RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPEG (Homo sapiens)

Ensembl gene IDs: ENSG00000072195

Ensembl transcript IDs: ENST00000312358.12, ENST00000396686.5, ENST00000396688.5, ENST00000396689.2, ENST00000396698.5, ENST00000403148.6, ENST00000409595.2, ENST00000420132.5, ENST00000431523.5, ENST00000435853.5, ENST00000451076.1, ENST00000452101.1, ENST00000462545.5, ENST00000463218.5, ENST00000464989.5, ENST00000475921.1, ENST00000485069.1, ENST00000485813.5, ENST00000491248.1, ENST00000496786.5, ENST00000497065.1, ENST00000498378.5

Found 1232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACGCTGCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCACTaGCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTGCCCCACCAGC +
Preference number: 1 (lower is better)
Translates to: GRCLGCPGGGGCHPH*PLPAPGPSARCPTS
Trigger: GCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGCAGCGTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR GCA 90 bp GGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCACTGCCCGCTTCCTaGTCCAGGACCGTCTGCCCGCTGCCCCACCAGCTCACTTGCTCC +
Preference number: 1 (lower is better)
Translates to: GLPGRRRVPPPLPAS*SRTVCPLPHQLTCS
Trigger: GGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR GCA 90 bp ACCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCGGCGGGTaGCACCCCCACTGCCCGCTTCCTGCTCCAGGACCGTCTGCCCGC +
Preference number: 1 (lower is better)
Translates to: TRSEGRCLGCPGGGG*HPHCPLPAPGPSAR
Trigger: GCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR GCA 90 bp GTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGC +
Preference number: 1 (lower is better)
Translates to: VGLRWPVEAEGRAPP*ATRSEGRCLGCPGG
Trigger: GCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR CCA 90 bp CGGATTTGGAAGGAGGCGGCTGGGCAGGGCGGCGTGGGGCTTCGCTaGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGC +
Preference number: 1 (lower is better)
Translates to: RIWKEAAGQGGVGLR*PVEAEGRAPPCATR
Trigger: GCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAGCCGCCTCCTTCCAAATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR TCA 90 bp TGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTaGGCAGCAGGGTGTGCCGCTCACCCTCAGCCCGGAGGAGGAGGC +
Preference number: 1 (lower is better)
Translates to: WRWPYSSRHLLPWPP*AAGCAAHPQPGGGG
Trigger: GCCTCCTCCTCCGGGCTGAGGGTGAGCGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR GCA 90 bp GCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTaGCCTGGCCTCCCTGAGCAGCAGGGTGTGCCGCTCACCCTCAGC +
Preference number: 1 (lower is better)
Translates to: AQLVGGGGHIAPGIC*PGLPEQQGVPLTLS
Trigger: GCTGAGGGTGAGCGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR GCA 90 bp CTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTaGTGCCCTGGCCTCCCTGAGCAGCAGGGTGTGCCGCTCACCCTC +
Preference number: 1 (lower is better)
Translates to: LAQLVGGGGHIAPGI*CPGLPEQQGVPLTL
Trigger: GAGGGTGAGCGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR CCA 90 bp AAGCCCCAGGCCCGCCTGGCTCAGCGTGGGCCCTGGAATGTCCCGTaGCATTGGTGGGAACCCCAGTTGAAGCCCGAGGCCTGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: KPQARLAQRGPWNVP*HWWEPQLKPEAWLW
Trigger: CCACAGCCAGGCCTCGGGCTTCAACTGGGGTTCCCACCAATGCCACGGGACATTCCAGGGCCCACGCTGAGCCAGGCGGGCCTGGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR CCA 90 bp CAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTaGCTCAGCGTGGGCCCTGGAATGTCCCGTGGCATTGGTGGGAAC +
Preference number: 1 (lower is better)
Translates to: QPDVAAGGNRSPRPA*LSVGPGMSRGIGGN
Trigger: GTTCCCACCAATGCCACGGGACATTCCAGGGCCCACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR CCA 90 bp CCCGTGGGGGTGCTGAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTaGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTCTGAG +
Preference number: 1 (lower is better)
Translates to: PVGVLKAPSSRSSRR*VPCTSLMSSSAVSE
Trigger: CTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTCAGCACCCCCACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR GCA 90 bp CTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCCATaGAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTC +
Preference number: 1 (lower is better)
Translates to: LLPIRPHMENRAPSP*RGVLVSRPPFCWVL
Trigger: GAGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR TCA 90 bp GCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTaGCTGCTGGCCTCCAGCTCTCCACATTTCTCCTCTGAGGGATGC +
Preference number: 1 (lower is better)
Translates to: AQGCIHWTGGQSECE*LLASSSPHFSSEGC
Trigger: GCATCCCTCAGAGGAGAAATGTGGAGAGCTGGAGGCCAGCAGTCACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR TCA 90 bp CCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCTCTGAGTCGTAACTTTGCTTTCTGC +
Preference number: 1 (lower is better)
Translates to: PRHPEAPGAGFPAHR*CHPQPSLSRNFAFC
Trigger: GCAGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR GCA 90 bp AGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGACTaGTGGCCTCCAGCTCTCCACATTTCTCCTCTGAGGGATGCTGAC +
Preference number: 1 (lower is better)
Translates to: RAVSTGQEDRASVSD*WPPALHISPLRDAD
Trigger: GTCAGCATCCCTCAGAGGAGAAATGTGGAGAGCTGGAGGCCAGCAGTCACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR GCA 90 bp GTCAGTGTCCTAACCCTTCCTGGTAAGGCCTTTGTCAACAGCCCCTaGTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCT +
Preference number: 1 (lower is better)
Translates to: VSVLTLPGKAFVNSP*SLGPSMPCRNLSHS
Trigger: AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGCCTTACCAGGAAGGGTTAGGACACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR CCA 90 bp GCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGACTGCTaGCCTCCAGCTCTCCACATTTCTCCTCTGAGGGATGCTGACAGC +
Preference number: 1 (lower is better)
Translates to: AVSTGQEDRASVSDC*PPALHISPLRDADS
Trigger: GCTGTCAGCATCCCTCAGAGGAGAAATGTGGAGAGCTGGAGGCCAGCAGTCACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR CCA 90 bp GACAGACAGACAGCTGGATGGCTGGGAGGGATGGTCAGGACAACATaGGCAGTAGGGATCGGATGGAAGGGGAAACTTCATAAAAGTCAA +
Preference number: 1 (lower is better)
Translates to: DRQTAGWLGGMVRTT*AVGIGWKGKLHKSQ
Trigger: TTGACTTTTATGAAGTTTCCCCTTCCATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCTGTCTGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp GCTGGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCTGAGGGACGCTGCTTaGGCTGCCCGGGAGGCGGCG +
Preference number: 2 (lower is better)
Translates to: AGQGGVGLRWPVEAEGRALRDAA*AAREAA
Trigger: CGCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAG...AGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR CAA 90 bp GGAAGGAGGCGGCTGGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTaGAGGCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: GRRRLGRAAWGFAGQ*RLKVGLLPAQPALR
Trigger: CCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAGCCGCCTCCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR-3UTR GCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGCGAGGTCCGAGAGGTaGCTGAGACAGGGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQARSER*LRQGRG
Trigger: GCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR GCA 90 bp GCTGGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTGGACCGTCTGCCCGCTaGCCCACCAGCTCACTTGCT +
Preference number: 2 (lower is better)
Translates to: AGQGGVGLRWPVEAEGRAGPSAR*PTSSLA
Trigger: AGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCC...AGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR-3UTR GCA 90 bp GCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCTGCTCCAGGACCGTCTaGCCGCTGCCCCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: AEGRAPPCATRSEGRCLGCSRTV*PLPHQL
Trigger: GAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCA...GCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR-3UTR TCA 90 bp ACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCCTGCCCTGGCCTCCCTaGGCAGCAGGGTGTGCCGCT +
Preference number: 2 (lower is better)
Translates to: TGGLAQLVGGGGHIAPGILPWPP*AAGCAA
Trigger: AGCGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAG...GATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR-3UTR GCA 90 bp CTGGCCTCCCTGAGCAGCAGGGTGTGCCGCTCACCCTCAGCCCGGAGGAGGAGGGCTGACCCATCCTTGTaGCAGGACACTTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: LASLSSRVCRSPSARRRRADPSL*QDTWGG
