RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPEN (Homo sapiens)

Ensembl gene IDs: ENSG00000065526

Ensembl transcript IDs: ENST00000375759.8, ENST00000438066.1, ENST00000442985.1, ENST00000471538.1, ENST00000487496.1, ENST00000673875.1

Found 910 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCTaGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: EEVWPTEPGGRTANG*PSGSGVCPLRQLLP
Trigger: AGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR TCA 90 bp AACATACAAGGTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTaGGCCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: NIQGSSTTPRGSLAD*AGRQDSKRLAVWQW
Trigger: CCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTACCTTGTATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CCA 90 bp GGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTaGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACT +
Preference number: 1 (lower is better)
Translates to: GSGVCPLRQLLPLLG*VVLCFYCRALGRFT
Trigger: AGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR GCA 90 bp CCAAGGTCTCAGCAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTaGAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGC +
Preference number: 1 (lower is better)
Translates to: PRSQQKFEVLPALRV*NVCLHTPRHPECHS
Trigger: GCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTGCTGAGACCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR TCA 90 bp GAAAACCTTTCTGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTaGATCAAAGACGGTGGCAGCAGGAGAATTAAGGTGACGCATCCA +
Preference number: 1 (lower is better)
Translates to: ENLSVCSSTVNCTSR*IKDGGSRRIKVTHP
Trigger: TGGATGCGTCACCTTAATTCTCCTGCTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACAGAAAGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR TCA 90 bp TCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATaGGTGGGCAATACAAAGTCTGAATATGAAAATAAGATTTCCTCT +
Preference number: 1 (lower is better)
Translates to: SREQDPCCTEAHLYK*VGNTKSEYENKISS
Trigger: AGAGGAAATCTTATTTTCATATTCAGACTTTGTATTGCCCACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CCA 90 bp GGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTaGGCAATACAAAGTCTGAATATGAAAATAAGATTTCCTCTGAAA +
Preference number: 1 (lower is better)
Translates to: GSRTRAVPKRTYTNE*AIQSLNMKIRFPLK
Trigger: TTTCAGAGGAAATCTTATTTTCATATTCAGACTTTGTATTGCCCACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CAA 90 bp GTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGTaGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGG +
Preference number: 2 (lower is better)
Translates to: VESVPFGSFFLCLAG*SFVFTAEPWEDSLR
Trigger: CCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCTGGCCGTCTGGCAGTaGAGTCTGTCCCCTTCGGCA +
Preference number: 2 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLLAVWQ*SLSPSA
Trigger: TGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACTCCTAGAGGAAGTCTaGCCGACTGAGCCGGGCGGC +
Preference number: 2 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTLLEEV*PTEPGG
Trigger: GCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATAGGACAGCAAACGGCTaGCCGTCTGGCAGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHRTANG*PSGSGV
Trigger: GACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCT...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR-3UTR TCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGAGTCCATGGGTTGGTaGTGTGTCCTTGGGCTAAAG +
Preference number: 2 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSESMGW*CVLGLK
Trigger: CTTTAGCCCAAGGACACATCACCAACCCATGGACTC...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGTGTCTGCGAGTCCATaGGTTGGTGATGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSVSASP*VGDVSL
Trigger: CAAGGACACATCACCAACCCATGGACTCGCAGACAC...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGAAACGGCTGGCCGTCTaGCAGTGGAGTCTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLKRLAV*QWSLSP
Trigger: AGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTT...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CAA 90 bp CACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTaGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGG +
Preference number: 2 (lower is better)
Translates to: HIPSSAYPTKRKPFC*LFNCKLYIPVNQRR
Trigger: CCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCATTGGTGATGTGTCCTTaGGCTAAAGCATTATGTAAA +
Preference number: 2 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSLVMCP*AKALCK
Trigger: TTTACATAATGCTTTAGCCCAAGGACACATCACCAA...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CCA 72 bp TGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCTaGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAG +
Preference number: 3 (lower is better)
Translates to: WPTEPGGRTANG*PSGSGVCPLRQ
Trigger: CTGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CCA 72 bp GGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTaGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: GRQDSKRLAVWQ*SLSPSAASSSA
Trigger: AGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CCA 72 bp ACATACAAGGTAGCAGCACCACTCCTAGAGGAAGTCTaGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGC +
Preference number: 3 (lower is better)
Translates to: TYKVAAPLLEEV*PTEPGGRTANG
Trigger: GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTACCTTGTATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR TCA 72 bp AGAGGGGTTAGCCAGTCTTTTTGTACAGGTGCCGTGTaGCACTTCCACATCGCGGGAGCAGGACCCGTGCTG +
Preference number: 3 (lower is better)
Translates to: RGVSQSFCTGAV*HFHIAGAGPVL
Trigger: CAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACACGGCACCTGTACAAAAAGACTGGCTAACCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CCA 72 bp GTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTaGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGA +
Preference number: 3 (lower is better)
Translates to: VCPLRQLLPLLG*VVLCFYCRALG
Trigger: TCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR TCA 72 bp AAACCCAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTaGTGTGTCCTTGGGCTAAAGCATTATGTAAACATA +
Preference number: 3 (lower is better)
Translates to: KPSPGVCESMGW*CVLGLKHYVNI
Trigger: TATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR TCA 72 bp TCTGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTaGATCAAAGACGGTGGCAGCAGGAGAATTAAGGTG +
Preference number: 3 (lower is better)
Translates to: SVCSSTVNCTSR*IKDGGSRRIKV
Trigger: CACCTTAATTCTCCTGCTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR TCA 72 bp CAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATaGGTGGGCAATACAAAGTCTGAATATGAAAATAAG +
Preference number: 3 (lower is better)
Translates to: QDPCCTEAHLYK*VGNTKSEYENK
Trigger: CTTATTTTCATATTCAGACTTTGTATTGCCCACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCTTTCCCGGACCATGCTaGGCGGCGTGCCGGCGACCG +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGFPGPC*AACRRP
Trigger: CGGTCGCCGGCACGCCGCCCAGCATGGTCCGGGAAA...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTGCAGGCACACCAGCTaGGGCTGGCTGCGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLCRHTS*GWLRGA
Trigger: AGCACCCCGCAGCCAGCCCCAGCTGGTGTGCCTGCA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCGTGCTGGGAGGCCAGTaGAGGCACACCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGVLGGQ*RHTSWG
Trigger: GCCCCAGCTGGTGTGCCTGCACTGGCCTCCCAGCAC...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGGCAACCTCTCTGCCTaGGAGGGAGACGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGGNLSA*EGDAPG
Trigger: TCCTGGAGCGTCTCCCTCTCAGGCAGAGAGGTTGCC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGAGGGTGGTGGGGCGTaGGCGTGGACCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWEGGGA*AWTPGW
Trigger: CCAACCTGGGGTCCACGCTCACGCCCCACCACCCTC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGAAGCGGCGGGAAACTaGGTGTGTGTGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGEAAGN*VCVSWA
Trigger: GGCCCAGCTCACACACACTCAGTTTCCCGCCGCTTC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCTCGCAGCTCAGCTCTaGCGCCACCACACACCCGAA +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLLAAQL*RHHTPE
Trigger: TTCGGGTGTGTGGTGGCGGCAGAGCTGAGCTGCGAG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCCAGCTGGGGCTGGCTaGGGGGTGCTGGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWPAGAG*GVLARC
Trigger: ACAGCGTGCCAGCACCCCGCAGCCAGCCCCAGCTGG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCCCTTCCAGCTGCGTTaGCTCCAGCCGCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLPFQLR*LQPHPL
Trigger: CAGAGGATGCGGCTGGAGGCAACGCAGCTGGAAGGG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCCTCATCCACCGGTGCTaGCTGGGGAGGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGLIHRC*LGRWGK
Trigger: CTTCCCCCACCTCCCCAGCCAGCACCGGTGGATGAG...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTCCAGCCGCATCCTCTaGGCGATCCTTAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLSSRIL*AILSGG
Trigger: GCCCCCACTAAGGATCGCCCAGAGGATGCGGCTGGA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGGGCTGCTCGCTGACTaGCGTCACATGTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGGLLAD*RHMWMH
Trigger: GTGCATCCACATGTGACGGCAGTCAGCGAGCAGCCC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGTCTGGGTCCCCTTTaGCTCCTGGGACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLRLGPL*LLGHLR
Trigger: CCTCAAGTGTCCCAGGAGGCAAAGGGGACCCAGACG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTGGTGTGAGGCTCAGGTaGCCTGTTTGCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLGVRLR*PVCRSS
Trigger: GCTGGACCTGCAAACAGGCCACCTGAGCCTCACACC...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCTCTTGGAGGGGAGAGTaGGCTACAGCTTCCACTCCG +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGSWRGE*ATASTP
Trigger: CGGAGTGGAAGCTGTAGCTCACTCTCCCCTCCAAGA...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCTCACTGCAGCTGCCTaGACAGGGGTCTTTGAACGC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLLTAAA*TGVFER
Trigger: GCGTTCAAAGACCCCTGTTCAGGCAGCTGCAGTGAG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCACTCGCAGCGGCATTaGCTGTGCCTGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWHSQRH*LCLGRH
Trigger: ATGCCGCCCCAGGCACAGTCAATGCCGCTGCGAGTG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGGTGACGCATCCAAATaGGCAAGGGAGATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGGDASK*AREMGV
Trigger: CACCCCCATCTCCCTTGCTCATTTGGATGCGTCACC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCATCGGCCTCCTCTCATaGTCTCTGTCCCGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGIGLLS*SLSRSD
Trigger: GTCTGACCGGGACAGAGACCATGAGAGGAGGCCGAT...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGCTCCAGGACTCTGTaGACGTCGCAAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLRSRTL*TSQVNR
Trigger: CCTGTTCACTTGCGACGTCCACAGAGTCCTGGAGCG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCACTGCACAGGGGCTGTaGCTCGAGCGACAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGTAQGL*LERQEG
Trigger: ACCTTCCTGTCGCTCGAGCCACAGCCCCTGTGCAGT...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCCGCTCACCAGACCAGTaGGGGTTTGAGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGRSPDQ*GFEELV
Trigger: AACCAGCTCCTCAAACCCTCACTGGTCTGGTGAGCG...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGTGGACACCGAGAGGTaGATGGGCTCGGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWVDTER*MGSGFS
Trigger: GGAGAAGCCCGAGCCCATTCACCTCTCGGTGTCCAC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGCCGGATGCTGTAGGTaGTACTGGGCAGCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWAGCCR*YWAAWE
Trigger: CTCCCACGCTGCCCAGTATCACCTACAGCATCCGGC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTTCTTTATCGGGGTCTaGTCCTGGGGGCAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLFFIGV*SWGQVY
Trigger: GTAGACCTGCCCCCAGGAGCAGACCCCGATAAAGAA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCTTTCTCAGGGGAGACTaGCACCACCCCAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGFLRGD*HHPRFP
Trigger: AGGGAATCTGGGGTGGTGGCAGTCTCCCCTGAGAAA...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTGCCTGTTTCTGCTTGTaGCCTCTGAACCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLACFCL*PLNLGV
Trigger: CACACCCAGGTTCAGAGGGCACAAGCAGAAACAGGC...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCAGGTGGGGGAAGGTCTaGGGGCACAGATGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGRWGKV*GHRCFG
Trigger: ACCAAAGCATCTGTGCCCCCAGACCTTCCCCCACCT...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTCACCGTGCCTGTTGTaGCCGTTACACCACCAGATG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLSPCLL*PLHHQM
Trigger: CATCTGGTGGTGTAACGGCCACAACAGGCACGGTGA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCACAATCTGCACCCCATaGGTCACCACCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGTICTP*VTTTGG
Trigger: CCCTCCTGTGGTGGTGACCCATGGGGTGCAGATTGT...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCTCTCACTCTTCCTTGTaGCGGGCTTCTCCACGATAC +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGSHSSL*RASPRY
Trigger: GTATCGTGGAGAAGCCCGTCACAAGGAAGAGTGAGA...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACACGTTCACTGGAGTGGTaGGAACATTCACTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTRSLEW*EHSLAP
Trigger: CGGGGCCAGTGAATGTTCTCACCACTCCAGTGAACG...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCCGTACCGGTACTCTTaGAACAGCTCCCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWPYRYS*NSSPLE
Trigger: CTCCAGCGGGGAGCTGTTTCAAGAGTACCGGTACGG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGCCAGGCGGGACAGGTaGCTCTCAGAGAACTCACAG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWARRDR*LSENSQ
Trigger: CTGTGAGTTCTCTGAGAGTCACCTGTCCCGCCTGGC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTGGTTTCCCGGACCATaGTGGGCGGCGTGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEWFPGP*WAACRR
Trigger: TCGCCGGCACGCCGCCCAGCATGGTCCGGGAAACCA...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAACCCCATCTGCAGGCTaGTCAGGCTTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTTPSAG*SGLRCF
Trigger: GAAGCACCTCAAGCCTGAGCAGCCTGCAGATGGGGT...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCCCTCTGGTGCATCTaGCTTATAGGCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTALWCI*LIGSRG
Trigger: GCCTCTGCTGCCTATAAGGCAGATGCACCAGAGGGC...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCCGCGGCCCTGGGCTaGTCGCTGACTGCCGTCACA +
Preference number: 4 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNESAALG*SLTAVT
Trigger: TGTGACGGCAGTCAGCGAGCAGCCCAGGGCCGCGGA...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGCTGGGAGGCGAGGCTaGTCTACTCCCGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLAGRRG*STPVWV
Trigger: GACCCAGACGGGAGTAGAGCAGCCTCGCCTCCCAGC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCCACCCAGAGATGCCTaGTTTCCCGGACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWPPRDA*FPGPCW
Trigger: CCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCTCAGCATCTGCAGTaGCGTCTGGCTTTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTAQHLQ*RLAFRP
Trigger: AGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGC...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATCGCCGGCGTGTCTTTaGAGGCCTTCCCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKASPACL*RPSPPR
Trigger: CCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGA...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCGTCTGGGGGAAGAGCTaGAGATGGAGTAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGVWGKS*RWSRLS
Trigger: GCTCAGTCTACTCCATCTCCAGCTCTTCCCCCAGAC...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCACCGTGGCGTTCACTaGAGTGGTGAGAACATTCAC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLHRGVH*SGENIH
Trigger: GTGAATGTTCTCACCACTCCAGTGAACGCCACGGTG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTCACTGCACTTGCTGTaGCATTCACTGCACTCGCAG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLSLHLL*HSLHSQ
Trigger: CTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTAGAGTGAAGCGCTTCTaGCCGGATGCTGTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLRVKRF*PDAVGD
Trigger: ATCACCTACAGCATCCGGCCAGAAGCGCTTCACTCT...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTGTTTGGGGGCTGGCTaGAATTCAGTGTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLCLGAG*NSVCGR
Trigger: TCTGCCACACACTGAATTCCAGCCAGCCCCCAAACA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCAGATGTTGGAGATGCTaGCAAGGAGGTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGRCWRC*QGGQGP
Trigger: TGGCCCCTGACCTCCTTGCCAGCATCTCCAACATCT...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTACACGCTGTGGGGCCCTaGCCTCTATTTGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLHAVGP*PLFAGA
Trigger: AGCCCCAGCAAATAGAGGTCAGGGCCCCACAGCGTG...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCCTGGGAAGATTCACTaGGGTGATAACCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLPGKIH*GDNHSV
Trigger: CACTGAGTGGTTATCACCTCAGTGAATCTTCCCAGG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCAGCACTCGGGATGGTaGCTGGTTCATTATAATCCG +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLQHSGW*LVHYNP
Trigger: CGGATTATAATGAACCAGGCACCATCCCGAGTGCTG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAATCTACGTTGCTCTCTaGCTGGGAAAACGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTIYVAL*LGKRGP
Trigger: GGGGCCTCGTTTTCCCAGGCAGAGAGCAACGTAGAT...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTGGCTTGAGTGTTTCTaGAGGTTCCTTGGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLWLECF*RFLGLV
Trigger: AACGAGGCCAAGGAACCTGCAGAAACACTCAAGCCA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGAATCTTCCTCAGGGTaGTGGAGCTGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGESSSG*WSWCQH
Trigger: ATGTTGACACCAGCTCCAGCACCCTGAGGAAGATTC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTGGATGGAGGCTGCGATaGTGTGACAGAATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLGWRLR*CDRIRF
Trigger: AAACCTGATTCTGTCACAGCATCGCAGCCTCCATCC...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCCTTTGGATGGAGGCTaGGATGCTGTGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLPLDGG*DAVTES
Trigger: TGATTCTGTCACAGCATCGCAGCCTCCATCCAAAGG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGGCATGATGACAGACTaGTCTGGGTGGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTGMMTD*SGWMLE
Trigger: CTCCAGCATCCACCCAGAGCAGTCTGTCATCATGCC...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGCAACCCCTTCCAGCTaGGTTGCCTCCAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLATPSS*VASSRI
Trigger: GATGCGGCTGGAGGCAACGCAGCTGGAAGGGGTTGC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCCCTCCGAGGGGTGGTaGGAACCGCTGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSPSEGW*EPLQPP
Trigger: AGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCACCTTGAGCTTGGTTaGATTCAGGGACATGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLHLELG*IQGHGS
Trigger: AGAGCCATGTCCCTGAATCCAACCAAGCTCAAGGTG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGAAGGTCAGGCTTCATaGAGACAGACACAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTEGQAS*RQTQGR
Trigger: CCTCCCCTGTGTCTGTCTCCATGAAGCCTGACCTTC...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTCATATCGGGGGTCATaGGCATCAAAGCGATTTGGA +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLSYRGS*ASKRFG
Trigger: TCCAAATCGCTTTGATGCTCATGACCCCCGATATGA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGGCGCCTTGTTCGGCTaGGAGGCAAACTTGGTTCGG +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLGALFG*EANLVR
Trigger: CCGAACCAAGTTTGCCTCTCAGCCGAACAAGGCGCC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACATTCGGTCTTCTGCCCTaGGTAACTCAGGAGCACAAC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTFGLLP*VTQEHN
Trigger: GTTGTGCTCCTGAGTTACTCAGGGCAGAAGACCGAA...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCACACCAGGCCAGTGAGTaGGCTCACCAGACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAHQASE*AHQTSE
Trigger: CTCACTGGTCTGGTGAGCGCACTCACTGGCCTGGTG...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGGAGAGCGCCGTAGATaGAGTACTGCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLGERRR*STAGVA
Trigger: AGCCACCCCAGCAGTACTGCATCTACGGCGCTCTCC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGAGCAGCACTCGGGATaGTGCCTGGTTCATTATAAT +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGEQHSG*CLVHYN
Trigger: ATTATAATGAACCAGGCACCATCCCGAGTGCTGCTC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTAGCATCAAAGCGATTTaGACTTCGACTCCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLSIKAI*TSTPRS
Trigger: GCTTCTCGGAGTCGAAGTCCAAATCGCTTTGATGCT...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCTGTCCACTGCTAACCTaGAGTTTCGAGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGCPLLT*SFEIFL
Trigger: GAGGAAGATCTCGAAACTCCAGGTTAGCAGTGGACA...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCGAATCAGGTTTGACCTaGGACTTGGACACTGACTGC +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGESGLT*DLDTDC
Trigger: GCAGTCAGTGTCCAAGTCCCAGGTCAAACCTGATTC...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGCTTCCACTCCGGTCTaGGGATCGGCTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAASTPV*GSAVKP
Trigger: AGGCTTTACAGCCGATCCTCAGACCGGAGTGGAAGC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACACTTCTGAGCTGGTTTTaGAAGTGGCTGGGTACTGTC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTLLSWF*KWLGTV
Trigger: GACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAG...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGACCGCTGCAGCCTCCTaGAGCTCTCGCTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNETAAAS*SSRSNL
Trigger: GAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGT...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGATCTGTTGGGCCGGCTaGGGGGTCAGGAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEICWAG*GVRSID
Trigger: GTCAATGCTCCTGACCCCTCAGCCGGCCCAACAGAT...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGTTTCGCTTGCGGCGTaGTCGGGTTGTTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAVSLAA*SGCFLA
Trigger: CGCCAGAAAACAACCCGATCACGCCGCAAGCGAAAC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTGGAGATGGAGTAGACTaGGCCCGTGGCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSGDGVD*ARGSSC
Trigger: GCAGGAGGAGCCACGGGCTCAGTCTACTCCATCTCC...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCGTTCACCAGGCCAGTaGGTGCGCTCACCAGACCAG +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSRSPGQ*VRSPDQ
Trigger: CTGGTCTGGTGAGCGCACTCACTGGCCTGGTGAACG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGGGTCCACCACCAGCTaGAGTTTTCTGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLGSTTS*SFLGPW
Trigger: CCAAGGTCCCAGAAAACTGCAGCTGGTGGTGGACCC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTGGGCGGCATTCACTGTaGCCACCGTGGCGTTCACTG +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSGRHSL*PPWRSL
Trigger: CAGTGAACGCCACGGTGGGCACAGTGAATGCCGCCC...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTGCCCTGACCTCTATTTaGTGGGGCTGCAGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSALTSI*WGCSGA
Trigger: GGCTCCGCTGCAGCCCCAGCAAATAGAGGTCAGGGC...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCATTTCTCCAAAGCGCTaGAAGATGTTGCGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGISPKR*KMLRRS
Trigger: TGACCTTCGCAACATCTTCCAGCGCTTTGGAGAAAT...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACACTCAGGAGCAGATTCTaGGGTCTTGGGATGATTCTC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTLRSRF*GLGMIL
Trigger: GAGAATCATCCCAAGACCCCAGAATCTGCTCCTGAG...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAATCGGGGTCTGCTCCTaGGGGCAGGTCTACTTGTTC +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLIGVCS*GQVYLF
Trigger: GAACAAGTAGACCTGCCCCCAGGAGCAGACCCCGAT...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGCAGCTTCGGCTTTCTaGTTTGCATCAGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWAASAF*FASGSA
Trigger: TGCTGAGCCTGATGCAAACCAGAAAGCCGAAGCTGC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCAGCCTTGGGTTCCATaGAGCTCTCTTTCACGCCTA +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWQPWVP*SSLSRL
Trigger: TAGGCGTGAAAGAGAGCTCCATGGAACCCAAGGCTG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGGGAAGAGCTGGAGATaGAGTAGACTGAGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLGKSWR*SRLSPW
Trigger: CCACGGGCTCAGTCTACTCCATCTCCAGCTCTTCCC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGACTGCCGTCACATGTaGATGCACCATGATCCTCAC +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWDCRHM*MHHDPH
Trigger: GTGAGGATCATGGTGCATCCACATGTGACGGCAGTC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGGCAGCCCCTGGAGTTaGTTACTGGGGGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAGSPWS*LLGVTV
Trigger: CACAGTTACCCCCAGTAACCAACTCCAGGGGCTGCC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCTGGCCGTCTGGCAGTaGAGTCTGTCCCCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSLAVWQ*SLSPSA
Trigger: TGCCGAAGGGGACAGACTCCACTGCCAGACGGCCAG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCTTGTTGACCGAGTTGTaGGCTTTCTGTGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGLLTEL*AFCALL
Trigger: CAAAAGTGCACAGAAAGCTCACAACTCGGTCAACAA...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCGTCCTTCTCGTGCATaGAGTGACGGTGGGGGACCA +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSRPSRA*SDGGGP
Trigger: TGGTCCCCCACCGTCACTTCATGCACGAGAAGGACG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGGAAGTCTGGCCGACTaGGCCGGGCGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHGSLAD*AGRQDS
Trigger: GCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCGTTATAGTCGTAGGATaGCCTTCGTTCCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGVIVVG*PSFLSS
Trigger: AGAAGAGAGGAACGAAGGGCATCCTACGACTATAAC...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAAGCACTTACCCCATCTaGAGGCTGCTCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKASTYPI*RLLRLE
Trigger: CTCAAGCCTGAGCAGCCTGCAGATGGGGTAAGTGCT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTGGCTTTTTATCCTTTaGAGCAACTGGAGGATCAAC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLWLFIL*SNWRIN
Trigger: GTTGATCCTCCAGTTGCTGCAAAGGATAAAAAGCCA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAATGTGTTCCACGGCCTaGTCCAGCTCCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAMCSTA*SSSICL
Trigger: CAAGCAGATGGAGCTGGAGCAGGCCGTGGAACACAT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCACTCGCTCTCTGTTTaGACTTTGTTGACGGCGCAA +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWHSLSV*TLLTAQ
Trigger: TTGCGCCGTCAACAAAGTGCAAACAGAGAGCGAGTG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAACTAGTACCTCTGACTaGACAGGGGCTGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKATSTSD*TGAVAR
Trigger: TCGAGCCACAGCCCCTGTGCAGTCAGAGGTACTAGT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAAGTCGGTACTCAGACTaGATGACTAGTACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTSRYSD*MTSTSD
Trigger: GTCAGAGGTACTAGTCATGCAGTCTGAGTACCGACT...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCATAATGCAGAGGCTCTaGGTGAGTGGGATTTGTGTT +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGIMQRL*VSGICV
Trigger: AACACAAATCCCACTCACCCAGAGCCTCTGCATTAT...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCTTTCATGTACCAGGATaGAATAGGTCTTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGFHVPG*NRSWSR
Trigger: TCTGCTCCAAGACCTATTCCATCCTGGTACATGAAA...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCACACCCGCAGGCATCATaGCAGCTTCTTTATCGGGGT +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAHPQAS*QLLYRG
Trigger: ACCCCGATAAAGAAGCTGCCATGATGCCTGCGGGTG...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCACACAGGCATGGACCCTaGGTGGAACCGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAHRHGP*VEPTVF
Trigger: GAAAACAGTCGGTTCCACCCAGGGTCCATGCCTGTG...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACACCAGCTGGGGCTaGCTGCGGGGTGCTGGCACG +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLHTSWG*LRGAGT
Trigger: CGTGCCAGCACCCCGCAGCCAGCCCCAGCTGGTGTG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTGCCAGAGACGAAGTaGAGCTGCACAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKALPETK*SCTAAV
Trigger: CACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAA...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGGTTTGCCTACCTCGTaGACGAGGCTACGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAGLPTS*TRLRLS
Trigger: TGAAAGACGTAGCCTCGTTCACGAGGTAGGCAAACC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCTTGGACACTGACTGCTaGAATTCAATGTCCATTGCA +
Preference number: 4 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGLDTDC*NSMSIA
Trigger: TGCAATGGACATTGAATTTCAGCAGTCAGTGTCCAA...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCCATATCGTTTGAAATaGTCGATGATCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLPYRLK*SMIFSS
