGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQTPFPS*GSKRKA
Trigger: CGCCTTCCGCTTGGAGCCCAAGGATGGGAAAGGTGT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCACCATCCAGAAGTAGTTaGGGTGCACCTGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPPSRSS*GAPGPA
Trigger: TGCAGGGCCAGGTGCACCCAAACTACTTCTGGATGG...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGTTGGTCATCCGTGTCTaGCTGCTGCGTCGTCCCCGT +
Preference number: 5 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQLVIRV*LLRRPR
Trigger: ACGGGGACGACGCAGCAGCAAGACACGGATGACCAA...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAACGGTGTTGGCAGGGTaGGTTCCTTCTGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPTVLAG*VPSEAV
Trigger: CACAGCCTCAGAAGGAACCAACCCTGCCAACACCGT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS TCA 90 bp CAGAGCTCCCCTCTGGGCCTCTCTGTATCCCAGGCTATTTCTCCCTaGAGGGCAGGTATCTGGGGATCTGGTGCCTGGTGGATTGCTTGC +
Preference number: 5 (lower is better)
Translates to: QSSPLGLSVSQAISP*RAGIWGSGAWWIAC
Trigger: GCAAGCAATCCACCAGGCACCAGATCCCCAGATACCTGCCCTTCAGGGAGAAATAGCCTGGGATACAGAGAGGCCCAGAGGGGAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS CCA 90 bp ATACCAAGTAGGGGCATTCATACTCCATATGCCTGCCCTTCTCCATaGCCAGGAAGAGGCGCAGCAGCATGGCACGAGACACTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: IPSRGIHTPYACPSP*PGRGAAAWHETLPP
Trigger: GGGCGGGAGTGTCTCGTGCCATGCTGCTGCGCCTCTTCCTGGCCATGGAGAAGGGCAGGCATATGGAGTATGAATGCCCCTACTTGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp TCTCTGCCTTCACCTTCAGAGGGCCCTCTCCCTGCATGGGTGCCCTaGTTCAGAGACCTCAAGGGAAGAGAAGCCCAACAGCTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: SLPSPSEGPLPAWVP*FRDLKGREAQQLCV
Trigger: GACACACAGCTGTTGGGCTTCTCTTCCCTTGAGGTCTCTGAACCAGGGCACCCATGCAGGGAGAGGGCCCTCTGAAGGTGAAGGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGAACTTGAGCGGACATaGCTGGGCACGAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPELERT*LGTKFW
Trigger: CCAGAACTTCGTGCCCAGCAATGTCCGCTCAAGTTC...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS TCA 90 bp GCGAAACTCCATCTCCAGGCTGCTGACTGTGGCTGCAATTCAGGGTaGTTCTCTTCAGAGCCCTCTCAAGGTGGCGAGCTGCAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: AKLHLQAADCGCNSG*FSSEPSQGGELQPY
Trigger: GTAGGGCTGCAGCTCGCCACCTTGAGAGGGCTCTGAAGAGAATCACCCTGAATTGCAGCCACAGTCAGCAGCCTGGAGATGGAGTTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 90 bp GCAATTCAGGGTGATTCTCTTCAGAGCCCTCTCAAGGTGGCGAGCTaGAGCCCTACCCACTCCATTTGTCTCAGCTGCCTGCCCAGCATC +
Preference number: 5 (lower is better)
Translates to: AIQGDSLQSPLKVAS*SPTHSICLSCLPSI
Trigger: GATGCTGGGCAGGCAGCTGAGACAAATGGAGTGGGTAGGGCTGCAGCTCGCCACCTTGAGAGGGCTCTGAAGAGAATCACCCTGAATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CCA 90 bp CTGTGGCTGCAATTCAGGGTGATTCTCTTCAGAGCCCTCTCAAGGTaGCGAGCTGCAGCCCTACCCACTCCATTTGTCTCAGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LWLQFRVILFRALSR*RAAALPTPFVSAAC
Trigger: GCAGGCAGCTGAGACAAATGGAGTGGGTAGGGCTGCAGCTCGCCACCTTGAGAGGGCTCTGAAGAGAATCACCCTGAATTGCAGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGAGCAATAGCGTGCAGTaGGTCAGGAGGTCTTCATTG +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSNSVQ*VRRSSL
Trigger: CAATGAAGACCTCCTGACCAACTGCACGCTATTGCT...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS-3UTR CAA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCTGTGTCCTGGTGGTTaGCCGACAGCCTTTGGTCAT +
Preference number: 5 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQLCPGG*PTAFGH
