Pregenerated sensors for SPEM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000181323Ensembl transcript IDs: ENST00000323675.4, ENST00000640564.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GTGAGCACAGCGTGTGGGAGAGCCTCGACGGCGATGGCGGTGAGCTaGGGGCGGGGACACAGTCATCATCACAGGGTCCATGGTGCACCG | + |
Preference number: 5 (lower is better) Translates to: VSTACGRASTAMAVS*GRGHSHHHRVHGAP Trigger: CGGTGCACCATGGACCCTGTGATGATGACTGTGTCCCCGCCCCCAGCTCACCGCCATCGCCGTCGAGGCTCTCCCACACGCTGTGCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 90 bp | CATCAGTGTCAGGAGCCCAAGCTACTGGGCAGTGAGCACAGCGTGTaGGAGAGCCTCGACGGCGATGGCGGTGAGCTGGGGGCGGGGACA | + |
Preference number: 5 (lower is better) Translates to: HQCQEPKLLGSEHSV*ESLDGDGGELGAGT Trigger: TGTCCCCGCCCCCAGCTCACCGCCATCGCCGTCGAGGCTCTCCCACACGCTGTGCTCACTGCCCAGTAGCTTGGGCTCCTGACACTGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS TCA 90 bp | AGGACAGAGTTGCCCAGGTCCTGGCAGCTGTTGCTGTTGCAGTTGTaGTACGAGGCCCACTCGGGCCTCGGCCGCTCAACCATGGCCATG | + |
Preference number: 5 (lower is better) Translates to: RTELPRSWQLLLLQL*YEAHSGLGRSTMAM Trigger: CATGGCCATGGTTGAGCGGCCGAGGCCCGAGTGGGCCTCGTATCACAACTGCAACAGCAACAGCTGCCAGGACCTGGGCAACTCTGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS TCA 90 bp | CCGAAGCCGCCGTCTCATGTCCCGGGCATCATACACTATTCGGCCTaGGGAGCGGTGCCGGGAAAATTCAGGGATGACTGCTGGGCCCAG | + |
Preference number: 5 (lower is better) Translates to: PKPPSHVPGIIHYSA*GAVPGKFRDDCWAQ Trigger: CTGGGCCCAGCAGTCATCCCTGAATTTTCCCGGCACCGCTCCTCAGGCCGAATAGTGTATGATGCCCGGGACATGAGACGGCGGCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 90 bp | CGTCTCATGTCCCGGGCATCATACACTATTCGGCCTGAGGAGCGGTaGCGGGAAAATTCAGGGATGACTGCTGGGCCCAGGGTGGGAGCT | + |
Preference number: 5 (lower is better) Translates to: RLMSRASYTIRPEER*RENSGMTAGPRVGA Trigger: AGCTCCCACCCTGGGCCCAGCAGTCATCCCTGAATTTTCCCGGCACCGCTCCTCAGGCCGAATAGTGTATGATGCCCGGGACATGAGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 90 bp | GTACTGATGAGGCTTCTCGTCATCAGTGTCAGGAGCCCAAGCTACTaGGCAGTGAGCACAGCGTGTGGGAGAGCCTCGACGGCGATGGCG | + |
Preference number: 5 (lower is better) Translates to: VLMRLLVISVRSPSY*AVSTACGRASTAMA Trigger: CGCCATCGCCGTCGAGGCTCTCCCACACGCTGTGCTCACTGCCCAGTAGCTTGGGCTCCTGACACTGATGACGAGAAGCCTCATCAGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 90 bp | CAGTTAGGGAACGGTACACCCAATTCTTGCTTGTCTCCTCGGCAGTaGTGGATCCAGAGGCTAGGGGGTAGCAGCCGGACAGGGCCTCCA | + |
Preference number: 5 (lower is better) Translates to: QLGNGTPNSCLSPRQ*WIQRLGGSSRTGPP Trigger: TGGAGGCCCTGTCCGGCTGCTACCCCCTAGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACCGTTCCCTAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 90 bp | TTAGGGAACGGTACACCCAATTCTTGCTTGTCTCCTCGGCAGTGCTaGATCCAGAGGCTAGGGGGTAGCAGCCGGACAGGGCCTCCACCT | + |
