Pregenerated sensors for SPEGNB (Homo sapiens)
Ensembl gene IDs: ENSG00000286095Ensembl transcript IDs: ENST00000475104.1, ENST00000617028.1, ENST00000651166.1, ENST00000651166.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GAGAGCAGCTTTATTAAGCAAGCTGGTGGAGGGCTGTaGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: ESSFIKQAGGGL*VPPPPGSAPGR Trigger: CCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAGCTTGCTTAATAAAGCTGCTCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.1 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGGCTGGTGGAGGGCTGTaGGTCCCACCACCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVEGCGSHHPRARRQGGRAGGGL*VPPPPG Trigger: GCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAGC...CCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGGGCGTGGCCCGGCGAATaGTCAGCGTCGTGGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLWVPPPPGSAPGRKVRAWPGE*SASWWC Trigger: GCACCACCACGACGCTGACCATTCGCCGGGCCACGC...CCGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCCGGAAGGTCCGGGGGTaGCGTTCAGGCCACGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VEGCGSHHPRARRQGGRSRKVRG*RSGHVD Trigger: GTCGACGTGGCCTGAACGGCACCCCCGGACCTTCCG...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGTACTGGCCCAGGTCTaGCAGCTCGCCGTCGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VEGCGSHHPRARRQGGRSVLAQV*QLAVAH Trigger: GTGCGCGACGGCGAGCTGGCAGACCTGGGCCAGTAC...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCCGCTGTCCTGAGGCGTaGCCCGGCGAATGGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VEGCGSHHPRARRQGGRSRCPEA*PGEWSA Trigger: CGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCG...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTGTCCTCCCCGTCCTTaGTCCAGCCTACGTCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LVEGCGSHHPRARRQGGRCPPRP*SSLRRA Trigger: CGCCCGACGTAGGCTGGACCAAGGACGGGGAGGACA...CCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR TCA 90 bp | GGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCCGAAATGCGGCAAGTaGGCTTGGCCGCGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGGLWVPPPPGSAPGRKVPKCGK*AWPRCL Trigger: AAGGCAGCGCGGCCAAGCTCACTTGCCGCATTTCGG...GACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGGGCGTCGTGGTGGTGCTaGCGATCTCGAAGAACACCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLWVPPPPGSAPGRKVRASWWC*RSRRTP Trigger: GGGTGTTCTTCGAGATCGGCAGCACCACCACGACGC...CCGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGGGACTTCCACGAGGATaGGCGCCGAGTCGGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVEGCGSHHPRARRQGGRGLPRG*APSRST Trigger: AGTGCTCCGACTCGGCGCGCATCCTCGTGGAAGTCC...CCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGGACGCGAGCGAAGCTCTaGTCCATGCCCAGGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGLWVPPPPGSAPGRKVRTRAKL*SMPRLF Trigger: GAACAGCCTGGGCATGGACCAGAGCTTCGCTCGCGT...CCGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTGCCGAGTCGGAGCACTaGCCGAAGGGGTTGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: WWRAVGPTTPGLGARAEGAESEH*PKGLVT Trigger: CGTCACCAACCCCTTCGGCCAGTGCTCCGACTCGGC...ACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGCGTACACCTCGTACTTaGCGCTGTCCTGAGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVEGCGSHHPRARRQGGRRTPRT*RCPEAW