Trigger: ATGACCAAAGGCTGTCGGCAAACCACCAGGACACAG...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGTCACAGTTTTGGAGGTaGGGAAGTCTACGATCACGG +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGSQFWR*GSLRSR
Trigger: CCGTGATCGTAGACTTCCCAACCTCCAAAACTGTGA...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS-3UTR CAA 90 bp AGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAGGGGACTGTCTCACAGTTTaGGAGGTTGGGAAGTCTACG +
Preference number: 5 (lower is better)
Translates to: REGGRVLQVDTKAQRGPGDCLTV*EVGKST
Trigger: CGTAGACTTCCCAACCTCCAAAACTGTGAGACAGTC...CCCTGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 90 bp TTCATTGGTGACCTGCTCATAGCCAGCATAATGGTTCAAGGAAGCTaGCAGCGCGTTGCCAGAGCCTGCTGGGAGGCTACACAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: FIGDLLIASIMVQGS*QRVARACWEATQGL
Trigger: AAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGCTATGAGCAGGTCACCAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 90 bp AGGGATAATGTTTCTCCCGATCGTCCACAGCCCCTTTCGTCCAGCTaGGCGTTCCATCATTCCTGGCGAGGAACAGGAATCCCCCTACAG +
Preference number: 5 (lower is better)
Translates to: RDNVSPDRPQPLSSS*AFHHSWRGTGIPLQ
Trigger: CTGTAGGGGGATTCCTGTTCCTCGCCAGGAATGATGGAACGCCCAGCTGGACGAAAGGGGCTGTGGACGATCGGGAGAAACATTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS-3UTR CAA 90 bp CCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGCGCGGCCCAAGCAATAGCGTGCAGTaGGTCAGGAGGTCTTCATTG +
Preference number: 5 (lower is better)
Translates to: PREGGRVLQVDTKAQRGPSNSVQ*VRRSSL
Trigger: CAATGAAGACCTCCTGACCAACTGCACGCTATTGCT...TGGGCCGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS CCA 90 bp GCGGCGGCTGGACCAGGAACCAGCCTTCCACCAAAGAAGCATTTGTaGAGTGAGGCTGGGGTGGAGACATGTTTCTGTAGACTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: AAAGPGTSLPPKKHL*SEAGVETCFCRLCG
Trigger: ACCACAAAGTCTACAGAAACATGTCTCCACCCCAGCCTCACTCCACAAATGCTTCTTTGGTGGAAGGCTGGTTCCTGGTCCAGCCGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591651.5
CDS-3UTR CAA 90 bp CCCTGCAGCCCTAGGGAAGGAGGAAGGGTCCTGCAAGTAGACACTAAGGCACAGAGCAATAGCGTGCAGTaGGTCAGGAGGTCTTCATTG +
Preference number: 5 (lower is better)
Translates to: PCSPREGGRVLQVDTKAQSNSVQ*VRRSSL
Trigger: CAATGAAGACCTCCTGACCAACTGCACGCTATTGCT...CTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGGCTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000592299.6
CDS CCA 90 bp GTGTCCTGGTGGCGTAGACAACAGAAATTGACTGTCTCACAGTTTTaGAGGTTGGGAAGTCTACGATCACGGTGTTGGCAGGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: VSWWRRQQKLTVSQF*RLGSLRSRCWQGWF
Trigger: GAACCAACCCTGCCAACACCGTGATCGTAGACTTCCCAACCTCCAAAACTGTGAGACAGTCAATTTCTGTTGTCTACGCCACCAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CCA 90 bp GAACCAGCCTTCCACCAAAGAAGCATTTGTGGAGTGAGGCTGGGGTaGAGACATGTTTCTGTAGACTTTGTGGTGGTTGGTTTATCCAGC +
Preference number: 5 (lower is better)
Translates to: EPAFHQRSICGVRLG*RHVSVDFVVVGLSS
Trigger: GCTGGATAAACCAACCACCACAAAGTCTACAGAAACATGTCTCCACCCCAGCCTCACTCCACAAATGCTTCTTTGGTGGAAGGCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591651.5
CDS CCA 72 bp CAGGGCCCCGCTCCGTTGCGACGCGCGCGGCGCTCGTaGGAGCCGCTCCCGGGTCGCGCCAAAGCCAAGCCC +
Preference number: 6 (lower is better)
Translates to: QGPAPLRRARRS*EPLPGRAKAKP
Trigger: GGGCTTGGCTTTGGCGCGACCCGGGAGCGGCTCCCACGAGCGCCGCGCGCGTCGCAACGGAGCGGGGCCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 72 bp AGCTCCGCGCGCGTATCGGCGGGTGCGCCTTCGCCTTaGGCGGCCCCCGGGCAGTCCCCGCTGGGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: SSARVSAGAPSP*AAPGQSPLGPE