Preference number: 5 (lower is better) Translates to: LGNGTPNSCLSPRQC*IQRLGGSSRTGPPP Trigger: AGGTGGAGGCCCTGTCCGGCTGCTACCCCCTAGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACCGTTCCCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 90 bp | GGCGGGGACACAGTCATCATCACAGGGTCCATGGTGCACCGAAGATaGACTGCAGGAGAACTCTGCTTCTTAGGGGGCTGGGTCTGCTTT | + |
Preference number: 5 (lower is better) Translates to: GGDTVIITGSMVHRR*TAGELCFLGGWVCF Trigger: AAAGCAGACCCAGCCCCCTAAGAAGCAGAGTTCTCCTGCAGTCCATCTTCGGTGCACCATGGACCCTGTGATGATGACTGTGTCCCCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 90 bp | GGACACAGTCATCATCACAGGGTCCATGGTGCACCGAAGATGGACTaGAGGAGAACTCTGCTTCTTAGGGGGCTGGGTCTGCTTTCTGAG | + |
Preference number: 5 (lower is better) Translates to: GHSHHHRVHGAPKMD*RRTLLLRGLGLLSE Trigger: CTCAGAAAGCAGACCCAGCCCCCTAAGAAGCAGAGTTCTCCTGCAGTCCATCTTCGGTGCACCATGGACCCTGTGATGATGACTGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 90 bp | GATGACTTGGGAGCTTCTTTCTCACAAATGGTATCATGGAACACTTaGTATAAGACACCACGGAATCGGCTCCAGAGCAGGGTCACTATA | + |
Preference number: 5 (lower is better) Translates to: DDLGASFSQMVSWNT*YKTPRNRLQSRVTI Trigger: TATAGTGACCCTGCTCTGGAGCCGATTCCGTGGTGTCTTATACCAAGTGTTCCATGATACCATTTGTGAGAAAGAAGCTCCCAAGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 72 bp | GGTGGGAGCTGGGACAGGCTGGTACTGAGCCGCCTCTaGCTCTGGCACCGCCCCCTCCCCACCGTTCTTGTG | + |
Preference number: 6 (lower is better) Translates to: GGSWDRLVLSRL*LWHRPLPTVLV Trigger: CACAAGAACGGTGGGGAGGGGGCGGTGCCAGAGGCAGAGGCGGCTCAGTACCAGCCTGTCCCAGCTCCCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS TCA 72 bp | GCACAGCGTGTGGGAGAGCCTCGACGGCGATGGCGGTaGGCTGGGGGCGGGGACACAGTCATCATCACAGGG | + |
Preference number: 6 (lower is better) Translates to: AQRVGEPRRRWR*AGGGDTVIITG Trigger: CCCTGTGATGATGACTGTGTCCCCGCCCCCAGCTCACCGCCATCGCCGTCGAGGCTCTCCCACACGCTGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | CAGGAGCCCAAGCTACTGGGCAGTGAGCACAGCGTGTaGGAGAGCCTCGACGGCGATGGCGGTGAGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: QEPKLLGSEHSV*ESLDGDGGELG Trigger: CCCCAGCTCACCGCCATCGCCGTCGAGGCTCTCCCACACGCTGTGCTCACTGCCCAGTAGCTTGGGCTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | GCGTGTGGGAGAGCCTCGACGGCGATGGCGGTGAGCTaGGGGCGGGGACACAGTCATCATCACAGGGTCCAT | + |
Preference number: 6 (lower is better) Translates to: ACGRASTAMAVS*GRGHSHHHRVH Trigger: ATGGACCCTGTGATGATGACTGTGTCCCCGCCCCCAGCTCACCGCCATCGCCGTCGAGGCTCTCCCACACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 72 bp | GGACAGAGTTGCCCAGGTCCTGGCAGCTGTTGCTGTTaGAGTTGTGATACGAGGCCCACTCGGGCCTCGGCC | + |
