Pregenerated sensors for SPESP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000258484Ensembl transcript IDs: ENST00000310673.4, ENST00000560188.1, ENST00000561467.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCCTTCGGCACCTCTCCCAACTGGGCTCCGGGAGCTGGTGGCCATaGCGCGACGCCGAAATAGGACGAGCAGCCATGTTTCCCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: CLRHLSQLGSGSWWP*RDAEIGRAAMFPGA Trigger: AGCCCCGGGAAACATGGCTGCTCGTCCTATTTCGGCGTCGCGGCATGGCCACCAGCTCCCGGAGCCCAGTTGGGAGAGGTGCCGAAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560188.1 |
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| CDS CCA 90 bp | CAGTTATGCCTTCGGCACCTCTCCCAACTGGGCTCCGGGAGCTGGTaGCCATGCCGCGACGCCGAAATAGGACGAGCAGCCATGTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: QLCLRHLSQLGSGSW*PCRDAEIGRAAMFP Trigger: GGGAAACATGGCTGCTCGTCCTATTTCGGCGTCGCGGCATGGCCACCAGCTCCCGGAGCCCAGTTGGGAGAGGTGCCGAAGGCATAACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560188.1 |
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| CDS GCA 90 bp | AGAAGGACTAAGGGCTTCATAGGCGTCGTCCGTAGCACTCTGCCATaGGACCGGAACGTCCTGGGGCCACCAGGCTGGGAACCTCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: RRTKGFIGVVRSTLP*DRNVLGPPGWEPQG Trigger: GCCTTGAGGTTCCCAGCCTGGTGGCCCCAGGACGTTCCGGTCGCATGGCAGAGTGCTACGGACGACGCCTATGAAGCCCTTAGTCCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS CCA 90 bp | TCACAGTTATGCCTTCGGCACCTCTCCCAACTGGGCTCCGGGAGCTaGTGGCCATGCCGCGACGCCGAAATAGGACGAGCAGCCATGTTT | + |
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Preference number: 5 (lower is better) Translates to: SQLCLRHLSQLGSGS*WPCRDAEIGRAAMF Trigger: AAACATGGCTGCTCGTCCTATTTCGGCGTCGCGGCATGGCCACCAGCTCCCGGAGCCCAGTTGGGAGAGGTGCCGAAGGCATAACTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560188.1 |
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| CDS CCA 90 bp | CAACATTCTTGGTGCCTCAGTTTGTTTTGCAGCTGGCTCCGGCTCTaGCTCTGGCTCTTCATTTTCAATATAAGGTTCCTCTGCATGCAA | + |
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Preference number: 5 (lower is better) Translates to: QHSWCLSLFCSWLRL*LWLFIFNIRFLCMQ Trigger: TTGCATGCAGAGGAACCTTATATTGAAAATGAAGAGCCAGAGCCAGAGCCGGAGCCAGCTGCAAAACAAACTGAGGCACCAAGAATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310673.4 ENST00000560188.1 |
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| CDS CCA 90 bp | AGTAACAACTGGCAACATTCTTGGTGCCTCAGTTTGTTTTGCAGCTaGCTCCGGCTCTGGCTCTGGCTCTTCATTTTCAATATAAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SNNWQHSWCLSLFCS*LRLWLWLFIFNIRF Trigger: GAACCTTATATTGAAAATGAAGAGCCAGAGCCAGAGCCGGAGCCAGCTGCAAAACAAACTGAGGCACCAAGAATGTTGCCAGTTGTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310673.4 ENST00000560188.1 |
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| CDS TCA 90 bp | TTTCCAAACTCTTCGGGTTTTTCTATCGCAGTTTCACCTGAGAGCTaGGGAACATCTTCTGATTCTGTAGAGATCCCAATGCCAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: FPNSSGFSIAVSPES*GTSSDSVEIPMPVL Trigger: GAGCACTGGCATTGGGATCTCTACAGAATCAGAAGATGTTCCTCAGCTCTCAGGTGAAACTGCGATAGAAAAACCCGAAGAGTTTGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS GCA 90 bp | CTCCGGCTCTGGCTCTGGCTCTTCATTTTCAATATAAGGTTCCTCTaGATGCAAAACAATGGAAACATTGTTTGGTTTGATCGACCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LRLWLWLFIFNIRFL*MQNNGNIVWFDRPE Trigger: TTCTGGTCGATCAAACCAAACAATGTTTCCATTGTTTTGCATGCAGAGGAACCTTATATTGAAAATGAAGAGCCAGAGCCAGAGCCGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310673.4 ENST00000560188.1 ENST00000561467.1 |
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| CDS TCA 90 bp | AATTTATGTTCTGCTGCTGCTGCTAGAGCAAGGCTTCGTTTTAGGTaGTCTTTAGAGGCTTCAATATCTTCTCTATATGCTGGGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: NLCSAAAARARLRFR*SLEASISSLYAGLL Trigger: CAGCAACCCAGCATATAGAGAAGATATTGAAGCCTCTAAAGATCACCTAAAACGAAGCCTTGCTCTAGCAGCAGCAGCAGAACATAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS CCA 72 bp | CTTCGGCACCTCTCCCAACTGGGCTCCGGGAGCTGGTaGCCATGCCGCGACGCCGAAATAGGACGAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LRHLSQLGSGSW*PCRDAEIGRAA Trigger: GGCTGCTCGTCCTATTTCGGCGTCGCGGCATGGCCACCAGCTCCCGGAGCCCAGTTGGGAGAGGTGCCGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560188.1 |