Trigger: CTCTGGACCCAGCGGGGACTGCCCGGGGGCCGCGCAAGGCGAAGGCGCACCCGCCGATACGCGCGCGGAGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 72 bp GCCGGCTGTGGGGCTCGCCTTCCCCGCCCGGAGCCGTaGCTGCAGGAGCACCGGCGTCATTCCCTGCGGCGG +
Preference number: 6 (lower is better)
Translates to: AGCGARLPRPEP*LQEHRRHSLRR
Trigger: CCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCGGGCGGGGAAGGCGAGCCCCACAGCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp CCCGCTGGATCCATAACCTCGACCCGCGGCTCCCGCTaGCAGGGGGTCCCTGGCGCTGTGGGGGCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PAGSITSTRGSR*QGVPGAVGALP
Trigger: GGGCAGCGCCCCCACAGCGCCAGGGACCCCCTGGCAGCGGGAGCCGCGGGTCGAGGTTATGGATCCAGCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000591651.5
ENST00000592299.6
CDS CCA 72 bp CGCCTTCGCCTTGCGCGGCCCCCGGGCAGTCCCCGCTaGGTCCAGAGCGTCCCGAGCGCGTTCCGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: RLRLARPPGSPR*VQSVPSAFREG
Trigger: ACCTTCCCGGAACGCGCTCGGGACGCTCTGGACCCAGCGGGGACTGCCCGGGGGCCGCGCAAGGCGAAGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS TCA 72 bp GCGCGGGGAGCCAGGTTCCCGGGAAGTCCAGAGAGCTaGGGTCCGGTGCCTCCGAGGGCGCCCCCGCCGTGT +
Preference number: 6 (lower is better)
Translates to: ARGARFPGSPES*GPVPPRAPPPC
Trigger: ACACGGCGGGGGCGCCCTCGGAGGCACCGGACCTCAGCTCTCTGGACTTCCCGGGAACCTGGCTCCCCGCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392496.3
CDS CCA 72 bp GCCAGGGGGTCCCTGGCGCTGTGGGGGCGCTGCCCGTaGCGGCGGCTCCTGCCTTCAGCTCCTTATCGGTGC +
Preference number: 6 (lower is better)
Translates to: ARGSLALWGRCP*RRLLPSAPYRC
Trigger: GCACCGATAAGGAGCTGAAGGCAGGAGCCGCCGCCACGGGCAGCGCCCCCACAGCGCCAGGGACCCCCTGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591651.5
ENST00000591762.1
ENST00000592299.6
CDS CAA 90 bp AGCGGCGCGAAGGCAGGGTGGGCGGCCCTACCCAGTCGGTCCGGTTaGCTGGGGAGGCGCCACCGCCGTTCCCTACAGTGGCCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: SGAKAGWAALPSRSG*LGRRHRRSLQWPGA
Trigger: CGCCCCAGGCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTAGGGCCGCCCACCCTGCCTTCGCGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 72 bp ACCACTGGATCCATAACCTCGACCCGCGGCTCCCGCTaGCAGGGGGTCCCTGGCGCTGTGGGGGCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: TTGSITSTRGSR*QGVPGAVGALP
Trigger: GGGCAGCGCCCCCACAGCGCCAGGGACCCCCTGGCAGCGGGAGCCGCGGGTCGAGGTTATGGATCCAGTGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590959.5
CDS CCA 72 bp GCAGCTCGTCCCAAGCTCAGCCCACGTCTGAGGGACTaGAGCGCCCCGCTGGAGCGGACTCCCCGGCCTCGC +
Preference number: 6 (lower is better)
Translates to: AARPKLSPRLRD*SAPLERTPRPR
Trigger: GCGAGGCCGGGGAGTCCGCTCCAGCGGGGCGCTCCAGTCCCTCAGACGTGGGCTGAGCTTGGGACGAGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS GCA 72 bp AGGCAGGGTGGGCGGCCCTACCCAGTCGGTCCGGTTTaGTGGGGAGGCGCCACCGCCGTTCCCTACAGTGGC +
Preference number: 6 (lower is better)
Translates to: RQGGRPYPVGPV*WGGATAVPYSG
Trigger: GCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTAGGGCCGCCCACCCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 72 bp AAACCTGGATCCATAACCTCGACCCGCGGCTCCCGCTaGCAGGGGGTCCCTGGCGCTGTGGGGGCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: KPGSITSTRGSR*QGVPGAVGALP
Trigger: GGGCAGCGCCCCCACAGCGCCAGGGACCCCCTGGCAGCGGGAGCCGCGGGTCGAGGTTATGGATCCAGGTTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 72 bp GCTGGGGAGGCGCCACCGCCGTTCCCTACAGTGGCCTaGGGCGGAACGCAGCTCGTCCCAAGCTCAGCCCAC +
Preference number: 6 (lower is better)