Preference number: 6 (lower is better) Translates to: GQSCPGPGSCCC*SCDTRPTRASA Trigger: GGCCGAGGCCCGAGTGGGCCTCGTATCACAACTGCAACAGCAACAGCTGCCAGGACCTGGGCAACTCTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CAA 90 bp | CTCTGGGGCATCCTGAGACCAGGGAACCCAGGTCCCCTGAGTGTGTaGGAAGCCTTCCCAGTCCTCAGGGACATCCCAGTGGTAGGAGCA | + |
Preference number: 6 (lower is better) Translates to: LWGILRPGNPGPLSV*EAFPVLRDIPVVGA Trigger: TGCTCCTACCACTGGGATGTCCCTGAGGACTGGGAAGGCTTCCAACACACTCAGGGGACCTGGGTTCCCTGGTCTCAGGATGCCCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 72 bp | TCCCGGGCATCATACACTATTCGGCCTGAGGAGCGGTaGCGGGAAAATTCAGGGATGACTGCTGGGCCCAGG | + |
Preference number: 6 (lower is better) Translates to: SRASYTIRPEER*RENSGMTAGPR Trigger: CCTGGGCCCAGCAGTCATCCCTGAATTTTCCCGGCACCGCTCCTCAGGCCGAATAGTGTATGATGCCCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | AGGCTTCTCGTCATCAGTGTCAGGAGCCCAAGCTACTaGGCAGTGAGCACAGCGTGTGGGAGAGCCTCGACG | + |
Preference number: 6 (lower is better) Translates to: RLLVISVRSPSY*AVSTACGRAST Trigger: CGTCGAGGCTCTCCCACACGCTGTGCTCACTGCCCAGTAGCTTGGGCTCCTGACACTGATGACGAGAAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | GGTACACCCAATTCTTGCTTGTCTCCTCGGCAGTGCTaGATCCAGAGGCTAGGGGGTAGCAGCCGGACAGGG | + |
Preference number: 6 (lower is better) Translates to: GTPNSCLSPRQC*IQRLGGSSRTG Trigger: CCCTGTCCGGCTGCTACCCCCTAGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | CTGGGGGCGGGGACACAGTCATCATCACAGGGTCCATaGTGCACCGAAGATGGACTGCAGGAGAACTCTGCT | + |
Preference number: 6 (lower is better) Translates to: LGAGTQSSSQGP*CTEDGLQENSA Trigger: AGCAGAGTTCTCCTGCAGTCCATCTTCGGTGCACCATGGACCCTGTGATGATGACTGTGTCCCCGCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CAA 72 bp | ATCCTGAGACCAGGGAACCCAGGTCCCCTGAGTGTGTaGGAAGCCTTCCCAGTCCTCAGGGACATCCCAGTG | + |
Preference number: 6 (lower is better) Translates to: ILRPGNPGPLSV*EAFPVLRDIPV Trigger: CACTGGGATGTCCCTGAGGACTGGGAAGGCTTCCAACACACTCAGGGGACCTGGGTTCCCTGGTCTCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS TCA 72 bp | CCGTCTCATGTCCCGGGCATCATACACTATTCGGCCTaGGGAGCGGTGCCGGGAAAATTCAGGGATGACTGC | + |
Preference number: 6 (lower is better) Translates to: PSHVPGIIHYSA*GAVPGKFRDDC Trigger: GCAGTCATCCCTGAATTTTCCCGGCACCGCTCCTCAGGCCGAATAGTGTATGATGCCCGGGACATGAGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 72 bp | AACGGTACACCCAATTCTTGCTTGTCTCCTCGGCAGTaGTGGATCCAGAGGCTAGGGGGTAGCAGCCGGACA | + |