Trigger: CCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACG...CCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGGCGAAGCTCTGGTCCATaGCCAGGCTGTTCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLWVPPPPGSAPGRKVRRSSGP*PGCSPR Trigger: ACGTGGAGAACAGCCTGGGCATGGACCAGAGCTTCG...CCGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGTGGGGCCACAGCCACTaGCTTTTTGGCAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WRAVGPTTPGLGARAEGPWGHSH*LFGRSC Trigger: GCAGCTCCTGCCAAAAAGCCAGTGGCTGTGGCCCCA...CGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGGACGTTGATGCTGTACTaGCCCAGGTCTGCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GGLWVPPPPGSAPGRKVRTLMLY*PRSASS Trigger: CGAGCTGGCAGACCTGGGCCAGTACAGCATCAACGT...CCGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR TCA 90 bp | TGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCTTACTCCAGCGGATaGATGGGTCCGGGAAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WWRAVGPTTPGLGARAEGPYSSG*MGPGKP Trigger: CGGCTTTCCCGGACCCATTCATCCGCTGGAGTAAGG...ACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTGGTCAGCGTCGTGGTaGTGCTGCCGATCTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVEGCGSHHPRARRQGGRWSASW*CCRSRR Trigger: TCTTCGAGATCGGCAGCACCACCACGACGCTGACCA...CCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGAATGGTCAGCGTCGTaGTGGTGCTGCCGATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VEGCGSHHPRARRQGGRSEWSAS*WCCRSR Trigger: TCGAGATCGGCAGCACCACCACGACGCTGACCATTC...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTGGTACATCCAGGAGCTaGGGCCACAGCCACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WWRAVGPTTPGLGARAEGGTSRS*GHSHWL Trigger: AAGCCAGTGGCTGTGGCCCCAGCTCCTGGATGTACC...ACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGAGGCCTGGATACGAATaGCCGCACTCTGGACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WRAVGPTTPGLGARAEGPRPGYE*PHSGPV Trigger: CACAGGTCCAGAGTGCGGCCATTCGTATCCAGGCCT...CGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGGGACCTGTGGGTCATTaGTGTCCAGGGTACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVEGCGSHHPRARRQGGRGPVGH*CPGYIQ Trigger: CTGGATGTACCCTGGACATCAATGACCCACAGGTCC...CCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCAGCGTCGTGGTGGTaGTGCCGATCTCGAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVEGCGSHHPRARRQGGRSASWW*CRSRRT Trigger: TGTTCTTCGAGATCGGCAGCACCACCACGACGCTGA...CCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | TGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCGTCACGTAGCTCCTTaGCGTCCTTACTCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WWRAVGPTTPGLGARAEGRHVAP*RPYSSG Trigger: TCCGCTGGAGTAAGGACGGCAAGGAGCTACGTGACG...ACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGCGCACTCTGGACCTGTaGGTCATTGATGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRAVGPTTPGLGARAEGPRTLDL*VIDVQG Trigger: ACCCTGGACATCAATGACCCACAGGTCCAGAGTGCG...CGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCAGACGTAGCGGTACTTaGGACCGTCACGTAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGLWVPPPPGSAPGRKVRRSGT*DRHVAP Trigger: AGGAGCTACGTGACGGTCCCAAGTACCGCTACGTCT...GACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR TCA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCTTGTCGGGTCCCTTTTaGATCTTCGTCGGGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VEGCGSHHPRARRQGGRSLSGPF*IFVGTS Trigger: GGAAGTCCCGACGAAGATTCAAAAGGGACCCGACAA...