Trigger: GGAAGAGAAGATCATCGAGCATTTCAAACGATATGG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGTTCATTATAATCCGTaGGTAGGTCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTVHYNP*VGLCHP
Trigger: TGGGTGACAGAGACCTACGCACGGATTATAATGAAC...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCAACTGGGAAGTGGGTaGAGGGACTGCTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSQLGSG*RDCCRL
Trigger: CAGTCTGCAGCAGTCCCTGCACCCACTTCCCAGTTG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTATTTCCATTTCCATCTaGTGTTTCCTACGACTCTGT +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLISISI*CFLRLC
Trigger: ACAGAGTCGTAGGAAACAGCAGATGGAAATGGAAAT...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGCTCTGGATCTACGTTaGTCTCTGCCTGGGAAAACG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAALDLR*SLPGKT
Trigger: CGTTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCGTTACACCACCAGATaGAGCAGTAACCGCACCCGC +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSRYTTR*SSNRTR
Trigger: GCGGGTGCGGTTACTGCTGCATCTGGTGGTGTAACG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCACGGCCTTTGGCTCATTaGCTTCCTCAGACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKARPLAH*LPQTSE
Trigger: CTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCG...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACATTTCATGGTCACCCATaGTTGCATAGACGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTFHGHP*LHRRSL
Trigger: TAAGGAGCGTCTATGCAACCATGGGTGACCATGAAA...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTTCCCCTCCGAGGGGTaGTGGGAACCGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLFPSEG*WEPLQP
Trigger: AGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTACACCGAGAGGTGAATaGGCTCGGGCTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSTPRGE*ARASPR
Trigger: CCTTGGAGAAGCCCGAGCCCATTCACCTCTCGGTGT...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTGGCCCCGAGGGGACATaGTTGACTTCTGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSGPEGT*LTSVGS
Trigger: ACTGCCTACAGAAGTCAACCATGTCCCCTCGGGGCC...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGGGTGATGCTGTGGGGTaGCATGATGACAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEGDAVG*HDDRLL
Trigger: GAGCAGTCTGTCATCATGCCACCCCACAGCATCACC...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCCTCGGGAGGGTGCTaGGAGGCCAGTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLSSGGC*EASAGT
Trigger: TGTGCCTGCACTGGCCTCCCAGCACCCTCCCGAGGA...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGGATCCTCACATCCCGTaGCACAGTATAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEDPHIP*HSIGVQ
Trigger: CTGCACCCCTATACTGTGCCACGGGATGTGAGGATC...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGGGCCTTGCTGGCTaGTGGCACCTTCACCACCCC +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLRGLAG*WHLHHP
Trigger: GGGGTGGTGAAGGTGCCACCAGCCAGCAAGGCCCCT...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACATACGGGCCTCACCATaGGGGGCAGGAGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHIRASP*GAGAGA
Trigger: TGCCCCTGCTCCTGCCCCTCATGGTGAGGCCCGTAT...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGAATGGAATCAGTTGTaGTGTTTGCTCCCTCAGATG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWEWNQL*CLLPQM
Trigger: CATCTGAGGGAGCAAACAGCACAACTGATTCCATTC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTACAGCTCTGTTTCACTTaGTTGGTGTGCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLQLCFT*LVCRLV
Trigger: GACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTG...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCTGTGGAGGGAATCTTaGTTAGGTCAGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWLWRES*LGQKYM
Trigger: CATGTACTTCTGACCTAAGCAAGATTCCCTCCACAG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCTGCCATTGTCACCGTaGCTGTTGTGGCCGTTACAC +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSLPLSP*LLWPLH
Trigger: GTGTAACGGCCACAACAGGCACGGTGACAATGGCAG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGCTGCTGAGGGGCCTTaGTGGCTGGTGGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLAAEGP*WLVAPS
Trigger: TGAAGGTGCCACCAGCCAGCAAGGCCCCTCAGCAGC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATCGACTACGACGGAGCTaGCGCTGTGGCAGCCGGACG +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHRLRRS*RCGSRT
Trigger: CGTCCGGCTGCCACAGCGCCAGCTCCGTCGTAGTCG...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGGGATGCTTGGATCGCTaGGTGGGGTCACCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLGCLDR*VGSPGH
Trigger: GTGACCCGGTGACCCCACCCAGCGATCCAAGCATCC...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGCGTGGACCCCAGGTTaGCCGGCTGAAGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSAWTPG*PAEGPW
Trigger: CCAAGGTCCTTCAGCCGGCCAACCTGGGGTCCACGC...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATGGCAGAGCAGGAGGGTaGTGGGGCGTGAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHGRAGG*WGVSVD
Trigger: GTCCACGCTCACGCCCCACCACCCTCCTGCTCTGCC...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGTAAGTTTCCCATTCTaGATAAAACTCTCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWVSFPF*IKLSPS
Trigger: CGAGGGAGAGAGTTTTATTCAGAATGGGAAACTTAC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTACACTTCAACATGGCTTaGAAGCCCCTTTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLHFNMA*KPLFLW
Trigger: CCAAAGGAAAAGGGGCTTTCAAGCCATGTTGAAGTG...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAATTTTCTTCACGAGATaGAGAGAGGGATTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTIFFTR*REGFSS
Trigger: AGAGCTAAATCCCTCTCTTCATCTCGTGAAGAAAAT...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACATGGAGTTTTCAGTTCTaGATCTTTATTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTWSFQF*IFILRS
Trigger: GCTCCTGAGAATAAAGATTCAGAACTGAAAACTCCA...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGCCCAGGTTGGCCGGCTaGAGGACCTTGGTCTCGATT +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLPRLAG*RTLVSI
Trigger: AATCGAGACCAAGGTCCTTCAGCCGGCCAACCTGGG...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTCCTTCCCTGGCTGCTaGGGGGCCTTGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHSFPGC*GALLAG
Trigger: ACCAGCCAGCAAGGCCCCTCAGCAGCCAGGGAAGGA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGCAGGAGAATTAAGGTaGCGCATCCAAATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAAGELR*RIQMSK
Trigger: CTTGCTCATTTGGATGCGTCACCTTAATTCTCCTGC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATCTTGGTCCTCTTGCTaGCGAAAGAATACCAGACCA +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLSWSSC*RKNTRP
Trigger: TGGTCTGGTATTCTTTCGGCAGCAAGAGGACCAAGA...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGACTCGGCAACCTCTCTaGCTGAGAGGGAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLTRQPL*LRGRRS
Trigger: GGAGCGTCTCCCTCTCAGGCAGAGAGGTTGCCGAGT...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACCCTTCCTCAGAAGGCTaGAGCGCCTGTGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHPSSEG*SACAPA
Trigger: CGCAGGTGCACAGGCGCTGCAGCCTTCTGAGGAAGG...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGGGCACTGGGATGCCTaGAGCCAGCATGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSGHWDA*SQHDCG
Trigger: GCCACAGTCATGCTGGCTGCAGGCATCCCAGTGCCC...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTGAAAACCTTTCTGTTTaGTCTTCAACTGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLENLSV*SSTVNC
Trigger: ACAGTTTACAGTTGAAGAGCAAACAGAAAGGTTTTC...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCTGGATAGTCCCGCCTaGAATCCTCAGGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSLDSPA*NPQDKC
Trigger: GCACTTATCCTGAGGATTCCAGGCGGGACTATCCAG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTTGGGAGCAATGACTaGAGCCACCTTTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAFGSND*SHLFLV
Trigger: GACAAGGAAAAGGTGGCTCCAGTCATTGCTCCCAAA...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATGGCGCTGATCCGCTGTaGGCCTTCGGTCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHGADPL*AFGLLP
Trigger: GGGCAGAAGACCGAAGGCCCACAGCGGATCAGCGCC...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGGACAGTTCGATCTGCTaGGATGCTGGGCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVDSSIC*DAGPRG
Trigger: CCCTCGGGGCCCAGCATCCCAGCAGATCGAACTGTC...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTGGCCTTGCTGGCTGGTaGCACCTTCACCACCCCATC +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLGLAGW*HLHHPI
Trigger: GATGGGGTGGTGAAGGTGCCACCAGCCAGCAAGGCC...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGGGGTGGGGGCAGCTTTaGCATCTGGTGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLGWGQL*HLVSWQ
Trigger: CTGCCAAGACACCAGATGCCAAAGCTGCCCCCACCC...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGCTGGGCAGGCTGTGTaGACTGCACAGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSAGQAV*TAQAEE
Trigger: CTCCTCAGCCTGTGCAGTCCACACAGCCTGCCCAGC...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTGGCAGAACCAGTCCTaGTGGGGTGCTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLWQNQS*WGAGAR
Trigger: TCTGGCCCCAGCACCCCACCAGGACTGGTTCTGCCA...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAAGGGGCAGGGACCGATaGGCCAGGACGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPRGRDR*ARTLLP
Trigger: TGGCAACAACGTCCTGGCCCATCGGTCCCTGCCCCT...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATCTCCTAGAGGAAGTCTaGCCGACTGAGCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHLLEEV*PTEPGG
Trigger: GCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAG...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CAA 72 bp GTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGTaGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VPFGSFFLCLAG*SFVFTAEPWED
Trigger: ATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCCCTGGGCTGCTCGCTaGCTGCCGTCACATGTGGAT +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQPWAAR*LPSHVD
Trigger: ATCCACATGTGACGGCAGTCAGCGAGCAGCCCAGGG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCAGCTGTGTCATTCTTaGGGGCCAGCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQQLCHS*GPAGPA
Trigger: GGCAGGGCCTGCTGGCCCTCAAGAATGACACAGCTG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTGTACAGGTGCCGTGTaGCACTTCCACATCGCGGGA +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLCTGAV*HFHIAG
Trigger: TCCCGCGATGTGGAAGTGTCACACGGCACCTGTACA...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAAATCCTCAGGATAAGTaGCTGGAGTTCGAACACTCT +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKANPQDK*LEFEHS
Trigger: AGAGTGTTCGAACTCCAGGCACTTATCCTGAGGATT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGGTGTGGGTATGGGGATaGTTGGATCGCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVVWVWG*LDRWVG
Trigger: CCCCACCCAGCGATCCAAGCATCCCCATACCCACAC...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGCTGGAGTGCACAATCTaGACCCCATGGGTCACCACC +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLLECTI*TPWVTT
Trigger: GGTGGTGACCCATGGGGTGCAGATTGTGCACTCCAG...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCACTTGAGGCATCTTGCTaGTTGGTGGCTGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPLEASC*LVAGRA
Trigger: AGCCCGGCCAGCCACCAAGCAGCAAGATGCCTCAAG...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGAACGTTGATGATCCCTaGCGCCTGCTTGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLNVDDP*RLLGLQ
Trigger: CTGCAGGCCAAGCAGGCGGCAGGGATCATCAACGTT...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCGGGAGCAGGACCCGTaGTGTACCGAAGCGCACTTA +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVREQDP*CTEAHL
Trigger: TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGAATGTGATTTCTCTTaGCCTGATTTACGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWECDFS*PDLRSG
Trigger: ACCTGAACGTAAATCAGGCCAAGAGAAATCACATTC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGAATTCCGTTCTCGCTTaGTGCAGATATCAAAATCGA +
Preference number: 4 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWNSVLA*CRYQNR
Trigger: TCGATTTTGATATCTGCACCAAGCGAGAACGGAATT...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGGATGGAATAGGTCTTaGAGCAGAGTCAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLGWNRS*SRVNLF
Trigger: GAAAAGGTTGACTCTGCTCCAAGACCTATTCCATCC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACCGAGGCCCCGGGAGTTaGAGGCTTGGCATCCAGATA +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHRGPGS*RLGIQI
Trigger: TATCTGGATGCCAAGCCTCCAACTCCCGGGGCCTCG...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGACGTTGCTCTCTGCCTaGGAAAACGAGGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVTLLSA*ENEAPG
Trigger: TCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACGT...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGCTCCAATCTCTTTCTaGTCACTCTTGGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLAPISF*SLLVAQ
Trigger: TTGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTTTTCTGCAGGTTCCTTaGCCTCGTTCTCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSFLQVP*PRSPPL
Trigger: AAGAGGAGGAGAACGAGGCCAAGGAACCTGCAGAAA...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGTTTTCTGGGACCTTaGCGACCGCCATCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLSFLGP*RPPSLR
Trigger: CCTGAGGGATGGCGGTCGCCAAGGTCCCAGAAAACT...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGGGTATGGGGATGCTTaGATCGCTGGGTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHGYGDA*IAGWGH
Trigger: GTGACCCCACCCAGCGATCCAAGCATCCCCATACCC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGCGGTCAGTACCAACGTaGAATGGGTGGCCACGTTCG +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLRSVPT*NGWPRS
Trigger: CGAACGTGGCCACCCATTCCACGTTGGTACTGACCG...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCACTCAGGGACACAGTCTaGGTGATGCTGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPLRDTV*VMLWGG
Trigger: GCCACCCCACAGCATCACCCAGACTGTGTCCCTGAG...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGTTTGCAGGTCCAGCTaGGAGGCGAGGCTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHVCRSS*EARLLY
Trigger: GTAGAGCAGCCTCGCCTCCCAGCTGGACCTGCAAAC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAAGGACAGCAAACGGCTaGCCGTCTGGCAGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPRTANG*PSGSGV
Trigger: GACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCT...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTTCTCGTGCATGAAGTaGCGGTGGGGGACCATAAGC +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLFSCMK*RWGTIS
Trigger: GCTTATGGTCCCCCACCGTCACTTCATGCACGAGAA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGGGGACTGCTGCAGACTaGACTGATCGAGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLGTAAD*TDRAGE
Trigger: TTCTCCAGCTCGATCAGTTCAGTCTGCAGCAGTCCC...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTTTCAGTGTGGTCACTaGGCCCTTCACGGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLFQCGH*ALHGAF
Trigger: AAAGGCCCCGTGAAGGGCTCAGTGACCACACTGAAA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGGTGGATGCTGGAGATaGACTGGGGCACTGGGATGC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQGGCWR*TGALGC
Trigger: GCATCCCAGTGCCCCAGTTCATCTCCAGCATCCACC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCGTTCTCGGGTAAGTTaGCCACCCAGAGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLRSRVS*PPRDAW
Trigger: CCAGGCATCTCTGGGTGGGCAACTTACCCGAGAACG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGGTGGTGGGAACCGCTaGAGCCTCCTGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTGGGNR*SLLKLS
Trigger: CGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGGGCAAGGCCCTCTGGTaGATCTGCCTTATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVGKALW*ICLIGS
Trigger: GCTGCCTATAAGGCAGATGCACCAGAGGGCCTTGCC...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGCCCGTGGCTCCTCCTaGCTTGTGATCCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQARGSS*LVIHSV
Trigger: GACAGAGTGGATCACAAGGCAGGAGGAGCCACGGGC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCGGGCCCAGCAGGGGTaGTCACCAAACTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLRAQQG*SPNFSV
Trigger: CACTGAAAAGTTTGGTGAGCACCCCTGCTGGGCCCG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGTCTATTTGCTGGGGCTaGAGCGGAGCCCGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQSICWG*SGARGE
Trigger: CTCTCCTCGGGCTCCGCTGCAGCCCCAGCAAATAGA...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGACACTTGAGGCATCTTaGTGCTTGGTGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVTLEAS*CLVAGR
Trigger: CCGGCCAGCCACCAAGCAGCAAGATGCCTCAAGTGT...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAAGGGCCAGCAGGCCCTaGCACACGATGGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTRASRP*HTMGYF
Trigger: GAAGTACCCCATCGTGTGGCAGGGCCTGCTGGCCCT...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGGGGCCAGGACGTTGTTaGCAGAGACGAAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVGPGRC*QRRSGA
Trigger: AGCTCCACTTCGTCTCTGGCAACAACGTCCTGGCCC...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCCAGCTGCAGTTTTCTaGGACCTTGGCGACCGCCAT +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVPAAVF*DLGDRH
Trigger: ATGGCGGTCGCCAAGGTCCCAGAAAACTGCAGCTGG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCACTCTGGTTCCTTGTCTaGATCAACTGGATCACTTTT +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKALWFLV*INWITF
Trigger: AAAAGTGATCCAGTTGATCCAGACAAGGAACCAGAG...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTATCTGCTTGGCTAACTaGGTGGCTTCTGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLICLAN*VASGDG
Trigger: GCCGTCCCCAGAAGCCACCCAGTTAGCCAAGCAGAT...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATCAACACTGATTTCTTaGGACGAATTCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKASTLIS*DEFSVE
Trigger: CTCCACAGAGAATTCGTCCCAAGAAATCAGTGTTGA...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGCTTGGATCGCTGGGTaGGGTCACCGGGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQAWIAG*GHRVTF
Trigger: GAAAGTGACCCGGTGACCCCACCCAGCGATCCAAGC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGGCATTGACTGTGCCTaGGGCGGCATTCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIGIDCA*GGIHCA
Trigger: GGCACAGTGAATGCCGCCCCAGGCACAGTCAATGCC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATATTCACTGTGCCTCCCTaGGTGACAGGCGTGGACACC +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIFTVPP*VTGVDT
Trigger: GGTGTCCACGCCTGTCACCCAGGGAGGCACAGTGAA...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGATGAACTGGGGCACTaGGATGCCTGCAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPDELGH*DACSQH
Trigger: ATGCTGGCTGCAGGCATCCCAGTGCCCCAGTTCATC...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCTGACCTCTATTTGCTaGGGCTGCAGCGGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQLTSIC*GCSGAR
Trigger: TCGGGCTCCGCTGCAGCCCCAGCAAATAGAGGTCAG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGGCAGCTTCCTTCCCTaGCTGCTGAGGGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTGSFLP*LLRGLA
Trigger: AGCAAGGCCCCTCAGCAGCCAGGGAAGGAAGCTGCC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACCTGAGCAGCTGTCTTaGTCCGGGAAGGCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIPEQLS*SGKAGQ
Trigger: TTGGCCTGCCTTCCCGGACCAAGACAGCTGCTCAGG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACATCTTGCTGCTTGGTaGCTGGCCGGGCTGACCGAG +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGHLAAW*LAGLTE
Trigger: CTCGGTCAGCCCGGCCAGCCACCAAGCAGCAAGATG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCACGTAGGCAGGCTGATTaGAGCCAGGGTTGGGAACGT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPRRQAD*SQGWER
Trigger: ACGTTCCCAACCCTGGCTCCAATCAGCCTGCCTACG...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAAAACGGCTGGCCGTCTaGCAGTGGAGTCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIKRLAV*QWSLSP
Trigger: AGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTT...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAAACCACGCAAGGCATaGGTTCCAGGCGGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLKPRKA*VPGGFS
Trigger: CGAAAAACCGCCTGGAACTCATGCCTTGCGTGGTTT...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGATACTGGCAAGCTCCTaGCAGTCTTTGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVILASS*QSLGLA
Trigger: TGCCAGCCCCAAAGACTGTCAGGAGCTTGCCAGTAT...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTGCAGAGGCTCTGGGTaGGTGGGATTTGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVCRGSG*VGFVFT
Trigger: GGTGAACACAAATCCCACTCACCCAGAGCCTCTGCA...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAAGATCCTACCAGAAATaGAGTCAGAATCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLRSYQK*SQNLPL
Trigger: AAGAGGAAGATTCTGACTTCATTTCTGGTAGGATCT...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGAGGCTTTGCTTCTTCTaGGACGGTAGCTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVRLCFF*DGSWLH
Trigger: GTGGAGCCAGCTACCGTCTCAGAAGAAGCAAAGCCT...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGGCAGGACTCTCACCTTaGGCTTGGTTGGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVAGLSP*AWLDSG
Trigger: CCCTGAATCCAACCAAGCTCAAGGTGAGAGTCCTGC...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAACCCTGAACCTGGCTTaGGGCTCCTCATCCACCGGT +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTTLNLA*GSSSTG
Trigger: ACCGGTGGATGAGGAGCCTCAAGCCAGGTTCAGGGT...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGAGAGGCGACAGGAGGTaGGAGCTTTGCTGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVRGDRR*ELCCSY
Trigger: GTAACTGCAGCAAAGCTCTCACCTCCTGTCGCCTCT...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAAGGACCAGCTGGTTGTaGACCAGCACAGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGRTSWL*TSTGGV
Trigger: CACACCCCCTGTGCTGGTTCACAACCAGCTGGTCCT...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATGCCTCCTGGGACACTTaGGGCATCTTGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHASWDT*GILLLG
Trigger: ACCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGC...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGAGTCCATGGGTTGGTaGTGTGTCCTTGGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLESMGW*CVLGLK
Trigger: CTTTAGCCCAAGGACACATCACCAACCCATGGACTC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGTGGTGACCGACTCCTaGTGTGCTGGTAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHVVTDS*CAGNSA
Trigger: AGCGGAATTACCAGCACAGCAGGAGTCGGTCACCAC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGCCTTGTGGGTCTAGATaGTTGGCTAGCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLPCGSR*LASQSL
Trigger: CAGAGACTGGCTAGCCAAGCATCTAGACCCACAAGG...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACCATCTTGAGGGGGTTTaGCTACCTCGTGAACGAGGC +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHHLEGV*LPRERG
Trigger: GCCTCGTTCACGAGGTAGGCAAACCCCCTCAAGATG...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACTCCACGATACTCACTaGAGCTGCCTGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSLHDTH*SCLNRG
Trigger: ACCCCTGTTCAGGCAGCTGCAGTGAGTATCGTGGAG...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTGCTCCAGCTCCATCTaGTTGGCTAACTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVCSSSI*LANWVA
Trigger: AGCCACCCAGTTAGCCAAGCAGATGGAGCTGGAGCA...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTGCTGTGGCATTCACTaGACTCGCAGCGGCATTGAC +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVCCGIH*TRSGID
Trigger: GTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCA...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCGCTGTGACGGTCACTaGACTTGCTGTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLRCDGH*TCCGIH
Trigger: GTGAATGCCACAGCAAGTGCAGTGACCGTCACAGCG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACGTTCGCATAGCCTaGAGGAGCTTGAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLHVRIA*RSLRAF
Trigger: AAAGGCCCTCAAGCTCCTGCAGGCTATGCGAACGTG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCTGGTAATTCCGCTCTaGCCTTCTGCCTCGTACCTC +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLLVIPL*PSASYL
Trigger: GAGGTACGAGGCAGAAGGCCAGAGCGGAATTACCAG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACGGGAGTTGGAGGCTTaGCATCCAGATAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIRELEA*HPDKAA
Trigger: AGCCGCCTTATCTGGATGCCAAGCCTCCAACTCCCG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCCAGCTCCATCTGCTTaGCTAACTGGGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVPAPSA*LTGWLL
Trigger: CAGAAGCCACCCAGTTAGCCAAGCAGATGGAGCTGG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTGGGGCAAGGCCCTCTaGTGCATCTGCCTTATAGGC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHWGKAL*CICLIG
Trigger: GCCTATAAGGCAGATGCACCAGAGGGCCTTGCCCCA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTAAGGCAGTGTGGGTATaGGGATGCTTGGATCGCTGG +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLKAVWV*GCLDRW
Trigger: CCAGCGATCCAAGCATCCCCATACCCACACTGCCTT...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAAGTAGACTGAGCCCGTaGCTCCTCCTGCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSSRLSP*LLLPCD
Trigger: ATCACAAGGCAGGAGGAGCCACGGGCTCAGTCTACT...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACGTCGATCACAGGCATaGACCCTGGGTGGAACCGAC +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTRRSQA*TLGGTD
Trigger: GTCGGTTCCACCCAGGGTCCATGCCTGTGATCGACG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCATTGAGGGCCTTTGGATaGAGGCTGCGATGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSLRAFG*RLRCCD
Trigger: GTCACAGCATCGCAGCCTCCATCCAAAGGCCCTCAA...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGCAGTACTGCTGGGGTaGCTTGCCCTTGGGAATGAG +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIAVLLG*LALGNE
Trigger: CTCATTCCCAAGGGCAAGCCACCCCAGCAGTACTGC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGTCTGGGTGATGCTGTaGGGTGGCATGATGACAGAC +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSVWVML*GGMMTD
Trigger: GTCTGTCATCATGCCACCCCACAGCATCACCCAGAC...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATGGCATCTGGTGTCTTaGCAGCTTCCTTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPWHLVS*QLPSLA
Trigger: AGCCAGGGAAGGAAGCTGCCAAGACACCAGATGCCA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGTCAGAGGCAGCCCCTaGAGTTGGTTACTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQVRGSP*SWLLGV
Trigger: TACCCCCAGTAACCAACTCCAGGGGCTGCCTCTGAC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGAAACAGCTCCCCGCTaGAGTGCACAATCTGCACCC +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIETAPR*SAQSAP
Trigger: GGGTGCAGATTGTGCACTCCAGCGGGGAGCTGTTTC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
3UTR CAA 72 bp AGAGAAACCCAGCCCCGGTGTCTGCGAGTCCATGGGTaGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAA +
Preference number: 4 (lower is better)
Translates to: RETQPRCLRVHG*VMCPWAKALCK
Trigger: TTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTGGGTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTGAGGAGAGTCATCAGTaGCATCTTGAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLEESHQ*HLEGVC
Trigger: GCAAACCCCCTCAAGATGTCACTGATGACTCTCCTC...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGAGAATTGGACCGCTTaGGTTTTTCCCGGTCTATCC +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLENWTA*VFPGLS
Trigger: GGATAGACCGGGAAAAACTCAAGCGGTCCAATTCTC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGCTCAACGGGCTCTTTaGCAGGAGAGCGGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPAQRAL*QESGFH
Trigger: ATGAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGC...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGGCAAGGGGCAGCACTaGCAGGCTCTGCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLGKGQH*QALQWL
Trigger: CAGCCATTGCAGAGCCTGTCAGTGCTGCCCCTTGCC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAAGACCAGTGAGGGTTTaGGGAGCTGGTTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPRPVRV*GAGFAK
Trigger: CTTGGCAAAACCAGCTCCTCAAACCCTCACTGGTCT...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATCTGTTTGCACTTTGTTaGCGGCGCAATCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHLFALC*RRNHCP
Trigger: GGGGCAGTGATTGCGCCGTCAACAAAGTGCAAACAG...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCATGTGGATGCACCATaGTCCTCACATCCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQHVDAP*SSHPVA
Trigger: TGCCACGGGATGTGAGGATCATGGTGCATCCACATG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATGTTTTGGGGCAGTCTaGGTGGGAAGAGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPCFGAV*VGRETG
Trigger: TCCAGTCTCTCTTCCCACTCAGACTGCCCCAAAACA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACATTGCCCACCCAGAGATaGCTGGTTTCCCGGACCATG +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTLPTQR*LVSRTM
Trigger: CATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAA...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACTGGGCAGTGTAAACTaGTCGCGAGCCCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVILGSVN*SRALGS