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| CDS CCA 72 bp | CTGCCATGCGACCGGAACGTCCTGGGGCCACCAGGCTaGGAACCTCAAGGCCGAAAGGGAAGGTGTCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: LPCDRNVLGPPG*EPQGRKGRCQR Trigger: CCGCTGACACCTTCCCTTTCGGCCTTGAGGTTCCCAGCCTGGTGGCCCCAGGACGTTCCGGTCGCATGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS CCA 72 bp | TGCCTTCGGCACCTCTCCCAACTGGGCTCCGGGAGCTaGTGGCCATGCCGCGACGCCGAAATAGGACGAGCA | + |
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Preference number: 6 (lower is better) Translates to: CLRHLSQLGSGS*WPCRDAEIGRA Trigger: TGCTCGTCCTATTTCGGCGTCGCGGCATGGCCACCAGCTCCCGGAGCCCAGTTGGGAGAGGTGCCGAAGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560188.1 |
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| CDS CCA 72 bp | AGGTGTCACAGTTATGCCTTCGGCACCTCTCCCAACTaGGCTCCGGGAGCTGGTGGCCATGCCGCGACGCCG | + |
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Preference number: 6 (lower is better) Translates to: RCHSYAFGTSPN*APGAGGHAATP Trigger: CGGCGTCGCGGCATGGCCACCAGCTCCCGGAGCCCAGTTGGGAGAGGTGCCGAAGGCATAACTGTGACACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560188.1 |
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| CDS GCA 72 bp | AAGGGCTTCATAGGCGTCGTCCGTAGCACTCTGCCATaGGACCGGAACGTCCTGGGGCCACCAGGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: KGFIGVVRSTLP*DRNVLGPPGWE Trigger: TTCCCAGCCTGGTGGCCCCAGGACGTTCCGGTCGCATGGCAGAGTGCTACGGACGACGCCTATGAAGCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS CCA 72 bp | TGGTGCCTCAGTTTGTTTTGCAGCTGGCTCCGGCTCTaGCTCTGGCTCTTCATTTTCAATATAAGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: WCLSLFCSWLRL*LWLFIFNIRFL Trigger: GAGGAACCTTATATTGAAAATGAAGAGCCAGAGCCAGAGCCGGAGCCAGCTGCAAAACAAACTGAGGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310673.4 ENST00000560188.1 |
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| CDS CCA 72 bp | TGGCAACATTCTTGGTGCCTCAGTTTGTTTTGCAGCTaGCTCCGGCTCTGGCTCTGGCTCTTCATTTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: WQHSWCLSLFCS*LRLWLWLFIFN Trigger: ATTGAAAATGAAGAGCCAGAGCCAGAGCCGGAGCCAGCTGCAAAACAAACTGAGGCACCAAGAATGTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310673.4 ENST00000560188.1 |
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| CDS TCA 72 bp | ATCAGGTGTCACAGTTATGCCCAGGTGGATATTAGGTaGGTTAGAGTGCCAAAGGACAGGAAAAGGAGATAC | + |
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Preference number: 6 (lower is better) Translates to: IRCHSYAQVDIR*VRVPKDRKRRY Trigger: GTATCTCCTTTTCCTGTCCTTTGGCACTCTAACTCACCTAATATCCACCTGGGCATAACTGTGACACCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561467.1 |
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| CDS TCA 72 bp | TCTTCGGGTTTTTCTATCGCAGTTTCACCTGAGAGCTaGGGAACATCTTCTGATTCTGTAGAGATCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: SSGFSIAVSPES*GTSSDSVEIPM Trigger: CATTGGGATCTCTACAGAATCAGAAGATGTTCCTCAGCTCTCAGGTGAAACTGCGATAGAAAAACCCGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS CCA 72 bp | AGGTTCCTCTGCATGCAAAACAATGGAAACATTGTTTaGTTTGATCGACCAGAATGGGGTACTTTCCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RFLCMQNNGNIV*FDRPEWGTFRV Trigger: CACACGGAAAGTACCCCATTCTGGTCGATCAAACCAAACAATGTTTCCATTGTTTTGCATGCAGAGGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310673.4 ENST00000560188.1 ENST00000561467.1 |
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| CDS TCA 72 bp | TCTGCTGCTGCTGCTAGAGCAAGGCTTCGTTTTAGGTaGTCTTTAGAGGCTTCAATATCTTCTCTATATGCT | + |