Trigger: CCCGCCCCAAGTGTCCTGGCACAAGGATGGGTCAGC...CCTCCTCCTCCGGGCTGAGGGTGAGCGGCACACCCTGCTGCTCAGGGAGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR-3UTR TCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGGTCCGAGAGGTGCCTaGGACAGGGGCGCGGCTCGG +
Preference number: 2 (lower is better)
Translates to: PVAAVAHALARCSPSGRDGPRGA*DRGAAR
Trigger: CCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR GCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATGCGAGGTCCGAGAGGTaGCTGAGACAGGGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYARSER*LRQGRG
Trigger: GCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGC...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGTGGGAACCCCAGTTaGAGCCCGAGGCCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGGNPS*SPRPGC
Trigger: ACAGCCAGGCCTCGGGCTTCAACTGGGGTTCCCACC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR TCA 90 bp TGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCTCGCTGCGCAGCGCTaGCCCATCCTTGTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: WPGPARWWRWPYSSRHLLLAAQR*PILVPG
Trigger: TCCTGGCACAAGGATGGGTCAGCGCTGCGCAGCGAG...CAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCGCCTGGCTCAGCGTaGGCCCTGGAATGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPPGSA*ALECPV
Trigger: CACGGGACATTCCAGGGCCCACGCTGAGCCAGGCGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR GCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTT +
Preference number: 2 (lower is better)
Translates to: PSPDREGGGPKWALNLPGVGLLA*TAMCPL
Trigger: AAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCAC...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR GCA 90 bp TCTGAGGTGCCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCCCACCAGGAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCC +
Preference number: 2 (lower is better)
Translates to: SEVPVTEVGGVSREVPTRRRWVP*TSLMSS
Trigger: GGATGACATCAGCGATGTGCAGGGAACCCAGCGCCT...CCTGGTGGGCACCTCCCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420132.5
3UTR-3UTR GCA 90 bp CTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTCTTGAGCAGCACATCTaGCCCTGGTGCCACCACCAC +
Preference number: 2 (lower is better)
Translates to: LAQLVGGGGHIAPGICCPLEQHI*PWCHHH
Trigger: GTGGTGGTGGCACCAGGGGCAGATGTGCTGCTCAAG...AGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR-3UTR CCA 90 bp ACCCAGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTGGGGGCCTGGTCGGGTaGGTGGTAGATAAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TQSMQGCASEPPSLLLGPGGLVG*VVDKCG
Trigger: CCCACACTTATCTACCACCCACCCGACCAGGCCCCC...AGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR-3UTR GCA 90 bp CTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTCACATCTGCCCCTGGTaGCACCACCACATTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LAQLVGGGGHIAPGICCPHICPW*HHHILQ
Trigger: CTGCAGAATGTGGTGGTGGCACCAGGGGCAGATGTG...AGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGCTCAGCGTGGGCCCTaGAATGTCCCGTGGCATTGG +
Preference number: 2 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPAQRGP*NVPWHW
Trigger: CCAATGCCACGGGACATTCCAGGGCCCACGCTGAGC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp CACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCAGCACATCTGCCCCTaGTGCCACCACCACATTCTG +
Preference number: 2 (lower is better)
Translates to: HRWPGPARWWRWPYSSRHQHICP*CHHHIL
Trigger: CAGAATGTGGTGGTGGCACCAGGGGCAGATGTGCTG...ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR-3UTR TCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGCGAGGCATCCTTCCCTaGCTGTCACAGACACACAGA +
Preference number: 2 (lower is better)
Translates to: PSPDREGGGPKWALNLPGRGILP*LSQTHR
Trigger: TCTGTGTGTCTGTGACAGTCAGGGAAGGATGCCTCG...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR TCA 90 bp CCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCCCACCAGGGTGTCAGAATTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCT +
Preference number: 2 (lower is better)
Translates to: PVTEVGGVSREVPTRVSEFPAHR*CHPQPS