Trigger: TGAACCTAGGGCTCGCGAGCAGTTTACACTGCCCAG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAAAAGAGAGTTCTTGTTaGTTTGGGGTGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLKESSC*FGVKFI
Trigger: GATGAATTTCACCCCAAAGCAACAAGAACTCTCTTT...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAATCAGGCTCAGCATCTaGAGTGGCGTCTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSIRLSI*SGVWLF
Trigger: GAAAAGCCAGACGCCACTGCAGATGCTGAGCCTGAT...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGACGGTCACTGCACTTaGTGTGGCATTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHDGHCT*CGIHCT
Trigger: AGTGCAGTGAATGCCACAGCAAGTGCAGTGACCGTC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGAGAGATGTTGGAGATaGTGGCAAGGAGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQERCWR*WQGGQG
Trigger: CCCCTGACCTCCTTGCCAGCATCTCCAACATCTCTC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGACTCGGGATGGTGCCTaGTTCATTATAATCCGTGCG +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLTRDGA*FIIIRA
Trigger: CGCACGGATTATAATGAACCAGGCACCATCCCGAGT...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACTACGAGATGCTATaGAAACTGTATCATCCAATC +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLYYEML*KLYHPI
Trigger: GATTGGATGATACAGTTTCCATAGCATCTCGTAGTA...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTATCTGTAGAGCGTACTaGAAGATTCTGGACCTTGAT +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSICRAY*KILDLD
Trigger: ATCAAGGTCCAGAATCTTCCAGTACGCTCTACAGAT...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTTCACTTTCTGTTTCTaGACCTATCCATGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEFTFCF*TYPCCY
Trigger: GTAACAGCATGGATAGGTCCAGAAACAGAAAGTGAA...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACTCTCTCCCTCGAGCTaGATAGTCCCGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTLSPSS*IVPPGI
Trigger: GATTCCAGGCGGGACTATCCAGCTCGAGGGAGAGAG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTTTCCCTTTTTCCCTTaGGGTCCACCACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLFPFFP*GPPPAA
Trigger: TGCAGCTGGTGGTGGACCCCAAGGGAAAAAGGGAAA...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTCTTTCACGCCTATTTaGGGGCCCACCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHSFTPI*GPTSVV
Trigger: CACCACTGAGGTGGGCCCCCAAATAGGCGTGAAAGA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCCTCCTCAGCAGCCTTaGGTTCCATGGAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQPPQQP*VPWSSL
Trigger: AAGAGAGCTCCATGGAACCCAAGGCTGCTGAGGAGG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCTGCTTTTCTTCCTGTaGGGCTTCGGGGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQLLFFL*GFGVLY
Trigger: GTACAGCACCCCGAAGCCCCACAGGAAGAAAAGCAG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGGGGCACAGATGCTTTaGTTGGAGTCCTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLGAQML*LESFPQ
Trigger: TTGAGGAAAGGACTCCAACCAAAGCATCTGTGCCCC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGAGAGGCCTTTGTGTCTaGGGGAAGAGCTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQRGLCV*GKSWRW
Trigger: CCATCTCCAGCTCTTCCCCCAGACACAAAGGCCTCT...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATATCAGGGTGCTGGAGCTaGTGTCAACATCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVISGCWS*CQHQRP
Trigger: AGGCCTCTGATGTTGACACCAGCTCCAGCACCCTGA...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGGCATGGACCCTGGGTaGAACCGACTGTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLGMDPG*NRLFSL
Trigger: TAATGAAAACAGTCGGTTCCACCCAGGGTCCATGCC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAACGTGGAATGGGTaGCCACGTTCGCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTPTWNG*PRSHSL
Trigger: CAGGCTATGCGAACGTGGCCACCCATTCCACGTTGG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTGTGGTGACAATGCTTaGGGTGAGGACCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVCGDNA*GEDQLV
Trigger: AACCAGCTGGTCCTCACCCCAAGCATTGTCACCACA...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACATGGCCCGGGTCCACTTaGTCGAGGAGAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTWPGST*SRRMSI
Trigger: GATGCTCATTCTCCTCGACCAAGTGGACCCGGGCCA...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGCTGAGGGGCCTTGCTaGCTGGTGGCACCTTCACCA +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLAEGPC*LVAPSP
Trigger: TGGTGAAGGTGCCACCAGCCAGCAAGGCCCCTCAGC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGGCAGCTTTGGCATCTaGTGTCTTGGCAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHGSFGI*CLGSFL
Trigger: AAGGAAGCTGCCAAGACACCAGATGCCAAAGCTGCC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGGGGCCAGAGGTTGTTaGGACAAACAACGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSGARGC*DKQRLF
Trigger: AAACAGCCGTTGTTTGTCCCAACAACCTCTGGCCCC...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCTCACAACATCCTCTTaGTCACGGCCACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQLTTSS*SRPQGR
Trigger: TCTGCCCTGTGGCCGTGACCAAGAGGATGTTGTGAG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCTTGGTCGAGGAGAATaGGCATCTAGCTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVLGRGE*ASSFAA
Trigger: AGCTGCAAAGCTAGATGCTCATTCTCCTCGACCAAG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGAACTGTACATCCCGGTaGATCAAAGACGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQNCTSR*IKDGGS
Trigger: GCTGCCACCGTCTTTGATTCACCGGGATGTACAGTT...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCTCTCTACTACGAGATaGTATGGAAACTGTATCATC +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSLSTTR*YGNCII
Trigger: GATGATACAGTTTCCATAGCATCTCGTAGTAGAGAG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTACTGCTGGAATCACTaGTGTCACTGCTGGTACTAC +
Preference number: 4 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLYCWNH*CHCWYY
Trigger: GTAGTACCAGCAGTGACAGCAGTGATTCCAGCAGTA...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTACTGACTTTCCCGATTTaGAAAATCCACCTTAATTTT +
Preference number: 4 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLLTFPI*KIHLNF
Trigger: AAAATTAAGGTGGATTTTGCAAATCGGGAAAGTCAG...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTGCTCAGGCTTGAGGTaGTTCCTGGCTTTAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHCSGLR*FLALSL
Trigger: CAGGCTTAAAGCCAGGAAGCACCTCAAGCCTGAGCA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTGTTGTTTCGAAAATTTaGAAATCGGGAGTCCCAATC +
Preference number: 4 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSVVSKI*KSGVPI
Trigger: GATTGGGACTCCCGATTTGCAAATTTTCGAAACAAC...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACTTCGGCTTTCTGGTTTaGATCAGGCTCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHFGFLV*IRLSIC
Trigger: GCAGATGCTGAGCCTGATGCAAACCAGAAAGCCGAA...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATATTCACTTGCTTGGTGTaGAGGCTTGTCCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIFTCLV*RLVPVL
Trigger: GAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAA...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACTGTTGTCCCCTCATTTaGAGCAGGACTCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHCCPLI*SRTLTL
Trigger: CAAGGTGAGAGTCCTGCTGCAAATGAGGGGACAACA...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAAGCACTGACAGGCTCTaGAATGGCTGTGGTGACACT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVISTDRL*NGCGDT
Trigger: AGTGTCACCACAGCCATTGCAGAGCCTGTCAGTGCT...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGGAGACAGTTCGATCTaGTGGGATGCTGGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLGDSSI*WDAGPR
Trigger: TCGGGGCCCAGCATCCCAGCAGATCGAACTGTCTCC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGCCGTCACATGTGGATaGACCATGATCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQAVTCG*TMILTS
Trigger: GGATGTGAGGATCATGGTGCATCCACATGTGACGGC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGAGCTCCCCGCTGGAGTaGACAATCTGCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLSSPLE*TICTPW
Trigger: CCATGGGGTGCAGATTGTGCACTCCAGCGGGGAGCT...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAAAAGCAACTGGGAAGTaGGTGCAGGGACTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGKATGK*VQGLLQ
Trigger: CTGCAGCAGTCCCTGCACCCACTTCCCAGTTGCTTT...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACTTGTAGGTCTGAGCTaGGCCTTGAGCCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGLVGLS*ALSQTQ
Trigger: TTGGGTCTGGCTCAAGGCCCAGCTCAGACCTACAAG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAAACCATGTCGGACACTaGGAGAACCACCAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSNHVGH*ENHQSF
Trigger: AAAGGACTGGTGGTTCTCCCAGTGTCCGACATGGTT...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGGATCCTCATCTTCATaGAAGGAACCATGTCGGACA +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLGSSSS*KEPCRT
Trigger: TGTCCGACATGGTTCCTTCCATGAAGATGAGGATCC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGGCTCTGGGTGAGTaGGATTTGTGTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPEALGE*DLCSPS
Trigger: AGATGGTGAACACAAATCCCACTCACCCAGAGCCTC...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGATACGACTGTGACACTTaGAGGCCCAACGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGYDCDT*RPNGRW
Trigger: CCACCTTCCGTTGGGCCTCCAAGTGTCACAGTCGTA...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATGGTACTGTCAGGCTCTaGATCTACGTTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHGTVRL*IYVALC
Trigger: GCAGAGAGCAACGTAGATCCAGAGCCTGACAGTACC...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCATGGCTTTTCGGCCTTTaGCTCATTGGCTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSWLFGL*LIGFLR
Trigger: TCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCA...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATCTGTTTCACTTGCTTaGTGTGCAGGCTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPSVSLA*CAGLSL
Trigger: CAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGTCTTCCTCAGGGTGCTaGAGCTGGTGTCAACATCAG +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQSSSGC*SWCQHQ
Trigger: CTGATGTTGACACCAGCTCCAGCACCCTGAGGAAGA...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGGAGGCATTATATGTCTaGGCGGTCAGTACCAACGTG +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVEALYV*AVSTNV
Trigger: CACGTTGGTACTGACCGCCCAGACATATAATGCCTC...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGGGCTTCTCCAAGGATaGCCTATCGGCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTGLLQG*PIGLHR
Trigger: TCTGTGAAGGCCGATAGGCCATCCTTGGAGAAGCCC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAATGCTGGAGATGAACTaGGGCACTGGGATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGMLEMN*GTGMPA
Trigger: TGCAGGCATCCCAGTGCCCCAGTTCATCTCCAGCAT...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGTGCTCTACTCCCGTCTaGGTCCCCTTTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLCSTPV*VPFASW
Trigger: CCAGGAGGCAAAGGGGACCCAGACGGGAGTAGAGCA...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGATCTTGTTTGGGGGCTaGCTGGAATTCAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVILFGG*LEFSVW
Trigger: CCACACACTGAATTCCAGCCAGCCCCCAAACAAGAT...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAACTGCTGCTGCTGATTaGATCACTACTGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSTAAAD*ITTGGS
Trigger: AGATCCTCCAGTAGTGATTCAATCAGCAGCAGCAGT...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGTGCTGCAGACTGAACTaGTCGAGCTGGAGAATCATC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQCCRLN*SSWRII
Trigger: GATGATTCTCCAGCTCGATCAGTTCAGTCTGCAGCA...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTTCGCTGATTTGGCGTaGACTTCTGTAATTCCGTTC +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLFADLA*TSVIPF
Trigger: GAACGGAATTACAGAAGTTCACGCCAAATCAGCGAA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCTGGGGTCTTGGGATaGTTCTCTGTATCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVSGVLG*FSVSSC
Trigger: ACAGGAAGATACAGAGAATCATCCCAAGACCCCAGA...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCACTGAACAGGGGTCTTTaGACGCTTGCTTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPLNRGL*TLAFVW
Trigger: CCAAACAAAAGCAAGCGTTCAAAGACCCCTGTTCAG...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTCAGAAGTACATGACTaGGGAGGAGTGGAATGGGGT +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHSEVHD*GGVEWG
Trigger: ACCCCATTCCACTCCTCCTCAGTCATGTACTTCTGA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCTGGGACTTGGACACTaGCTGCTGAAATTCAATGTC +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVLGLGH*LLKFNV
Trigger: GACATTGAATTTCAGCAGTCAGTGTCCAAGTCCCAG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTGGCTTTTCAGGGCTTTaGTCTCGCTCATTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLGFSGL*SRSFSW
Trigger: CCAAGAAAATGAGCGAGAGCAAAGCCCTGAAAAGCC...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGGGATGTTCAAGGTCTaGAGCAGAGTTTTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLGMFKV*SRVFRS
Trigger: GCTTCTAAAAACTCTGCTGCAGACCTTGAACATCCC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACTGGTCACTCTTGGTTaGTCAACGGGCTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVILVTLG*STGSLT
Trigger: TGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGAGGATAAGGTGGAGGTaGTGGGAAGTTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQRIRWR*WEVFWL
Trigger: GAGCCAGAAAACTTCCCAGCACCTCCACCTTATCCT...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACCTCAGTTTCCAGGATaGCAGATACAGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIPQFPG*QIQPHL
Trigger: CAGATGAGGCTGTATCTGGCATCCTGGAAACTGAGG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGTCTGGGGGCACAGATaGTTTGGTTGGAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTVWGHR*FGWSPF
Trigger: GAAAGGACTCCAACCAAAGCATCTGTGCCCCCAGAC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAGAGACGAAGTGGAGCTaGACAGCAGCTGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGETKWS*TAAVSF
Trigger: GAATGACACAGCTGCTGTGCAGCTCCACTTCGTCTC...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGTCAAGGCTTTTTCTTaGTCCTCTTGCTGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHVKAFS*SSCCRK
Trigger: CTTTCGGCAGCAAGAGGACCAAGAAAAAGCCTTGAC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGCTCAGGATAAGTGCCTaGAGTTCGAACACTCTCATA +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLLRISA*SSNTLI
Trigger: TATGAGAGTGTTCGAACTCCAGGCACTTATCCTGAG...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACAAAGCGCCTTTTCCTaGCTTCCAGCTTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIQSAFS*LPASPD
Trigger: ATCTGGAGAAGCTGGAAGCCAGGAAAAGGCGCTTTG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACCCGTTTTGTCACCAGTaGTCTTCTCTAGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHPFCHQ*SSLVLM
Trigger: CATCAGCACTAGAGAAGACCACTGGTGACAAAACGG...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGGTTTTGAAAGTGGCTaGGTACTGTCAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIGFESG*VLSGSG
Trigger: TCCAGAGCCTGACAGTACCCAGCCACTTTCAAAACC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCACTTTCTGGTCACTCTTaGTTGCTCAACGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPLSGHS*LLNGLF
Trigger: AAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAG...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATTCTCCAGGATAAGGTaGAGGTGCTGGGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPFSRIR*RCWEVF
Trigger: GAAAACTTCCCAGCACCTCCACCTTATCCTGGAGAA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACATTGGATTCAGGGACATaGCTCTCTACAGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTLDSGT*LSTGAT
Trigger: GGTGGCTCCTGTAGAGAGCCATGTCCCTGAATCCAA...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGGTGAGAACATTCACTaGCCCCGTAAGAACATTCAC +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPGENIH*PRKNIH
Trigger: GTGAATGTTCTTACGGGGCCAGTGAATGTTCTCACC...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATTTGCAGCTGCCAAATaGGAGACAGTTCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPFAAAK*ETVRSA
Trigger: AGCAGATCGAACTGTCTCCCATTTGGCAGCTGCAAA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGAAACAACGGCTGTTTTaGGGCAGTCTGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQKQRLF*GSLSGK
Trigger: CTTCCCACTCAGACTGCCCCAAAACAGCCGTTGTTT...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACTGGAATTCAGTGTGTaGCAGAACCAGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTLEFSV*QNQSWW
Trigger: CCACCAGGACTGGTTCTGCCACACACTGAATTCCAG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAATATCCACGGGTCTCTaGGAAGTCAGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTISTGL*EVRCGE
Trigger: CTCTCCACACCTGACTTCCCAGAGACCCGTGGATAT...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAGTGTCTGCGAGTCCATaGGTTGGTGATGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGVSASP*VGDVSL
Trigger: CAAGGACACATCACCAACCCATGGACTCGCAGACAC...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTACAGCCTGTCTTCACTaGGCAAAAGTCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLTACLH*AKVQVT
Trigger: AGTGACTTGGACTTTTGCCCAGTGAAGACAGGCTGT...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTGTCACCCATTTTGTTaGCCGAGTTGTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLCHPFC*PSCELS
Trigger: AGAAAGCTCACAACTCGGTCAACAAAATGGGTGACA...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTGAAGATTCTGGACCTTaGTGCCAAAACTTTTACGGG +
Preference number: 4 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLEDSGP*CQNFYG
Trigger: CCCGTAAAAGTTTTGGCATCAAGGTCCAGAATCTTC...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAAAGTCTCTGATGTCTTaGCCAGATTTCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPKSLMS*PDFSMQ
Trigger: CTGCATGGAGAAATCTGGTCAAGACATCAGAGACTT...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATATCTCTCTCTGGTCCTTaGTCATCTAATACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVISLSGP*SSNTCS
Trigger: GCTGCAGGTATTAGATGATCAAGGACCAGAGAGAGA...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTTTCAGAATCTTCGCTaGTTTGGCGTGAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLFQNLR*FGVNFC
Trigger: ACAGAAGTTCACGCCAAATCAGCGAAGATTCTGAAA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGCATCCTGTTTCATCTaGGAGTCCCAACGATTTAGT +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHASCFI*ESQRFS
Trigger: ACTAAATCGTTGGGACTCTCAGATGAAACAGGATGC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGCTAGAGTTACGACTGTaGCACTTGGAGGCCCAACGG +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLLELRL*HLEAQR
Trigger: CCGTTGGGCCTCCAAGTGTCACAGTCGTAACTCTAG...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATAGACAAGTCAGATTTTaGAGGCTCCGTCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHRQVRF*RLRLRD
Trigger: GTCTCTCAGACGGAGCCTGCAAAATCTGACTTGTCT...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATTCCAAAAGCTTCTGTaGTTCTCCCCGAGGAGAATT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPFQKLL*FSPRRI
Trigger: AATTCTCCTCGGGGAGAAGCACAGAAGCTTTTGGAA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGTGTTTGTGTTTCGCTTaGGGCGTGATCGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQCLCFA*GVIGLF
Trigger: AAACAACCCGATCACGCCGCAAGCGAAACACAAACA...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACCTGCGTTAAGAGTCTaGAATGTGTGTCTACACACA +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSPALRV*NVCLHT
Trigger: TGTGTGTAGACACACATTGCAGACTCTTAACGCAGG...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGATCTGCAGTGGCGTCTaGCTTTTCGGCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLICSGV*LFGLWL
Trigger: GAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGAT...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGCTGAGAGGCAAACTTaGTTCGGGATGTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTAERQT*FGMFKV
Trigger: GACCTTGAACATCCCGAACCAAGTTTGCCTCTCAGC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATGTCAGGAGCATTGACTaGAGGCCTAGAAGATTCTGT +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHVRSID*RPRRFC
Trigger: ACAGAATCTTCTAGGCCTCCAGTCAATGCTCCTGAC...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACCACAGATGCTTTGGTTaGAGTCCTTTCCTCAACACT +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHHRCFG*SPFLNT
Trigger: AGTGTTGAGGAAAGGACTCCAACCAAAGCATCTGTG...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAACTTTTCAGTGTaGTCACTGAGCCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTPNFSV*SLSPSR
Trigger: CCGTGAAGGGCTCAGTGACCACACTGAAAAGTTTGG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGAGAGGAATCTTGTTTaGGGGCTGGCTGGAATTCAG +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTERNLV*GLAGIQ
Trigger: CTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACTGGGAAGTCAGGTGTaGAGAGGAATCTTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGLGSQV*RGILFG
Trigger: CCCAAACAAGATTCCTCTCCACACCTGACTTCCCAG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAATGACAATCATGAGGTaGGGAGAGATGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPMTIMR*GEMLEM
Trigger: CATCTCCAACATCTCTCCCCACCTCATGATTGTCAT...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACATCTTGGGAAGAATTTTaGCACTTTCCACGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTSWEEF*HFPRGH
Trigger: ATGGCCGCGTGGAAAGTGTCAAAATTCTTCCCAAGA...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATGGAGAATCATCACTTaGACTACTGCTGGAATCACT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPWRIIT*TTAGIT
Trigger: AGTGATTCCAGCAGTAGTTCAAGTGATGATTCTCCA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGATTCTTGGTCCGTTTCTaGAGACTGAGAACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGFLVRF*RLRTRG
Trigger: TCCCCTAGTTCTCAGTCTTCAGAAACGGACCAAGAA...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACCAGGGCAGAAGATTTaGCAGTGTCATTATCAAGCT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIPGQKI*QCHYQA
Trigger: AGCTTGATAATGACACTGTCAAATCTTCTGCCCTGG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGAACTACTGGTTCTTaGATGGAATCAGTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHRTTGS*MESVVL
Trigger: CAGCACAACTGATTCCATTCAAGAACCAGTAGTTCT...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGCATACTTGGGGTCCATaGGAATCTTCCTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLHTWGP*ESSSGC
Trigger: GCACCCTGAGGAAGATTCTCATGGACCCCAAGTATG...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTACTTCTTCAGAAGTTaGACCATATCCACGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHYFFRS*TISTGL
Trigger: GAGACCCGTGGATATGGTTCAACTTCTGAAGAAGTA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCATCCGTTCTCGCTTGGTaGAGATATCAAAATCGACAT +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSSVLAW*RYQNRH
Trigger: ATGTCGATTTTGATATCTGCACCAAGCGAGAACGGA...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATATGGTCACCCATGGTTaGATAGACGCTCCTTACATT +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHMVTHG*IDAPYI
Trigger: AATGTAAGGAGCGTCTATGCAACCATGGGTGACCAT...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGTCTTTTTGTACAGGTaGCGTGTGACACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQVFLYR*RVTLPH
Trigger: ATGTGGAAGTGTCACACGGCACCTGTACAAAAAGAC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCGTACTGGAAGATTCTaGACCTTGATGCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVRTGRF*TLMPKL
Trigger: AAGTTTTGGCATCAAGGTCCAGAATCTTCCAGTACG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACGATTTTCCTCCCTTTaGTCTCTTTTACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSRFSSL*SLLQLL
Trigger: AAGCAGCTGTAAAAGAGACCAAAGGGAGGAAAATCG...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACTTGTCTGGATCAACTaGATCACTTTTCAACTGGGA +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSLVWIN*ITFQLG
Trigger: TCCCAGTTGAAAAGTGATCCAGTTGATCCAGACAAG...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGATAAGGTGGAGGTGCTaGGAAGTTTTCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLIRWRC*EVFWLP
Trigger: GGGGAGCCAGAAAACTTCCCAGCACCTCCACCTTAT...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGGGACGAATTCTCTGTaGAGGGAATCTTGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTGTNSL*RESCLG
Trigger: ACCTAAGCAAGATTCCCTCCACAGAGAATTCGTCCC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGACAGACTGCTCTGGGTaGATGCTGGAGATGAACTGG +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLTDCSG*MLEMNW
Trigger: CCAGTTCATCTCCAGCATCCACCCAGAGCAGTCTGT...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGGCCCTGCCACACGATaGGGTACTTCTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLGPATR*GTSSEV
Trigger: AACTTCTGAAGAAGTACCCCATCGTGTGGCAGGGCC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGTTGAGGGACTCGGTCTaGCTCACAACATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLLRDSV*LTTSSW
Trigger: CCAAGAGGATGTTGTGAGCCAGACCGAGTCCCTCAA...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACCTTTCTGTGCACTTTTaGTGTCCACAAAATCCACAA +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHLSVHF*CPQNPQ
Trigger: TTGTGGATTTTGTGGACATCAAAAGTGCACAGAAAG...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAACCATACCTCTCTTCTaGAGTTCCATGTATCTGCAC +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGTIPLF*SSMYLH
Trigger: GTGCAGATACATGGAACTTCAGAAGAGAGGTATGGT...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTGCAGAAACGCATACTaGGGAACTCCATTTACTTTC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHCRNAY*GTPFTF
Trigger: GAAAGTAAATGGAGTTCCTCAGTATGCGTTTCTGCA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAATCATCGTAGTATCGTaGTTCATAGTAGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSIIVVS*FIVVSL
Trigger: CAAGGAGACTACTATGAATCACGATACTACGATGAT...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGGTACTCAGACTGCATaGCTAGTACCTCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLGTQTA*LVPLTA
Trigger: TGCAGTCAGAGGTACTAGTCATGCAGTCTGAGTACC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGTTGTGAGCTTTCTGTaGACTTTTGATGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPVVSFL*TFDVHK
Trigger: TTTGTGGACATCAAAAGTGCACAGAAAGCTCACAAC...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATATTTTCTTGGTCCTCTTaGTGCCGAAAGAATACCAGA +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIFSWSS*CRKNTR
Trigger: TCTGGTATTCTTTCGGCAGCAAGAGGACCAAGAAAA...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAACTCACATCAAATCTaGCAGCATCCTGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHNSHQI*QHPVSS
Trigger: AGATGAAACAGGATGCTGGCAGATTTGATGTGAGTT...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATCTTTTCTCTCTAGATaGTGCAATCGCTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPSFLSR*CNRLES
Trigger: AGATTCCAAGCGATTGCAGCATCTAGAGAGAAAAGA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCTTTTTCTTTCTGTTaGATCCGTGTGAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVSFSFC*IRVSSI
Trigger: TATGGAGCTCACACGGATGCAACAGAAAGAAAAAGA...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTCCATAAATCTGCTATaGAACAGAACTACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLSINLL*NRTTGS
Trigger: AGAACCAGTAGTTCTGTTCCATAGCAGATTTATGGA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGATCGGGTTGTTTTCTaGCGCCCTTTGTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLDRVVF*RPLSFR
Trigger: TCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATATTCTGGACCTATCCATaGTGTTACTTCAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIFWTYP*CYFNLH
Trigger: ATGCAGATTGAAGTAACAGCATGGATAGGTCCAGAA...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGAGAGAACCAGGGCCATaGCTTTTAAGCGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLREPGP*LLSGQT
Trigger: TGTTTGACCGCTTAAAAGGCATGGCCCTGGTTCTCT...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAGACCAGATTTCTCCATaGAGTGATAAAAAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTDQISP*SDKKPA
Trigger: AGCTGGCTTTTTATCACTGCATGGAGAAATCTGGTC...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTGTCAGCTTTCTCTCTaGTCAGTTTATTACAACTCC +
Preference number: 4 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHCQLSL*SVYYNS
Trigger: GGAGTTGTAATAAACTGAGCAGAGAGAAAGCTGACA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACATATTTTGGCCATATCTaGCATCTGTTCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTYFGHI*HLFSPA
Trigger: AGCAGGAGAGAACAGATGGCAGATATGGCCAAAATA...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGTTTCTCTCTAGATGCTaGAATCGCTTGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQFLSRC*NRLESC
Trigger: ACAAGATTCCAAGCGATTGCAGCATCTAGAGAGAAA...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAACACATCCCAAGTTCTaGATATCCCACCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTTHPKF*ISHQEK
Trigger: TTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGT...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACTGTCATTATCAAGCTTaGCTTTCAACTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHCHYQA*LSTFPQ
Trigger: CTGTGGAAAAGTTGAAAGCCAAGCTTGATAATGACA...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACATGGAACAGAACTACTaGTTCTTGAATGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHMEQNY*FLNGIS