Translates to: AGEAPPPFPTVA*GGTQLVPSSAH
Trigger: GTGGGCTGAGCTTGGGACGAGCTGCGTTCCGCCCCAGGCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS CCA 72 bp TCCCTGCGGCGGCTGGACCCAGTCGGTCCGGTTTGCTaGGGAGGCGCCACCGCCGTTCCCTACAGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: SLRRLDPVGPVC*GGATAVPYSGL
Trigger: CAGGCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTCCAGCCGCCGCAGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS GCA 72 bp GTCGCGCCAAAGCCAAGCCCGAACCGGGCCACCAGCTaGCGCCTGCTCTCGCCCAAGCGACAAGTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: VAPKPSPNRATS*RLLSPKRQVAQ
Trigger: CTGGGCCACTTGTCGCTTGGGCGAGAGCAGGCGGCAGCTGGTGGCCCGGTTCGGGCTTGGCTTTGGCGCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 72 bp GCACGTGACTCCGGAAGAGCTGCAAGGCCTTGCCCTTaGCGCCGCGCGGGTTCAGCAGCACCAGCACGCGGC +
Preference number: 6 (lower is better)
Translates to: ARDSGRAARPCP*RRAGSAAPARG
Trigger: GCCGCGTGCTGGTGCTGCTGAACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCTTCCGGAGTCACGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp CATTCCCTGCGGCGGCTGGACCCAGTCGGTCCGGTTTaGTGGGGAGGCGCCACCGCCGTTCCCTACAGTGGC +
Preference number: 6 (lower is better)
Translates to: HSLRRLDPVGPV*WGGATAVPYSG
Trigger: GCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTCCAGCCGCCGCAGGGAATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS GCA 72 bp CGGAGCCGTGGCTGCAGGAGCACCGGCGTCATTCCCTaGGGCGGCTGGACCTGTGAACCCAGACCCCACGCT +
Preference number: 6 (lower is better)
Translates to: RSRGCRSTGVIP*GGWTCEPRPHA
Trigger: AGCGTGGGGTCTGGGTTCACAGGTCCAGCCGCCGCAGGGAATGACGCCGGTGCTCCTGCAGCCACGGCTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS CCA 72 bp CGGCCCAGCTCCTCCGACCGCACCAGCTCCCGCGCGTaGTTCCGCCGCTCAGTGAGCATCAGCGTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RPSSSDRTSSRA*FRRSVSISVKE
Trigger: CTCCTTCACGCTGATGCTCACTGAGCGGCGGAACCACGCGCGGGAGCTGGTGCGGTCGGAGGAGCTGGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000587167.1
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CAA 72 bp AAGGCAGGGTGGGCGGCCCTACCCAGTCGGTCCGGTTaGCTGGGGAGGCGCCACCGCCGTTCCCTACAGTGG +
Preference number: 6 (lower is better)
Translates to: KAGWAALPSRSG*LGRRHRRSLQW
Trigger: CCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTAGGGCCGCCCACCCTGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 72 bp CAAAGCCAAGCCCGAACCGGGCCACCAGCTGCCGCCTaGTCTCGCCCAAGCGACAAGTGGCCCAGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: QSQARTGPPAAA*SRPSDKWPSSR
Trigger: CCGGGAACTGGGCCACTTGTCGCTTGGGCGAGAGCAGGCGGCAGCTGGTGGCCCGGTTCGGGCTTGGCTTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS GCA 72 bp GGGGCTGCACGTGACTCCGGAAGAGCTGCAAGGCCTTaGCCTTGCCGCCGCGCGGGTTCAGCAGCACCAGCA +
Preference number: 6 (lower is better)
Translates to: GAARDSGRAARP*PCRRAGSAAPA
Trigger: TGCTGGTGCTGCTGAACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCTTCCGGAGTCACGTGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000587167.1
ENST00000588682.5
ENST00000590379.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 72 bp GGTTTGCTGGGGAGGCGCCACCGCCGTTCCCTACAGTaGCCTGGGGCGGAACGCAGCTCGTCCCAAGCTCAG +
Preference number: 6 (lower is better)
Translates to: GLLGRRHRRSLQ*PGAERSSSQAQ
Trigger: CTGAGCTTGGGACGAGCTGCGTTCCGCCCCAGGCCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323374.8
ENST00000590959.5
ENST00000592299.6
CDS CCA 72 bp CGTTCACCACCTGTTGAAGCACACGTGGCCTCAGCCTaGGACGCACCGCGCCAAGCCCCAGGCCTAGCCGCG +