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCACTCCAGCGGATGAATaGGTCCGGGAAAGCCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VEGCGSHHPRARRQGGRSTPADE*VRESRN Trigger: ATTTCGGCTTTCCCGGACCCATTCATCCGCTGGAGT...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR TCA 90 bp | GAGGGTCAGAGAGCAGCTTTATTAAGCAAGCTGGTGGAGGGCTGTGGGTCCCACTACTTGCCGCTGTCCTaGGGCGTGGCCCGGCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: EGQRAALLSKLVEGCGSHYLPLS*GVARRM Trigger: CATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTA...GTGGGACCCACAGCCCTCCACCAGCTTGCTTAATAAAGCTGCTCTCTGACCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR GCA 90 bp | GAGGGTCAGAGAGCAGCTTTATTAAGCAAGCTGGTGGAGGGCTGTGGGTCCCACGTCGCGCACCACCAGTaGCACCACGTCAGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGQRAALLSKLVEGCGSHVAHHQ*HHVRVL Trigger: GAGGACCCTGACGTGGTGGCACTGGTGGTGCGCGAC...GTGGGACCCACAGCCCTCCACCAGCTTGCTTAATAAAGCTGCTCTCTGACCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCAGAGAGCAGCTTTATTAAGCAAGCTGGTGGAGGGCTGTGGGTCCCACCGAATGGCCGCACTCTaGACCTGTGGGTCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: EGQRAALLSKLVEGCGSHRMAAL*TCGSLM Trigger: CATCAATGACCCACAGGTCCAGAGTGCGGCCATTCG...GTGGGACCCACAGCCCTCCACCAGCTTGCTTAATAAAGCTGCTCTCTGACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGGATGTCCTCCCCGTCCTaGGTCCAGCCTACGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLWVPPPPGSAPGRKVRMSSPS*VQPTSG Trigger: GCCCGACGTAGGCTGGACCAAGGACGGGGAGGACAT...CCGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGGGTCACGGTGGTGCCTTaGCGCGCCTTAGTGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGLWVPPPPGSAPGRKVRVTVVP*RALVLS Trigger: CGACAACACTAAGGCGCGCAAAGGCACCACCGTGAC...CCGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGATGCGGCAAGTGAGCTaGGCCGCGCTGCCTTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: WRAVGPTTPGLGARAEGPMRQVS*AALPSI Trigger: GATCGAAGGCAGCGCGGCCAAGCTCACTTGCCGCAT...CGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | TGGTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGTCACGTAGCTCCTaGCCGTCCTTACTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WWRAVGPTTPGLGARAEGPSRSS*PSLLQR Trigger: CCGCTGGAGTAAGGACGGCAAGGAGCTACGTGACGG...ACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCACCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCAAGGGGTTGGTGACGTaGATGCTGTACTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VEGCGSHHPRARRQGGRSKGLVT*MLYWPR Trigger: CCTGGGCCAGTACAGCATCAACGTCACCAACCCCTT...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGCACTGGCCGAAGGGGTaGGTGACGTTGATGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WRAVGPTTPGLGARAEGPHWPKG*VTLMLY Trigger: GTACAGCATCAACGTCACCAACCCCTTCGGCCAGTG...CGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGACAGCCACTGGCTTTTaGGCAGGAGCTGCTTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WRAVGPTTPGLGARAEGPTATGF*AGAALD Trigger: GTCTAAAGCAGCTCCTGCCAAAAAGCCAGTGGCTGT...CGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGTGGACCTGTGGGTCATaGATGTCCAGGGTACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: WRAVGPTTPGLGARAEGPWTCGS*MSRVHP Trigger: TGGATGTACCCTGGACATCAATGACCCACAGGTCCA...CGGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGGCTGTGGGTCCCACCACCCCCGGGCTCGGCGCCAGGGCGGAAGGTCCGTTGTCGGGTCCCTTTaGAATCTTCGTCGGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VEGCGSHHPRARRQGGRSVVGSL*NLRRDF Trigger: GAAGTCCCGACGAAGATTCAAAAGGGACCCGACAAC...GGACCTTCCGCCCTGGCGCCGAGCCCGGGGGTGGTGGGACCCACAGCCCTCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617028.1 |
||
| CDS TCA 90 bp | ATGCCCAGGCTGTTCTCCACGTACACCTCGTACTTGCCGCTGTCCTaGGGCGTGGCCCGGCGAATGGTCAGCGTCGTGGTGGTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MPRLFSTYTSYLPLS*GVARRMVSVVVVLP Trigger: CGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACGTGGAGAACAGCCTGGGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 90 bp | AGGTCCGGGGGTGCCGTTCAGGCCACGTCGACGCGAGCGAAGCTCTaGTCCATGCCCAGGCTGTTCTCCACGTACACCTCGTACTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSGGAVQATSTRAKL*SMPRLFSTYTSYLP Trigger: CGGCAAGTACGAGGTGTACGTGGAGAACAGCCTGGGCATGGACCAGAGCTTCGCTCGCGTCGACGTGGCCTGAACGGCACCCCCGGACCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS GCA 90 bp | AGCTCTGGTCCATGCCCAGGCTGTTCTCCACGTACACCTCGTACTTaGCGCTGTCCTGAGGCGTGGCCCGGCGAATGGTCAGCGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGPCPGCSPRTPRT*RCPEAWPGEWSASW Trigger: CCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACGTGGAGAACAGCCTGGGCATGGACCAGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS GCA 90 bp | GGGGTGCCGTTCAGGCCACGTCGACGCGAGCGAAGCTCTGGTCCATaGCCAGGCTGTTCTCCACGTACACCTCGTACTTGCCGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVPFRPRRRERSSGP*PGCSPRTPRTCRCP Trigger: AGGACAGCGGCAAGTACGAGGTGTACGTGGAGAACAGCCTGGGCATGGACCAGAGCTTCGCTCGCGTCGACGTGGCCTGAACGGCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 90 bp | GGCTGTTCTCCACGTACACCTCGTACTTGCCGCTGTCCTGAGGCGTaGCCCGGCGAATGGTCAGCGTCGTGGTGGTGCTGCCGATCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSPRTPRTCRCPEA*PGEWSASWWCCRSR Trigger: TCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACGTGGAGAACAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS GCA 90 bp | CGCTGTCCTGAGGCGTGGCCCGGCGAATGGTCAGCGTCGTGGTGGTaGTGCCGATCTCGAAGAACACCCTGTCATCCTCCTCGATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCPEAWPGEWSASWW*CRSRRTPCHPPRCP Trigger: AGGACATCGAGGAGGATGACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 90 bp | TGCCGCTGTCCTGAGGCGTGGCCCGGCGAATGGTCAGCGTCGTGGTaGTGCTGCCGATCTCGAAGAACACCCTGTCATCCTCCTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: CRCPEAWPGEWSASW*CCRSRRTPCHPPRC Trigger: ACATCGAGGAGGATGACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 90 bp | ACTTGCCGCTGTCCTGAGGCGTGGCCCGGCGAATGGTCAGCGTCGTaGTGGTGCTGCCGATCTCGAAGAACACCCTGTCATCCTCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TCRCPEAWPGEWSAS*WCCRSRRTPCHPPR Trigger: TCGAGGAGGATGACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 90 bp | CGTACACCTCGTACTTGCCGCTGTCCTGAGGCGTGGCCCGGCGAATaGTCAGCGTCGTGGTGGTGCTGCCGATCTCGAAGAACACCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RTPRTCRCPEAWPGE*SASWWCCRSRRTPC Trigger: ACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS TCA 90 bp | AAGAGGCCTGGATACGAATGGCCGCACTCTGGACCTGTGGGTCATTaGTGTCCAGGGTACATCCAGGAGCTGGGGCCACAGCCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRPGYEWPHSGPVGH*CPGYIQELGPQPLA Trigger: AGCCAGTGGCTGTGGCCCCAGCTCCTGGATGTACCCTGGACATCAATGACCCACAGGTCCAGAGTGCGGCCATTCGTATCCAGGCCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS TCA 90 bp | GTCACGGTGGTGCCTTTGCGCGCCTTAGTGTTGTCGGGTCCCTTTTaGATCTTCGTCGGGACTAGCGGAAGGAAAGGGGAGCGAAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTVVPLRALVLSGPF*IFVGTSGRKGERNP Trigger: GGGGTTTCGCTCCCCTTTCCTTCCGCTAGTCCCGACGAAGATTCAAAAGGGACCCGACAACACTAAGGCGCGCAAAGGCACCACCGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475104.1 |
||
| CDS CCA 72 bp | CCACGTACACCTCGTACTTGCCGCTGTCCTGAGGCGTaGCCCGGCGAATGGTCAGCGTCGTGGTGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRTPRTCRCPEA*PGEWSASWWCC Trigger: GCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CAA 90 bp | ACTTCCACGAGGATGCGCGCCGAGTCGGAGCACTGGCCGAAGGGGTaGGTGACGTTGATGCTGTACTGGCCCAGGTCTGCCAGCTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TSTRMRAESEHWPKG*VTLMLYWPRSASSP Trigger: CGGCGAGCTGGCAGACCTGGGCCAGTACAGCATCAACGTCACCAACCCCTTCGGCCAGTGCTCCGACTCGGCGCGCATCCTCGTGGAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 72 bp | CGTACTTGCCGCTGTCCTGAGGCGTGGCCCGGCGAATaGTCAGCGTCGTGGTGGTGCTGCCGATCTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTCRCPEAWPGE*SASWWCCRSRR Trigger: TCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 72 bp | GGTGCCGTTCAGGCCACGTCGACGCGAGCGAAGCTCTaGTCCATGCCCAGGCTGTTCTCCACGTACACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GAVQATSTRAKL*SMPRLFSTYTS Trigger: CGAGGTGTACGTGGAGAACAGCCTGGGCATGGACCAGAGCTTCGCTCGCGTCGACGTGGCCTGAACGGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CAA 72 bp | AGGATGCGCGCCGAGTCGGAGCACTGGCCGAAGGGGTaGGTGACGTTGATGCTGTACTGGCCCAGGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RMRAESEHWPKG*VTLMLYWPRSA Trigger: GGCAGACCTGGGCCAGTACAGCATCAACGTCACCAACCCCTTCGGCCAGTGCTCCGACTCGGCGCGCATCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS TCA 72 bp | CTGTTCTCCACGTACACCTCGTACTTGCCGCTGTCCTaGGGCGTGGCCCGGCGAATGGTCAGCGTCGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LFSTYTSYLPLS*GVARRMVSVVV Trigger: CACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACGTGGAGAACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS GCA 72 bp | GCGTGGCCCGGCGAATGGTCAGCGTCGTGGTGGTGCTaGCGATCTCGAAGAACACCCTGTCATCCTCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: AWPGEWSASWWC*RSRRTPCHPPR Trigger: TCGAGGAGGATGACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS GCA 72 bp | GAGGCGTGGCCCGGCGAATGGTCAGCGTCGTGGTGGTaGTGCCGATCTCGAAGAACACCCTGTCATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EAWPGEWSASWW*CRSRRTPCHPP Trigger: AGGAGGATGACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS GCA 72 bp | CCATGCCCAGGCTGTTCTCCACGTACACCTCGTACTTaGCGCTGTCCTGAGGCGTGGCCCGGCGAATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCPGCSPRTPRT*RCPEAWPGEWS Trigger: TGACCATTCGCCGGGCCACGCCTCAGGACAGCGGCAAGTACGAGGTGTACGTGGAGAACAGCCTGGGCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 72 bp | CCTGAGGCGTGGCCCGGCGAATGGTCAGCGTCGTGGTaGTGCTGCCGATCTCGAAGAACACCCTGTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PEAWPGEWSASW*CCRSRRTPCHP