Trigger: ACTGATTCCATTCAAGAACCAGTAGTTCTGTTCCAT...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACAAGGTTATCTTCTGTaGATTTTCCAGGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGQGYLL*IFQVNA
Trigger: AGCATTGACCTGGAAAATTCACAGAAGATAACCTTG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGAAGTTCCATGTATCTaGACTGAAGTTACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIEVPCI*TEVTFP
Trigger: TGGAAAAGTAACTTCAGTGCAGATACATGGAACTTC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGTTTCTCAACCTCTTTaGGTTTCTGGTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIVSQPL*VSGLFL
Trigger: AAGAAAAAGACCAGAAACCCAAAGAGGTTGAGAAAC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGAGGGTTTGAGGAGCTaGTTTTGCCAAGGTTATCTT +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLEGLRS*FCQGYL
Trigger: AAGATAACCTTGGCAAAACCAGCTCCTCAAACCCTC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGTCCTTTCCTCAACACTaGTTTCTTGGGACGAATTCT +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLSFPQH*FLGTNS
Trigger: AGAATTCGTCCCAAGAAATCAGTGTTGAGGAAAGGA...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGCGCACTTATACAAATaGGTGGGCAATACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLAHLYK*VGNTKS
Trigger: AGACTTTGTATTGCCCACTCATTTGTATAAGTGCGC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGCTGTTACTTCAATCTaGATGCCAAAGAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIAVTSI*MPKKSF
Trigger: AAAACTTTTCTTTGGCATGCAGATTGAAGTAACAGC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGTTTATTACAACTCCTaGGCTTTTCAGGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLVYYNS*AFQGFA
Trigger: AGCAAAGCCCTGAAAAGCCCAGGAGTTGTAATAAAC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CCA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGATTGGTGATGTGTCCTTaGGCTAAAGCATTATGTAAA +
Preference number: 4 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGLVMCP*AKALCK
Trigger: TTTACATAATGCTTTAGCCCAAGGACACATCACCAA...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR GCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGAGTGAACCTTTCCTTTaGGTTTCTGCTTGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLSEPFL*VSACQF
Trigger: AAACTGACAAGCAGAAACGCAAAGGAAAGGTTCACT...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR TCA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGTGTCGTGTTAAATACTaGTCTGACACATTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLCRVKY*SDTFEE
Trigger: TTCTTCGAATGTGTCAGATCAGTATTTAACACGACA...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CCTGGTTTCCCGGACCATGCTGGGCGGCGTGCCGGCGACCGCCGCTaGTGGCTCCCCCTCGCCGGCTTCGTACGAGACCGTCAGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PGFPDHAGRRAGDRR*WLPLAGFVRDRQRR
Trigger: CCGGCGCTGACGGTCTCGTACGAAGCCGGCGAGGGGGAGCCAGCAGCGGCGGTCGCCGGCACGCCGCCCAGCATGGTCCGGGAAACCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CGGGTAAGTTGCCCACCCAGAGATGCCTGGTTTCCCGGACCATGCTaGGCGGCGTGCCGGCGACCGCCGCTGCTGGCTCCCCCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: RVSCPPRDAWFPGPC*AACRRPPLLAPPRR
Trigger: CCGGCGAGGGGGAGCCAGCAGCGGCGGTCGCCGGCACGCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAACTTACCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TCTCGGGTAAGTTGCCCACCCAGAGATGCCTGGTTTCCCGGACCATaGTGGGCGGCGTGCCGGCGACCGCCGCTGCTGGCTCCCCCTCGC +
Preference number: 5 (lower is better)
Translates to: SRVSCPPRDAWFPGP*WAACRRPPLLAPPR
Trigger: GCGAGGGGGAGCCAGCAGCGGCGGTCGCCGGCACGCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAACTTACCCGAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CTTGGCAGCTTCCTTCCCTGGCTGCTGAGGGGCCTTGCTGGCTGGTaGCACCTTCACCACCCCATCCGCGGCCCTGGGCTGCTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: LGSFLPWLLRGLAGW*HLHHPIRGPGLLAD
Trigger: GTCAGCGAGCAGCCCAGGGCCGCGGATGGGGTGGTGAAGGTGCCACCAGCCAGCAAGGCCCCTCAGCAGCCAGGGAAGGAAGCTGCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CTGGTGTCTTGGCAGCTTCCTTCCCTGGCTGCTGAGGGGCCTTGCTaGCTGGTGGCACCTTCACCACCCCATCCGCGGCCCTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LVSWQLPSLAAEGPC*LVAPSPPHPRPWAA
Trigger: AGCAGCCCAGGGCCGCGGATGGGGTGGTGAAGGTGCCACCAGCCAGCAAGGCCCCTCAGCAGCCAGGGAAGGAAGCTGCCAAGACACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CATCTGGTGTCTTGGCAGCTTCCTTCCCTGGCTGCTGAGGGGCCTTaGTGGCTGGTGGCACCTTCACCACCCCATCCGCGGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: HLVSWQLPSLAAEGP*WLVAPSPPHPRPWA
Trigger: AGCCCAGGGCCGCGGATGGGGTGGTGAAGGTGCCACCAGCCAGCAAGGCCCCTCAGCAGCCAGGGAAGGAAGCTGCCAAGACACCAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CTTGGCCTCGTTCTCCTCCTCTTCATCGGCTCGCCGGCGTGTCTTTaGAGGCCTTCCCCTCCGAGGGGTGGTGGGAACCGCTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LGLVLLLFIGSPACL*RPSPPRGGGNRCSL
Trigger: GAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGAGCCGATGAAGAGGAGGAGAACGAGGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCACGAGGCCCCGGGAGTaGGAGGCTTGGCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGTRPRE*EAWHPD
Trigger: ATCTGGATGCCAAGCCTCCAACTCCCGGGGCCTCGT...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACACTCGCCGGCGTGTCTTaGGAGGCCTTCCCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTLAGVS*EAFPSE
Trigger: CTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGAG...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp ATCTTCTCTTCCCGCACGTTCTCGGGTAAGTTGCCCACCCAGAGATaGCTGGTTTCCCGGACCATGCTGGGCGGCGTGCCGGCGACCGCC +
Preference number: 5 (lower is better)
Translates to: IFSSRTFSGKLPTQR*LVSRTMLGGVPATA
Trigger: GGCGGTCGCCGGCACGCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAACTTACCCGAGAACGTGCGGGAAGAGAAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CGGCTCGCCGGCGTGTCTTTGGAGGCCTTCCCCTCCGAGGGGTGGTaGGAACCGCTGCAGCCTCCTGAAGCTCTCGCTCCAATCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RLAGVSLEAFPSEGW*EPLQPPEALAPISF
Trigger: GAAAGAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CATCGGCTCGCCGGCGTGTCTTTGGAGGCCTTCCCCTCCGAGGGGTaGTGGGAACCGCTGCAGCCTCCTGAAGCTCTCGCTCCAATCTCT +
Preference number: 5 (lower is better)
Translates to: HRLAGVSLEAFPSEG*WEPLQPPEALAPIS
Trigger: AGAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGAGCCGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCACAGGGGGTGTGTaGATCCCCTGGGTGAGAACC +
Preference number: 5 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGSTGGV*IPWVRT
Trigger: GGTTCTCACCCAGGGGATCAACACACCCCCTGTGCT...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTGCCGTACCGGTACTCTaGAAACAGCTCCCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLAVPVL*KQLPAG
Trigger: TCCAGCGGGGAGCTGTTTCAAGAGTACCGGTACGGC...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GCAGCTTTGGCATCTGGTGTCTTGGCAGCTTCCTTCCCTGGCTGCTaGGGGGCCTTGCTGGCTGGTGGCACCTTCACCACCCCATCCGCG +
Preference number: 5 (lower is better)
Translates to: AALASGVLAASFPGC*GALLAGGTFTTPSA
Trigger: CGCGGATGGGGTGGTGAAGGTGCCACCAGCCAGCAAGGCCCCTCAGCAGCCAGGGAAGGAAGCTGCCAAGACACCAGATGCCAAAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TCCAGCTGGGAGGCGAGGCTGCTCTACTCCCGTCTGGGTCCCCTTTaGCTCCTGGGACACTTGAGGCATCTTGCTGCTTGGTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SSWEARLLYSRLGPL*LLGHLRHLAAWWLA
Trigger: GGCCAGCCACCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCAAAGGGGACCCAGACGGGAGTAGAGCAGCCTCGCCTCCCAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CTGAACCTGGGTGTGAGGCTCAGGTGGCCTGTTTGCAGGTCCAGCTaGGAGGCGAGGCTGCTCTACTCCCGTCTGGGTCCCCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: LNLGVRLRWPVCRSS*EARLLYSRLGPLCL
Trigger: GAGGCAAAGGGGACCCAGACGGGAGTAGAGCAGCCTCGCCTCCCAGCTGGACCTGCAAACAGGCCACCTGAGCCTCACACCCAGGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTTGCTGGGGCCAGAGGTaGTTGGGACAAACAACGGCT +
Preference number: 5 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLCWGQR*LGQTTA
Trigger: AGCCGTTGTTTGTCCCAACAACCTCTGGCCCCAGCA...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GCGGAGCCCGAGGAGAGTGAAGCGCTTCTGGCCGGATGCTGTAGGTaGTACTGGGCAGCGTGGGAGTGTTCATTCTCACCTCGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: AEPEESEALLAGCCR*YWAAWECSFSPRPG
Trigger: CCCAGGGCGAGGTGAGAATGAACACTCCCACGCTGCCCAGTATCACCTACAGCATCCGGCCAGAAGCGCTTCACTCTCCTCGGGCTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TTGCTGGCTGGTGGCACCTTCACCACCCCATCCGCGGCCCTGGGCTaGTCGCTGACTGCCGTCACATGTGGATGCACCATGATCCTCACA +
Preference number: 5 (lower is better)
Translates to: LLAGGTFTTPSAALG*SLTAVTCGCTMILT
Trigger: TGTGAGGATCATGGTGCATCCACATGTGACGGCAGTCAGCGAGCAGCCCAGGGCCGCGGATGGGGTGGTGAAGGTGCCACCAGCCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACACGGGCCTGTTTCTGCTaGTGCCCTCTGAACCTGGGT +
Preference number: 5 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTRACFC*CPLNLG
Trigger: ACCCAGGTTCAGAGGGCACAAGCAGAAACAGGCCCG...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CGGTCACTGCACTTGCTGTGGCATTCACTGCACTCGCAGCGGCATTaGCTGTGCCTGGGGCGGCATTCACTGTGCCCACCGTGGCGTTCA +
Preference number: 5 (lower is better)
Translates to: RSLHLLWHSLHSQRH*LCLGRHSLCPPWRS
Trigger: TGAACGCCACGGTGGGCACAGTGAATGCCGCCCCAGGCACAGTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CTGGGACCTTGGCGACCGCCATCCCTCAGGTGGCTTGAGTGTTTCTaGAGGTTCCTTGGCCTCGTTCTCCTCCTCTTCATCGGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: LGPWRPPSLRWLECF*RFLGLVLLLFIGSP
Trigger: CGGCGAGCCGATGAAGAGGAGGAGAACGAGGCCAAGGAACCTGCAGAAACACTCAAGCCACCTGAGGGATGGCGGTCGCCAAGGTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp GCAGAGGCAGAGGCCTCAGCGAGCTTTGCGATGTGTTCCACGGCCTaGTCCAGCTCCATCTGCTTGGCTAACTGGGTGGCTTCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: AEAEASASFAMCSTA*SSSICLANWVASGD
Trigger: GTCCCCAGAAGCCACCCAGTTAGCCAAGCAGATGGAGCTGGAGCAGGCCGTGGAACACATCGCAAAGCTCGCTGAGGCCTCTGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp AGGGACCGATGGGCCAGGACGTTGTTGCCAGAGACGAAGTGGAGCTaGACAGCAGCTGTGTCATTCTTGAGGGCCAGCAGGCCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RDRWARTLLPETKWS*TAAVSFLRASRPCH
Trigger: GTGGCAGGGCCTGCTGGCCCTCAAGAATGACACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAACAACGTCCTGGCCCATCGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp ACTGTGGCGTTGGTGGAGAGCGCCGTAGATGCAGTACTGCTGGGGTaGCTTGCCCTTGGGAATGAGGATGGCCCGGGTCCACTTGGTCGA +
Preference number: 5 (lower is better)
Translates to: TVALVESAVDAVLLG*LALGNEDGPGPLGR
Trigger: TCGACCAAGTGGACCCGGGCCATCCTCATTCCCAAGGGCAAGCCACCCCAGCAGTACTGCATCTACGGCGCTCTCCACCAACGCCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp AGGTGCGGATGTCGCCGTACCGGTACTCTTGAAACAGCTCCCCGCTaGAGTGCACAATCTGCACCCCATGGGTCACCACCACAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RCGCRRTGTLETAPR*SAQSAPHGSPPQEG
Trigger: CCCCTCCTGTGGTGGTGACCCATGGGGTGCAGATTGTGCACTCCAGCGGGGAGCTGTTTCAAGAGTACCGGTACGGCGACATCCGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGGAGCCACCACTTTCTaGTTTGTGTTTCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGGATTF*FVFRLR
Trigger: CCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAAGCATGACTGTGGCGTaGGTGGAGAGCGCCGTAGAT +
Preference number: 5 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTSMTVA*VESAVD
Trigger: ATCTACGGCGCTCTCCACCAACGCCACAGTCATGCT...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGGCCCTGACCTCTATTaGCTGGGGCTGCAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLGPDLY*LGLQRS
Trigger: GCTCCGCTGCAGCCCCAGCAAATAGAGGTCAGGGCC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCAAACAACGGCTGTTTaGGGGCAGTCTGAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLQTTAV*GQSEWE
Trigger: TTCCCACTCAGACTGCCCCAAAACAGCCGTTGTTTG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GGAGGCCTTCCCCTCCGAGGGGTGGTGGGAACCGCTGCAGCCTCCTaGAGCTCTCGCTCCAATCTCTTTCTGGTCACTCTTGGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: GGLPLRGVVGTAAAS*SSRSNLFLVTLGCS
Trigger: TGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp ACCTTCACTGTGCCTCCCTGGGTGACAGGCGTGGACACCGAGAGGTaGATGGGCTCGGGCTTCTCCAAGGATGGCCTATCGGCCTTCACA +
Preference number: 5 (lower is better)
Translates to: TFTVPPWVTGVDTER*MGSGFSKDGLSAFT
Trigger: TGTGAAGGCCGATAGGCCATCCTTGGAGAAGCCCGAGCCCATTCACCTCTCGGTGTCCACGCCTGTCACCCAGGGAGGCACAGTGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp GCGTGTCTTTGGAGGCCTTCCCCTCCGAGGGGTGGTGGGAACCGCTaGAGCCTCCTGAAGCTCTCGCTCCAATCTCTTTCTGGTCACTCT +
Preference number: 5 (lower is better)
Translates to: ACLWRPSPPRGGGNR*SLLKLSLQSLSGHS
Trigger: AGAGTGACCAGAAAGAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TGCAGGCTTGTCCCTGTCCTCTGGGGCAAGGCCCTCTGGTGCATCTaGCTTATAGGCAGCAGAGGCAGAGGCCTCAGCGAGCTTTGCGAT +
Preference number: 5 (lower is better)
Translates to: CRLVPVLWGKALWCI*LIGSRGRGLSELCD
Trigger: ATCGCAAAGCTCGCTGAGGCCTCTGCCTCTGCTGCCTATAAGGCAGATGCACCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TTGGTGTGCAGGCTTGTCCCTGTCCTCTGGGGCAAGGCCCTCTGGTaGATCTGCCTTATAGGCAGCAGAGGCAGAGGCCTCAGCGAGCTT +
Preference number: 5 (lower is better)
Translates to: LVCRLVPVLWGKALW*ICLIGSRGRGLSEL
Trigger: AAGCTCGCTGAGGCCTCTGCCTCTGCTGCCTATAAGGCAGATGCACCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp AACCGCACCCGCTGTGACGGTCACTGCACTTGCTGTGGCATTCACTaGACTCGCAGCGGCATTGACTGTGCCTGGGGCGGCATTCACTGT +
Preference number: 5 (lower is better)
Translates to: NRTRCDGHCTCCGIH*TRSGIDCAWGGIHC
Trigger: ACAGTGAATGCCGCCCCAGGCACAGTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGACCGTCACAGCGGGTGCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp GGCGGTCAGTACCAACGTGGAATGGGTGGCCACGTTCGCATAGCCTaGAGGAGCTTGAGGGCCTTTGGATGGAGGCTGCGATGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: GGQYQRGMGGHVRIA*RSLRAFGWRLRCCD
Trigger: GTCACAGCATCGCAGCCTCCATCCAAAGGCCCTCAAGCTCCTGCAGGCTATGCGAACGTGGCCACCCATTCCACGTTGGTACTGACCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp ACTTGCTGTGGCATTCACTGCACTCGCAGCGGCATTGACTGTGCCTaGGGCGGCATTCACTGTGCCCACCGTGGCGTTCACTGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: TCCGIHCTRSGIDCA*GGIHCAHRGVHWSG
Trigger: ACCACTCCAGTGAACGCCACGGTGGGCACAGTGAATGCCGCCCCAGGCACAGTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TGGGAGACAGTTCGATCTGCTGGGATGCTGGGCCCCGAGGGGACATaGTTGACTTCTGTAGGCAGTTTGCTGGGCAGAGCAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: WETVRSAGMLGPEGT*LTSVGSLLGRAGGW
Trigger: CCACCCTCCTGCTCTGCCCAGCAAACTGCCTACAGAAGTCAACCATGTCCCCTCGGGGCCCAGCATCCCAGCAGATCGAACTGTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCTCTTGGGAAGAATTTaGACACTTTCCACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLLLGRI*TLSTRP
Trigger: TGGCCGCGTGGAAAGTGTCAAAATTCTTCCCAAGAG...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCTCTGGTCACTCTTGGTaGCTCAACGGGCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGSGHSW*LNGLFD
Trigger: GTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGA...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGTTTTCTGGCGCCCTTaGTCTTTCCGAACAAGAGTG +
Preference number: 5 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGVFWRP*SFRTRV
Trigger: CACTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAAC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCGCACAGATGCTTTGGTaGGAGTCCTTTCCTCAACAC +
Preference number: 5 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGAQMLW*ESFPQH
Trigger: GTGTTGAGGAAAGGACTCCAACCAAAGCATCTGTGC...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAGCAAACGGCCAGGAGGTGAGAGCTTaGCTGCAGTTACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PLLEEVWPTEPGGRTANGQEVRA*LQLQKA
Trigger: TGCCTTCTGTAACTGCAGCAAAGCTCTCACCTCCTG...GCCGTTTGCTGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCCTCTCTGTTTGCACTTaGTTGACGGCGCAATCACTG +
Preference number: 5 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGLSVCT*LTAQSL
Trigger: CAGTGATTGCGCCGTCAACAAAGTGCAAACAGAGAG...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGATGGCCCGGGTCCACTaGGTCGAGGAGAATGAGCAT +
Preference number: 5 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWMARVH*VEENEH
Trigger: ATGCTCATTCTCCTCGACCAAGTGGACCCGGGCCAT...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGCAGCTGTGTCATTCTaGAGGGCCAGCAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAAAVSF*RASRPC
Trigger: GCAGGGCCTGCTGGCCCTCAAGAATGACACAGCTGC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp GTCATTGATGATGGAGCCGATGGCCGCAGCCAGCTCTGTTTCACTTaGTTGGTGTGCAGGCTTGTCCCTGTCCTCTGGGGCAAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: VIDDGADGRSQLCFT*LVCRLVPVLWGKAL
Trigger: GAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTGGCTGCGGCCATCGGCTCCATCATCAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp ACCAGATGCAGCAGTAACCGCACCCGCTGTGACGGTCACTGCACTTaGTGTGGCATTCACTGCACTCGCAGCGGCATTGACTGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: TRCSSNRTRCDGHCT*CGIHCTRSGIDCAW
Trigger: CCAGGCACAGTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGACCGTCACAGCGGGTGCGGTTACTGCTGCATCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CCCTGCCATTGTCACCGTGCCTGTTGTGGCCGTTACACCACCAGATaGAGCAGTAACCGCACCCGCTGTGACGGTCACTGCACTTGCTGT +
Preference number: 5 (lower is better)
Translates to: PCHCHRACCGRYTTR*SSNRTRCDGHCTCC
Trigger: ACAGCAAGTGCAGTGACCGTCACAGCGGGTGCGGTTACTGCTGCATCTGGTGGTGTAACGGCCACAACAGGCACGGTGACAATGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TCCTCAGCAGCCTTGGGTTCCATGGAGCTCTCTTTCACGCCTATTTaGGGGCCCACCTCAGTGGTGGCCTCAGGACGTGTAGCATCCACC +
Preference number: 5 (lower is better)
Translates to: SSAALGSMELSFTPI*GPTSVVASGRVAST
Trigger: GGTGGATGCTACACGTCCTGAGGCCACCACTGAGGTGGGCCCCCAAATAGGCGTGAAAGAGAGCTCCATGGAACCCAAGGCTGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TTGATGATGGAGCCGATGGCCGCAGCCAGCTCTGTTTCACTTGCTTaGTGTGCAGGCTTGTCCCTGTCCTCTGGGGCAAGGCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LMMEPMAAASSVSLA*CAGLSLSSGARPSG
Trigger: ACCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTGGCTGCGGCCATCGGCTCCATCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GGTGGCATGATGACAGACTGCTCTGGGTGGATGCTGGAGATGAACTaGGGCACTGGGATGCCTGCAGCCAGCATGACTGTGGCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GGMMTDCSGWMLEMN*GTGMPAASMTVALV
Trigger: CACCAACGCCACAGTCATGCTGGCTGCAGGCATCCCAGTGCCCCAGTTCATCTCCAGCATCCACCCAGAGCAGTCTGTCATCATGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CACAGTCTGGGTGATGCTGTGGGGTGGCATGATGACAGACTGCTCTaGGTGGATGCTGGAGATGAACTGGGGCACTGGGATGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: HSLGDAVGWHDDRLL*VDAGDELGHWDACS
Trigger: GCTGCAGGCATCCCAGTGCCCCAGTTCATCTCCAGCATCCACCCAGAGCAGTCTGTCATCATGCCACCCCACAGCATCACCCAGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCACTTCTGAGCTGGTTTaGAAAGTGGCTGGGTACTGT +
Preference number: 5 (lower is better)
Translates to: AAGQQTAGRLAVESVPFGTSELV*KVAGYC
Trigger: ACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAGT...GCCGAAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGTGATGAAGGCAGCCTaGAGGGACTCGGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAVMKAA*RDSVWL
Trigger: GAGCCAGACCGAGTCCCTCAAGGCTGCCTTCATCAC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CATCCCGTGGCACAGTATAGGGGTGCAGTCGGTACTCAGACTGCATaGCTAGTACCTCTGACTGCACAGGGGCTGTGGCTCGAGCGACAG +
Preference number: 5 (lower is better)
Translates to: HPVAQYRGAVGTQTA*LVPLTAQGLWLERQ
Trigger: CTGTCGCTCGAGCCACAGCCCCTGTGCAGTCAGAGGTACTAGTCATGCAGTCTGAGTACCGACTGCACCCCTATACTGTGCCACGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp GGATCGGCTGTAAAGCCTCCTCTCAGAATCACTCGGCAACCTCTCTaGCTGAGAGGGAGACGCTCCAGGACTCTGTGGACGTCGCAAGTG +
Preference number: 5 (lower is better)
Translates to: GSAVKPPLRITRQPL*LRGRRSRTLWTSQV
Trigger: CACTTGCGACGTCCACAGAGTCCTGGAGCGTCTCCCTCTCAGGCAGAGAGGTTGCCGAGTGATTCTGAGAGGAGGCTTTACAGCCGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS GCA 90 bp GTAGGCAGGCTGATTGGAGCCAGGGTTGGGAACGTTGATGATCCCTaGCGCCTGCTTGGCCTGCAGGTAAGTGATGAAGGCAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VGRLIGARVGNVDDP*RLLGLQVSDEGSLE
Trigger: CTCAAGGCTGCCTTCATCACTTACCTGCAGGCCAAGCAGGCGGCAGGGATCATCAACGTTCCCAACCCTGGCTCCAATCAGCCTGCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000487496.1
CDS CCA 90 bp GCGGCTGGTCACCTGATGAACCTTCCTCAACACCCGCAGGCATCATaGCAGCTTCTTTATCGGGGTCTGCTCCTGGGGGCAGGTCTACTT +
Preference number: 5 (lower is better)
Translates to: AAGHLMNLPQHPQAS*QLLYRGLLLGAGLL
Trigger: AAGTAGACCTGCCCCCAGGAGCAGACCCCGATAAAGAAGCTGCCATGATGCCTGCGGGTGTTGAGGAAGGTTCATCAGGTGACCAGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CGTTGCTCTCTGCCTGGGAAAACGAGGCCCCGGGAGTTGGAGGCTTaGCATCCAGATAAGGCGGCTGGTCACCTGATGAACCTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: RCSLPGKTRPRELEA*HPDKAAGHLMNLPQ
Trigger: TTGAGGAAGGTTCATCAGGTGACCAGCCGCCTTATCTGGATGCCAAGCCTCCAACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CAGCTCTGTTTCACTTGCTTGGTGTGCAGGCTTGTCCCTGTCCTCTaGGGCAAGGCCCTCTGGTGCATCTGCCTTATAGGCAGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: QLCFTCLVCRLVPVL*GKALWCICLIGSRG
Trigger: GCCTCTGCTGCCTATAAGGCAGATGCACCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CTGGGAGAGGTGGCTCAGGGACACAGTCTGGGTGATGCTGTGGGGTaGCATGATGACAGACTGCTCTGGGTGGATGCTGGAGATGAACTG +
Preference number: 5 (lower is better)
Translates to: LGEVAQGHSLGDAVG*HDDRLLWVDAGDEL
Trigger: CAGTTCATCTCCAGCATCCACCCAGAGCAGTCTGTCATCATGCCACCCCACAGCATCACCCAGACTGTGTCCCTGAGCCACCTCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAACGTTCTCGGGTAAGTaGCCCACCCAGAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKATFSGK*PTQRCL
Trigger: CAGGCATCTCTGGGTGGGCAACTTACCCGAGAACGT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACACCTGATCGTAATGTCTaGTCCGATCAAATCCTCCCG +
Preference number: 5 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTPDRNV*SDQILP
Trigger: CGGGAGGATTTGATCGGACAAGACATTACGATCAGG...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGGGCGGCAGGACAGCAAACGGCTGGCCGTCTGGCAGTGGAGTCTGTCCCCTTACGACTCTGTTCCATTaGTTTTCGGTAACTCTGCGT +
Preference number: 5 (lower is better)
Translates to: PGGRTANGWPSGSGVCPLTTLFH*FSVTLR
Trigger: ACGCAGAGTTACCGAAAACAAATGGAACAGAGTCGT...AAGGGGACAGACTCCACTGCCAGACGGCCAGCCGTTTGCTGTCCTGCCGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATGGGGGCAGGTCTACTaGTTCCAGCTGTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLWGQVY*FQLFHR
Trigger: CCTGTGGAACAGCTGGAACAAGTAGACCTGCCCCCA...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGAGGCCTCAGCGAGCTTaGCGATGTGTTCCACGGCCT +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNERPQRA*RCVPRP
Trigger: AGGCCGTGGAACACATCGCAAAGCTCGCTGAGGCCT...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGAGCAGGACTCTCACCTaGAGCTTGGTTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWSRTLT*SLVGFR
Trigger: CCTGAATCCAACCAAGCTCAAGGTGAGAGTCCTGCT...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCACCCTGAACCTGGCTaGAGGCTCCTCATCCACCGG +
Preference number: 5 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSHPEPG*RLLIHR
Trigger: CCGGTGGATGAGGAGCCTCAAGCCAGGTTCAGGGTG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAGGAGCCACCTTTTCCTaGTCAGCAGCTACCAGCACC +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKAGATFS*SAATST
Trigger: GGTGCTGGTAGCTGCTGACAAGGAAAAGGTGGCTCC...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAACTTCTGTAGGCAGTTaGCTGGGCAGAGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKATSVGS*LGRAGG
Trigger: CCCTCCTGCTCTGCCCAGCAAACTGCCTACAGAAGT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATGCCTCCTGGGACACTaGAGGCATCTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKACLLGH*RHLAAW
Trigger: CCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCA...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp AGCCCCATCAAGTCTCCGCTCATAACGTCCTTCTCGTGCATGAAGTaGCGGTGGGGGACCATAAGCAGGCCCTCCACCACCTCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: SPIKSPLITSFSCMK*RWGTISRPSTTSSE
Trigger: TTCAGAGGAGGTGGTGGAGGGCCTGCTTATGGTCCCCCACCGTCACTTCATGCACGAGAAGGACGTTATGAGCGGAGACTTGATGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS TCA 90 bp GCTGATCTTGGCGCTGATCCGCTGTGGGCCTTCGGTCTTCTGCCCTaGGTAACTCAGGAGCACAACCCCTTCAGAAGTGTTCACACGCAG +
Preference number: 5 (lower is better)
Translates to: ADLGADPLWAFGLLP*VTQEHNPFRSVHTQ
Trigger: CTGCGTGTGAACACTTCTGAAGGGGTTGTGCTCCTGAGTTACTCAGGGCAGAAGACCGAAGGCCCACAGCGGATCAGCGCCAAGATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TACACCACCAGATGCAGCAGTAACCGCACCCGCTGTGACGGTCACTaGACTTGCTGTGGCATTCACTGCACTCGCAGCGGCATTGACTGT +
Preference number: 5 (lower is better)
Translates to: YTTRCSSNRTRCDGH*TCCGIHCTRSGIDC
Trigger: ACAGTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGACCGTCACAGCGGGTGCGGTTACTGCTGCATCTGGTGGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GGTGTCAACATCAGAGGCCTTTGTGTCTGGGGGAAGAGCTGGAGATaGAGTAGACTGAGCCCGTGGCTCCTCCTGCCTTGTGATCCACTC +
Preference number: 5 (lower is better)
Translates to: GVNIRGLCVWGKSWR*SRLSPWLLLPCDPL
Trigger: GAGTGGATCACAAGGCAGGAGGAGCCACGGGCTCAGTCTACTCCATCTCCAGCTCTTCCCCCAGACACAAAGGCCTCTGATGTTGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GGAGCTGGTGTCAACATCAGAGGCCTTTGTGTCTGGGGGAAGAGCTaGAGATGGAGTAGACTGAGCCCGTGGCTCCTCCTGCCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: GAGVNIRGLCVWGKS*RWSRLSPWLLLPCD
Trigger: ATCACAAGGCAGGAGGAGCCACGGGCTCAGTCTACTCCATCTCCAGCTCTTCCCCCAGACACAAAGGCCTCTGATGTTGACACCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CACTGTGCCCACCGTGGCGTTCACTGGAGTGGTGAGAACATTCACTaGCCCCGTAAGAACATTCACAGGCCCTTTCAGGACGTTCACGGG +
Preference number: 5 (lower is better)
Translates to: HCAHRGVHWSGENIH*PRKNIHRPFQDVHG
Trigger: CCCGTGAACGTCCTGAAAGGGCCTGTGAATGTTCTTACGGGGCCAGTGAATGTTCTCACCACTCCAGTGAACGCCACGGTGGGCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GGTGGCCACGTTCGCATAGCCTGCAGGAGCTTGAGGGCCTTTGGATaGAGGCTGCGATGCTGTGACAGAATCAGGTTTGACCTGGGACTT +
Preference number: 5 (lower is better)
Translates to: GGHVRIACRSLRAFG*RLRCCDRIRFDLGL
Trigger: AAGTCCCAGGTCAAACCTGATTCTGTCACAGCATCGCAGCCTCCATCCAAAGGCCCTCAAGCTCCTGCAGGCTATGCGAACGTGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TTTGGGGGCTGGCTGGAATTCAGTGTGTGGCAGAACCAGTCCTGGTaGGGTGCTGGGGCCAGAGGTTGTTGGGACAAACAACGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: FGGWLEFSVWQNQSW*GAGARGCWDKQRLF
Trigger: AAACAGCCGTTGTTTGTCCCAACAACCTCTGGCCCCAGCACCCCACCAGGACTGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GGGTCTCTGGGAAGTCAGGTGTGGAGAGGAATCTTGTTTGGGGGCTaGCTGGAATTCAGTGTGTGGCAGAACCAGTCCTGGTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: GSLGSQVWRGILFGG*LEFSVWQNQSWWGA
Trigger: AGCACCCCACCAGGACTGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGGTGGCAGACACATACTaGGGGTCCATGAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWVADTY*GSMRIF
Trigger: GAAGATTCTCATGGACCCCAAGTATGTGTCTGCCAC...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGGCACTCGCAGCGGCATaGACTGTGCCTGGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLALAAA*TVPGAA
Trigger: TGCCGCCCCAGGCACAGTCAATGCCGCTGCGAGTGC...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CTGCAGTTTTCTGGGACCTTGGCGACCGCCATCCCTCAGGTGGCTTaGGTGTTTCTGCAGGTTCCTTGGCCTCGTTCTCCTCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LQFSGTLATAIPQVA*VFLQVPWPRSPPLH
Trigger: ATGAAGAGGAGGAGAACGAGGCCAAGGAACCTGCAGAAACACTCAAGCCACCTGAGGGATGGCGGTCGCCAAGGTCCCAGAAAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp TCAGAGGCCTTTGTGTCTGGGGGAAGAGCTGGAGATGGAGTAGACTaGGCCCGTGGCTCCTCCTGCCTTGTGATCCACTCTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: SEAFVSGGRAGDGVD*ARGSSCLVIHSVTL
Trigger: TAAGGTGACAGAGTGGATCACAAGGCAGGAGGAGCCACGGGCTCAGTCTACTCCATCTCCAGCTCTTCCCCCAGACACAAAGGCCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp TGTTGCCAGAGACGAAGTGGAGCTGCACAGCAGCTGTGTCATTCTTaGGGGCCAGCAGGCCCTGCCACACGATGGGGTACTTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: CCQRRSGAAQQLCHS*GPAGPATRWGTSSE
Trigger: TTCTGAAGAAGTACCCCATCGTGTGGCAGGGCCTGCTGGCCCTCAAGAATGACACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp GCTTCCAGCTTCTCCAGATCCACAGCACTTACCCCATCTGCAGGCTaGTCAGGCTTGAGGTGCTTCCTGGCTTTAAGCCTGCCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ASSFSRSTALTPSAG*SGLRCFLALSLPSF
Trigger: GAAGGAAGGCAGGCTTAAAGCCAGGAAGCACCTCAAGCCTGAGCAGCCTGCAGATGGGGTAAGTGCTGTGGATCTGGAGAAGCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TTTCCTGGCTTCCAGCTTCTCCAGATCCACAGCACTTACCCCATCTaGAGGCTGCTCAGGCTTGAGGTGCTTCCTGGCTTTAAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: FPGFQLLQIHSTYPI*RLLRLEVLPGFKPA
Trigger: GGCAGGCTTAAAGCCAGGAAGCACCTCAAGCCTGAGCAGCCTGCAGATGGGGTAAGTGCTGTGGATCTGGAGAAGCTGGAAGCCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CTCAGGAGCAGCTTCGGCTTTCTGGTTTGCATCAGGCTCAGCATCTaGAGTGGCGTCTGGCTTTTCGGCCTTTGGCTCATTGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LRSSFGFLVCIRLSI*SGVWLFGLWLIGFL
Trigger: GAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAAACCAGAAAGCCGAAGCTGCTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp ACTCGGCAACCTCTCTGCCTGAGAGGGAGACGCTCCAGGACTCTGTaGACGTCGCAAGTGAACAGGACTTTGACTTCGTTCAATCGGCCT +