Preference number: 6 (lower is better)
Translates to: RSPPVEAHVASA*DAPRQAPGLAA
Trigger: CGCGGCTAGGCCTGGGGCTTGGCGCGGTGCGTCCCAGGCTGAGGCCACGTGTGCTTCAACAGGTGGTGAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587167.1
CDS CAA 72 bp TCATTCCCTGCGGCGGCTGGACCCAGTCGGTCCGGTTaGCTGGGGAGGCGCCACCGCCGTTCCCTACAGTGG +
Preference number: 6 (lower is better)
Translates to: SFPAAAGPSRSG*LGRRHRRSLQW
Trigger: CCACTGTAGGGAACGGCGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTCCAGCCGCCGCAGGGAATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590959.5
ENST00000592299.6
CDS TCA 72 bp AGGAGGAGCACGCAGCCAATTAGCCGGGCGGCGCCCTaGACTCCGGCACGCCTCCGCGGTGTCTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RRSTQPISRAAP*TPARLRGVFSS
Trigger: GGAAGAGAAGACACCGCGGAGGCGTGCCGGAGTTCAGGGCGCCGCCCGGCTAATTGGCTGCGTGCTCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 72 bp AGGGGTCATAAGGGCTCTTCTGGCGGTGGCATCTGCTaGGGCTTCCAGCTGGGCGGGGGCTCCACGCAACCG +
Preference number: 6 (lower is better)
Translates to: RGHKGSSGGGIC*GFQLGGGSTQP
Trigger: CGGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGATGCCACCGCCAGAAGAGCCCTTATGACCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS TCA 72 bp CTGGGTCCAGAGCGTCCCGAGCGCGTTCCGGGAAGGTaGCTCAGCGACGCGCTCAGGGGTCGAAAAACTCCG +
Preference number: 6 (lower is better)
Translates to: LGPERPERVPGR*LSDALRGRKTP
Trigger: CGGAGTTTTTCGACCCCTGAGCGCGTCGCTGAGTCACCTTCCCGGAACGCGCTCGGGACGCTCTGGACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 72 bp TTGCCAGAGCCTGCTGGGAGGCTACACAGGGGCTTCTaGATGGCGGTCTCCCAGTCAGGCCGCTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: LPEPAGRLHRGF*MAVSQSGRSMS
Trigger: GCTCATGGAGCGGCCTGACTGGGAGACCGCCATCCAGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000587167.1
ENST00000588682.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 72 bp CCCCTACAGCCCTTCCCAGCAGGAACCCCACAAACCTaGATCCATAACCTCGACCCGCGGCTCCCGCTGCCA +
Preference number: 6 (lower is better)
Translates to: PLQPFPAGTPQT*IHNLDPRLPLP
Trigger: TGGCAGCGGGAGCCGCGGGTCGAGGTTATGGATCCAGGTTTGTGGGGTTCCTGCTGGGAAGGGCTGTAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CCA 72 bp GGCCCTGCTGGACCACAACGGGGGAGGCAGGTGTCTTaGAACCCACTCTTCCTACAGGGAGGTAGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: GPAGPQRGRQVS*NPLFLQGGRPV
Trigger: GACTGGCCTACCTCCCTGTAGGAAGAGTGGGTTCCAAGACACCTGCCTCCCCCGTTGTGGTCCAGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 72 bp CACCACTGTCCAGTGAGAGGGCACTGGCTCCTCCAGTaGCACAAGGTGTGCATCTACCGGGCCCTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: HHCPVRGHWLLQ*HKVCIYRALLD
Trigger: GTCCAGCAGGGCCCGGTAGATGCACACCTTGTGCCACTGGAGGAGCCAGTGCCCTCTCACTGGACAGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CAA 90 bp TCCCTGAAGGGCAGGTATCTGGGGATCTGGTGCCTGGTGGATTGCTaGCCGCAGAGCTGTGGCGTCTCCCTGAGGAGGAGGAAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SLKGRYLGIWCLVDC*PQSCGVSLRRRKQQ
Trigger: CTGCTGCTTCCTCCTCCTCAGGGAGACGCCACAGCTCTGCGGCAAGCAATCCACCAGGCACCAGATCCCCAGATACCTGCCCTTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS GCA 72 bp ATGGTTCAAGGAAGCTGCCAGCGCGTTGCCAGAGCCTaGTGGGAGGCTACACAGGGGCTTCTGGATGGCGGT +
Preference number: 6 (lower is better)
Translates to: MVQGSCQRVARA*WEATQGLLDGG
Trigger: ACCGCCATCCAGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000587167.1
ENST00000588682.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp TCCTCCAGTGGCACAAGGTGTGCATCTACCGGGCCCTaGTGGACCACAACGGGGGAGGCAGGTGTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSGTRCASTGP*WTTTGEAGVLE