Trigger: AGGATGACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CAA 90 bp | CAGCGGATGAATGGGTCCGGGAAAGCCGAAATGCGGCAAGTGAGCTaGGCCGCGCTGCCTTCGATCAGCACCACGTCCTTCAGCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QRMNGSGKAEMRQVS*AALPSISTTSFSGS Trigger: GGAGCCGCTGAAGGACGTGGTGCTGATCGAAGGCAGCGCGGCCAAGCTCACTTGCCGCATTTCGGCTTTCCCGGACCCATTCATCCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 72 bp | TGTCCTGAGGCGTGGCCCGGCGAATGGTCAGCGTCGTaGTGGTGCTGCCGATCTCGAAGAACACCCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CPEAWPGEWSAS*WCCRSRRTPCH Trigger: ATGACAGGGTGTTCTTCGAGATCGGCAGCACCACCACGACGCTGACCATTCGCCGGGCCACGCCTCAGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS GCA 72 bp | TTCAGGCCACGTCGACGCGAGCGAAGCTCTGGTCCATaGCCAGGCTGTTCTCCACGTACACCTCGTACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FRPRRRERSSGP*PGCSPRTPRTC Trigger: GCAAGTACGAGGTGTACGTGGAGAACAGCCTGGGCATGGACCAGAGCTTCGCTCGCGTCGACGTGGCCTGAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000475104.1 ENST00000617028.1 ENST00000651166.2 |
||
| CDS CCA 72 bp | CCACCACGTCAGGGTCCTCGAAGACGTAGCGGTACTTaGGACCGTCACGTAGCTCCTTGCCGTCCTTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPRQGPRRRSGT*DRHVAPCRPYS Trigger: GGAGTAAGGACGGCAAGGAGCTACGTGACGGTCCCAAGTACCGCTACGTCTTCGAGGACCCTGACGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS CAA 72 bp | AATGGGTCCGGGAAAGCCGAAATGCGGCAAGTGAGCTaGGCCGCGCTGCCTTCGATCAGCACCACGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NGSGKAEMRQVS*AALPSISTTSF Trigger: GAAGGACGTGGTGCTGATCGAAGGCAGCGCGGCCAAGCTCACTTGCCGCATTTCGGCTTTCCCGGACCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS TCA 72 bp | GGATACGAATGGCCGCACTCTGGACCTGTGGGTCATTaGTGTCCAGGGTACATCCAGGAGCTGGGGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GYEWPHSGPVGH*CPGYIQELGPQ Trigger: CTGTGGCCCCAGCTCCTGGATGTACCCTGGACATCAATGACCCACAGGTCCAGAGTGCGGCCATTCGTATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS TCA 72 bp | GTGCCTTTGCGCGCCTTAGTGTTGTCGGGTCCCTTTTaGATCTTCGTCGGGACTTCCACGAGGATGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VPLRALVLSGPF*IFVGTSTRMRA Trigger: GGCGCGCATCCTCGTGGAAGTCCCGACGAAGATTCAAAAGGGACCCGACAACACTAAGGCGCGCAAAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS CAA 72 bp | GGTGCCTTTGCGCGCCTTAGTGTTGTCGGGTCCCTTTaGAATCTTCGTCGGGACTTCCACGAGGATGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GAFARLSVVGSL*NLRRDFHEDAR Trigger: GCGCGCATCCTCGTGGAAGTCCCGACGAAGATTCAAAAGGGACCCGACAACACTAAGGCGCGCAAAGGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000617028.1 ENST00000651166.2 |
||
| CDS TCA 72 bp | GTGCCTTTGCGCGCCTTAGTGTTGTCGGGTCCCTTTTaGATCTTCGTCGGGACTAGCGGAAGGAAAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VPLRALVLSGPF*IFVGTSGRKGE Trigger: CTCCCCTTTCCTTCCGCTAGTCCCGACGAAGATTCAAAAGGGACCCGACAACACTAAGGCGCGCAAAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475104.1 |
||
| CDS TCA 72 bp | TGCTTTAGACATCGTGGAGGGGTTGACCTAGGGACTTaGGTCGACTGGCTGGATTGCAGGCAGCACAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CFRHRGGVDLGT*VDWLDCRQHRA Trigger: GGCTCTGTGCTGCCTGCAATCCAGCCAGTCGACTCAAGTCCCTAGGTCAACCCCTCCACGATGTCTAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651166.2 |
||