Preference number: 5 (lower is better)
Translates to: TRQPLCLRGRRSRTL*TSQVNRTLTSFNRP
Trigger: AGGCCGATTGAACGAAGTCAAAGTCCTGTTCACTTGCGACGTCCACAGAGTCCTGGAGCGTCTCCCTCTCAGGCAGAGAGGTTGCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 90 bp CAGGAGGTGAGAGCTTTGCTGCAGTTACAGAAGGCAGTGTGGGTATaGGGATGCTTGGATCGCTGGGTGGGGTCACCGGGTCACTTTCAA +
Preference number: 5 (lower is better)
Translates to: QEVRALLQLQKAVWV*GCLDRWVGSPGHFQ
Trigger: TTGAAAGTGACCCGGTGACCCCACCCAGCGATCCAAGCATCCCCATACCCACACTGCCTTCTGTAACTGCAGCAAAGCTCTCACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CCCGCGTCTGCCGGACGATCGTCGATCACAGGCATGGACCCTGGGTaGAACCGACTGTTTTCATTAGCACTCGCTCTCTGTTTGCACTTT +
Preference number: 5 (lower is better)
Translates to: PASAGRSSITGMDPG*NRLFSLALALCLHF
Trigger: AAAGTGCAAACAGAGAGCGAGTGCTAATGAAAACAGTCGGTTCCACCCAGGGTCCATGCCTGTGATCGACGATCGTCCGGCAGACGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GAGAGGCATTATATGTCTGGGCGGTCAGTACCAACGTGGAATGGGTaGCCACGTTCGCATAGCCTGCAGGAGCTTGAGGGCCTTTGGATG +
Preference number: 5 (lower is better)
Translates to: ERHYMSGRSVPTWNG*PRSHSLQELEGLWM
Trigger: CATCCAAAGGCCCTCAAGCTCCTGCAGGCTATGCGAACGTGGCCACCCATTCCACGTTGGTACTGACCGCCCAGACATATAATGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GATAACCACTCAGTGGCTCACACGGAGGCAATGACAATCATGAGGTaGGGAGAGATGTTGGAGATGCTGGCAAGGAGGTCAGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: DNHSVAHTEAMTIMR*GEMLEMLARRSGAR
Trigger: CCTGGCCCCTGACCTCCTTGCCAGCATCTCCAACATCTCTCCCCACCTCATGATTGTCATTGCCTCCGTGTGAGCCACTGAGTGGTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000487496.1
CDS-3UTR CAA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGAGTCAAGGCTTTTTCTaGGTCCTCTTGCTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWSQGFF*VLLLPK
Trigger: TTTCGGCAGCAAGAGGACCAAGAAAAAGCCTTGACT...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGGAGGGGTCAGGAGCATaGACTGGAGGCCTAGAAGAT +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEEGSGA*TGGLED
Trigger: ATCTTCTAGGCCTCCAGTCAATGCTCCTGACCCCTC...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTTGCGGCGTGATCGGGTaGTTTTCTGGCGCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSCGVIG*FSGALC
Trigger: ACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCA...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTACTGTTGTCCCCTCATTaGCAGCAGGACTCTCACCTT +
Preference number: 5 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLLLSPH*QQDSHL
Trigger: AAGGTGAGAGTCCTGCTGCAAATGAGGGGACAACAG...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACATTTGAGGAGCTGGTTTaGCCAAGGTTATCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTFEELV*PRLSSV
Trigger: CACAGAAGATAACCTTGGCAAAACCAGCTCCTCAAA...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAGGAGAGGAATCTTGTTaGGGGGCTGGCTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLGEESC*GAGWNS
Trigger: TGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCC...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGCCCCTTCCAGCTGCGTaGCCTCCAGCCGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLPLPAA*PPAASS
Trigger: AGAGGATGCGGCTGGAGGCAACGCAGCTGGAAGGGG...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GGGTGCTGTACTGTTGTCCCCTCATTTGCAGCAGGACTCTCACCTTaGGCTTGGTTGGATTCAGGGACATGGCTCTCTACAGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: GCCTVVPSFAAGLSP*AWLDSGTWLSTGAT
Trigger: GGTGGCTCCTGTAGAGAGCCATGTCCCTGAATCCAACCAAGCTCAAGGTGAGAGTCCTGCTGCAAATGAGGGGACAACAGTACAGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GCCCTTGGGAATGAGGATGGCCCGGGTCCACTTGGTCGAGGAGAATaGGCATCTAGCTTTGCAGCTGCCAAATGGGAGACAGTTCGATCT +
Preference number: 5 (lower is better)
Translates to: ALGNEDGPGPLGRGE*ASSFAAAKWETVRS
Trigger: AGATCGAACTGTCTCCCATTTGGCAGCTGCAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCGGGCCATCCTCATTCCCAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp AACGGGCTCTTTGACAGGAGAGCGGTTTTCATGGTCACCCATGGTTaGATAGACGCTCCTTACATTCCGGCGCCTTGTTCGGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: NGLFDRRAVFMVTHG*IDAPYIPAPCSAER
Trigger: CCTCTCAGCCGAACAAGGCGCCGGAATGTAAGGAGCGTCTATGCAACCATGGGTGACCATGAAAACCGCTCTCCTGTCAAAGAGCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GAGCAGCTTCGGCTTTCTGGTTTGCATCAGGCTCAGCATCTGCAGTaGCGTCTGGCTTTTCGGCCTTTGGCTCATTGGCTTCCTCAGACT +
Preference number: 5 (lower is better)
Translates to: EQLRLSGLHQAQHLQ*RLAFRPLAHWLPQT
Trigger: AGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAAACCAGAAAGCCGAAGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp AAATCACAGGAGAGGCATTATATGTCTGGGCGGTCAGTACCAACGTaGAATGGGTGGCCACGTTCGCATAGCCTGCAGGAGCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: KSQERHYMSGRSVPT*NGWPRSHSLQELEG
Trigger: GCCCTCAAGCTCCTGCAGGCTATGCGAACGTGGCCACCCATTCCACGTTGGTACTGACCGCCCAGACATATAATGCCTCTCCTGTGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp AGGCGTGGACACCGAGAGGTGAATGGGCTCGGGCTTCTCCAAGGATaGCCTATCGGCCTTCACAGACGAAATCACAGGAGAGGCATTATA +
Preference number: 5 (lower is better)
Translates to: RRGHREVNGLGLLQG*PIGLHRRNHRRGII
Trigger: TATAATGCCTCTCCTGTGATTTCGTCTGTGAAGGCCGATAGGCCATCCTTGGAGAAGCCCGAGCCCATTCACCTCTCGGTGTCCACGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp AAGGGTGACGGGGTCAGCAAGCTTCTTGTTTGTGGTGACAATGCTTaGGGTGAGGACCAGCTGGTTGTGAACCAGCACAGGGGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: KGDGVSKLLVCGDNA*GEDQLVVNQHRGCV
Trigger: AACACACCCCCTGTGCTGGTTCACAACCAGCTGGTCCTCACCCCAAGCATTGTCACCACAAACAAGAAGCTTGCTGACCCCGTCACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TATCCACGGGTCTCTGGGAAGTCAGGTGTGGAGAGGAATCTTGTTTaGGGGCTGGCTGGAATTCAGTGTGTGGCAGAACCAGTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: YPRVSGKSGVERNLV*GLAGIQCVAEPVLV
Trigger: CACCAGGACTGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGACCCGTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAAGCAATATCACAGTATaGCAGAAACGCATACTGAGG +
Preference number: 5 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTSNITV*QKRILR
Trigger: CCTCAGTATGCGTTTCTGCAATACTGTGATATTGCT...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCGTCTGGCAGTGGAGTCTGTCCCCTTCGGCAGCTTCTTCCTCTGCTTGGCTGGCCTTTGCGTTTCTGCTaGTCAGTTTTGTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PSGSGVCPLRQLLPLLGWPLRFC*SVLSFS
Trigger: GGAAAAGGACAAAACTGACAAGCAGAAACGCAAAGG...CCAGCCAAGCAGAGGAAGAAGCTGCCGAAGGGGACAGACTCCACTGCCAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGCTCTGTTTCACTTGCTaGGTGTGCAGGCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNELCFTC*VCRLVP
Trigger: AGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAG...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGCCGTCTGGGTCCCCTTaGCCTCCTGGGACACTTGAG +
Preference number: 5 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLPSGSP*PPGTLE
Trigger: CTCAAGTGTCCCAGGAGGCAAAGGGGACCCAGACGG...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTTGGGGCCAGAGGTTGTaGGGACAAACAACGGCTGTT +
Preference number: 5 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSWGQRL*GQTTAV
Trigger: AACAGCCGTTGTTTGTCCCAACAACCTCTGGCCCCA...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CCATGGTTGCATAGACGCTCCTTACATTCCGGCGCCTTGTTCGGCTaGGAGGCAAACTTGGTTCGGGATGTTCAAGGTCTGCAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: PWLHRRSLHSGALFG*EANLVRDVQGLQQS
Trigger: ACTCTGCTGCAGACCTTGAACATCCCGAACCAAGTTTGCCTCTCAGCCGAACAAGGCGCCGGAATGTAAGGAGCGTCTATGCAACCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GCTCAGCATCTGCAGTGGCGTCTGGCTTTTCGGCCTTTGGCTCATTaGCTTCCTCAGACTTCTGAGCTGGTTTTGAAAGTGGCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: AQHLQWRLAFRPLAH*LPQTSELVLKVAGY
Trigger: GTACCCAGCCACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TTCGGCTTTCTGGTTTGCATCAGGCTCAGCATCTGCAGTGGCGTCTaGCTTTTCGGCCTTTGGCTCATTGGCTTCCTCAGACTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: FGFLVCIRLSICSGV*LFGLWLIGFLRLLS
Trigger: GCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAAACCAGAAAGCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GAGCTTTGCTGCAGTTACAGAAGGCAGTGTGGGTATGGGGATGCTTaGATCGCTGGGTGGGGTCACCGGGTCACTTTCAATGATGGAATG +
Preference number: 5 (lower is better)
Translates to: ELCCSYRRQCGYGDA*IAGWGHRVTFNDGM
Trigger: CATTCCATCATTGAAAGTGACCCGGTGACCCCACCCAGCGATCCAAGCATCCCCATACCCACACTGCCTTCTGTAACTGCAGCAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTACCGATTTTCCTCCCTTaGGTCTCTTTTACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLPIFLP*VSFTAA
Trigger: AGCAGCTGTAAAAGAGACCAAAGGGAGGAAAATCGG...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGGGAGAATTGGACCGCTaGAGTTTTTCCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEGELDR*SFSRSI
Trigger: GATAGACCGGGAAAAACTCAAGCGGTCCAATTCTCC...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTTGTTTGTGTTTCGCTaGCGGCGTGATCGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNELFVFR*RRDRVV
Trigger: AACAACCCGATCACGCCGCAAGCGAAACACAAACAA...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCCACCACTTTCTTGTTaGTGTTTCGCTTGCGGCGTG +
Preference number: 5 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSPPLSC*CFACGV
Trigger: CACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGGGATCTGGCTGATCTaGGCGCTGATCCGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHGIWLI*ALIRCG
Trigger: CCCACAGCGGATCAGCGCCAAGATCAGCCAGATCCC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAAATGAGCATCTAGCTTaGCAGCTGCCAAATGGGAGA +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKANEHLA*QLPNGR
Trigger: TCTCCCATTTGGCAGCTGCAAAGCTAGATGCTCATT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGTGGGGTGGCTTGCCCTaGGGAATGAGGATGGCCCGG +
Preference number: 5 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQWGGLP*GMRMAR
Trigger: CCGGGCCATCCTCATTCCCAAGGGCAAGCCACCCCA...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGGAGGCATCTTGCTGCTaGGTGGCTGGCCGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQEASCC*VAGRAD
Trigger: GTCAGCCCGGCCAGCCACCAAGCAGCAAGATGCCTC...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTGGGCCAGGACGTTGTaGCCAGAGACGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLWARTL*PETKWS
Trigger: GCTCCACTTCGTCTCTGGCAACAACGTCCTGGCCCA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACCCAGGGTTGGGAACGTaGATGATCCCTGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHPGLGT*MIPAAC
Trigger: GCAGGCGGCAGGGATCATCAACGTTCCCAACCCTGG...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GAAGTGACGGTGGGGGACCATAAGCAGGCCCTCCACCACCTCCTCTaGACCCAGAAACCTCTCTACTACGAGATGCTATGGAAACTGTAT +
Preference number: 5 (lower is better)
Translates to: EVTVGDHKQALHHLL*TQKPLYYEMLWKLY
Trigger: ATACAGTTTCCATAGCATCTCGTAGTAGAGAGGTTTCTGGGTTCAGAGGAGGTGGTGGAGGGCCTGCTTATGGTCCCCCACCGTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS TCA 90 bp TTCCACAGGGGCAGGAGCAGGTTCAGATGCAGGCTTTGCTTCTTCTaGGACGGTAGCTGGCTCCACAGTCTTCTCTTCTGTTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: FHRGRSRFRCRLCFF*DGSWLHSLLFCYQR
Trigger: CCTTTGGTAACAGAAGAGAAGACTGTGGAGCCAGCTACCGTCTCAGAAGAAGCAAAGCCTGCATCTGAACCTGCTCCTGCCCCTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GCGTCTGGCTTTTCGGCCTTTGGCTCATTGGCTTCCTCAGACTTCTaGGCTGGTTTTGAAAGTGGCTGGGTACTGTCAGGCTCTGGATCT +
Preference number: 5 (lower is better)
Translates to: ASGFSAFGSLASSDF*AGFESGWVLSGSGS
Trigger: AGATCCAGAGCCTGACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp TTCACTGCTATTTCCTCTGGCTTCCTTGGTATCTGTTGGGCCGGCTaGGGGGTCAGGAGCATTGACTGGAGGCCTAGAAGATTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: FTAISSGFLGICWAG*GVRSIDWRPRRFCS
Trigger: GCTACAGAATCTTCTAGGCCTCCAGTCAATGCTCCTGACCCCTCAGCCGGCCCAACAGATACCAAGGAAGCCAGAGGAAATAGCAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CCCTCCACCACCTCCTCTGAACCCAGAAACCTCTCTACTACGAGATaGTATGGAAACTGTATCATCCAATCCCCGAGCAGCACTCGGGAT +
Preference number: 5 (lower is better)
Translates to: PSTTSSEPRNLSTTR*YGNCIIQSPSSTRD
Trigger: ATCCCGAGTGCTGCTCGGGGATTGGATGATACAGTTTCCATAGCATCTCGTAGTAGAGAGGTTTCTGGGTTCAGAGGAGGTGGTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 90 bp CAGATTCACCTGCTAGTTCTCCCAGTCTTGCTTGTAGGTCTGAGCTaGGCCTTGAGCCAGACCCAACAGAAATACTGGCAAGCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: QIHLLVLPVLLVGLS*ALSQTQQKYWQAPD
Trigger: GTCAGGAGCTTGCCAGTATTTCTGTTGGGTCTGGCTCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAGCAGGTGAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TGCAGCCTCCTGAAGCTCTCGCTCCAATCTCTTTCTGGTCACTCTTaGTTGCTCAACGGGCTCTTTGACAGGAGAGCGGTTTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: CSLLKLSLQSLSGHS*LLNGLFDRRAVFMV
Trigger: GACCATGAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGCGAGAGCTTCAGGAGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GACAGGCATCCGGCTAATAACAGAGGTAATTTTGGGAGCAATGACTaGAGCCACCTTTTCCTTGTCAGCAGCTACCAGCACCTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: DRHPANNRGNFGSND*SHLFLVSSYQHLRG
Trigger: GCCTCGGAGGTGCTGGTAGCTGCTGACAAGGAAAAGGTGGCTCCAGTCATTGCTCCCAAAATTACCTCTGTTATTAGCCGGATGCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCCAGTTTCTCATATCTaGGAGGGGAGAGTGAGCTAC +
Preference number: 5 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSPVSHI*EGRVSY
Trigger: GTAGCTCACTCTCCCCTCCAAGATATGAGAAACTGG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTACGCTCCAAACGAGACTaGTCCAGTTTCTCATATCTT +
Preference number: 5 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLRSKRD*SSFSYL
Trigger: AAGATATGAGAAACTGGACAAGTCTCGTTTGGAGCG...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTAGCAGCACCACTCCTAGAGGAAGTCTGGCCGACTGAGCCGGGCGGCAGGACAACAGATAGTTTTATTTaGGCCATATCTGCCATCTGT +
Preference number: 5 (lower is better)
Translates to: VAAPLLEEVWPTEPGGRTTDSFI*AISAIC
Trigger: ACAGATGGCAGATATGGCCAAAATAAAACTATCTGT...TGTCCTGCCGCCCGGCTCAGTCGGCCAGACTTCCTCTAGGAGTGGTGCTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCTGGGTGAGTGGGATTaGTGTTCACCATCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSLGEWD*CSPSSS
Trigger: TGACGAAGATGGTGAACACAAATCCCACTCACCCAG...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGGGGTGGGGGCAGCTTaGGCATCTGGTGTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIGVGAA*ASGVLA
Trigger: TGCCAAGACACCAGATGCCAAAGCTGCCCCCACCCC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCGATGGGCCAGGACGTaGTTGCCAGAGACGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVRWART*LPETKW
Trigger: CCACTTCGTCTCTGGCAACAACGTCCTGGCCCATCG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GAGCTGGGCCTTGAGCCAGACCCAACAGAAATACTGGCAAGCTCCTaGCAGTCTTTGGGGCTGGCAACAGTATTAAGTCTGTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ELGLEPDPTEILASS*QSLGLATVLSLSSL
Trigger: CAAACTGGACAGACTTAATACTGTTGCCAGCCCCAAAGACTGTCAGGAGCTTGCCAGTATTTCTGTTGGGTCTGGCTCAAGGCCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp TTCGGCCTTTGGCTCATTGGCTTCCTCAGACTTCTGAGCTGGTTTTaGAAGTGGCTGGGTACTGTCAGGCTCTGGATCTACGTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: FGLWLIGFLRLLSWF*KWLGTVRLWIYVAL
Trigger: GAGAGCAACGTAGATCCAGAGCCTGACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GCTCCAATCTCTTTCTGGTCACTCTTGGTTGCTCAACGGGCTCTTTaGCAGGAGAGCGGTTTTCATGGTCACCCATGGTTGCATAGACGC +
Preference number: 5 (lower is better)
Translates to: APISFWSLLVAQRAL*QESGFHGHPWLHRR
Trigger: GCGTCTATGCAACCATGGGTGACCATGAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp ACGTTCACCAGGCCAGTGAGTGCGCTCACCAGACCAGTGAGGGTTTaGGGAGCTGGTTTTGCCAAGGTTATCTTCTGTGAATTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TFTRPVSALTRPVRV*GAGFAKVIFCEFSR
Trigger: CCTGGAAAATTCACAGAAGATAACCTTGGCAAAACCAGCTCCTCAAACCCTCACTGGTCTGGTGAGCGCACTCACTGGCCTGGTGAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GAACCGACTGTTTTCATTAGCACTCGCTCTCTGTTTGCACTTTGTTaGCGGCGCAATCACTGCCCCTGCCATTGTCACCGTGCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: EPTVFISTRSLFALC*RRNHCPCHCHRACC
Trigger: ACAACAGGCACGGTGACAATGGCAGGGGCAGTGATTGCGCCGTCAACAAAGTGCAAACAGAGAGCGAGTGCTAATGAAAACAGTCGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TTTGTCTGTGCCAGCATCTTTTCTGTCACGTTTCTGTTCACTCCCTaGCTCCTCCTCAGCAGCCTTGGGTTCCATGGAGCTCTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: FVCASIFSVTFLFTP*LLLSSLGFHGALFH
Trigger: GTGAAAGAGAGCTCCATGGAACCCAAGGCTGCTGAGGAGGAGGCAGGGAGTGAACAGAAACGTGACAGAAAAGATGCTGGCACAGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CATGGCTCTCTACAGGAGCCACCACTTTCTTGTTTGTGTTTCGCTTaGGGCGTGATCGGGTTGTTTTCTGGCGCCCTTTGTCTTTCCGAA +
Preference number: 5 (lower is better)
Translates to: HGSLQEPPLSCLCFA*GVIGLFSGALCLSE
Trigger: TTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGAGAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GACGCTCCTTACATTCCGGCGCCTTGTTCGGCTGAGAGGCAAACTTaGTTCGGGATGTTCAAGGTCTGCAGCAGAGTTTTTAGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: DAPYIPAPCSAERQT*FGMFKVCSRVFRSS
Trigger: ACTGCTTCTAAAAACTCTGCTGCAGACCTTGAACATCCCGAACCAAGTTTGCCTCTCAGCCGAACAAGGCGCCGGAATGTAAGGAGCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GGGTTGCAGATCTGTCTGGGATTCTCCAGGATAAGGTGGAGGTGCTaGGAAGTTTTCTGGCTCCCCAGAAATGTCATTGATGATGGAGCC +
Preference number: 5 (lower is better)
Translates to: GLQICLGFSRIRWRC*EVFWLPRNVIDDGA
Trigger: GGCTCCATCATCAATGACATTTCTGGGGAGCCAGAAAACTTCCCAGCACCTCCACCTTATCCTGGAGAATCCCAGACAGATCTGCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CTGTTGTCCCCTCATTTGCAGCAGGACTCTCACCTTGAGCTTGGTTaGATTCAGGGACATGGCTCTCTACAGGAGCCACCACTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LLSPHLQQDSHLELG*IQGHGSLQEPPLSC
Trigger: ACAAGAAAGTGGTGGCTCCTGTAGAGAGCCATGTCCCTGAATCCAACCAAGCTCAAGGTGAGAGTCCTGCTGCAAATGAGGGGACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp CTTCAGAAGTTGAACCATATCCACGGGTCTCTGGGAAGTCAGGTGTaGAGAGGAATCTTGTTTGGGGGCTGGCTGGAATTCAGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: LQKLNHIHGSLGSQV*RGILFGGWLEFSVW
Trigger: CCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGACCCGTGGATATGGTTCAACTTCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCCAGGGCAGAAGATTaGACAGTGTCATTATCAAGC +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNESRAED*TVSLSS
Trigger: GCTTGATAATGACACTGTCAAATCTTCTGCCCTGGA...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTCCAGCTCCATCTGCTaGGCTAACTGGGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLSSSIC*ANWVAS
Trigger: AGAAGCCACCCAGTTAGCCAAGCAGATGGAGCTGGA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATCTTCCTTGGTATCTGTaGGGCCGGCTGAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHLPWYL*GRLRGQ
Trigger: CTGACCCCTCAGCCGGCCCAACAGATACCAAGGAAG...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGATAACAGAGGTAATTTaGGGAGCAATGACTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEITEVI*GAMTGA
Trigger: GGCTCCAGTCATTGCTCCCAAAATTACCTCTGTTAT...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACTTGTCACCGTGCCTGTaGTGGCCGTTACACCACCAG +
Preference number: 5 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHLSPCL*WPLHHQ
Trigger: CTGGTGGTGTAACGGCCACAACAGGCACGGTGACAA...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATACTGCTGGGGTGGCTaGCCCTTGGGAATGAGGATG +
Preference number: 5 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPYCWGG*PLGMRM
Trigger: CATCCTCATTCCCAAGGGCAAGCCACCCCAGCAGTA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGAGGCAGCCCCTGGAGTaGGTTACTGGGGGTAACTGT +
Preference number: 5 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVRQPLE*VTGGNC
Trigger: ACAGTTACCCCCAGTAACCAACTCCAGGGGCTGCCT...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CTCTACAGGAGCCACCACTTTCTTGTTTGTGTTTCGCTTGCGGCGTaGTCGGGTTGTTTTCTGGCGCCCTTTGTCTTTCCGAACAAGAGT +
Preference number: 5 (lower is better)
Translates to: LYRSHHFLVCVSLAA*SGCFLAPFVFPNKS
Trigger: ACTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp ATGCTATGGAAACTGTATCATCCAATCCCCGAGCAGCACTCGGGATaGTGCCTGGTTCATTATAATCCGTGCGTAGGTCTCTGTCACCCA +
Preference number: 5 (lower is better)
Translates to: MLWKLYHPIPEQHSG*CLVHYNPCVGLCHP
Trigger: TGGGTGACAGAGACCTACGCACGGATTATAATGAACCAGGCACCATCCCGAGTGCTGCTCGGGGATTGGATGATACAGTTTCCATAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 90 bp TTTACTGACAGTAGCCTAGGGGAGCCTATGGGATCCTCATCTTCATaGAAGGAACCATGTCGGACACTGGGAGAACCACCAGTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: FTDSSLGEPMGSSSS*KEPCRTLGEPPVLS
Trigger: TGAAAGGACTGGTGGTTCTCCCAGTGTCCGACATGGTTCCTTCCATGAAGATGAGGATCCCATAGGCTCCCCTAGGCTACTGTCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTCCATCCTTTTCTTTTaGCTAGGAGGAGAGTCATCA +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNESILFF*LGGESS
Trigger: TGATGACTCTCCTCCTAGCAAAAAGAAAAGGATGGA...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTGGCGCCTCTACCGTTTaGTCACCAGTGGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLGASTV*SPVVFS
Trigger: AGAGAAGACCACTGGTGACAAAACGGTAGAGGCGCC...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGGCTCTGGATCTACGTaGCTCTCTGCCTGGGAAAAC +
Preference number: 5 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHGSGST*LSAWEN
Trigger: GTTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGCCCCGGTGTCTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCAAACGCTTGCTTTTGTTaGGCTTTTTATCCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: QPRCLRVHGLVMCPWAKANACFC*AFYPLQ
Trigger: CTGCAAAGGATAAAAAGCCAAACAAAAGCAAGCGTT...TGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAGACACCGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGGTTTCTGCAGGTTCCTaGGCCTCGTTCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVVSAGS*ASFSSS
Trigger: AGAGGAGGAGAACGAGGCCAAGGAACCTGCAGAAAC...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACAGTTTTCTGGGACCTaGGCGACCGCCATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGQFSGT*ATAIPQ
Trigger: CTGAGGGATGGCGGTCGCCAAGGTCCCAGAAAACTG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCTCTTTCACGCCTATTaGGGGGCCCACCTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQLFHAY*GAHLSG
Trigger: ACCACTGAGGTGGGCCCCCAAATAGGCGTGAAAGAG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGTCCCCAGAAATGTCATaGATGATGGAGCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLSPEMS*MMEPMA
Trigger: GGCCATCGGCTCCATCATCAATGACATTTCTGGGGA...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTTTCCTCTGGCTTCCTaGGTATCTGTTGGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLFPLAS*VSVGPA
Trigger: AGCCGGCCCAACAGATACCAAGGAAGCCAGAGGAAA...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACGGGGTGCTGTACTGTaGTCCCCTCATTTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIRGAVL*SPHLQQ
Trigger: CTGCTGCAAATGAGGGGACAACAGTACAGCACCCCG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGATAGCCTGCAGGAGCTaGAGGGCCTTTGGATGGAGG +
Preference number: 5 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQIACRS*RAFGWR
Trigger: CCTCCATCCAAAGGCCCTCAAGCTCCTGCAGGCTAT...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACCCGAGGGGACATGGTaGACTTCTGTAGGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSPEGTW*TSVGSL
Trigger: CAAACTGCCTACAGAAGTCAACCATGTCCCCTCGGG...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGTGTACTTCTTCAGAAGTaGAACCATATCCACGGGTCT +
Preference number: 5 (lower is better)
Translates to: HIAGAGPVLYRSALIQMSVLLQK*NHIHGS
Trigger: AGACCCGTGGATATGGTTCAACTTCTGAAGAAGTAC...ACTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAGCTCACAACATCCTCTaGGTCACGGCCACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGAHNIL*VTATGQ
Trigger: CTGCCCTGTGGCCGTGACCAAGAGGATGTTGTGAGC...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp AGAGATGAAAGCAACTGGGAAGTGGGTGCAGGGACTGCTGCAGACTaGACTGATCGAGCTGGAGAATCATCACTTGAACTACTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: RDESNWEVGAGTAAD*TDRAGESSLELLLE
Trigger: TTCCAGCAGTAGTTCAAGTGATGATTCTCCAGCTCGATCAGTTCAGTCTGCAGCAGTCCCTGCACCCACTTCCCAGTTGCTTTCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375759.8
ENST00000438066.1
ENST00000442985.1
ENST00000673875.1
CDS TCA 90 bp CATGTCGGACACTGGGAGAACCACCAGTCCTTTCAGAATCTTCGCTaGTTTGGCGTGAACTTCTGTAATTCCGTTCTCGCTTGGTGCAGA +
Preference number: 5 (lower is better)
Translates to: HVGHWENHQSFQNLR*FGVNFCNSVLAWCR
Trigger: TCTGCACCAAGCGAGAACGGAATTACAGAAGTTCACGCCAAATCAGCGAAGATTCTGAAAGGACTGGTGGTTCTCCCAGTGTCCGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GGTCTGGGGGCACAGATGCTTTGGTTGGAGTCCTTTCCTCAACACTaGTTTCTTGGGACGAATTCTCTGTGGAGGGAATCTTGCTTAGGT +
Preference number: 5 (lower is better)
Translates to: GLGAQMLWLESFPQH*FLGTNSLWRESCLG
Trigger: ACCTAAGCAAGATTCCCTCCACAGAGAATTCGTCCCAAGAAATCAGTGTTGAGGAAAGGACTCCAACCAAAGCATCTGTGCCCCCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTaGGGTGATAACCACTCAGTGGCTCACACGGAGGCAATGACAATC +
Preference number: 5 (lower is better)
Translates to: LGCPLFLLQSPGKIH*GDNHSVAHTEAMTI
Trigger: GATTGTCATTGCCTCCGTGTGAGCCACTGAGTGGTTATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000487496.1
CDS GCA 90 bp CTATGGAAACTGTATCATCCAATCCCCGAGCAGCACTCGGGATGGTaGCTGGTTCATTATAATCCGTGCGTAGGTCTCTGTCACCCATTT +
Preference number: 5 (lower is better)
Translates to: LWKLYHPIPEQHSGW*LVHYNPCVGLCHPF
Trigger: AAATGGGTGACAGAGACCTACGCACGGATTATAATGAACCAGGCACCATCCCGAGTGCTGCTCGGGGATTGGATGATACAGTTTCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS-3UTR CAA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGGAGCATCAAAGCGATTaGGACTTCGACTCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLEHQSD*DFDSEK
Trigger: CTTCTCGGAGTCGAAGTCCAAATCGCTTTGATGCTC...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATTGTGGGTCTAGATGCTaGGCTAGCCAGTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHCGSRC*ASQSLR
Trigger: CCTCAGAGACTGGCTAGCCAAGCATCTAGACCCACA...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTGACACTTCCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTAATAATATGTACGATCTaGGTTATAGTCGTAGGATGC +
Preference number: 5 (lower is better)
Translates to: CDTSTSREQDPCCTEAHLIICTI*VIVVGC
Trigger: GCATCCTACGACTATAACCAAGATCGTACATATTAT...TAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGGAAGTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACGTCAGGCTGCTTTTTaGAAAGCACGCGAGCATCCT +
Preference number: 5 (lower is better)
Translates to: CNVCLHTPRHPECHSLSSRQAAF*KAREHP
Trigger: AGGATGCTCGCGTGCTTTCAAAAAAGCAGCCTGACG...TGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCTAGTTCTCCCAGTCTaGCTTGTAGGTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLLVLPV*LVGLSW
Trigger: CCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACTGGCTTTTCGGCCTTaGGCTCATTGGCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: WVVLCFYCRALGRFTEVILAFRP*AHWLPQ
Trigger: CTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATCTCCCCGAGGAGAATaGGACCGCTTGAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPSPRGE*DRLSFS
Trigger: GGAAAAACTCAAGCGGTCCAATTCTCCTCGGGGAGA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACTGCTCAACGGGCTCTTaGACAGGAGAGCGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHCSTGS*TGERFS
Trigger: TGAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGCA...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTCTGGTCACTCTaGGTTGCTCAACGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLSFWSL*VAQRAL
Trigger: AAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGA...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCACCAGCTCTGTTTCACTaGCTTGGTGTGCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPPALFH*LGVQAC
Trigger: ACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTGG...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTGCGAGTCCATGGGTTGGTGATGTGTCCTTGGGCTAAAGCATTATGTAAACATGGGGGCACAGATGCTTaGGTTGGAGTCCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LRVHGLVMCPWAKALCKHGGTDA*VGVLSS
Trigger: TGAGGAAAGGACTCCAACCAAAGCATCTGTGCCCCC...ATGTTTACATAATGCTTTAGCCCAAGGACACATCACCAACCCATGGACTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCAGACCAGTGAGGGTTaGAGGAGCTGGTTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLQTSEG*RSWFCQ
Trigger: TTGGCAAAACCAGCTCCTCAAACCCTCACTGGTCTG...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATCTGTTTGCACTTTGTaGACGGCGCAATCACTGCCC +
Preference number: 5 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPSVCTL*TAQSLP
Trigger: GGGCAGTGATTGCGCCGTCAACAAAGTGCAAACAGA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACTGCGAGTCCATGGGTaGGTGATGTGTCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGLRVHG*VMCPWA
Trigger: AGCCCAAGGACACATCACCAACCCATGGACTCGCAG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp TGGTCTTCTCTAGTGCTGATGGGGCTGATTCTAGAGTTACGACTGTaGCACTTGGAGGCCCAACGGAAGGTGGAGTTTTCAGTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: WSSLVLMGLILELRL*HLEAQRKVEFSVLN