Trigger: TTCCAAGACACCTGCCTCCCCCGTTGTGGTCCAGCAGGGCCCGGTAGATGCACACCTTGTGCCACTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp CTGCACAGCGGCCCATGGGTGCAGCAAACATCTCACTaGCCAGGTGCGAGTGCAGCAGTGCCAGGACTAGCA +
Preference number: 6 (lower is better)
Translates to: LHSGPWVQQTSH*PGASAAVPGLA
Trigger: TGCTAGTCCTGGCACTGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp CAGATGCATGACGCCAGCTGCACAGCGGCCCATGGGTaGAGCAAACATCTCACTGCCCAGGTGCGAGTGCAG +
Preference number: 6 (lower is better)
Translates to: QMHDASCTAAHG*SKHLTAQVRVQ
Trigger: CTGCACTCGCACCTGGGCAGTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAGCTGGCGTCATGCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CCA 72 bp GGGCTCCACGCAACCGCTGACCATCCAGAAGTAGTTTaGGTGCACCTGGCCCTGCACGGCCTCGCTAACCAT +
Preference number: 6 (lower is better)
Translates to: GLHATADHPEVV*VHLALHGLANH
Trigger: ATGGTTAGCGAGGCCGTGCAGGGCCAGGTGCACCCAAACTACTTCTGGATGGTCAGCGGTTGCGTGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp TCCCGCCCGCACGTAGAACAGATGCATGACGCCAGCTaGACAGCGGCCCATGGGTGCAGCAAACATCTCACT +
Preference number: 6 (lower is better)
Translates to: SRPHVEQMHDAS*TAAHGCSKHLT
Trigger: AGTGAGATGTTTGCTGCACCCATGGGCCGCTGTGCAGCTGGCGTCATGCATCTGTTCTACGTGCGGGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp CCTGGGCTCTCACCCAGCATAATGGTTCAAGGAAGCTaGCAGCGCGTTGCCAGAGCCTGCTGGGAGGCTACA +
Preference number: 6 (lower is better)
Translates to: PGLSPSIMVQGS*QRVARACWEAT
Trigger: TGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGGTGAGAGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587167.1
CDS CCA 72 bp CCAGAACTTGAGCGGACATTGCTGGGCACGAAGTTCTaGGAGAGGATCCCTGCCCCAGCCATCCAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: PELERTLLGTKF*ERIPAPAIQVA
Trigger: GGCAACCTGGATGGCTGGGGCAGGGATCCTCTCCCAGAACTTCGTGCCCAGCAATGTCCGCTCAAGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS CCA 72 bp CAGCCCCTTTCGTCCAGCTGGGCGTTCCATCATTCCTaGCGAGGAACAGGAATCCCCCTACAGCCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: QPLSSSWAFHHS*RGTGIPLQPFP
Trigger: TGGGAAGGGCTGTAGGGGGATTCCTGTTCCTCGCCAGGAATGATGGAACGCCCAGCTGGACGAAAGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591762.1
CDS CAA 90 bp TTTCTCCCTGAAGGGCAGGTATCTGGGGATCTGGTGCCTGGTGGATaGCTTGCCGCAGAGCTGTGGCGTCTCCCTGAGGAGGAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: FLPEGQVSGDLVPGG*LAAELWRLPEEEEA
Trigger: TGCTTCCTCCTCCTCAGGGAGACGCCACAGCTCTGCGGCAAGCAATCCACCAGGCACCAGATCCCCAGATACCTGCCCTTCAGGGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS GCA 72 bp GCTGTGACTCTGTCCCAGGCCTGTGTCCTGGTGGTTTaGCGACAGCCTTTGGTCATCCGTGTCTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: AVTLSQACVLVV*RQPLVIRVLLL
Trigger: CAGCAGCAAGACACGGATGACCAAAGGCTGTCGGCAAACCACCAGGACACAGGCCTGGGACAGAGTCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 72 bp ACCCAGCATAATGGTTCAAGGAAGCTGCCAGCGCGTTaGCAGAGCCTGCTGGGAGGCTACACAGGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: TQHNGSRKLPAR*QSLLGGYTGAS
Trigger: AGAAGCCCCTGTGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587167.1
CDS CCA 72 bp TCACCTTCAGAGGGCCCTCTCCCTGCATGGGTGCCCTaGTTCAGAGACCTCAAGGGAAGAGAAGCCCAACAG +
Preference number: 6 (lower is better)
Translates to: SPSEGPLPAWVP*FRDLKGREAQQ