Trigger: AGACGGCTGAGGATGACATCAGCGATGTGCAGGGAA...TTCTGACACCCTGGTGGGCACCTCCCTGGACACACCCCCGACCTCCGTGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420132.5
3UTR-3UTR GCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTT +
Preference number: 2 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRVGLLA*TAMCPL
Trigger: AAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCAC...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR GCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCATGCACTCGCCCGGTaGTCCCCTTCAGGGAGAGAC +
Preference number: 2 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLHALAR*SPSGRD
Trigger: GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR GCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTAGCAGCAGTAGCACATaGACTCGCCCGGTGCTCCCC +
Preference number: 2 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSSSSST*TRPVLP
Trigger: GGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCT...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGTCCCGTGGCATTGGTaGGAACCCCAGTTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPVPWHW*EPQLKP
Trigger: GGGCTTCAACTGGGGTTCCCACCAATGCCACGGGAC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCCTGGAATGTCCCGTaGCATTGGTGGGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPWNVP*HWWEPQ
Trigger: CTGGGGTTCCCACCAATGCCACGGGACATTCCAGGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTATGGGTCTCCCACTCTaGCTTTGGCCTGGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPMGLPL*LWPGVA
Trigger: TGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCAT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp TCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTCTGAGGGGGGCCTGGTCGGGTaGGTGGTAGATAAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SRRWVPCTSLMSSSAVSEGGLVG*VVDKCG
Trigger: CCCACACTTATCTACCACCCACCCGACCAGGCCCCC...CTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR-3UTR CCA 90 bp GGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCCCATTAGGCCTCACATaGAGAACAGGGCACCCAGTC +
Preference number: 2 (lower is better)
Translates to: GPVIPKLQALGSLHIADVPLGLT*RTGHPV
Trigger: GACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGG...GACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR-3UTR GCA 90 bp CTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTGCCACCACCACATTCTaGAGGGGGATCTCAAACACA +
Preference number: 2 (lower is better)
Translates to: LVGGGGHIAPGICCPGLPATTTF*RGISNT
Trigger: TGTGTTTGAGATCCCCCTGCAGAATGTGGTGGTGGC...AGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR-3UTR CCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTCATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTC +
Preference number: 2 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSHLWAS*PAQPCV
Trigger: GACACATGGCTGTGCAGGCCAGGAGGCCCACAGATG...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTC +
Preference number: 2 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLHLWAS*PAQPCV
Trigger: GACACATGGCTGTGCAGGCCAGGAGGCCCACAGATG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CCA 90 bp CTGAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGAAGTGTGGGGGTGAGTaGGAGGGTTCCACATCTCAT +
Preference number: 2 (lower is better)
Translates to: LKAPSSRSSRRWVPCTSLKCGGE*EGSTSH
Trigger: ATGAGATGTGGAACCCTCCCACTCACCCCCACACTT...CAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCTCCCTGAGATGCACTaGCCCCCAACCCAGAACCTT +
Preference number: 2 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSLPEMH*PPTQNL
Trigger: AAGGTTCTGGGTTGGGGGTCAGTGCATCTCAGGGAG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGCGAGGTCCGAGAGGTaGCTGAGACAGGGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRARSER*LRQGRG
Trigger: GCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGACTCTGGCTTTGGCCTaGGGTGGCATCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMTLALA*GGIRSR
Trigger: CCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCTCCCACTCTGGCTTTaGCCTGGGGTGGCATCAGGT +
Preference number: 2 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLPLWL*PGVASG
Trigger: ACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACACATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTC +
Preference number: 2 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTHLWAS*PAQPCV
Trigger: GACACATGGCTGTGCAGGCCAGGAGGCCCACAGATG...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGTCCTTGAAGGTCTATaGGGTAAGAGCCCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGVLEGL*GKSPAR
Trigger: TCTGGCTGGGCTCTTACCTCATAGACCTTCAAGGAC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTTCCTTGGTTCTCCCTaGGATGCACTGACCCCCAAC +
Preference number: 2 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSFLGSP*DALTPN
Trigger: GTTGGGGGTCAGTGCATCTCAGGGAGAACCAAGGAA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR TCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCGAGGCATCCTTCCCTaGCTGTCACAGACACACAGA +
Preference number: 2 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLRGILP*LSQTHR
Trigger: TCTGTGTGTCTGTGACAGTCAGGGAAGGATGCCTCG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTACTGTATCTGTGTCCTaGCCCCGCTTTGCCACACTG +
Preference number: 2 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSTVSVS*PRFATL
Trigger: CAGTGTGGCAAAGCGGGGGCAGGACACAGATACAGT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR GCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGAGCAGCAGTAGCACATaGACTCGCCCGGTGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQSSSST*TRPVLP
Trigger: GGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCT...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTGGTTCTCCCTGAGATaGACTGACCCCCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMWFSLR*TDPQPR
Trigger: TCTGGGTTGGGGGTCAGTGCATCTCAGGGAGAACCA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR GCA 90 bp GGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCCGTAACTTTGCTTTCTaGAGGAGCGGAAAACTTCGT +
Preference number: 2 (lower is better)
Translates to: GPVIPKLQALGSLHIADVRNFAF*RSGKLR
Trigger: ACGAAGTTTTCCGCTCCTGCAGAAAGCAAAGTTACG...GACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403148.6
3UTR-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGCTGAGCCTGACCAATaGGTCTCCCACTCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMAEPDQ*VSHSGF
Trigger: AAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp AGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTCTAAGTGTGGGGGTGAGTaGGAGGGTTCCACATCTCAT +
Preference number: 2 (lower is better)
Translates to: SSRRWVPCTSLMSSSAVSKCGGE*EGSTSH
Trigger: ATGAGATGTGGAACCCTCCCACTCACCCCCACACTT...AGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR-3UTR CCA 90 bp TCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCACCATTAGGCCTCACATaGAGAACAGGGCACCCAGTC +
Preference number: 2 (lower is better)
Translates to: SSRSSRRWVPCTSLMSSSPLGLT*RTGHPV
Trigger: GACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGG...TGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR-3UTR GCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGTTTGTCAACAGCCCCTaGTCCTTGGGCCCCTCCATG +
Preference number: 2 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQFVNSP*SLGPSM
Trigger: CATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAA...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAATGTCCCGTGGCATTaGTGGGAACCCCAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMNVPWH*WEPQLK
Trigger: CTTCAACTGGGGTTCCCACCAATGCCACGGGACATT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCATCAGCACAGAGCCTaGGGCCTCTGGCTTTTGGTC +
Preference number: 2 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQHQHRA*GLWLLV
Trigger: GACCAAAAGCCAGAGGCCCCAGGCTCTGTGCTGATG...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CCA 90 bp CGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCGAGCGGAAAACTTCGTaGTTGCCAAAGCATGGCAAT +
Preference number: 2 (lower is better)
Translates to: RSSRRWVPCTSLMSSSAVERKTS*LPKHGN
Trigger: ATTGCCATGCTTTGGCAACCACGAAGTTTTCCGCTC...GACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403148.6
3UTR-3UTR GCA 90 bp CGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCGGAAAACTTCGTGGTTaGCAAAGCATGGCAATGAAC +
Preference number: 2 (lower is better)
Translates to: RSSRRWVPCTSLMSSSAVGKLRG*QSMAMN