Trigger: ATTCAGAACTGAAAACTCCACCTTCCGTTGGGCCTCCAAGTGTCACAGTCGTAACTCTAGAATCAGCCCCATCAGCACTAGAGAAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp CTCTCCCTCGAGCTGGATAGTCCCGCCTGGAATCCTCAGGATAAGTaGCTGGAGTTCGAACACTCTCATAATATGTACGATCTTGGTTAT +
Preference number: 5 (lower is better)
Translates to: LSLELDSPAWNPQDK*LEFEHSHNMYDLGY
Trigger: ATAACCAAGATCGTACATATTATGAGAGTGTTCGAACTCCAGGCACTTATCCTGAGGATTCCAGGCGGGACTATCCAGCTCGAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 90 bp CCCTCGAGCTGGATAGTCCCGCCTGGAATCCTCAGGATAAGTGCCTaGAGTTCGAACACTCTCATAATATGTACGATCTTGGTTATAGTC +
Preference number: 5 (lower is better)
Translates to: PSSWIVPPGILRISA*SSNTLIICTILVIV
Trigger: GACTATAACCAAGATCGTACATATTATGAGAGTGTTCGAACTCCAGGCACTTATCCTGAGGATTCCAGGCGGGACTATCCAGCTCGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 90 bp TCTTCTCTTCTGTTACCAAAGGCGCCTCTACCGTTTTGTCACCAGTaGTCTTCTCTAGTGCTGATGGGGCTGATTCTAGAGTTACGACTG +
Preference number: 5 (lower is better)
Translates to: SSLLLPKAPLPFCHQ*SSLVLMGLILELRL
Trigger: CAGTCGTAACTCTAGAATCAGCCCCATCAGCACTAGAGAAGACCACTGGTGACAAAACGGTAGAGGCGCCTTTGGTAACAGAAGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTTCGCTATTCCCTCTTaGTCAGCTTTCTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLFAIPS*SAFSLL
Trigger: GAGCAGAGAGAAAGCTGACAAAGAGGGAATAGCGAA...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CCACATCGCGGGAGCAGGACCCGTGCTGTACCGAAGCGCACTTATACAAATGAGAGGGAATGGGCTTTTTaGATTGGACTTCTTGATTTT +
Preference number: 5 (lower is better)
Translates to: PHRGSRTRAVPKRTYTNEREWAF*IGLLDF
Trigger: AAAATCAAGAAGTCCAATCAAAAAAGCCCATTCCCT...CTCATTTGTATAAGTGCGCTTCGGTACAGCACGGGTCCTGCTCCCGCGATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTCTCGCTCACGTAGCTaGTCTTCTCTGTCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLSRSRS*SSLSLN
Trigger: ATTGAGGGACAGAGAAGACAAGCTACGTGAGCGAGA...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGCAGCACCTCCGAGGCTaGTATCTCAGAGTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: SCVKSLQCVSTHTKTSRVQHLRG*YLRVVC
Trigger: ACAAACAACTCTGAGATACAAGCCTCGGAGGTGCTG...CACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGTCACTGCCCCTGCCATaGTCACCGTGCCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLSLPLP*SPCLLW
Trigger: CCACAACAGGCACGGTGACAATGGCAGGGGCAGTGA...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACGTGACAGAATCAGGTTaGACCTGGGACTTGGACACT +
Preference number: 5 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHVTESG*TWDLDT
Trigger: AGTGTCCAAGTCCCAGGTCAAACCTGATTCTGTCAC...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAGTGTGGAGAGGAATCTaGTTTGGGGGCTGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGVWRGI*FGGWLE
Trigger: TTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACAC...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CCTTTCCCTCTTTCTCTTTCACTCGAGTCAAAACCACGCAAGGCATaGGTTCCAGGCGGTTTTTCGCTATTCCCTCTTTGTCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PFPLSLSLESKPRKA*VPGGFSLFPLCQLS
Trigger: AGAAAGCTGACAAAGAGGGAATAGCGAAAAACCGCCTGGAACTCATGCCTTGCGTGGTTTTGACTCGAGTGAAAGAGAAAGAGGGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GCTCCGTCTGAGAGACCTGAAGTTTCTGGTCCAGGGCAGAAGATTTaGCAGTGTCATTATCAAGCTTGGCTTTCAACTTTTCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: APSERPEVSGPGQKI*QCHYQAWLSTFPQE
Trigger: CTCCTGTGGAAAAGTTGAAAGCCAAGCTTGATAATGACACTGTCAAATCTTCTGCCCTGGACCAGAAACTTCAGGTCTCTCAGACGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GACTGTGACACTTGGAGGCCCAACGGAAGGTGGAGTTTTCAGTTCTaGATCTTTATTCTCAGGAGCAGATTCTGGGGTCTTGGGATGATT +
Preference number: 5 (lower is better)
Translates to: DCDTWRPNGRWSFQF*IFILRSRFWGLGMI
Trigger: AATCATCCCAAGACCCCAGAATCTGCTCCTGAGAATAAAGATTCAGAACTGAAAACTCCACCTTCCGTTGGGCCTCCAAGTGTCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp GTTCCAGGCGGTTTTTCGCTATTCCCTCTTTGTCAGCTTTCTCTCTaGTCAGTTTATTACAACTCCTGGGCTTTTCAGGGCTTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: VPGGFSLFPLCQLSL*SVYYNSWAFQGFAL
Trigger: GAGAGCAAAGCCCTGAAAAGCCCAGGAGTTGTAATAAACTGAGCAGAGAGAAAGCTGACAAAGAGGGAATAGCGAAAAACCGCCTGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAGTCATCAGTGACATCTaGAGGGGGTTTGCCTACCTC +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGVISDI*RGFAYL
Trigger: GAGGTAGGCAAACCCCCTCAAGATGTCACTGATGAC...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTTCAGACTTGCAGATTaGTCCACTGCTAACCTGGAG +
Preference number: 5 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLFRLAD*STANLE
Trigger: CTCCAGGTTAGCAGTGGACAAATCTGCAAGTCTGAA...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp AGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGCTCAACACTGATTTCTaGGGACGAATTCTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: RVCNVCLHTPRHPECHSLLNTDF*GRILCG
Trigger: TCCACAGAGAATTCGTCCCAAGAAATCAGTGTTGAG...CAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp GAATTCTCTGTGGAGGGAATCTTGCTTAGGTCAGAAGTACATGACTaGGGAGGAGTGGAATGGGGTTTCTCACTCTGCTTTTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: EFSVEGILLRSEVHD*GGVEWGFSLCFSSC
Trigger: ACAGGAAGAAAAGCAGAGTGAGAAACCCCATTCCACTCCTCCTCAGTCATGTACTTCTGACCTAAGCAAGATTCCCTCCACAGAGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp ACTTTCTTGTTTGTGTTTCGCTTGCGGCGTGATCGGGTTGTTTTCTaGCGCCCTTTGTCTTTCCGAACAAGAGTGACTTCCACTTCTTTA +
Preference number: 5 (lower is better)
Translates to: TFLFVFRLRRDRVVF*RPLSFRTRVTSTSL
Trigger: TAAAGAAGTGGAAGTCACTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp GGCACAGATGCTTTGGTTGGAGTCCTTTCCTCAACACTGATTTCTTaGGACGAATTCTCTGTGGAGGGAATCTTGCTTAGGTCAGAAGTA +
Preference number: 5 (lower is better)
Translates to: GTDALVGVLSSTLIS*DEFSVEGILLRSEV
Trigger: TACTTCTGACCTAAGCAAGATTCCCTCCACAGAGAATTCGTCCCAAGAAATCAGTGTTGAGGAAAGGACTCCAACCAAAGCATCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGCTTGGCTGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAAAGTCTCTGATGTCTaGACCAGATTTCTCCATGCA +
Preference number: 5 (lower is better)
Translates to: CLAGLSFVFTAEPWEDSLKVSDV*TRFLHA
Trigger: TGCATGGAGAAATCTGGTCAAGACATCAGAGACTTT...CAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCAGCCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGTTTGCTCTTCAACTGTAAACTGTACATCCCGGTGAATCAAAGACGGTGGCAGCTTGAATGGAATCAGTaGTGCTGTTTGCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: CLLFNCKLYIPVNQRRWQLEWNQ*CCLLPQ
Trigger: CTGAGGGAGCAAACAGCACAACTGATTCCATTCAAG...CTGCCACCGTCTTTGATTCACCGGGATGTACAGTTTACAGTTGAAGAGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACCTGAACAGGGGTCTTaGAACGCTTGCTTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIPEQGS*NACFCL
Trigger: CAAACAAAAGCAAGCGTTCAAAGACCCCTGTTCAGG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACATGGTCACCCATGGTaGCATAGACGCTCCTTACAT +
Preference number: 5 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTHGHPW*HRRSLH
Trigger: ATGTAAGGAGCGTCTATGCAACCATGGGTGACCATG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATCTTTCTCTGGTTCCTaGTCTGGATCAACTGGATCA +
Preference number: 5 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPSFSGS*SGSTGS
Trigger: TGATCCAGTTGATCCAGACAAGGAACCAGAGAAAGA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAACTCTCACCTTGAGCTaGGTTGGATTCAGGGACATG +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGTLTLS*VGFRDM
Trigger: CATGTCCCTGAATCCAACCAAGCTCAAGGTGAGAGT...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp ACCTTTACCACAGGCCCATATCGGCAGAAATGTCGTGTTAAATACTaGTCTGACACATTCGAAGAAAGCCCATCTAGCCACACGCAGTTT +
Preference number: 5 (lower is better)
Translates to: TFTTGPYRQKCRVKY*SDTFEESPSSHTQF
Trigger: AAACTGCGTGTGGCTAGATGGGCTTTCTTCGAATGTGTCAGATCAGTATTTAACACGACATTTCTGCCGATATGGGCCTGTGGTAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375759.8
ENST00000442985.1
ENST00000673875.1
CDS TCA 90 bp ACTGGGAGAACCACCAGTCCTTTCAGAATCTTCGCTGATTTGGCGTaGACTTCTGTAATTCCGTTCTCGCTTGGTGCAGATATCAAAATC +
Preference number: 5 (lower is better)
Translates to: TGRTTSPFRIFADLA*TSVIPFSLGADIKI
Trigger: GATTTTGATATCTGCACCAAGCGAGAACGGAATTACAGAAGTTCACGCCAAATCAGCGAAGATTCTGAAAGGACTGGTGGTTCTCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CGTGTGAGCTCCATAAATCTGCTATGGAACAGAACTACTGGTTCTTaGATGGAATCAGTTGTGCTGTTTGCTCCCTCAGATGTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RVSSINLLWNRTTGS*MESVVLFAPSDVCF
Trigger: GAAGCAGACATCTGAGGGAGCAAACAGCACAACTGATTCCATTCAAGAACCAGTAGTTCTGTTCCATAGCAGATTTATGGAGCTCACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CAGGTAGCTGGCAGAAGAGGAAATATCCTCTACAATTCCAACGAATaGGGAAGGCACAGTTGCTCGCCAATAGTTCACTTTTGTAGCCAT +
Preference number: 5 (lower is better)
Translates to: QVAGRRGNILYNSNE*GRHSCSPIVHFCSH
Trigger: ATGGCTACAAAAGTGAACTATTGGCGAGCAACTGTGCCTTCCTCATTCGTTGGAATTGTAGAGGATATTTCCTCTTCTGCCAGCTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438066.1
ENST00000471538.1
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGAACGCGGCCATATCGTTaGAAATGCTCGATGATCTTC +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGTRPYR*KCSMIF
Trigger: GAAGATCATCGAGCATTTCAAACGATATGGCCGCGT...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGCTTTCTGTGCACTTTaGATGTCCACAAAATCCACA +
Preference number: 5 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPAFCAL*MSTKST
Trigger: TGTGGATTTTGTGGACATCAAAAGTGCACAGAAAGC...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCATTTCCAAAACCCAGCTaGAGGCGATTATTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: VLPALRVCNVCLHTPRHPFPKPS*RRLFPR
Trigger: TCTTGGAAATAATCGCCTCAAGCTGGGTTTTGGAAA...TGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACAAGTGAACAGGACTTaGACTTCGTTCAATCGGCCT +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGQVNRT*TSFNRP
Trigger: AGGCCGATTGAACGAAGTCAAAGTCCTGTTCACTTG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp GCGTTAAGAGTCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACTCTGGACTGCTTTTCTaGACCTCTGGTTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: ALRVCNVCLHTPRHPECHSGLLF*TSGFCF
Trigger: AAAGCAAAAACCAGAGGTCAAGAAAAGCAGTCCAGA...GTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATACAATTCCTGCCTCTCTaGCTCTTCTTCTTTATGGTC +
Preference number: 5 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIQFLPL*LFFFMV
Trigger: GACCATAAAGAAGAAGAGCAAGAGAGGCAGGAATTG...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp TGTTTGCTCCCTCAGATGTCTGCTTCCCATAGATCCTACCAGAAATaGAGTCAGAATCTTCCTCTTTTCTCTCTAGATGCTGCAATCGCT +
Preference number: 5 (lower is better)
Translates to: CLLPQMSASHRSYQK*SQNLPLFSLDAAIA
Trigger: AGCGATTGCAGCATCTAGAGAGAAAAGAGGAAGATTCTGACTTCATTTCTGGTAGGATCTATGGGAAGCAGACATCTGAGGGAGCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp AAAGACAATCGAGAACTTTCATATAATGCAGAGGCTCTGGGTGAGTaGGATTTGTGTTCACCATCTTCGTCAGAATCAGAAGGCACCTCA +
Preference number: 5 (lower is better)
Translates to: KDNRELSYNAEALGE*DLCSPSSSESEGTS
Trigger: TGAGGTGCCTTCTGATTCTGACGAAGATGGTGAACACAAATCCCACTCACCCAGAGCCTCTGCATTATATGAAAGTTCTCGATTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACACCTTCAGATCCCCTCTaGGGAAGAATTTTGACACTT +
Preference number: 5 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTPSDPL*GRILTL
Trigger: AAGTGTCAAAATTCTTCCCAAGAGGGGATCTGAAGG...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACATTTTTCTTGGTCCTCTaGCTGCCGAAAGAATACCAG +
Preference number: 5 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTFFLVL*LPKEYQ
Trigger: CTGGTATTCTTTCGGCAGCAAGAGGACCAAGAAAAA...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TCTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTTGTTGTTTCGAAAATTaGCAAATCGGGAGTCCCAAT +
Preference number: 5 (lower is better)
Translates to: SAMCVYTHQDIQSVTACLCCFEN*QIGSPN
Trigger: ATTGGGACTCCCGATTTGCAAATTTTCGAAACAACA...AAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATATTGGCTTTTTATCCTTaGCAGCAACTGGAGGATCAA +
Preference number: 5 (lower is better)
Translates to: WVVLCFYCRALGRFTEVILAFYP*QQLEDQ
Trigger: TTGATCCTCCAGTTGCTGCAAAGGATAAAAAGCCAA...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGATCTGTGGAGGGAATCTaGCTTAGGTCAGAAGTACAT +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGSVEGI*LRSEVH
Trigger: ATGTACTTCTGACCTAAGCAAGATTCCCTCCACAGA...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp AGTTCTGAATCTTTATTCTCAGGAGCAGATTCTGGGGTCTTGGGATaGTTCTCTGTATCTTCCTGTTTCTCAACCTCTTTGGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SSESLFSGADSGVLG*FSVSSCFSTSLGFW
Trigger: CCAGAAACCCAAAGAGGTTGAGAAACAGGAAGATACAGAGAATCATCCCAAGACCCCAGAATCTGCTCCTGAGAATAAAGATTCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TGGGTTGTCCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTGAGGTGATAGTGTCATTATCAAGCTaGGCTTTCAACTTTTCCACA +
Preference number: 5 (lower is better)
Translates to: WVVLCFYCRALGRFTEVIVSLSS*AFNFST
Trigger: TGTGGAAAAGTTGAAAGCCAAGCTTGATAATGACAC...TATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGGACAACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGCTTGTATCTCAGAGTaGTTTGTCACTGGAGGTGCT +
Preference number: 5 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLACISE*FVTGGA
Trigger: AGCACCTCCAGTGACAAACAACTCTGAGATACAAGC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CCCTTCGTTCCTCTCTTCTTTCGGCTAACATTTCATAAAAGTCTCTaGTGTCTTGACCAGATTTCTCCATGCAGTGATAAAAAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PFVPLFFRLTFHKSL*CLDQISPCSDKKPA
Trigger: AGCTGGCTTTTTATCACTGCATGGAGAAATCTGGTCAAGACATCAGAGACTTTTATGAAATGTTAGCCGAAAGAAGAGAGGAACGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS-3UTR CAA 90 bp TATACACACATCCCAAGTTCTGCATATCCCACCAAGAGAAAACCTTTCTGTTTGGGAAGATTCTGGACCTaGATGCCAAAACTTTTACGG +
Preference number: 5 (lower is better)
Translates to: YTHIPSSAYPTKRKPFCLGRFWT*MPKLLR
Trigger: CCGTAAAAGTTTTGGCATCAAGGTCCAGAATCTTCC...CAAACAGAAAGGTTTTCTCTTGGTGGGATATGCAGAACTTGGGATGTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGACTGTCTTTTCATTTTTaGTATAGCGCTCCAAACGAG +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGLSFHF*YSAPNE
Trigger: CTCGTTTGGAGCGCTATACAAAAAATGAAAAGACAG...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CAGAAGTTTGAAGTCCTTCCTGCGTTAAGAGTCTGCAATGTGTGTCTACACACAAGATGCTGCAATCGCTaGGAATCTTGTTCAAAGATT +
Preference number: 5 (lower is better)
Translates to: QKFEVLPALRVCNVCLHTRCCNR*ESCSKI
Trigger: AATCTTTGAACAAGATTCCAAGCGATTGCAGCATCT...TGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS-3UTR CAA 90 bp CTTGGGCTAAAGCATTATGTAAACATACAAGGTAGCAGCACCACTCCTAGAGGATGTTTCTCAACCTCTTaGGGTTTCTGGTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LGLKHYVNIQGSSTTPRGCFSTS*GFWSFS
Trigger: AGAAAAAGACCAGAAACCCAAAGAGGTTGAGAAACA...TCCTCTAGGAGTGGTGCTGCTACCTTGTATGTTTACATAATGCTTTAGCCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 90 bp CTGTTTGGGAAACTCACATCAAATCTGCCAGCATCCTGTTTCATCTaGGAGTCCCAACGATTTAGTTCATCTTCAGAATTCAAGACAGAT +
Preference number: 5 (lower is better)
Translates to: LFGKLTSNLPASCFI*ESQRFSSSSEFKTD
Trigger: ATCTGTCTTGAATTCTGAAGATGAACTAAATCGTTGGGACTCTCAGATGAAACAGGATGCTGGCAGATTTGATGTGAGTTTCCCAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TCGTACAGACCTTTTTCGAAGGCTATCTCTCTTAATTATGCTGTTTaGGAAACTCACATCAAATCTGCCAGCATCCTGTTTCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: SYRPFSKAISLNYAV*ETHIKSASILFHLR
Trigger: TCTCAGATGAAACAGGATGCTGGCAGATTTGATGTGAGTTTCCCAAACAGCATAATTAAGAGAGATAGCCTTCGAAAAAGGTCTGTACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TTTTCAGTTCTGAATCTTTATTCTCAGGAGCAGATTCTGGGGTCTTaGGATGATTCTCTGTATCTTCCTGTTTCTCAACCTCTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: FSVLNLYSQEQILGS*DDSLYLPVSQPLWV
Trigger: AACCCAAAGAGGTTGAGAAACAGGAAGATACAGAGAATCATCCCAAGACCCCAGAATCTGCTCCTGAGAATAAAGATTCAGAACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 90 bp TTCTCAACCTCTTTGGGTTTCTGGTCTTTTTCTTTTTCTTTCTGTTaGATCCGTGTGAGCTCCATAAATCTGCTATGGAACAGAACTACT +
Preference number: 5 (lower is better)
Translates to: FSTSLGFWSFSFSFC*IRVSSINLLWNRTT
Trigger: AGTAGTTCTGTTCCATAGCAGATTTATGGAGCTCACACGGATGCAACAGAAAGAAAAAGAAAAAGACCAGAAACCCAAAGAGGTTGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 90 bp TCCACATTCATAAATATTTCCAGCCCTAAGTATGAATCAGGTAGCTaGCAGAAGAGGAAATATCCTCTACAATTCCAACGAATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: STFINISSPKYESGS*QKRKYPLQFQRMRK
Trigger: CTTCCTCATTCGTTGGAATTGTAGAGGATATTTCCTCTTCTGCCAGCTACCTGATTCATACTTAGGGCTGGAAATATTTATGAATGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438066.1
ENST00000471538.1
CDS TCA 90 bp GCTTTACAAACGCTAGCAATATCACAGTATTGCAGAAACGCATACTaGGGAACTCCATTTACTTTCTTAATGTCAATATCCACAATTTCT +
Preference number: 5 (lower is better)
Translates to: ALQTLAISQYCRNAY*GTPFTFLMSISTIS
Trigger: AGAAATTGTGGATATTGACATTAAGAAAGTAAATGGAGTTCCTCAGTATGCGTTTCTGCAATACTGTGATATTGCTAGCGTTTGTAAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375759.8
ENST00000442985.1
ENST00000673875.1
CDS CCA 72 bp TGCCCACCCAGAGATGCCTGGTTTCCCGGACCATGCTaGGCGGCGTGCCGGCGACCGCCGCTGCTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: CPPRDAWFPGPC*AACRRPPLLAP
Trigger: GGGAGCCAGCAGCGGCGGTCGCCGGCACGCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GCAGTTTGCTGGGCAGAGCAGGAGGGTGGTGGGGCGTaGGCGTGGACCCCAGGTTGGCCGGCTGAAGGACCT +
Preference number: 6 (lower is better)
Translates to: AVCWAEQEGGGA*AWTPGWPAEGP
Trigger: AGGTCCTTCAGCCGGCCAACCTGGGGTCCACGCTCACGCCCCACCACCCTCCTGCTCTGCCCAGCAAACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GCCGGCGTGTCTTTGGAGGCCTTCCCCTCCGAGGGGTaGTGGGAACCGCTGCAGCCTCCTGAAGCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: AGVSLEAFPSEG*WEPLQPPEALA
Trigger: AGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CCTTGGCCTCGTTCTCCTCCTCTTCATCGGCTCGCCGGCGTGTCTTaGGAGGCCTTCCCCTCCGAGGGGTGGTGGGAACCGCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: PWPRSPPLHRLAGVS*EAFPSEGWWEPLQP
Trigger: AGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGAGCCGATGAAGAGGAGGAGAACGAGGCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TCCCGCACGTTCTCGGGTAAGTTGCCCACCCAGAGATaGCTGGTTTCCCGGACCATGCTGGGCGGCGTGCCG +
Preference number: 6 (lower is better)
Translates to: SRTFSGKLPTQR*LVSRTMLGGVP
Trigger: CGGCACGCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAACTTACCCGAGAACGTGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GGTGGCACCTTCACCACCCCATCCGCGGCCCTGGGCTaGTCGCTGACTGCCGTCACATGTGGATGCACCATG +
Preference number: 6 (lower is better)
Translates to: GGTFTTPSAALG*SLTAVTCGCTM
Trigger: CATGGTGCATCCACATGTGACGGCAGTCAGCGAGCAGCCCAGGGCCGCGGATGGGGTGGTGAAGGTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GGGTCCCCTTTGCCTCCTGGGACACTTGAGGCATCTTaGTGCTTGGTGGCTGGCCGGGCTGACCGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: GSPLPPGTLEAS*CLVAGRADRAG
Trigger: CCCAGCTCGGTCAGCCCGGCCAGCCACCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCAAAGGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GCACGTTCTCGGGTAAGTTGCCCACCCAGAGATGCCTaGTTTCCCGGACCATGCTGGGCGGCGTGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: ARSRVSCPPRDA*FPGPCWAACRR
Trigger: TCGCCGGCACGCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAACTTACCCGAGAACGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GGCGTGTCTTTGGAGGCCTTCCCCTCCGAGGGGTGGTaGGAACCGCTGCAGCCTCCTGAAGCTCTCGCTCCA +
Preference number: 6 (lower is better)
Translates to: GVSLEAFPSEGW*EPLQPPEALAP
Trigger: TGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTTCTCCTCCTCTTCATCGGCTCGCCGGCGTGTCTTTaGAGGCCTTCCCCTCCGAGGGGTGGTGGGAACCGC +
Preference number: 6 (lower is better)
Translates to: VLLLFIGSPACL*RPSPPRGGGNR
Trigger: GCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGAGCCGATGAAGAGGAGGAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp ACTTCTGTAGGCAGTTTGCTGGGCAGAGCAGGAGGGTaGTGGGGCGTGAGCGTGGACCCCAGGTTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: TSVGSLLGRAGG*WGVSVDPRLAG
Trigger: GCCGGCCAACCTGGGGTCCACGCTCACGCCCCACCACCCTCCTGCTCTGCCCAGCAAACTGCCTACAGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CGTTCTCCTCCTCTTCATCGGCTCGCCGGCGTGTCTTaGGAGGCCTTCCCCTCCGAGGGGTGGTGGGAACCG +
Preference number: 6 (lower is better)
Translates to: RSPPLHRLAGVS*EAFPSEGWWEP
Trigger: CGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCAAAGACACGCCGGCGAGCCGATGAAGAGGAGGAGAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CCTTTGCCTCCTGGGACACTTGAGGCATCTTGCTGCTaGGTGGCTGGCCGGGCTGACCGAGCTGGGAGGGCG +
Preference number: 6 (lower is better)
Translates to: PLPPGTLEASCC*VAGRADRAGRA
Trigger: CGCCCTCCCAGCTCGGTCAGCCCGGCCAGCCACCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCAAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TCCCCTTTGCCTCCTGGGACACTTGAGGCATCTTGCTaGTTGGTGGCTGGCCGGGCTGACCGAGCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SPLPPGTLEASC*LVAGRADRAGR
Trigger: CCTCCCAGCTCGGTCAGCCCGGCCAGCCACCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCAAAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp GTCCAGCTGGGAGGCGAGGCTGCTCTACTCCCGTCTGGGTCCCCTTaGCCTCCTGGGACACTTGAGGCATCTTGCTGCTTGGTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: VQLGGEAALLPSGSP*PPGTLEASCCLVAG
Trigger: GCCAGCCACCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCAAAGGGGACCCAGACGGGAGTAGAGCAGCCTCGCCTCCCAGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GTGCCTCCCTGGGTGACAGGCGTGGACACCGAGAGGTaGATGGGCTCGGGCTTCTCCAAGGATGGCCTATCG +
Preference number: 6 (lower is better)
Translates to: VPPWVTGVDTER*MGSGFSKDGLS
Trigger: CGATAGGCCATCCTTGGAGAAGCCCGAGCCCATTCACCTCTCGGTGTCCACGCCTGTCACCCAGGGAGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GTCCCTGTCCTCTGGGGCAAGGCCCTCTGGTGCATCTaGCTTATAGGCAGCAGAGGCAGAGGCCTCAGCGAG +
Preference number: 6 (lower is better)
Translates to: VPVLWGKALWCI*LIGSRGRGLSE
Trigger: CTCGCTGAGGCCTCTGCCTCTGCTGCCTATAAGGCAGATGCACCAGAGGGCCTTGCCCCAGAGGACAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp CGCTGTGACGGTCACTGCACTTGCTGTGGCATTCACTaGACTCGCAGCGGCATTGACTGTGCCTGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RCDGHCTCCGIH*TRSGIDCAWGG
Trigger: GCCGCCCCAGGCACAGTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGACCGTCACAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GTCTCCACCGTCATCCTTCGGGCAACCCCTTCCAGCTaGGTTGCCTCCAGCCGCATCCTCTGGGCGATCCTT +
Preference number: 6 (lower is better)
Translates to: VSTVILRATPSS*VASSRILWAIL
Trigger: AAGGATCGCCCAGAGGATGCGGCTGGAGGCAACGCAGCTGGAAGGGGTTGCCCGAAGGATGACGGTGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GGCATTCACTGCACTCGCAGCGGCATTGACTGTGCCTaGGGCGGCATTCACTGTGCCCACCGTGGCGTTCAC +
Preference number: 6 (lower is better)
Translates to: GIHCTRSGIDCA*GGIHCAHRGVH
Trigger: GTGAACGCCACGGTGGGCACAGTGAATGCCGCCCCAGGCACAGTCAATGCCGCTGCGAGTGCAGTGAATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGCACTGGGATGCCTGCAGCCAGCATGACTGTGGCGTaGGTGGAGAGCGCCGTAGATGCAGTACTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GTGMPAASMTVA*VESAVDAVLLG
Trigger: CCCCAGCAGTACTGCATCTACGGCGCTCTCCACCAACGCCACAGTCATGCTGGCTGCAGGCATCCCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp AATCTGTCTCCACCGTCATCCTTCGGGCAACCCCTTCCAGCTGCGTaGCCTCCAGCCGCATCCTCTGGGCGATCCTTAGTGGGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: NLSPPSSFGQPLPAA*PPAASSGRSLVGAL
Trigger: GAGGGCCCCCACTAAGGATCGCCCAGAGGATGCGGCTGGAGGCAACGCAGCTGGAAGGGGTTGCCCGAAGGATGACGGTGGAGACAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp ATGAACTGGGGCACTGGGATGCCTGCAGCCAGCATGACTGTGGCGTaGGTGGAGAGCGCCGTAGATGCAGTACTGCTGGGGTGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: MNWGTGMPAASMTVA*VESAVDAVLLGWLA
Trigger: GGCAAGCCACCCCAGCAGTACTGCATCTACGGCGCTCTCCACCAACGCCACAGTCATGCTGGCTGCAGGCATCCCAGTGCCCCAGTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TGGAGGCCTTCCCCTCCGAGGGGTGGTGGGAACCGCTaGAGCCTCCTGAAGCTCTCGCTCCAATCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: WRPSPPRGGGNR*SLLKLSLQSLS
Trigger: AGAAAGAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGGAAGGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp AGGCTTGTCCCTGTCCTCTGGGGCAAGGCCCTCTGGTaGATCTGCCTTATAGGCAGCAGAGGCAGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: RLVPVLWGKALW*ICLIGSRGRGL
Trigger: GAGGCCTCTGCCTCTGCTGCCTATAAGGCAGATGCACCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GAGGCGAGGCTGCTCTACTCCCGTCTGGGTCCCCTTTaGCTCCTGGGACACTTGAGGCATCTTGCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: EARLLYSRLGPL*LLGHLRHLAAW
Trigger: CCAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCAAAGGGGACCCAGACGGGAGTAGAGCAGCCTCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTTGCTCTCTGCCTGGGAAAACGAGGCCCCGGGAGTTaGAGGCTTGGCATCCAGATAAGGCGGCTGGTCACC +
Preference number: 6 (lower is better)
Translates to: VALCLGKRGPGS*RLGIQIRRLVT
Trigger: GGTGACCAGCCGCCTTATCTGGATGCCAAGCCTCCAACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GAGCCGATGGCCGCAGCCAGCTCTGTTTCACTTGCTTaGTGTGCAGGCTTGTCCCTGTCCTCTGGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: EPMAAASSVSLA*CAGLSLSSGAR
Trigger: CCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTGGCTGCGGCCATCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TTGGTGGAGAGCGCCGTAGATGCAGTACTGCTGGGGTaGCTTGCCCTTGGGAATGAGGATGGCCCGGGTCCA +
Preference number: 6 (lower is better)
Translates to: LVESAVDAVLLG*LALGNEDGPGP
Trigger: TGGACCCGGGCCATCCTCATTCCCAAGGGCAAGCCACCCCAGCAGTACTGCATCTACGGCGCTCTCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp AGTCAACAGCCGTTCCAAACATGGCGCGGGAAGGGGTaGAAGACAAGCCAGCGCGACGCCGTCCAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: SQQPFQTWRGKG*KTSQRDAVQPH
Trigger: ATGAGGCTGGACGGCGTCGCGCTGGCTTGTCTTCCACCCCTTCCCGCGCCATGTTTGGAACGGCTGTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673875.1
CDS CCA 72 bp CTCCACACGGGATCCAGTCAACAGCCGTTCCAAACATaGCGCGGGAAGGGGTGGAAGACAAGCCAGCGCGAC +
Preference number: 6 (lower is better)
Translates to: LHTGSSQQPFQT*RGKGWKTSQRD
Trigger: GTCGCGCTGGCTTGTCTTCCACCCCTTCCCGCGCCATGTTTGGAACGGCTGTTGACTGGATCCCGTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673875.1
CDS CAA 72 bp CGTTGCTCTCTGCCTGGGAAAACGAGGCCCCGGGAGTaGGAGGCTTGGCATCCAGATAAGGCGGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: RCSLPGKTRPRE*EAWHPDKAAGH
Trigger: GTGACCAGCCGCCTTATCTGGATGCCAAGCCTCCAACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGAGCCGATGGCCGCAGCCAGCTCTGTTTCACTTGCTaGGTGTGCAGGCTTGTCCCTGTCCTCTGGGGCAAG +
Preference number: 6 (lower is better)
Translates to: GADGRSQLCFTC*VCRLVPVLWGK
Trigger: CTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTGGCTGCGGCCATCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGAGGCGAGGCTGCTCTACTCCCGTCTGGGTCCCCTTaGCCTCCTGGGACACTTGAGGCATCTTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: GGEAALLPSGSP*PPGTLEASCCL
Trigger: CAAGCAGCAAGATGCCTCAAGTGTCCCAGGAGGCAAAGGGGACCCAGACGGGAGTAGAGCAGCCTCGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp GGCGACCGCCATCCCTCAGGTGGCTTGAGTGTTTCTGCAGGTTCCTaGGCCTCGTTCTCCTCCTCTTCATCGGCTCGCCGGCGTGTCTTT +
Preference number: 6 (lower is better)
Translates to: GDRHPSGGLSVSAGS*ASFSSSSSARRRVF
Trigger: AAAGACACGCCGGCGAGCCGATGAAGAGGAGGAGAACGAGGCCAAGGAACCTGCAGAAACACTCAAGCCACCTGAGGGATGGCGGTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CCGATGGCCGCAGCCAGCTCTGTTTCACTTGCTTGGTGTGCAGGCTaGTCCCTGTCCTCTGGGGCAAGGCCCTCTGGTGCATCTGCCTTA +
Preference number: 6 (lower is better)
Translates to: PMAAASSVSLAWCAG*SLSSGARPSGASAL
Trigger: TAAGGCAGATGCACCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTGGCTGCGGCCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp GGTCACCGGGTCACTTTCAATGATGGAATGCACCCTGAACCTGGCTaGAGGCTCCTCATCCACCGGTGCTGGCTGGGGAGGTGGGGGAAG +
Preference number: 6 (lower is better)
Translates to: GHRVTFNDGMHPEPG*RLLIHRCWLGRWGK
Trigger: CTTCCCCCACCTCCCCAGCCAGCACCGGTGGATGAGGAGCCTCAAGCCAGGTTCAGGGTGCATTCCATCATTGAAAGTGACCCGGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AGCCTCCTCTCAGAATCACTCGGCAACCTCTCTGCCTaGGAGGGAGACGCTCCAGGACTCTGTGGACGTCGC +
Preference number: 6 (lower is better)
Translates to: SLLSESLGNLSA*EGDAPGLCGRR
Trigger: GCGACGTCCACAGAGTCCTGGAGCGTCTCCCTCTCAGGCAGAGAGGTTGCCGAGTGATTCTGAGAGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS TCA 72 bp CCCCTCCGAGGGGTGGTGGGAACCGCTGCAGCCTCCTaGAGCTCTCGCTCCAATCTCTTTCTGGTCACTCTT +
Preference number: 6 (lower is better)
Translates to: PLRGVVGTAAAS*SSRSNLFLVTL
Trigger: AAGAGTGACCAGAAAGAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCCACCACCCCTCGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GAGGCCTCAGCGAGCTTTGCGATGTGTTCCACGGCCTaGTCCAGCTCCATCTGCTTGGCTAACTGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: EASASFAMCSTA*SSSICLANWVA
Trigger: AGCCACCCAGTTAGCCAAGCAGATGGAGCTGGAGCAGGCCGTGGAACACATCGCAAAGCTCGCTGAGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp AGATGCAGCAGTAACCGCACCCGCTGTGACGGTCACTaGACTTGCTGTGGCATTCACTGCACTCGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: RCSSNRTRCDGH*TCCGIHCTRSG
Trigger: GCCGCTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGACCGTCACAGCGGGTGCGGTTACTGCTGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TGTCACCGTGCCTGTTGTGGCCGTTACACCACCAGATaGAGCAGTAACCGCACCCGCTGTGACGGTCACTGC +