Trigger: CTGTTGGGCTTCTCTTCCCTTGAGGTCTCTGAACCAGGGCACCCATGCAGGGAGAGGGCCCTCTGAAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CCA 72 bp GGCTATTTCTCCCTGAAGGGCAGGTATCTGGGGATCTaGTGCCTGGTGGATTGCTTGCCGCAGAGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: GYFSLKGRYLGI*CLVDCLPQSCG
Trigger: GCCACAGCTCTGCGGCAAGCAATCCACCAGGCACCAGATCCCCAGATACCTGCCCTTCAGGGAGAAATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS CAA 72 bp CTGGTGGTTTGCCGACAGCCTTTGGTCATCCGTGTCTaGCTGCTGCGTCGTCCCCGTCTCTGCCTTCACCTT +
Preference number: 6 (lower is better)
Translates to: LVVCRQPLVIRV*LLRRPRLCLHL
Trigger: AAGGTGAAGGCAGAGACGGGGACGACGCAGCAGCAAGACACGGATGACCAAAGGCTGTCGGCAAACCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CAA 72 bp GGCTGTGACTCTGTCCCAGGCCTGTGTCCTGGTGGTTaGCCGACAGCCTTTGGTCATCCGTGTCTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GCDSVPGLCPGG*PTAFGHPCLAA
Trigger: AGCAGCAAGACACGGATGACCAAAGGCTGTCGGCAAACCACCAGGACACAGGCCTGGGACAGAGTCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 72 bp GACCTGCTCATAGCCAGCATAATGGTTCAAGGAAGCTaGCAGCGCGTTGCCAGAGCCTGCTGGGAGGCTACA +
Preference number: 6 (lower is better)
Translates to: DLLIASIMVQGS*QRVARACWEAT
Trigger: TGTAGCCTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAACCATTATGCTGGCTATGAGCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000588682.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp ATGGGTGCAGCAAACATCTCACTGCCCAGGTGCGAGTaGAGCAGTGCCAGGACTAGCACAAAGTCCTCGTCG +
Preference number: 6 (lower is better)
Translates to: MGAANISLPRCE*SSARTSTKSSS
Trigger: CGACGAGGACTTTGTGCTAGTCCTGGCACTGCTGCACTCGCACCTGGGCAGTGAGATGTTTGCTGCACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS GCA 72 bp GGTGATTCTCTTCAGAGCCCTCTCAAGGTGGCGAGCTaGAGCCCTACCCACTCCATTTGTCTCAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: GDSLQSPLKVAS*SPTHSICLSCL
Trigger: CAGGCAGCTGAGACAAATGGAGTGGGTAGGGCTGCAGCTCGCCACCTTGAGAGGGCTCTGAAGAGAATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 72 bp TATTTCTCCCTGAAGGGCAGGTATCTGGGGATCTGGTaGCTGGTGGATTGCTTGCCGCAGAGCTGTGGCGTC +
Preference number: 6 (lower is better)
Translates to: YFSLKGRYLGIW*LVDCLPQSCGV
Trigger: GACGCCACAGCTCTGCGGCAAGCAATCCACCAGGCACCAGATCCCCAGATACCTGCCCTTCAGGGAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588682.5
CDS CAA 72 bp GAGGTTGGGAAGTCTACGATCACGGTGTTGGCAGGGTaGGTTCCTTCTGAGGCTGTGACTCTGTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: EVGKSTITVLAG*VPSEAVTLSQA
Trigger: GGCCTGGGACAGAGTCACAGCCTCAGAAGGAACCAACCCTGCCAACACCGTGATCGTAGACTTCCCAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS TCA 72 bp GGGAGGGGAGTCCAGCTGCGTAAAAATCCCAGAACTTaGGCGGACATTGCTGGGCACGAAGTTCTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: GRGVQLRKNPRT*ADIAGHEVLGE
Trigger: CTCTCCCAGAACTTCGTGCCCAGCAATGTCCGCTCAAGTTCTGGGATTTTTACGCAGCTGGACTCCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS TCA 72 bp CATCTCCAGGCTGCTGACTGTGGCTGCAATTCAGGGTaGTTCTCTTCAGAGCCCTCTCAAGGTGGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: HLQAADCGCNSG*FSSEPSQGGEL
Trigger: CAGCTCGCCACCTTGAGAGGGCTCTGAAGAGAATCACCCTGAATTGCAGCCACAGTCAGCAGCCTGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS GCA 72 bp CTGCACGGCCTCGCTAACCATCAATTCCCCATCCACTaGAAACACACCTTTCCCATCCTTGGGCTCCAAGCG +
Preference number: 6 (lower is better)
Translates to: LHGLANHQFPIH*KHTFPILGLQA
Trigger: CGCTTGGAGCCCAAGGATGGGAAAGGTGTGTTTGCAGTGGATGGGGAATTGATGGTTAGCGAGGCCGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323374.8
ENST00000392496.3
ENST00000545180.5
ENST00000590959.5
ENST00000591762.1
ENST00000592299.6