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Preference number: 6 (lower is better) Translates to: SAAAARARLRFR*SLEASISSLYA Trigger: AGCATATAGAGAAGATATTGAAGCCTCTAAAGATCACCTAAAACGAAGCCTTGCTCTAGCAGCAGCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS CAA 72 bp | TCTTTAGAGGCTTCAATATCTTCTCTATATGCTGGGTaGCTGGTGTCACTAAGAAGTGCCTGTTGCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLEASISSLYAG*LVSLRSACCTC Trigger: ACAAGTGCAACAGGCACTTCTTAGTGACACCAGCAACCCAGCATATAGAGAAGATATTGAAGCCTCTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS TCA 72 bp | CCTCTGCATGCAAAACAATGGAAACATTGTTTGGTTTaGTCGACCAGAATGGGGTACTTTCCGTGTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: PLHAKQWKHCLV*STRMGYFPCVF Trigger: AAAAACACACGGAAAGTACCCCATTCTGGTCGATCAAACCAAACAATGTTTCCATTGTTTTGCATGCAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310673.4 ENST00000560188.1 ENST00000561467.1 |
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| CDS CAA 72 bp | TCCTCTGCATGCAAAACAATGGAAACATTGTTTGGTTaGATCGACCAGAATGGGGTACTTTCCGTGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSACKTMETLFG*IDQNGVLSVCF Trigger: AAAACACACGGAAAGTACCCCATTCTGGTCGATCAAACCAAACAATGTTTCCATTGTTTTGCATGCAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310673.4 ENST00000560188.1 ENST00000561467.1 |
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| CDS CAA 90 bp | GTGAAGCCTCCTGTAGGGAAAGTTGTAGTTTCTTCACTGATAGGATaGGTTAAAACATCATTCTCAGTTGAAGCGTCTCCATGTGTAACT | + |
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Preference number: 6 (lower is better) Translates to: VKPPVGKVVVSSLIG*VKTSFSVEASPCVT Trigger: AGTTACACATGGAGACGCTTCAACTGAGAATGATGTTTTAACCAATCCTATCAGTGAAGAAACTACAACTTTCCCTACAGGAGGCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310673.4 ENST00000560188.1 ENST00000561467.1 |
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| CDS CAA 90 bp | GAGATCCCAATGCCAGTGCTCTTATCTAAAGTGGTGACAGGTGACTaGTATGAGGTAACATATGGACTTGTAGATGATTCAGTAACAACT | + |
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Preference number: 6 (lower is better) Translates to: EIPMPVLLSKVVTGD*YEVTYGLVDDSVTT Trigger: AGTTGTTACTGAATCATCTACAAGTCCATATGTTACCTCATACAAGTCACCTGTCACCACTTTAGATAAGAGCACTGGCATTGGGATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310673.4 ENST00000560188.1 |
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| CDS CAA 72 bp | CCTGTAGGGAAAGTTGTAGTTTCTTCACTGATAGGATaGGTTAAAACATCATTCTCAGTTGAAGCGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PVGKVVVSSLIG*VKTSFSVEASP Trigger: TGGAGACGCTTCAACTGAGAATGATGTTTTAACCAATCCTATCAGTGAAGAAACTACAACTTTCCCTACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310673.4 ENST00000560188.1 ENST00000561467.1 |
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| CDS CAA 72 bp | ATGCCAGTGCTCTTATCTAAAGTGGTGACAGGTGACTaGTATGAGGTAACATATGGACTTGTAGATGATTCA | + |
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Preference number: 6 (lower is better) Translates to: MPVLLSKVVTGD*YEVTYGLVDDS Trigger: TGAATCATCTACAAGTCCATATGTTACCTCATACAAGTCACCTGTCACCACTTTAGATAAGAGCACTGGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310673.4 ENST00000560188.1 |
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| CDS CAA 90 bp | TTTTATTACTTGTTCGTCCTACTGGCAATAACTGGGACTTATACATaGTTTTTAATTTATGTTCTGCTGCTGCTGCTAGAGCAAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FYYLFVLLAITGTYT*FLIYVLLLLLEQGF Trigger: GAAGCCTTGCTCTAGCAGCAGCAGCAGAACATAAATTAAAAACAATGTATAAGTCCCAGTTATTGCCAGTAGGACGAACAAGTAATAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310673.4 |
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| CDS GCA 72 bp | TGGCTCTGGCTCTTCATTTTCAATATAAGGTTCCTCTaGATGCAAAACAATGGAAACATTGTTTGGTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: WLWLFIFNIRFL*MQNNGNIVWFD Trigger: ATCAAACCAAACAATGTTTCCATTGTTTTGCATGCAGAGGAACCTTATATTGAAAATGAAGAGCCAGAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310673.4 ENST00000560188.1 ENST00000561467.1 |
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