Preference number: 6 (lower is better)
Translates to: CHRACCGRYTTR*SSNRTRCDGHC
Trigger: GCAGTGACCGTCACAGCGGGTGCGGTTACTGCTGCATCTGGTGGTGTAACGGCCACAACAGGCACGGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CTGCCTGGGAAAACGAGGCCCCGGGAGTTGGAGGCTTaGCATCCAGATAAGGCGGCTGGTCACCTGATGAAC +
Preference number: 6 (lower is better)
Translates to: LPGKTRPRELEA*HPDKAAGHLMN
Trigger: GTTCATCAGGTGACCAGCCGCCTTATCTGGATGCCAAGCCTCCAACTCCCGGGGCCTCGTTTTCCCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGGGTGGTAGGTGCGGATGTCGCCGTACCGGTACTCTaGAAACAGCTCCCCGCTGGAGTGCACAATCTGCAC +
Preference number: 6 (lower is better)
Translates to: GVVGADVAVPVL*KQLPAGVHNLH
Trigger: GTGCAGATTGTGCACTCCAGCGGGGAGCTGTTTCAAGAGTACCGGTACGGCGACATCCGCACCTACCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CTCCTCAGCAGCCTTGGGTTCCATGGAGCTCTCTTTCACGCCTATTaGGGGGCCCACCTCAGTGGTGGCCTCAGGACGTGTAGCATCCAC +
Preference number: 6 (lower is better)
Translates to: LLSSLGFHGALFHAY*GAHLSGGLRTCSIH
Trigger: GTGGATGCTACACGTCCTGAGGCCACCACTGAGGTGGGCCCCCAAATAGGCGTGAAAGAGAGCTCCATGGAACCCAAGGCTGCTGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp ATTGATGATGGAGCCGATGGCCGCAGCCAGCTCTGTTTCACTTGCTaGGTGTGCAGGCTTGTCCCTGTCCTCTGGGGCAAGGCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: IDDGADGRSQLCFTC*VCRLVPVLWGKALW
Trigger: CCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAAACAGAGCTGGCTGCGGCCATCGGCTCCATCATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp TCTGGGACCTTGGCGACCGCCATCCCTCAGGTGGCTTaGGTGTTTCTGCAGGTTCCTTGGCCTCGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: SGTLATAIPQVA*VFLQVPWPRSP
Trigger: AGGAGAACGAGGCCAAGGAACCTGCAGAAACACTCAAGCCACCTGAGGGATGGCGGTCGCCAAGGTCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp CTGGGTACTGTCAGGCTCTGGATCTACGTTGCTCTCTaGCTGGGAAAACGAGGCCCCGGGAGTTGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: LGTVRLWIYVAL*LGKRGPGSWRL
Trigger: AAGCCTCCAACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAGTACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp AGCAGTAACCGCACCCGCTGTGACGGTCACTGCACTTaGTGTGGCATTCACTGCACTCGCAGCGGCATTGAC +
Preference number: 6 (lower is better)
Translates to: SSNRTRCDGHCT*CGIHCTRSGID
Trigger: GTCAATGCCGCTGCGAGTGCAGTGAATGCCACAGCAAGTGCAGTGACCGTCACAGCGGGTGCGGTTACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TTGACGGCGCAATCACTGCCCCTGCCATTGTCACCGTaGCTGTTGTGGCCGTTACACCACCAGATGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LTAQSLPLPLSP*LLWPLHHQMQQ
Trigger: CTGCTGCATCTGGTGGTGTAACGGCCACAACAGGCACGGTGACAATGGCAGGGGCAGTGATTGCGCCGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TGGGCCAGGACGTTGTTGCCAGAGACGAAGTGGAGCTaGACAGCAGCTGTGTCATTCTTGAGGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: WARTLLPETKWS*TAAVSFLRASR
Trigger: CCTGCTGGCCCTCAAGAATGACACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAACAACGTCCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTACTGTCAGGCTCTGGATCTACGTTGCTCTCTGCCTaGGAAAACGAGGCCCCGGGAGTTGGAGGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: VLSGSGSTLLSA*ENEAPGVGGLA
Trigger: TGCCAAGCCTCCAACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TTGGGGTCCACCACCAGCTGCAGTTTTCTGGGACCTTaGCGACCGCCATCCCTCAGGTGGCTTGAGTGTTTC +
Preference number: 6 (lower is better)
Translates to: LGSTTSCSFLGP*RPPSLRWLECF
Trigger: GAAACACTCAAGCCACCTGAGGGATGGCGGTCGCCAAGGTCCCAGAAAACTGCAGCTGGTGGTGGACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GCCTTGGGTTCCATGGAGCTCTCTTTCACGCCTATTTaGGGGCCCACCTCAGTGGTGGCCTCAGGACGTGTA +
Preference number: 6 (lower is better)
Translates to: ALGSMELSFTPI*GPTSVVASGRV
Trigger: TACACGTCCTGAGGCCACCACTGAGGTGGGCCCCCAAATAGGCGTGAAAGAGAGCTCCATGGAACCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TGGGGCGGCATTCACTGTGCCCACCGTGGCGTTCACTaGAGTGGTGAGAACATTCACTGGCCCCGTAAGAAC +
Preference number: 6 (lower is better)
Translates to: WGGIHCAHRGVH*SGENIHWPRKN
Trigger: GTTCTTACGGGGCCAGTGAATGTTCTCACCACTCCAGTGAACGCCACGGTGGGCACAGTGAATGCCGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTTCGATCTGCTGGGATGCTGGGCCCCGAGGGGACATaGTTGACTTCTGTAGGCAGTTTGCTGGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: VRSAGMLGPEGT*LTSVGSLLGRA
Trigger: TGCTCTGCCCAGCAAACTGCCTACAGAAGTCAACCATGTCCCCTCGGGGCCCAGCATCCCAGCAGATCGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTGGCTCAGGGACACAGTCTGGGTGATGCTGTGGGGTaGCATGATGACAGACTGCTCTGGGTGGATGCTGGA +
Preference number: 6 (lower is better)
Translates to: VAQGHSLGDAVG*HDDRLLWVDAG
Trigger: TCCAGCATCCACCCAGAGCAGTCTGTCATCATGCCACCCCACAGCATCACCCAGACTGTGTCCCTGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TGTCGCCGTACCGGTACTCTTGAAACAGCTCCCCGCTaGAGTGCACAATCTGCACCCCATGGGTCACCACCA +
Preference number: 6 (lower is better)
Translates to: CRRTGTLETAPR*SAQSAPHGSPP
Trigger: TGGTGGTGACCCATGGGGTGCAGATTGTGCACTCCAGCGGGGAGCTGTTTCAAGAGTACCGGTACGGCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGGGCTGAGACTCAGGAGCAGCTTCGGCTTTCTGGTTaGCATCAGGCTCAGCATCTGCAGTGGCGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: GAETQEQLRLSG*HQAQHLQWRLA
Trigger: AGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAAACCAGAAAGCCGAAGCTGCTCCTGAGTCTCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CATCCCTCAGGTGGCTTGAGTGTTTCTGCAGGTTCCTaGGCCTCGTTCTCCTCCTCTTCATCGGCTCGCCGG +
Preference number: 6 (lower is better)
Translates to: HPSGGLSVSAGS*ASFSSSSSARR
Trigger: CCGGCGAGCCGATGAAGAGGAGGAGAACGAGGCCAAGGAACCTGCAGAAACACTCAAGCCACCTGAGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp AGCCTTGGGTTCCATGGAGCTCTCTTTCACGCCTATTaGGGGGCCCACCTCAGTGGTGGCCTCAGGACGTGT +
Preference number: 6 (lower is better)
Translates to: SLGFHGALFHAY*GAHLSGGLRTC
Trigger: ACACGTCCTGAGGCCACCACTGAGGTGGGCCCCCAAATAGGCGTGAAAGAGAGCTCCATGGAACCCAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CTGGATCTACGTTGCTCTCTGCCTGGGAAAACGAGGCCCCGGGAGTaGGAGGCTTGGCATCCAGATAAGGCGGCTGGTCACCTGATGAAC +
Preference number: 6 (lower is better)
Translates to: LDLRCSLPGKTRPRE*EAWHPDKAAGHLMN
Trigger: GTTCATCAGGTGACCAGCCGCCTTATCTGGATGCCAAGCCTCCAACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACGTAGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TGCTGGGGTGGCTTGCCCTTGGGAATGAGGATGGCCCGGGTCCACTaGGTCGAGGAGAATGAGCATCTAGCTTTGCAGCTGCCAAATGGG +
Preference number: 6 (lower is better)
Translates to: CWGGLPLGMRMARVH*VEENEHLALQLPNG
Trigger: CCCATTTGGCAGCTGCAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCGGGCCATCCTCATTCCCAAGGGCAAGCCACCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TTGAAATGCTCGATGATCTTCTCTTCCCGCACGTTCTCGGGTAAGTaGCCCACCCAGAGATGCCTGGTTTCCCGGACCATGCTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LKCSMIFSSRTFSGK*PTQRCLVSRTMLGG
Trigger: GCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAACTTACCCGAGAACGTGCGGGAAGAGAAGATCATCGAGCATTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp GGGAGACGCTCCAGGACTCTGTGGACGTCGCAAGTGAACAGGACTTaGACTTCGTTCAATCGGCCTCCTCTCATGGTCTCTGTCCCGGTC +
Preference number: 6 (lower is better)
Translates to: GRRSRTLWTSQVNRT*TSFNRPPLMVSVPV
Trigger: GACCGGGACAGAGACCATGAGAGGAGGCCGATTGAACGAAGTCAAAGTCCTGTTCACTTGCGACGTCCACAGAGTCCTGGAGCGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CAA 90 bp TACCAACGTGGAATGGGTGGCCACGTTCGCATAGCCTGCAGGAGCTaGAGGGCCTTTGGATGGAGGCTGCGATGCTGTGACAGAATCAGG +
Preference number: 6 (lower is better)
Translates to: YQRGMGGHVRIACRS*RAFGWRLRCCDRIR
Trigger: CCTGATTCTGTCACAGCATCGCAGCCTCCATCCAAAGGCCCTCAAGCTCCTGCAGGCTATGCGAACGTGGCCACCCATTCCACGTTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AAGTCTCCGCTCATAACGTCCTTCTCGTGCATGAAGTaGCGGTGGGGGACCATAAGCAGGCCCTCCACCACC +
Preference number: 6 (lower is better)
Translates to: KSPLITSFSCMK*RWGTISRPSTT
Trigger: GGTGGTGGAGGGCCTGCTTATGGTCCCCCACCGTCACTTCATGCACGAGAAGGACGTTATGAGCGGAGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS TCA 72 bp GGCGCTGATCCGCTGTGGGCCTTCGGTCTTCTGCCCTaGGTAACTCAGGAGCACAACCCCTTCAGAAGTGTT +
Preference number: 6 (lower is better)
Translates to: GADPLWAFGLLP*VTQEHNPFRSV
Trigger: AACACTTCTGAAGGGGTTGTGCTCCTGAGTTACTCAGGGCAGAAGACCGAAGGCCCACAGCGGATCAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GTAAAGCCTCCTCTCAGAATCACTCGGCAACCTCTCTaGCTGAGAGGGAGACGCTCCAGGACTCTGTGGACG +
Preference number: 6 (lower is better)
Translates to: VKPPLRITRQPL*LRGRRSRTLWT
Trigger: CGTCCACAGAGTCCTGGAGCGTCTCCCTCTCAGGCAGAGAGGTTGCCGAGTGATTCTGAGAGGAGGCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS GCA 72 bp ACCCGCAGGCATCATGGCAGCTTCTTTATCGGGGTCTaGTCCTGGGGGCAGGTCTACTTGTTCCAGCTGTTC +
Preference number: 6 (lower is better)
Translates to: TRRHHGSFFIGV*SWGQVYLFQLF
Trigger: GAACAGCTGGAACAAGTAGACCTGCCCCCAGGAGCAGACCCCGATAAAGAAGCTGCCATGATGCCTGCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp AAAGTGGCTGGGTACTGTCAGGCTCTGGATCTACGTTaGTCTCTGCCTGGGAAAACGAGGCCCCGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: KVAGYCQALDLR*SLPGKTRPREL
Trigger: CAACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAGTACCCAGCCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GGGCTGAGACTCAGGAGCAGCTTCGGCTTTCTGGTTTaGATCAGGCTCAGCATCTGCAGTGGCGTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: GLRLRSSFGFLV*IRLSICSGVWL
Trigger: AAGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAAACCAGAAAGCCGAAGCTGCTCCTGAGTCTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp CTGATTGGAGCCAGGGTTGGGAACGTTGATGATCCCTaGCGCCTGCTTGGCCTGCAGGTAAGTGATGAAGGC +
Preference number: 6 (lower is better)
Translates to: LIGARVGNVDDP*RLLGLQVSDEG
Trigger: GCCTTCATCACTTACCTGCAGGCCAAGCAGGCGGCAGGGATCATCAACGTTCCCAACCCTGGCTCCAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000487496.1
CDS GCA 72 bp GGAGGCGGAAGTTGCGGTGGGCTGAGATCACGCCATTaGACACCAGCCTGTAATCTCAGCACTTTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GGGSCGGLRSRH*TPACNLSTLEG
Trigger: GCCTTCCAAAGTGCTGAGATTACAGGCTGGTGTGCAATGGCGTGATCTCAGCCCACCGCAACTTCCGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673875.1
CDS CCA 72 bp CACCTGATGAACCTTCCTCAACACCCGCAGGCATCATaGCAGCTTCTTTATCGGGGTCTGCTCCTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: HLMNLPQHPQAS*QLLYRGLLLGA
Trigger: TGCCCCCAGGAGCAGACCCCGATAAAGAAGCTGCCATGATGCCTGCGGGTGTTGAGGAAGGTTCATCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TTCACTTGCTTGGTGTGCAGGCTTGTCCCTGTCCTCTaGGGCAAGGCCCTCTGGTGCATCTGCCTTATAGGC +
Preference number: 6 (lower is better)
Translates to: FTCLVCRLVPVL*GKALWCICLIG
Trigger: GCCTATAAGGCAGATGCACCAGAGGGCCTTGCCCCAGAGGACAGGGACAAGCCTGCACACCAAGCAAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp ATCAGAGGCCTTTGTGTCTGGGGGAAGAGCTGGAGATaGAGTAGACTGAGCCCGTGGCTCCTCCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: IRGLCVWGKSWR*SRLSPWLLLPC
Trigger: ACAAGGCAGGAGGAGCCACGGGCTCAGTCTACTCCATCTCCAGCTCTTCCCCCAGACACAAAGGCCTCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TATATGTCTGGGCGGTCAGTACCAACGTGGAATGGGTaGCCACGTTCGCATAGCCTGCAGGAGCTTGAGGGC +
Preference number: 6 (lower is better)
Translates to: YMSGRSVPTWNG*PRSHSLQELEG
Trigger: GCCCTCAAGCTCCTGCAGGCTATGCGAACGTGGCCACCCATTCCACGTTGGTACTGACCGCCCAGACATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CTTTGCAGCTGCCAAATGGGAGACAGTTCGATCTGCTaGGATGCTGGGCCCCGAGGGGACATGGTTGACTTC +
Preference number: 6 (lower is better)
Translates to: LCSCQMGDSSIC*DAGPRGDMVDF
Trigger: GAAGTCAACCATGTCCCCTCGGGGCCCAGCATCCCAGCAGATCGAACTGTCTCCCATTTGGCAGCTGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GAAAGTGGCTGGGTACTGTCAGGCTCTGGATCTACGTaGCTCTCTGCCTGGGAAAACGAGGCCCCGGGAGTT +
Preference number: 6 (lower is better)
Translates to: ESGWVLSGSGST*LSAWENEAPGV
Trigger: AACTCCCGGGGCCTCGTTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAGTACCCAGCCACTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GTCACTTTCAATGATGGAATGCACCCTGAACCTGGCTaGAGGCTCCTCATCCACCGGTGCTGGCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: VTFNDGMHPEPG*RLLIHRCWLGR
Trigger: CCTCCCCAGCCAGCACCGGTGGATGAGGAGCCTCAAGCCAGGTTCAGGGTGCATTCCATCATTGAAAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGCTTGCCCTTGGGAATGAGGATGGCCCGGGTCCACTaGGTCGAGGAGAATGAGCATCTAGCTTTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GLPLGMRMARVH*VEENEHLALQL
Trigger: CAGCTGCAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCGGGCCATCCTCATTCCCAAGGGCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TTTCTGTCACGTTTCTGTTCACTCCCTGCCTCCTCCTCAGCAGCCTaGGGTTCCATGGAGCTCTCTTTCACGCCTATTTGGGGGCCCACC +
Preference number: 6 (lower is better)
Translates to: FLSRFCSLPASSSAA*GSMELSFTPIWGPT
Trigger: GGTGGGCCCCCAAATAGGCGTGAAAGAGAGCTCCATGGAACCCAAGGCTGCTGAGGAGGAGGCAGGGAGTGAACAGAAACGTGACAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CTGGCTTCCTTGGTATCTGTTGGGCCGGCTGAGGGGTCAGGAGCATaGACTGGAGGCCTAGAAGATTCTGTAGCAGCCTCAGTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LASLVSVGPAEGSGA*TGGLEDSVAASVSR
Trigger: CCTGGAAACTGAGGCTGCTACAGAATCTTCTAGGCCTCCAGTCAATGCTCCTGACCCCTCAGCCGGCCCAACAGATACCAAGGAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CTCTCTGTTTGCACTTTGTTGACGGCGCAATCACTGCCCCTGCCATaGTCACCGTGCCTGTTGTGGCCGTTACACCACCAGATGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LSVCTLLTAQSLPLP*SPCLLWPLHHQMQQ
Trigger: CTGCTGCATCTGGTGGTGTAACGGCCACAACAGGCACGGTGACAATGGCAGGGGCAGTGATTGCGCCGTCAACAAAGTGCAAACAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp AGGATGGCCCGGGTCCACTTGGTCGAGGAGAATGAGCATCTAGCTTaGCAGCTGCCAAATGGGAGACAGTTCGATCTGCTGGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: RMARVHLVEENEHLA*QLPNGRQFDLLGCW
Trigger: CCAGCATCCCAGCAGATCGAACTGTCTCCCATTTGGCAGCTGCAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCGGGCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TTGTTGCCAGAGACGAAGTGGAGCTGCACAGCAGCTGTGTCATTCTaGAGGGCCAGCAGGCCCTGCCACACGATGGGGTACTTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: LLPETKWSCTAAVSF*RASRPCHTMGYFFR
Trigger: TCTGAAGAAGTACCCCATCGTGTGGCAGGGCCTGCTGGCCCTCAAGAATGACACAGCTGCTGTGCAGCTCCACTTCGTCTCTGGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GTGGGGGACCATAAGCAGGCCCTCCACCACCTCCTCTaGACCCAGAAACCTCTCTACTACGAGATGCTATGG +
Preference number: 6 (lower is better)
Translates to: VGDHKQALHHLL*TQKPLYYEMLW
Trigger: CCATAGCATCTCGTAGTAGAGAGGTTTCTGGGTTCAGAGGAGGTGGTGGAGGGCCTGCTTATGGTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS TCA 72 bp TTTGTGTCTGGGGGAAGAGCTGGAGATGGAGTAGACTaGGCCCGTGGCTCCTCCTGCCTTGTGATCCACTCT +
Preference number: 6 (lower is better)
Translates to: FVSGGRAGDGVD*ARGSSCLVIHS
Trigger: AGAGTGGATCACAAGGCAGGAGGAGCCACGGGCTCAGTCTACTCCATCTCCAGCTCTTCCCCCAGACACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GAGGAGAGTGAAGCGCTTCTGGCCGGATGCTGTAGGTaGTACTGGGCAGCGTGGGAGTGTTCATTCTCACCT +
Preference number: 6 (lower is better)
Translates to: EESEALLAGCCR*YWAAWECSFSP
Trigger: AGGTGAGAATGAACACTCCCACGCTGCCCAGTATCACCTACAGCATCCGGCCAGAAGCGCTTCACTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GCACAGTATAGGGGTGCAGTCGGTACTCAGACTGCATaGCTAGTACCTCTGACTGCACAGGGGCTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: AQYRGAVGTQTA*LVPLTAQGLWL
Trigger: GAGCCACAGCCCCTGTGCAGTCAGAGGTACTAGTCATGCAGTCTGAGTACCGACTGCACCCCTATACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CCTCTCTGCCTGAGAGGGAGACGCTCCAGGACTCTGTaGACGTCGCAAGTGAACAGGACTTTGACTTCGTTC +
Preference number: 6 (lower is better)
Translates to: PLCLRGRRSRTL*TSQVNRTLTSF
Trigger: GAACGAAGTCAAAGTCCTGTTCACTTGCGACGTCCACAGAGTCCTGGAGCGTCTCCCTCTCAGGCAGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 72 bp CTGAGCTGGGCCTTGAGCCAGACCCAACAGAAATACTaGCAAGCTCCTGACAGTCTTTGGGGCTGGCAACAG +
Preference number: 6 (lower is better)
Translates to: LSWALSQTQQKY*QAPDSLWGWQQ
Trigger: CTGTTGCCAGCCCCAAAGACTGTCAGGAGCTTGCCAGTATTTCTGTTGGGTCTGGCTCAAGGCCCAGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GCCGGACGATCGTCGATCACAGGCATGGACCCTGGGTaGAACCGACTGTTTTCATTAGCACTCGCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: AGRSSITGMDPG*NRLFSLALALC
Trigger: ACAGAGAGCGAGTGCTAATGAAAACAGTCGGTTCCACCCAGGGTCCATGCCTGTGATCGACGATCGTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTCTGCCGGACGATCGTCGATCACAGGCATGGACCCTaGGTGGAACCGACTGTTTTCATTAGCACTCGCTCT +
Preference number: 6 (lower is better)
Translates to: VCRTIVDHRHGP*VEPTVFISTRS
Trigger: AGAGCGAGTGCTAATGAAAACAGTCGGTTCCACCCAGGGTCCATGCCTGTGATCGACGATCGTCCGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GAGAGGCATTATATGTCTGGGCGGTCAGTACCAACGTaGAATGGGTGGCCACGTTCGCATAGCCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: ERHYMSGRSVPT*NGWPRSHSLQE
Trigger: CTCCTGCAGGCTATGCGAACGTGGCCACCCATTCCACGTTGGTACTGACCGCCCAGACATATAATGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CACCGAGAGGTGAATGGGCTCGGGCTTCTCCAAGGATaGCCTATCGGCCTTCACAGACGAAATCACAGGAGA +
Preference number: 6 (lower is better)
Translates to: HREVNGLGLLQG*PIGLHRRNHRR
Trigger: TCTCCTGTGATTTCGTCTGTGAAGGCCGATAGGCCATCCTTGGAGAAGCCCGAGCCCATTCACCTCTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GGGGCCAGAGGTTGTTGGGACAAACAACGGCTGTTTTaGGGCAGTCTGAGTGGGAAGAGAGACTGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: GARGCWDKQRLF*GSLSGKRDWKV
Trigger: GACCTTCCAGTCTCTCTTCCCACTCAGACTGCCCCAAAACAGCCGTTGTTTGTCCCAACAACCTCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTCAGGTGTGGAGAGGAATCTTGTTTGGGGGCTGGCTaGAATTCAGTGTGTGGCAGAACCAGTCCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: VRCGEESCLGAG*NSVCGRTSPGG
Trigger: CCCACCAGGACTGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TCGATGATCTTCTCTTCCCGCACGTTCTCGGGTAAGTaGCCCACCCAGAGATGCCTGGTTTCCCGGACCATG +
Preference number: 6 (lower is better)
Translates to: SMIFSSRTFSGK*PTQRCLVSRTM
Trigger: CATGGTCCGGGAAACCAGGCATCTCTGGGTGGGCAACTTACCCGAGAACGTGCGGGAAGAGAAGATCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TCCACAGCACTTACCCCATCTGCAGGCTGCTCAGGCTaGAGGTGCTTCCTGGCTTTAAGCCTGCCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: STALTPSAGCSG*RCFLALSLPSF
Trigger: GAAGGAAGGCAGGCTTAAAGCCAGGAAGCACCTCAAGCCTGAGCAGCCTGCAGATGGGGTAAGTGCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CGGAAGGATCTCTTGACGTCAGGACTTCCAAAACAGTaGGGCAACACAGCAAGACCCCGTTCCCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RKDLLTSGLPKQ*GNTARPRSQAG
Trigger: CCCAGCCTGGGAACGGGGTCTTGCTGTGTTGCCCAACTGTTTTGGAAGTCCTGACGTCAAGAGATCCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673875.1
CDS CAA 90 bp TTCTCCAGATCCACAGCACTTACCCCATCTGCAGGCTGCTCAGGCTaGAGGTGCTTCCTGGCTTTAAGCCTGCCTTCCTTCTCCACCACT +
Preference number: 6 (lower is better)
Translates to: FSRSTALTPSAGCSG*RCFLALSLPSFSTT
Trigger: AGTGGTGGAGAAGGAAGGCAGGCTTAAAGCCAGGAAGCACCTCAAGCCTGAGCAGCCTGCAGATGGGGTAAGTGCTGTGGATCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp GGGGTGCTGTACTGTTGTCCCCTCATTTGCAGCAGGACTCTCACCTaGAGCTTGGTTGGATTCAGGGACATGGCTCTCTACAGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: GVLYCCPLICSRTLT*SLVGFRDMALYRSH
Trigger: GTGGCTCCTGTAGAGAGCCATGTCCCTGAATCCAACCAAGCTCAAGGTGAGAGTCCTGCTGCAAATGAGGGGACAACAGTACAGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp ATTTCCTCTGGCTTCCTTGGTATCTGTTGGGCCGGCTaGGGGGTCAGGAGCATTGACTGGAGGCCTAGAAGA +
Preference number: 6 (lower is better)
Translates to: ISSGFLGICWAG*GVRSIDWRPRR
Trigger: TCTTCTAGGCCTCCAGTCAATGCTCCTGACCCCTCAGCCGGCCCAACAGATACCAAGGAAGCCAGAGGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GCCAGCATCTTTTCTGTCACGTTTCTGTTCACTCCCTaGCTCCTCCTCAGCAGCCTTGGGTTCCATGGAGCT +
Preference number: 6 (lower is better)
Translates to: ASIFSVTFLFTP*LLLSSLGFHGA
Trigger: AGCTCCATGGAACCCAAGGCTGCTGAGGAGGAGGCAGGGAGTGAACAGAAACGTGACAGAAAAGATGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TGCAGGAGCTTGAGGGCCTTTGGATGGAGGCTGCGATaGTGTGACAGAATCAGGTTTGACCTGGGACTTGGA +
Preference number: 6 (lower is better)
Translates to: CRSLRAFGWRLR*CDRIRFDLGLG
Trigger: TCCAAGTCCCAGGTCAAACCTGATTCTGTCACAGCATCGCAGCCTCCATCCAAAGGCCCTCAAGCTCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CTGGTTTGCATCAGGCTCAGCATCTGCAGTGGCGTCTaGCTTTTCGGCCTTTGGCTCATTGGCTTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: LVCIRLSICSGV*LFGLWLIGFLR
Trigger: TCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTTCGCATAGCCTGCAGGAGCTTGAGGGCCTTTGGATaGAGGCTGCGATGCTGTGACAGAATCAGGTTTGAC +
Preference number: 6 (lower is better)
Translates to: VRIACRSLRAFG*RLRCCDRIRFD
Trigger: GTCAAACCTGATTCTGTCACAGCATCGCAGCCTCCATCCAAAGGCCCTCAAGCTCCTGCAGGCTATGCGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GGGGTCAGCAAGCTTCTTGTTTGTGGTGACAATGCTTaGGGTGAGGACCAGCTGGTTGTGAACCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: GVSKLLVCGDNA*GEDQLVVNQHR
Trigger: CCTGTGCTGGTTCACAACCAGCTGGTCCTCACCCCAAGCATTGTCACCACAAACAAGAAGCTTGCTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CGTCACATGTGGATGCACCATGATCCTCACATCCCGTaGCACAGTATAGGGGTGCAGTCGGTACTCAGACTG +
Preference number: 6 (lower is better)
Translates to: RHMWMHHDPHIP*HSIGVQSVLRL
Trigger: CAGTCTGAGTACCGACTGCACCCCTATACTGTGCCACGGGATGTGAGGATCATGGTGCATCCACATGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GGAAGTCAGGTGTGGAGAGGAATCTTGTTTGGGGGCTaGCTGGAATTCAGTGTGTGGCAGAACCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GSQVWRGILFGG*LEFSVWQNQSW
Trigger: CCAGGACTGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GCTCAGCATCTGCAGTGGCGTCTGGCTTTTCGGCCTTaGGCTCATTGGCTTCCTCAGACTTCTGAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: AQHLQWRLAFRP*AHWLPQTSELV
Trigger: AACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TTGGTATCTGTTGGGCCGGCTGAGGGGTCAGGAGCATaGACTGGAGGCCTAGAAGATTCTGTAGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: LVSVGPAEGSGA*TGGLEDSVAAS
Trigger: TGAGGCTGCTACAGAATCTTCTAGGCCTCCAGTCAATGCTCCTGACCCCTCAGCCGGCCCAACAGATACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GAGTGTGAGGTTTCACTGCTATTTCCTCTGGCTTCCTaGGTATCTGTTGGGCCGGCTGAGGGGTCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: ECEVSLLFPLAS*VSVGPAEGSGA
Trigger: TGCTCCTGACCCCTCAGCCGGCCCAACAGATACCAAGGAAGCCAGAGGAAATAGCAGTGAAACCTCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TGGGGCCAGAGGTTGTTGGGACAAACAACGGCTGTTTaGGGGCAGTCTGAGTGGGAAGAGAGACTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: WGQRLLGQTTAV*GQSEWEERLEG
Trigger: ACCTTCCAGTCTCTCTTCCCACTCAGACTGCCCCAAAACAGCCGTTGTTTGTCCCAACAACCTCTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGTCTCTGGGAAGTCAGGTGTGGAGAGGAATCTTGTTaGGGGGCTGGCTGGAATTCAGTGTGTGGCAGAACC +
Preference number: 6 (lower is better)
Translates to: GLWEVRCGEESC*GAGWNSVCGRT
Trigger: GGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp ATATCCACGGGTCTCTGGGAAGTCAGGTGTGGAGAGGAATCTTGTTaGGGGGCTGGCTGGAATTCAGTGTGTGGCAGAACCAGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: ISTGLWEVRCGEESC*GAGWNSVCGRTSPG
Trigger: ACCAGGACTGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGACCCGTGGATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp AACCATATCCACGGGTCTCTGGGAAGTCAGGTGTGGAGAGGAATCTaGTTTGGGGGCTGGCTGGAATTCAGTGTGTGGCAGAACCAGTCC +
Preference number: 6 (lower is better)
Translates to: NHIHGSLGSQVWRGI*FGGWLEFSVWQNQS
Trigger: GGACTGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGACCCGTGGATATGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GGCAGGAGCAGGTTCAGATGCAGGCTTTGCTTCTTCTaGGACGGTAGCTGGCTCCACAGTCTTCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: GRSRFRCRLCFF*DGSWLHSLLFC
Trigger: ACAGAAGAGAAGACTGTGGAGCCAGCTACCGTCTCAGAAGAAGCAAAGCCTGCATCTGAACCTGCTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GTGACGGGCTTCTCCACGATACTCACTGCAGCTGCCTaGACAGGGGTCTTTGAACGCTTGCTTTTGTTTGGC +
Preference number: 6 (lower is better)
Translates to: VTGFSTILTAAA*TGVFERLLLFG
Trigger: GCCAAACAAAAGCAAGCGTTCAAAGACCCCTGTTCAGGCAGCTGCAGTGAGTATCGTGGAGAAGCCCGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp CATAGACGCTCCTTACATTCCGGCGCCTTGTTCGGCTaGGAGGCAAACTTGGTTCGGGATGTTCAAGGTCTG +
Preference number: 6 (lower is better)
Translates to: HRRSLHSGALFG*EANLVRDVQGL
Trigger: CAGACCTTGAACATCCCGAACCAAGTTTGCCTCTCAGCCGAACAAGGCGCCGGAATGTAAGGAGCGTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AATGAGGATGGCCCGGGTCCACTTGGTCGAGGAGAATaGGCATCTAGCTTTGCAGCTGCCAAATGGGAGACA +
Preference number: 6 (lower is better)
Translates to: NEDGPGPLGRGE*ASSFAAAKWET
Trigger: TGTCTCCCATTTGGCAGCTGCAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCGGGCCATCCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp CTCAGCACTTTGGAAGGCCCTGGCGGAAGGATCTCTTaGCGTCAGGACTTCCAAAACAGTTGGGCAACACAG +
Preference number: 6 (lower is better)
Translates to: LSTLEGPGGRIS*RQDFQNSWATQ
Trigger: CTGTGTTGCCCAACTGTTTTGGAAGTCCTGACGTCAAGAGATCCTTCCGCCAGGGCCTTCCAAAGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673875.1
CDS GCA 72 bp AGCTTCGGCTTTCTGGTTTGCATCAGGCTCAGCATCTaGAGTGGCGTCTGGCTTTTCGGCCTTTGGCTCATT +
Preference number: 6 (lower is better)
Translates to: SFGFLVCIRLSI*SGVWLFGLWLI
Trigger: AATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAAACCAGAAAGCCGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp AGTAGCCTAGGGGAGCCTATGGGATCCTCATCTTCATaGAAGGAACCATGTCGGACACTGGGAGAACCACCA +
Preference number: 6 (lower is better)
Translates to: SSLGEPMGSSSS*KEPCRTLGEPP
Trigger: TGGTGGTTCTCCCAGTGTCCGACATGGTTCCTTCCATGAAGATGAGGATCCCATAGGCTCCCCTAGGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CTCAGCATCTGCAGTGGCGTCTGGCTTTTCGGCCTTTaGCTCATTGGCTTCCTCAGACTTCTGAGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: LSICSGVWLFGL*LIGFLRLLSWF
Trigger: AAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp AGGTGGGGGAAGGTCTGGGGGCACAGATGCTTTGGTTaGAGTCCTTTCCTCAACACTGATTTCTTGGGACGA +
Preference number: 6 (lower is better)
Translates to: RWGKVWGHRCFG*SPFLNTDFLGR
Trigger: TCGTCCCAAGAAATCAGTGTTGAGGAAAGGACTCCAACCAAAGCATCTGTGCCCCCAGACCTTCCCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GTCTCTGGGAAGTCAGGTGTGGAGAGGAATCTTGTTTaGGGGCTGGCTGGAATTCAGTGTGTGGCAGAACCA +
Preference number: 6 (lower is better)
Translates to: VSGKSGVERNLV*GLAGIQCVAEP
Trigger: TGGTTCTGCCACACACTGAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TGTCCCCTCATTTGCAGCAGGACTCTCACCTTGAGCTaGGTTGGATTCAGGGACATGGCTCTCTACAGGAGC +
Preference number: 6 (lower is better)
Translates to: CPLICSRTLTLS*VGFRDMALYRS
Trigger: GCTCCTGTAGAGAGCCATGTCCCTGAATCCAACCAAGCTCAAGGTGAGAGTCCTGCTGCAAATGAGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CGGGTCCACTTGGTCGAGGAGAATGAGCATCTAGCTTaGCAGCTGCCAAATGGGAGACAGTTCGATCTGCTG +
Preference number: 6 (lower is better)
Translates to: RVHLVEENEHLA*QLPNGRQFDLL
Trigger: CAGCAGATCGAACTGTCTCCCATTTGGCAGCTGCAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp AGCCTCCTGAAGCTCTCGCTCCAATCTCTTTCTGGTCACTCTTGGTaGCTCAACGGGCTCTTTGACAGGAGAGCGGTTTTCATGGTCACC +
Preference number: 6 (lower is better)
Translates to: SLLKLSLQSLSGHSW*LNGLFDRRAVFMVT
Trigger: GGTGACCATGAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGCGAGAGCTTCAGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TGGATTCAGGGACATGGCTCTCTACAGGAGCCACCACTTTCTTGTTaGTGTTTCGCTTGCGGCGTGATCGGGTTGTTTTCTGGCGCCCTT +
Preference number: 6 (lower is better)
Translates to: WIQGHGSLQEPPLSC*CFACGVIGLFSGAL
Trigger: AAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGAGAGCCATGTCCCTGAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TGGTTGGATTCAGGGACATGGCTCTCTACAGGAGCCACCACTTTCTaGTTTGTGTTTCGCTTGCGGCGTGATCGGGTTGTTTTCTGGCGC +
Preference number: 6 (lower is better)
Translates to: WLDSGTWLSTGATTF*FVFRLRRDRVVFWR
Trigger: GCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGAGAGCCATGTCCCTGAATCCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AACTGCTCGCGAGCCCTAGGTTCATATCGGGGGTCATaGGCATCAAAGCGATTTGGACTTCGACTCCGAGAA +
Preference number: 6 (lower is better)
Translates to: NCSRALGSYRGS*ASKRFGLRLRE
Trigger: TTCTCGGAGTCGAAGTCCAAATCGCTTTGATGCTCATGACCCCCGATATGAACCTAGGGCTCGCGAGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375759.8
ENST00000438066.1
ENST00000471538.1
ENST00000673875.1
CDS TCA 72 bp GCTTCTGTGCTTCTCCCCGAGGAGAATTGGACCGCTTaGGTTTTTCCCGGTCTATCCTCTCACTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: ASVLLPEENWTA*VFPGLSSHSSL
Trigger: CAAGGAAGAGTGAGAGGATAGACCGGGAAAAACTCAAGCGGTCCAATTCTCCTCGGGGAGAAGCACAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AGCCACCACTTTCTTGTTTGTGTTTCGCTTGCGGCGTaGTCGGGTTGTTTTCTGGCGCCCTTTGTCTTTCCG +
Preference number: 6 (lower is better)
Translates to: SHHFLVCVSLAA*SGCFLAPFVFP
Trigger: CGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AGGCCAGTGAGTGCGCTCACCAGACCAGTGAGGGTTTaGGGAGCTGGTTTTGCCAAGGTTATCTTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: RPVSALTRPVRV*GAGFAKVIFCE
Trigger: TTCACAGAAGATAACCTTGGCAAAACCAGCTCCTCAAACCCTCACTGGTCTGGTGAGCGCACTCACTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp CTGTATCATCCAATCCCCGAGCAGCACTCGGGATGGTaGCTGGTTCATTATAATCCGTGCGTAGGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: LYHPIPEQHSGW*LVHYNPCVGLC