CDS CAA 90 bp ACAGTTTTGGAGGTTGGGAAGTCTACGATCACGGTGTTGGCAGGGTaGGTTCCTTCTGAGGCTGTGACTCTGTCCCAGGCCTGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: TVLEVGKSTITVLAG*VPSEAVTLSQACVL
Trigger: CAGGACACAGGCCTGGGACAGAGTCACAGCCTCAGAAGGAACCAACCCTGCCAACACCGTGATCGTAGACTTCCCAACCTCCAAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CAA 90 bp GACTGTCTCACAGTTTTGGAGGTTGGGAAGTCTACGATCACGGTGTaGGCAGGGTTGGTTCCTTCTGAGGCTGTGACTCTGTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: DCLTVLEVGKSTITV*AGLVPSEAVTLSQA
Trigger: GGCCTGGGACAGAGTCACAGCCTCAGAAGGAACCAACCCTGCCAACACCGTGATCGTAGACTTCCCAACCTCCAAAACTGTGAGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CAA 72 bp TCCAGCTGCGTAAAAATCCCAGAACTTGAGCGGACATaGCTGGGCACGAAGTTCTGGGAGAGGATCCCTGCC +
Preference number: 6 (lower is better)
Translates to: SSCVKIPELERT*LGTKFWERIPA
Trigger: GGCAGGGATCCTCTCCCAGAACTTCGTGCCCAGCAATGTCCGCTCAAGTTCTGGGATTTTTACGCAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323374.8
CDS CCA 72 bp CAATTCAGGGTGATTCTCTTCAGAGCCCTCTCAAGGTaGCGAGCTGCAGCCCTACCCACTCCATTTGTCTCA +
Preference number: 6 (lower is better)
Translates to: QFRVILFRALSR*RAAALPTPFVS
Trigger: TGAGACAAATGGAGTGGGTAGGGCTGCAGCTCGCCACCTTGAGAGGGCTCTGAAGAGAATCACCCTGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CCA 72 bp GGGGTGGAGACATGTTTCTGTAGACTTTGTGGTGGTTaGTTTATCCAGCAGAAGCCCCTGCATGGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: GVETCFCRLCGG*FIQQKPLHGCP
Trigger: AGGGCACCCATGCAGGGGCTTCTGCTGGATAAACCAACCACCACAAAGTCTACAGAAACATGTCTCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591651.5
CDS GCA 72 bp GCTGCAGCCCTACCCACTCCATTTGTCTCAGCTGCCTaGCCAGCATCTATAGGCATTTGTATTAGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: AAALPTPFVSAA*PASIGICISVL
Trigger: CAGGACACTAATACAAATGCCTATAGATGCTGGGCAGGCAGCTGAGACAAATGGAGTGGGTAGGGCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CCA 72 bp GGACCAGGAACCAGCCTTCCACCAAAGAAGCATTTGTaGAGTGAGGCTGGGGTGGAGACATGTTTCTGTAGA +
Preference number: 6 (lower is better)
Translates to: GPGTSLPPKKHL*SEAGVETCFCR
Trigger: TCTACAGAAACATGTCTCCACCCCAGCCTCACTCCACAAATGCTTCTTTGGTGGAAGGCTGGTTCCTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591651.5
CDS CAA 72 bp ACAGTTTTGGAGGTTGGGAAGTCTACGATCACGGTGTaGGCAGGGTTGGTTCCTTCTGAGGCTGTGACTCTG +
Preference number: 6 (lower is better)
Translates to: TVLEVGKSTITV*AGLVPSEAVTL
Trigger: CAGAGTCACAGCCTCAGAAGGAACCAACCCTGCCAACACCGTGATCGTAGACTTCCCAACCTCCAAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CAA 90 bp TGGTGGCGTAGACAACAGAAATTGACTGTCTCACAGTTTTGGAGGTaGGGAAGTCTACGATCACGGTGTTGGCAGGGTTGGTTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: WWRRQQKLTVSQFWR*GSLRSRCWQGWFLL
Trigger: CAGAAGGAACCAACCCTGCCAACACCGTGATCGTAGACTTCCCAACCTCCAAAACTGTGAGACAGTCAATTTCTGTTGTCTACGCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CCA 72 bp TGGCGTAGACAACAGAAATTGACTGTCTCACAGTTTTaGAGGTTGGGAAGTCTACGATCACGGTGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: WRRQQKLTVSQF*RLGSLRSRCWQ
Trigger: CTGCCAACACCGTGATCGTAGACTTCCCAACCTCCAAAACTGTGAGACAGTCAATTTCTGTTGTCTACGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5
CDS CAA 72 bp TTTGTATTAGTGTCCTGGTGGCGTAGACAACAGAAATaGACTGTCTCACAGTTTTGGAGGTTGGGAAGTCTA +
Preference number: 6 (lower is better)
Translates to: FVLVSWWRRQQK*TVSQFWRLGSL
Trigger: TAGACTTCCCAACCTCCAAAACTGTGAGACAGTCAATTTCTGTTGTCTACGCCACCAGGACACTAATACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545180.5