Preference number: 6 (lower is better) Translates to: NGTPNSCLSPRQ*WIQRLGGSSRT Trigger: TGTCCGGCTGCTACCCCCTAGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CAA 90 bp | TTTCCAGTCACCTCCCAGTTAGGGAACGGTACACCCAATTCTTGCTaGTCTCCTCGGCAGTGCTGGATCCAGAGGCTAGGGGGTAGCAGC | + |
Preference number: 6 (lower is better) Translates to: FPVTSQLGNGTPNSC*SPRQCWIQRLGGSS Trigger: GCTGCTACCCCCTAGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACCGTTCCCTAACTGGGAGGTGACTGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 72 bp | CATCATCACAGGGTCCATGGTGCACCGAAGATGGACTaGAGGAGAACTCTGCTTCTTAGGGGGCTGGGTCTG | + |
Preference number: 6 (lower is better) Translates to: HHHRVHGAPKMD*RRTLLLRGLGL Trigger: CAGACCCAGCCCCCTAAGAAGCAGAGTTCTCCTGCAGTCCATCTTCGGTGCACCATGGACCCTGTGATGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CAA 72 bp | ACCTCCCAGTTAGGGAACGGTACACCCAATTCTTGCTaGTCTCCTCGGCAGTGCTGGATCCAGAGGCTAGGG | + |
Preference number: 6 (lower is better) Translates to: TSQLGNGTPNSC*SPRQCWIQRLG Trigger: CCCTAGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACCGTTCCCTAACTGGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS GCA 72 bp | GTCACCTCCCAGTTAGGGAACGGTACACCCAATTCTTaGTTGTCTCCTCGGCAGTGCTGGATCCAGAGGCTA | + |
Preference number: 6 (lower is better) Translates to: VTSQLGNGTPNS*LSPRQCWIQRL Trigger: TAGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACCGTTCCCTAACTGGGAGGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | ACAGTCATCATCACAGGGTCCATGGTGCACCGAAGATaGACTGCAGGAGAACTCTGCTTCTTAGGGGGCTGG | + |
Preference number: 6 (lower is better) Translates to: TVIITGSMVHRR*TAGELCFLGGW Trigger: CCAGCCCCCTAAGAAGCAGAGTTCTCCTGCAGTCCATCTTCGGTGCACCATGGACCCTGTGATGATGACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CAA 72 bp | AGTCACCTCCCAGTTAGGGAACGGTACACCCAATTCTaGCTTGTCTCCTCGGCAGTGCTGGATCCAGAGGCT | + |
Preference number: 6 (lower is better) Translates to: SHLPVRERYTQF*LVSSAVLDPEA Trigger: AGCCTCTGGATCCAGCACTGCCGAGGAGACAAGCAAGAATTGGGTGTACCGTTCCCTAACTGGGAGGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | AGATGGACTGCAGGAGAACTCTGCTTCTTAGGGGGCTaGGTCTGCTTTCTGAGTAATGATGACTTGGGAGCT | + |
Preference number: 6 (lower is better) Translates to: RWTAGELCFLGG*VCFLSNDDLGA Trigger: AGCTCCCAAGTCATCATTACTCAGAAAGCAGACCCAGCCCCCTAAGAAGCAGAGTTCTCCTGCAGTCCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |
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CDS CCA 72 bp | GGAGCTTCTTTCTCACAAATGGTATCATGGAACACTTaGTATAAGACACCACGGAATCGGCTCCAGAGCAGG | + |
Preference number: 6 (lower is better) Translates to: GASFSQMVSWNT*YKTPRNRLQSR Trigger: CCTGCTCTGGAGCCGATTCCGTGGTGTCTTATACCAAGTGTTCCATGATACCATTTGTGAGAAAGAAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000323675.4 ENST00000640564.2 |