Trigger: ACAGAGACCTACGCACGGATTATAATGAACCAGGCACCATCCCGAGTGCTGCTCGGGGATTGGATGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS GCA 72 bp TTTGACAGGAGAGCGGTTTTCATGGTCACCCATGGTTaGATAGACGCTCCTTACATTCCGGCGCCTTGTTCG +
Preference number: 6 (lower is better)
Translates to: FDRRAVFMVTHG*IDAPYIPAPCS
Trigger: CGAACAAGGCGCCGGAATGTAAGGAGCGTCTATGCAACCATGGGTGACCATGAAAACCGCTCTCCTGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp CTACAGGAGCCACCACTTTCTTGTTTGTGTTTCGCTTaGGGCGTGATCGGGTTGTTTTCTGGCGCCCTTTGT +
Preference number: 6 (lower is better)
Translates to: LQEPPLSCLCFA*GVIGLFSGALC
Trigger: ACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CTGCAGTGGCGTCTGGCTTTTCGGCCTTTGGCTCATTaGCTTCCTCAGACTTCTGAGCTGGTTTTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: LQWRLAFRPLAH*LPQTSELVLKV
Trigger: CACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CTGAAGCTCTCGCTCCAATCTCTTTCTGGTCACTCTTaGTTGCTCAACGGGCTCTTTGACAGGAGAGCGGTT +
Preference number: 6 (lower is better)
Translates to: LKLSLQSLSGHS*LLNGLFDRRAV
Trigger: AACCGCTCTCCTGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGCGAGAGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GGGTTGCAGATCTGTCTGGGATTCTCCAGGATAAGGTaGAGGTGCTGGGAAGTTTTCTGGCTCCCCAGAAAT +
Preference number: 6 (lower is better)
Translates to: GLQICLGFSRIR*RCWEVFWLPRN
Trigger: ATTTCTGGGGAGCCAGAAAACTTCCCAGCACCTCCACCTTATCCTGGAGAATCCCAGACAGATCTGCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TTCACAGACGAAATCACAGGAGAGGCATTATATGTCTaGGCGGTCAGTACCAACGTGGAATGGGTGGCCACG +
Preference number: 6 (lower is better)
Translates to: FTDEITGEALYV*AVSTNVEWVAT
Trigger: CGTGGCCACCCATTCCACGTTGGTACTGACCGCCCAGACATATAATGCCTCTCCTGTGATTTCGTCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TTGAACCATATCCACGGGTCTCTGGGAAGTCAGGTGTaGAGAGGAATCTTGTTTGGGGGCTGGCTGGAATTC +
Preference number: 6 (lower is better)
Translates to: LNHIHGSLGSQV*RGILFGGWLEF
Trigger: GAATTCCAGCCAGCCCCCAAACAAGATTCCTCTCCACACCTGACTTCCCAGAGACCCGTGGATATGGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TCCAGGACTCTGTGGACGTCGCAAGTGAACAGGACTTaGACTTCGTTCAATCGGCCTCCTCTCATGGTCTCT +
Preference number: 6 (lower is better)
Translates to: SRTLWTSQVNRT*TSFNRPPLMVS
Trigger: AGAGACCATGAGAGGAGGCCGATTGAACGAAGTCAAAGTCCTGTTCACTTGCGACGTCCACAGAGTCCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CAA 72 bp AGCGCTCCAAACGAGACTTGTCCAGTTTCTCATATCTaGGAGGGGAGAGTGAGCTACAGCTTCCACTCCGGT +
Preference number: 6 (lower is better)
Translates to: SAPNETCPVSHI*EGRVSYSFHSG
Trigger: ACCGGAGTGGAAGCTGTAGCTCACTCTCCCCTCCAAGATATGAGAAACTGGACAAGTCTCGTTTGGAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GATTTTCCACAGATTCACCTGCTAGTTCTCCCAGTCTaGCTTGTAGGTCTGAGCTGGGCCTTGAGCCAGACC +
Preference number: 6 (lower is better)
Translates to: DFPQIHLLVLPV*LVGLSWALSQT
Trigger: GGTCTGGCTCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAGCAGGTGAATCTGTGGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TCTACAGGAGCCACCACTTTCTTGTTTGTGTTTCGCTaGCGGCGTGATCGGGTTGTTTTCTGGCGCCCTTTG +
Preference number: 6 (lower is better)
Translates to: STGATTFLFVFR*RRDRVVFWRPL
Trigger: CAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TCAGGGACATGGCTCTCTACAGGAGCCACCACTTTCTaGTTTGTGTTTCGCTTGCGGCGTGATCGGGTTGTT +
Preference number: 6 (lower is better)
Translates to: SGTWLSTGATTF*FVFRLRRDRVV
Trigger: AACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGAGAGCCATGTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp TCTCAGCACTTTGGAAGGCCCTGGCGGAAGGATCTCTaGACGTCAGGACTTCCAAAACAGTTGGGCAACACA +
Preference number: 6 (lower is better)
Translates to: SQHFGRPWRKDL*TSGLPKQLGNT
Trigger: TGTGTTGCCCAACTGTTTTGGAAGTCCTGACGTCAAGAGATCCTTCCGCCAGGGCCTTCCAAAGTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673875.1
CDS CAA 90 bp TTGCATCAGGCTCAGCATCTGCAGTGGCGTCTGGCTTTTCGGCCTTaGGCTCATTGGCTTCCTCAGACTTCTGAGCTGGTTTTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: LHQAQHLQWRLAFRP*AHWLPQTSELVLKV
Trigger: CACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAAGCCAGACGCCACTGCAGATGCTGAGCCTGATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp ACATGGCTCTCTACAGGAGCCACCACTTTCTTGTTTGTGTTTCGCTaGCGGCGTGATCGGGTTGTTTTCTGGCGCCCTTTGTCTTTCCGA +
Preference number: 6 (lower is better)
Translates to: TWLSTGATTFLFVFR*RRDRVVFWRPLSFR
Trigger: TCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGAGAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CTGTACTGTTGTCCCCTCATTTGCAGCAGGACTCTCACCTTGAGCTaGGTTGGATTCAGGGACATGGCTCTCTACAGGAGCCACCACTTT +
Preference number: 6 (lower is better)
Translates to: LYCCPLICSRTLTLS*VGFRDMALYRSHHF
Trigger: AAAGTGGTGGCTCCTGTAGAGAGCCATGTCCCTGAATCCAACCAAGCTCAAGGTGAGAGTCCTGCTGCAAATGAGGGGACAACAGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp GGCTCCACAGTCTTCTCTTCTGTTACCAAAGGCGCCTCTACCGTTTaGTCACCAGTGGTCTTCTCTAGTGCTGATGGGGCTGATTCTAGA +
Preference number: 6 (lower is better)
Translates to: GSTVFSSVTKGASTV*SPVVFSSADGADSR
Trigger: TCTAGAATCAGCCCCATCAGCACTAGAGAAGACCACTGGTGACAAAACGGTAGAGGCGCCTTTGGTAACAGAAGAGAAGACTGTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TTTCGGCCTTTGGCTCATTGGCTTCCTCAGACTTCTGAGCTGGTTTaGAAAGTGGCTGGGTACTGTCAGGCTCTGGATCTACGTTGCTCT +
Preference number: 6 (lower is better)
Translates to: FRPLAHWLPQTSELV*KVAGYCQALDLRCS
Trigger: AGAGCAACGTAGATCCAGAGCCTGACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp CTAGTGCTGATGGGGCTGATTCTAGAGTTACGACTGTaGCACTTGGAGGCCCAACGGAAGGTGGAGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LVLMGLILELRL*HLEAQRKVEFS
Trigger: TGAAAACTCCACCTTCCGTTGGGCCTCCAAGTGTCACAGTCGTAACTCTAGAATCAGCCCCATCAGCACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp TGGCTCATTGGCTTCCTCAGACTTCTGAGCTGGTTTTaGAAGTGGCTGGGTACTGTCAGGCTCTGGATCTAC +
Preference number: 6 (lower is better)
Translates to: WLIGFLRLLSWF*KWLGTVRLWIY
Trigger: GTAGATCCAGAGCCTGACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp TTTTCGGCCTTTGGCTCATTGGCTTCCTCAGACTTCTaGGCTGGTTTTGAAAGTGGCTGGGTACTGTCAGGC +
Preference number: 6 (lower is better)
Translates to: FSAFGSLASSDF*AGFESGWVLSG
Trigger: GCCTGACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAAAGGCCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp TCTTTCTGGTCACTCTTGGTTGCTCAACGGGCTCTTTaGCAGGAGAGCGGTTTTCATGGTCACCCATGGTTG +
Preference number: 6 (lower is better)
Translates to: SFWSLLVAQRAL*QESGFHGHPWL
Trigger: CAACCATGGGTGACCATGAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GTTTTCATTAGCACTCGCTCTCTGTTTGCACTTTGTTaGCGGCGCAATCACTGCCCCTGCCATTGTCACCGT +
Preference number: 6 (lower is better)
Translates to: VFISTRSLFALC*RRNHCPCHCHR
Trigger: ACGGTGACAATGGCAGGGGCAGTGATTGCGCCGTCAACAAAGTGCAAACAGAGAGCGAGTGCTAATGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp CCTTTGTTTTTACTGCAGAGCCCTGGGAAGATTCACTaGGGTGATAACCACTCAGTGGCTCACACGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PLFLLQSPGKIH*GDNHSVAHTEA
Trigger: TGCCTCCGTGTGAGCCACTGAGTGGTTATCACCTCAGTGAATCTTCCCAGGGCTCTGCAGTAAAAACAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000487496.1
CDS GCA 72 bp AGCTCTCGCTCCAATCTCTTTCTGGTCACTCTTGGTTaGTCAACGGGCTCTTTGACAGGAGAGCGGTTTTCA +
Preference number: 6 (lower is better)
Translates to: SSRSNLFLVTLG*STGSLTGERFS
Trigger: TGAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGCGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp AAACTGTATCATCCAATCCCCGAGCAGCACTCGGGATaGTGCCTGGTTCATTATAATCCGTGCGTAGGTCTC +
Preference number: 6 (lower is better)
Translates to: KLYHPIPEQHSG*CLVHYNPCVGL
Trigger: GAGACCTACGCACGGATTATAATGAACCAGGCACCATCCCGAGTGCTGCTCGGGGATTGGATGATACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 72 bp CTGTTACCAAAGGCGCCTCTACCGTTTTGTCACCAGTaGTCTTCTCTAGTGCTGATGGGGCTGATTCTAGAG +
Preference number: 6 (lower is better)
Translates to: LLPKAPLPFCHQ*SSLVLMGLILE
Trigger: CTCTAGAATCAGCCCCATCAGCACTAGAGAAGACCACTGGTGACAAAACGGTAGAGGCGCCTTTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TACATTCCGGCGCCTTGTTCGGCTGAGAGGCAAACTTaGTTCGGGATGTTCAAGGTCTGCAGCAGAGTTTTT +
Preference number: 6 (lower is better)
Translates to: YIPAPCSAERQT*FGMFKVCSRVF
Trigger: AAAAACTCTGCTGCAGACCTTGAACATCCCGAACCAAGTTTGCCTCTCAGCCGAACAAGGCGCCGGAATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp TTTGTGTTTCGCTTGCGGCGTGATCGGGTTGTTTTCTaGCGCCCTTTGTCTTTCCGAACAAGAGTGACTTCC +
Preference number: 6 (lower is better)
Translates to: FVFRLRRDRVVF*RPLSFRTRVTS
Trigger: GGAAGTCACTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GTCTTCTCTTCTGTTACCAAAGGCGCCTCTACCGTTTaGTCACCAGTGGTCTTCTCTAGTGCTGATGGGGCT +
Preference number: 6 (lower is better)
Translates to: VFSSVTKGASTV*SPVVFSSADGA
Trigger: AGCCCCATCAGCACTAGAGAAGACCACTGGTGACAAAACGGTAGAGGCGCCTTTGGTAACAGAAGAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp AAGCTCTCGCTCCAATCTCTTTCTGGTCACTCTTGGTaGCTCAACGGGCTCTTTGACAGGAGAGCGGTTTTC +
Preference number: 6 (lower is better)
Translates to: KLSLQSLSGHSW*LNGLFDRRAVF
Trigger: GAAAACCGCTCTCCTGTCAAAGAGCCCGTTGAGCAACCAAGAGTGACCAGAAAGAGATTGGAGCGAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CGCTTGCGGCGTGATCGGGTTGTTTTCTGGCGCCCTTaGTCTTTCCGAACAAGAGTGACTTCCACTTCTTTA +
Preference number: 6 (lower is better)
Translates to: RLRRDRVVFWRP*SFRTRVTSTSL
Trigger: TAAAGAAGTGGAAGTCACTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GGACATGGCTCTCTACAGGAGCCACCACTTTCTTGTTaGTGTTTCGCTTGCGGCGTGATCGGGTTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: GHGSLQEPPLSC*CFACGVIGLFS
Trigger: AGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAGTGGTGGCTCCTGTAGAGAGCCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CTTTTCCTTGTCAGCAGCTACCAGCACCTCCGAGGCTaGTATCTCAGAGTTGTTTGTCACTGGAGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LFLVSSYQHLRG*YLRVVCHWRCC
Trigger: ACAGCACCTCCAGTGACAAACAACTCTGAGATACAAGCCTCGGAGGTGCTGGTAGCTGCTGACAAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp AAGTCCGCTCTCGAGGATCTCTATAGTAATCCTGATCGTAATGTCTaGTCCGATCAAATCCTCCCGTCCCCCGTTCATGGTGTCCATAGG +
Preference number: 6 (lower is better)
Translates to: KSALEDLYSNPDRNV*SDQILPSPVHGVHR
Trigger: CCTATGGACACCATGAACGGGGGACGGGAGGATTTGATCGGACAAGACATTACGATCAGGATTACTATAGAGATCCTCGAGAGCGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375759.8
ENST00000438066.1
ENST00000471538.1
ENST00000673875.1
CDS CAA 90 bp GGACTTCTTGATTTTCCACAGATTCACCTGCTAGTTCTCCCAGTCTaGCTTGTAGGTCTGAGCTGGGCCTTGAGCCAGACCCAACAGAAA +
Preference number: 6 (lower is better)
Translates to: GLLDFPQIHLLVLPV*LVGLSWALSQTQQK
Trigger: TTTCTGTTGGGTCTGGCTCAAGGCCCAGCTCAGACCTACAAGCAAGACTGGGAGAACTAGCAGGTGAATCTGTGGAAAATCAAGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TCTGGGGACGGCCCAGAGGCAGACACGTCTTCTTTCTCTGGTTCCTaGTCTGGATCAACTGGATCACTTTTCAACTGGGATGATAAACCA +
Preference number: 6 (lower is better)
Translates to: SGDGPEADTSSFSGS*SGSTGSLFNWDDKP
Trigger: TGGTTTATCATCCCAGTTGAAAAGTGATCCAGTTGATCCAGACAAGGAACCAGAGAAAGAAGACGTGTCTGCCTCTGGGCCGTCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp TGTGACAGAATCAGGTTTGACCTGGGACTTGGACACTaGCTGCTGAAATTCAATGTCCATTGCACTGGCCGG +
Preference number: 6 (lower is better)
Translates to: CDRIRFDLGLGH*LLKFNVHCTGR
Trigger: CCGGCCAGTGCAATGGACATTGAATTTCAGCAGTCAGTGTCCAAGTCCCAGGTCAAACCTGATTCTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp ACCTCCTCTGAACCCAGAAACCTCTCTACTACGAGATaGTATGGAAACTGTATCATCCAATCCCCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: TSSEPRNLSTTR*YGNCIIQSPSS
Trigger: GCTGCTCGGGGATTGGATGATACAGTTTCCATAGCATCTCGTAGTAGAGAGGTTTCTGGGTTCAGAGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 72 bp AGGTTCATATCGGGGGTCATGAGCATCAAAGCGATTTaGACTTCGACTCCGAGAAGCGTAATAGAGCCCATG +
Preference number: 6 (lower is better)
Translates to: RFISGVMSIKAI*TSTPRSVIEPM
Trigger: CATGGGCTCTATTACGCTTCTCGGAGTCGAAGTCCAAATCGCTTTGATGCTCATGACCCCCGATATGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375759.8
ENST00000438066.1
ENST00000471538.1
ENST00000673875.1
CDS CAA 72 bp TTGGCTCATTGGCTTCCTCAGACTTCTGAGCTGGTTTaGAAAGTGGCTGGGTACTGTCAGGCTCTGGATCTA +
Preference number: 6 (lower is better)
Translates to: LAHWLPQTSELV*KVAGYCQALDL
Trigger: TAGATCCAGAGCCTGACAGTACCCAGCCACTTTCAAAACCAGCTCAGAAGTCTGAGGAAGCCAATGAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CTTTCTTGTTTGTGTTTCGCTTGCGGCGTGATCGGGTaGTTTTCTGGCGCCCTTTGTCTTTCCGAACAAGAG +
Preference number: 6 (lower is better)
Translates to: LSCLCFACGVIG*FSGALCLSEQE
Trigger: CTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAACAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TTTTTGTATAGCGCTCCAAACGAGACTTGTCCAGTTTCTCATATCTaGGAGGGGAGAGTGAGCTACAGCTTCCACTCCGGTCTGAGGATC +
Preference number: 6 (lower is better)
Translates to: FLYSAPNETCPVSHI*EGRVSYSFHSGLRI
Trigger: GATCCTCAGACCGGAGTGGAAGCTGTAGCTCACTCTCCCCTCCAAGATATGAGAAACTGGACAAGTCTCGTTTGGAGCGCTATACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TTTGTGTTTCGCTTGCGGCGTGATCGGGTTGTTTTCTGGCGCCCTTaGTCTTTCCGAACAAGAGTGACTTCCACTTCTTTAGACCCTTTG +
Preference number: 6 (lower is better)
Translates to: FVFRLRRDRVVFWRP*SFRTRVTSTSLDPL
Trigger: CAAAGGGTCTAAAGAAGTGGAAGTCACTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACGCCGCAAGCGAAACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp ATAACAGAGGTAATTTTGGGAGCAATGACTGGAGCCACCTTTTCCTaGTCAGCAGCTACCAGCACCTCCGAGGCTTGTATCTCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: ITEVILGAMTGATFS*SAATSTSEACISEL
Trigger: CAACTCTGAGATACAAGCCTCGGAGGTGCTGGTAGCTGCTGACAAGGAAAAGGTGGCTCCAGTCATTGCTCCCAAAATTACCTCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp CACTGGGAGAACCACCAGTCCTTTCAGAATCTTCGCTaGTTTGGCGTGAACTTCTGTAATTCCGTTCTCGCT +
Preference number: 6 (lower is better)
Translates to: HWENHQSFQNLR*FGVNFCNSVLA
Trigger: AGCGAGAACGGAATTACAGAAGTTCACGCCAAATCAGCGAAGATTCTGAAAGGACTGGTGGTTCTCCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GAGCTGGATAGTCCCGCCTGGAATCCTCAGGATAAGTaGCTGGAGTTCGAACACTCTCATAATATGTACGAT +
Preference number: 6 (lower is better)
Translates to: ELDSPAWNPQDK*LEFEHSHNMYD
Trigger: ATCGTACATATTATGAGAGTGTTCGAACTCCAGGCACTTATCCTGAGGATTCCAGGCGGGACTATCCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS GCA 72 bp GAACTGATCGAGCTGGAGAATCATCACTTGAACTACTaGTGGAATCACTGTCACTGCTGGTACTACTGCTGC +
Preference number: 6 (lower is better)
Translates to: ELIELENHHLNY*WNHCHCWYYCC
Trigger: GCAGCAGTAGTACCAGCAGTGACAGTGATTCCAGCAGTAGTTCAAGTGATGATTCTCCAGCTCGATCAGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442985.1
CDS CAA 72 bp CTCGAGGATCTCTATAGTAATCCTGATCGTAATGTCTaGTCCGATCAAATCCTCCCGTCCCCCGTTCATGGT +
Preference number: 6 (lower is better)
Translates to: LEDLYSNPDRNV*SDQILPSPVHG
Trigger: ACCATGAACGGGGGACGGGAGGATTTGATCGGACAAGACATTACGATCAGGATTACTATAGAGATCCTCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375759.8
ENST00000438066.1
ENST00000471538.1
ENST00000673875.1
CDS CAA 90 bp ACCACGCAAGGCATGAGTTCCAGGCGGTTTTTCGCTATTCCCTCTTaGTCAGCTTTCTCTCTGCTCAGTTTATTACAACTCCTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TTQGMSSRRFFAIPS*SAFSLLSLLQLLGF
Trigger: AAAGCCCAGGAGTTGTAATAAACTGAGCAGAGAGAAAGCTGACAAAGAGGGAATAGCGAAAAACCGCCTGGAACTCATGCCTTGCGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CCCCTGGGACTGACAGCAGCATCCACATTTTTCAGACTTGCAGATTaGTCCACTGCTAACCTGGAGTTTCGAGATCTTCCTCTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: PLGLTAASTFFRLAD*STANLEFRDLPLFD
Trigger: ATCAAAGAGAGGAAGATCTCGAAACTCCAGGTTAGCAGTGGACAAATCTGCAAGTCTGAAAAATGTGGATGCTGCTGTCAGTCCCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp AATCGAGAACTTTCATATAATGCAGAGGCTCTGGGTGAGTGGGATTaGTGTTCACCATCTTCGTCAGAATCAGAAGGCACCTCACCAGGT +
Preference number: 6 (lower is better)
Translates to: NRELSYNAEALGEWD*CSPSSSESEGTSPG
Trigger: ACCTGGTGAGGTGCCTTCTGATTCTGACGAAGATGGTGAACACAAATCCCACTCACCCAGAGCCTCTGCATTATATGAAAGTTCTCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AGGGCTTTGCTCTCGCTCATTTTCTTGGTCCGTTTCTaGAGACTGAGAACTAGGGGAGTGAACCTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: RALLSLIFLVRF*RLRTRGVNLSF
Trigger: AAAGGAAAGGTTCACTCCCCTAGTTCTCAGTCTTCAGAAACGGACCAAGAAAATGAGCGAGAGCAAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp CTTTCTCTTTCACTCGAGTCAAAACCACGCAAGGCATaGGTTCCAGGCGGTTTTTCGCTATTCCCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: LSLSLESKPRKA*VPGGFSLFPLC
Trigger: ACAAAGAGGGAATAGCGAAAAACCGCCTGGAACTCATGCCTTGCGTGGTTTTGACTCGAGTGAAAGAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp ACCACCAGTCCTTTCAGAATCTTCGCTGATTTGGCGTaGACTTCTGTAATTCCGTTCTCGCTTGGTGCAGAT +
Preference number: 6 (lower is better)
Translates to: TTSPFRIFADLA*TSVIPFSLGAD
Trigger: ATCTGCACCAAGCGAGAACGGAATTACAGAAGTTCACGCCAAATCAGCGAAGATTCTGAAAGGACTGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GCACAGATGCTTTGGTTGGAGTCCTTTCCTCAACACTaGTTTCTTGGGACGAATTCTCTGTGGAGGGAATCT +
Preference number: 6 (lower is better)
Translates to: AQMLWLESFPQH*FLGTNSLWRES
Trigger: AGATTCCCTCCACAGAGAATTCGTCCCAAGAAATCAGTGTTGAGGAAAGGACTCCAACCAAAGCATCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp GCTTTGGTTGGAGTCCTTTCCTCAACACTGATTTCTTaGGACGAATTCTCTGTGGAGGGAATCTTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: ALVGVLSSTLIS*DEFSVEGILLR
Trigger: CCTAAGCAAGATTCCCTCCACAGAGAATTCGTCCCAAGAAATCAGTGTTGAGGAAAGGACTCCAACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CTTTCATATAATGCAGAGGCTCTGGGTGAGTGGGATTaGTGTTCACCATCTTCGTCAGAATCAGAAGGCACC +
Preference number: 6 (lower is better)
Translates to: LSYNAEALGEWD*CSPSSSESEGT
Trigger: GGTGCCTTCTGATTCTGACGAAGATGGTGAACACAAATCCCACTCACCCAGAGCCTCTGCATTATATGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp AGGATAAGTGCCTGGAGTTCGAACACTCTCATAATATGTACGATCTaGGTTATAGTCGTAGGATGCCCTTCGTTCCTCTCTTCTTTCGGC +
Preference number: 6 (lower is better)
Translates to: RISAWSSNTLIICTI*VIVVGCPSFLSSFG
Trigger: GCCGAAAGAAGAGAGGAACGAAGGGCATCCTACGACTATAACCAAGATCGTACATATTATGAGAGTGTTCGAACTCCAGGCACTTATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CAA 90 bp AGTTTCTGGTCCAGGGCAGAAGATTTGACAGTGTCATTATCAAGCTaGGCTTTCAACTTTTCCACAGGAGTGTGGTCAATGACCTTTCCC +
Preference number: 6 (lower is better)
Translates to: SFWSRAEDLTVSLSS*AFNFSTGVWSMTFP
Trigger: GGGAAAGGTCATTGACCACACTCCTGTGGAAAAGTTGAAAGCCAAGCTTGATAATGACACTGTCAAATCTTCTGCCCTGGACCAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp CCGTGTGAGCTCCATAAATCTGCTATGGAACAGAACTACTGGTTCTaGAATGGAATCAGTTGTGCTGTTTGCTCCCTCAGATGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: PCELHKSAMEQNYWF*NGISCAVCSLRCLL
Trigger: AAGCAGACATCTGAGGGAGCAAACAGCACAACTGATTCCATTCAAGAACCAGTAGTTCTGTTCCATAGCAGATTTATGGAGCTCACACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp ACAGGCCCATATCGGCAGAAATGTCGTGTTAAATACTaGTCTGACACATTCGAAGAAAGCCCATCTAGCCAC +
Preference number: 6 (lower is better)
Translates to: TGPYRQKCRVKY*SDTFEESPSSH
Trigger: GTGGCTAGATGGGCTTTCTTCGAATGTGTCAGATCAGTATTTAACACGACATTTCTGCCGATATGGGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375759.8
ENST00000442985.1
ENST00000673875.1
CDS GCA 72 bp CCTTTTGATGCAGTCAAGGCTTTTTCTTGGTCCTCTTaGTGCCGAAAGAATACCAGACCATACCTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PFDAVKAFSWSS*CRKNTRPYLSS
Trigger: AGAAGAGAGGTATGGTCTGGTATTCTTTCGGCAGCAAGAGGACCAAGAAAAAGCCTTGACTGCATCAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375759.8
ENST00000438066.1
ENST00000442985.1
ENST00000673875.1
CDS GCA 72 bp CTCAGTTTATTACAACTCCTGGGCTTTTCAGGGCTTTaGTCTCGCTCATTTTCTTGGTCCGTTTCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: LSLLQLLGFSGL*SRSFSWSVSED
Trigger: GTCTTCAGAAACGGACCAAGAAAATGAGCGAGAGCAAAGCCCTGAAAAGCCCAGGAGTTGTAATAAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GGTTTTTCGCTATTCCCTCTTTGTCAGCTTTCTCTCTaGTCAGTTTATTACAACTCCTGGGCTTTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: GFSLFPLCQLSL*SVYYNSWAFQG
Trigger: GCCCTGAAAAGCCCAGGAGTTGTAATAAACTGAGCAGAGAGAAAGCTGACAAAGAGGGAATAGCGAAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp GCCTGGAGTTCGAACACTCTCATAATATGTACGATCTaGGTTATAGTCGTAGGATGCCCTTCGTTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: AWSSNTLIICTI*VIVVGCPSFLS
Trigger: AGAGAGGAACGAAGGGCATCCTACGACTATAACCAAGATCGTACATATTATGAGAGTGTTCGAACTCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CAA 72 bp GGCATGAGTTCCAGGCGGTTTTTCGCTATTCCCTCTTaGTCAGCTTTCTCTCTGCTCAGTTTATTACAACTC +
Preference number: 6 (lower is better)
Translates to: GMSSRRFFAIPS*SAFSLLSLLQL
Trigger: GAGTTGTAATAAACTGAGCAGAGAGAAAGCTGACAAAGAGGGAATAGCGAAAAACCGCCTGGAACTCATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp GGCAGAAGAGGAAATATCCTCTACAATTCCAACGAATaGGGAAGGCACAGTTGCTCGCCAATAGTTCACTTT +
Preference number: 6 (lower is better)
Translates to: GRRGNILYNSNE*GRHSCSPIVHF
Trigger: AAAGTGAACTATTGGCGAGCAACTGTGCCTTCCTCATTCGTTGGAATTGTAGAGGATATTTCCTCTTCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438066.1
ENST00000471538.1
CDS GCA 72 bp TTTGATGCAGTCAAGGCTTTTTCTTGGTCCTCTTGCTaGCGAAAGAATACCAGACCATACCTCTCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: FDAVKAFSWSSC*RKNTRPYLSSE
Trigger: TTCAGAAGAGAGGTATGGTCTGGTATTCTTTCGGCAGCAAGAGGACCAAGAAAAAGCCTTGACTGCATCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375759.8
ENST00000438066.1
ENST00000442985.1
ENST00000673875.1
CDS GCA 72 bp GTGCATATTCAATTTCATTGTAGAGAACCAGGGCCATaGCTTTTAAGCGGTCAAACACCACCTTTACCACAG +
Preference number: 6 (lower is better)
Translates to: VHIQFHCREPGP*LLSGQTPPLPQ
Trigger: CTGTGGTAAAGGTGGTGTTTGACCGCTTAAAAGGCATGGCCCTGGTTCTCTACAATGAAATTGAATATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 72 bp CGAGAACTTTCATATAATGCAGAGGCTCTGGGTGAGTaGGATTTGTGTTCACCATCTTCGTCAGAATCAGAA +
Preference number: 6 (lower is better)
Translates to: RELSYNAEALGE*DLCSPSSSESE
Trigger: TTCTGATTCTGACGAAGATGGTGAACACAAATCCCACTCACCCAGAGCCTCTGCATTATATGAAAGTTCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp AAGACAATCGAGAACTTTCATATAATGCAGAGGCTCTaGGTGAGTGGGATTTGTGTTCACCATCTTCGTCAG +
Preference number: 6 (lower is better)
Translates to: KTIENFHIMQRL*VSGICVHHLRQ
Trigger: CTGACGAAGATGGTGAACACAAATCCCACTCACCCAGAGCCTCTGCATTATATGAAAGTTCTCGATTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp TGCTCGCCAATAGTTCACTTTTGTAGCCATCCAGCCCAGTCAATTTaGATTGCTGTATCCACAACTGATCATCACCATGTGTTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: CSPIVHFCSHPAQSI*IAVSTTDHHHVFKA
Trigger: AGCTTTGAACACATGGTGATGATCAGTTGTGGATACAGCAATCAAAATTGACTGGGCTGGATGGCTACAAAAGTGAACTATTGGCGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438066.1
ENST00000471538.1
CDS TCA 72 bp GTAATCCCTGTATTCCCGAGGATCATCGTAGTATCGTaGTTCATAGTAGTCTCCTTGGTAAGTTTCCCATTC +
Preference number: 6 (lower is better)
Translates to: VIPVFPRIIVVS*FIVVSLVSFPF
Trigger: GAATGGGAAACTTACCAAGGAGACTACTATGAATCACGATACTACGATGATCCTCGGGAATACAGGGATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS TCA 72 bp GAGAGACCTGAAGTTTCTGGTCCAGGGCAGAAGATTTaGCAGTGTCATTATCAAGCTTGGCTTTCAACTTTT +
Preference number: 6 (lower is better)
Translates to: ERPEVSGPGQKI*QCHYQAWLSTF
Trigger: AAAAGTTGAAAGCCAAGCTTGATAATGACACTGTCAAATCTTCTGCCCTGGACCAGAAACTTCAGGTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp TCTTTATTCTCAGGAGCAGATTCTGGGGTCTTGGGATaGTTCTCTGTATCTTCCTGTTTCTCAACCTCTTTG +
Preference number: 6 (lower is better)
Translates to: SLFSGADSGVLG*FSVSSCFSTSL
Trigger: CAAAGAGGTTGAGAAACAGGAAGATACAGAGAATCATCCCAAGACCCCAGAATCTGCTCCTGAGAATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp CCCACCGATTTTCCTCCCTTTGGTCTCTTTTACAGCTaGTTGTGCATATTCAATTTCATTGTAGAGAACCAG +
Preference number: 6 (lower is better)
Translates to: PTDFPPFGLFYS*LCIFNFIVENQ
Trigger: CTGGTTCTCTACAATGAAATTGAATATGCACAAGCAGCTGTAAAAGAGACCAAAGGGAGGAAAATCGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CAA 90 bp GGCTATTTCCATTTCCATCTGCTGTTTCCTACGACTCTGTTCCATTaGTTTTCGGTAACTCTGCGTGTGATCGATGTCAATGCCAATTTT +
Preference number: 6 (lower is better)
Translates to: GYFHFHLLFPTTLFH*FSVTLRVIDVNANF
Trigger: AAAATTGGCATTGACATCGATCACACGCAGAGTTACCGAAAACAAATGGAACAGAGTCGTAGGAAACAGCAGATGGAAATGGAAATAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp GATTTTCCTCCCTTTGGTCTCTTTTACAGCTGCTTGTaGATATTCAATTTCATTGTAGAGAACCAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: DFPPFGLFYSCL*IFNFIVENQGH
Trigger: ATGGCCCTGGTTCTCTACAATGAAATTGAATATGCACAAGCAGCTGTAAAAGAGACCAAAGGGAGGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS GCA 72 bp TTTGGCGTGAACTTCTGTAATTCCGTTCTCGCTTGGTaGAGATATCAAAATCGACATGATCCATCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: FGVNFCNSVLAW*RYQNRHDPSFS
Trigger: AGAAAAGGATGGATCATGTCGATTTTGATATCTGCACCAAGCGAGAACGGAATTACAGAAGTTCACGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp AGCAGAGTTTTTAGAAGCAGTCCTTGTAATCTTCTCTaGCTCCATCTTCAATTCCAAAAGCTTCTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SRVFRSSPCNLL*LHLQFQKLLCF
Trigger: GAAGCACAGAAGCTTTTGGAATTGAAGATGGAGGCAGAGAAGATTACAAGGACTGCTTCTAAAAACTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CCA 72 bp CATTTTTCAGACTTGCAGATTTGTCCACTGCTAACCTaGAGTTTCGAGATCTTCCTCTCTTTGATTTGGAGT +
Preference number: 6 (lower is better)
Translates to: HFSDLQICPLLT*SFEIFLSLIWS
Trigger: ACTCCAAATCAAAGAGAGGAAGATCTCGAAACTCCAGGTTAGCAGTGGACAAATCTGCAAGTCTGAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp ATAGTTCACTTTTGTAGCCATCCAGCCCAGTCAATTTaGATTGCTGTATCCACAACTGATCATCACCATGTG +
Preference number: 6 (lower is better)
Translates to: IVHFCSHPAQSI*IAVSTTDHHHV
Trigger: CACATGGTGATGATCAGTTGTGGATACAGCAATCAAAATTGACTGGGCTGGATGGCTACAAAAGTGAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438066.1
ENST00000471538.1
CDS CAA 90 bp TTCTCTTTCTCGTTCCCTTTGCCTGTAACTATATTCCCTAATATCTaGTTCATAAGGATCATTCCTGTAATCCCTGTATTCCCGAGGATC +
Preference number: 6 (lower is better)
Translates to: FSFSFPLPVTIFPNI*FIRIIPVIPVFPRI
Trigger: GATCCTCGGGAATACAGGGATTACAGGAATGATCCTTATGAACAAGATATTAGGGAATATAGTTACAGGCAAAGGGAACGAGAAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CAA 90 bp TTTCTCAACCTCTTTGGGTTTCTGGTCTTTTTCTTTTTCTTTCTGTaGCATCCGTGTGAGCTCCATAAATCTGCTATGGAACAGAACTAC +
Preference number: 6 (lower is better)
Translates to: FLNLFGFLVFFFFFL*HPCELHKSAMEQNY
Trigger: GTAGTTCTGTTCCATAGCAGATTTATGGAGCTCACACGGATGCAACAGAAAGAAAAAGAAAAAGACCAGAAACCCAAAGAGGTTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp AAACTCACATCAAATCTGCCAGCATCCTGTTTCATCTaGGAGTCCCAACGATTTAGTTCATCTTCAGAATTC +
Preference number: 6 (lower is better)
Translates to: KLTSNLPASCFI*ESQRFSSSSEF
Trigger: GAATTCTGAAGATGAACTAAATCGTTGGGACTCTCAGATGAAACAGGATGCTGGCAGATTTGATGTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS GCA 72 bp TCTTTGGGTTTCTGGTCTTTTTCTTTTTCTTTCTGTTaGATCCGTGTGAGCTCCATAAATCTGCTATGGAAC +
Preference number: 6 (lower is better)
Translates to: SLGFWSFSFSFC*IRVSSINLLWN
Trigger: GTTCCATAGCAGATTTATGGAGCTCACACGGATGCAACAGAAAGAAAAAGAAAAAGACCAGAAACCCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 72 bp CTCTTTGGGTTTCTGGTCTTTTTCTTTTTCTTTCTGTaGCATCCGTGTGAGCTCCATAAATCTGCTATGGAA +
Preference number: 6 (lower is better)
Translates to: LFGFLVFFFFFL*HPCELHKSAME
Trigger: TTCCATAGCAGATTTATGGAGCTCACACGGATGCAACAGAAAGAAAAAGAAAAAGACCAGAAACCCAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS TCA 72 bp CCTCTCTTCTTTCGGCTAACATTTCATAAAAGTCTCTaGTGTCTTGACCAGATTTCTCCATGCAGTGATAAA +
Preference number: 6 (lower is better)
Translates to: PLFFRLTFHKSL*CLDQISPCSDK
Trigger: TTTATCACTGCATGGAGAAATCTGGTCAAGACATCAGAGACTTTTATGAAATGTTAGCCGAAAGAAGAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CCA 72 bp ATAAATATTTCCAGCCCTAAGTATGAATCAGGTAGCTaGCAGAAGAGGAAATATCCTCTACAATTCCAACGA +
Preference number: 6 (lower is better)
Translates to: INISSPKYESGS*QKRKYPLQFQR
Trigger: TCGTTGGAATTGTAGAGGATATTTCCTCTTCTGCCAGCTACCTGATTCATACTTAGGGCTGGAAATATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438066.1
ENST00000471538.1
CDS CAA 72 bp TCGTTCCCTTTGCCTGTAACTATATTCCCTAATATCTaGTTCATAAGGATCATTCCTGTAATCCCTGTATTC +
Preference number: 6 (lower is better)
Translates to: SFPLPVTIFPNI*FIRIIPVIPVF
Trigger: GAATACAGGGATTACAGGAATGATCCTTATGAACAAGATATTAGGGAATATAGTTACAGGCAAAGGGAACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375759.8
ENST00000673875.1
CDS CAA 72 bp AGTTCATCTTCAGAATTCAAGACAGATAGTTTTATTTaGGCCATATCTGCCATCTGTTCTCTCCTGCTAGAA +
Preference number: 6 (lower is better)
Translates to: SSSSEFKTDSFI*AISAICSLLLE
Trigger: TTCTAGCAGGAGAGAACAGATGGCAGATATGGCCAAAATAAAACTATCTGTCTTGAATTCTGAAGATGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375759.8
CDS CAA 90 bp ATCCATCTTCTTAATAGCTTTACAAACGCTAGCAATATCACAGTATaGCAGAAACGCATACTGAGGAACTCCATTTACTTTCTTAATGTC +
Preference number: 6 (lower is better)
Translates to: IHLLNSFTNASNITV*QKRILRNSIYFLNV
Trigger: GACATTAAGAAAGTAAATGGAGTTCCTCAGTATGCGTTTCTGCAATACTGTGATATTGCTAGCGTTTGTAAAGCTATTAAGAAGATGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375759.8
ENST00000442985.1
ENST00000673875.1