Trigger: GTTCATTGCCATGCTTTGGCAACCACGAAGTTTTCC...GACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403148.6
3UTR-3UTR GCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTT +
Preference number: 2 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALVGLLA*TAMCPL
Trigger: AAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCAC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR GCA 72 bp TTGGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCACTaGCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTGC +
Preference number: 3 (lower is better)
Translates to: LGCPGGGGCHPH*PLPAPGPSARC
Trigger: GCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR GCA 72 bp GCTCACCCTCAGCCCGGAGGAGGAGGCGGCCCTCGCTaGGCAGCGCTGACCCATCCTTGTGCCAGGACACTT +
Preference number: 3 (lower is better)
Translates to: AHPQPGGGGGPR*AALTHPCARTL
Trigger: AAGTGTCCTGGCACAAGGATGGGTCAGCGCTGCGCAGCGAGGGCCGCCTCCTCCTCCGGGCTGAGGGTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR GCA 72 bp CGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTGCTTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: RWPVEAEGRAPP*ATRSEGRCLGC
Trigger: GCAGCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452101.1
3UTR CCA 72 bp GCCCGCCTGGCTCAGCGTGGGCCCTGGAATGTCCCGTaGCATTGGTGGGAACCCCAGTTGAAGCCCGAGGCC +
Preference number: 3 (lower is better)
Translates to: ARLAQRGPWNVP*HWWEPQLKPEA
Trigger: GGCCTCGGGCTTCAACTGGGGTTCCCACCAATGCCACGGGACATTCCAGGGCCCACGCTGAGCCAGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR GCA 72 bp CTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTaGTGCCCTGGCCTCCCTGAGCAGCAGGGTGTGCCG +
Preference number: 3 (lower is better)
Translates to: LVGGGGHIAPGI*CPGLPEQQGVP
Trigger: CGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR CCA 72 bp GTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTaGGCCCTGGAATGTCCCGTGGCATTGGTGGGAACC +
Preference number: 3 (lower is better)
Translates to: VVTEAPGPPGSA*ALECPVALVGT
Trigger: GGTTCCCACCAATGCCACGGGACATTCCAGGGCCCACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR CCA 72 bp CTGGCTCAGCGTGGGCCCTGGAATGTCCCGTGGCATTaGTGGGAACCCCAGTTGAAGCCCGAGGCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: LAQRGPWNVPWH*WEPQLKPEAWL
Trigger: CAGCCAGGCCTCGGGCTTCAACTGGGGTTCCCACCAATGCCACGGGACATTCCAGGGCCCACGCTGAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR CCA 72 bp GTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTaGCTCAGCGTGGGCCCTGGAATGTCCCGTGGCATT +
Preference number: 3 (lower is better)
Translates to: VAAGGNRSPRPA*LSVGPGMSRGI
Trigger: AATGCCACGGGACATTCCAGGGCCCACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTGGTGGGAACCCCAGTaGAAGCCCGAGGCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPWWEPQ*KPEAWL
Trigger: CAGCCAGGCCTCGGGCTTCAACTGGGGTTCCCACCA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGCAGCCATGTGTCCACTaGGGGAGGGAGGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: PSPDREGGGPKWALNLPGQPCVH*GREGPQ
Trigger: CTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTG...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CAA 90 bp CTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTAGCGCTGACCCATCCTaGTGCCAGGACACTTGGGGC +
Preference number: 3 (lower is better)
Translates to: LVGGGGHIAPGICCPGLPSADPS*CQDTWG
Trigger: GCCCCAAGTGTCCTGGCACAAGGATGGGTCAGCGCT...AGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR CCA 72 bp GCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTCCACTTGGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: APSQHSVHLWAS*PAQPCVHLGRE
Trigger: CTCCCTCCCCAAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR GCA 72 bp TTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTTGGGGAGGGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: FPALSPSVGLLA*TAMCPLGEGGS
Trigger: GGACCCTCCCTCCCCAAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR GCA 72 bp GCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCCTCAGCCGTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: APSSRSSRRWVP*TSLMSSSAVSE
Trigger: CTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR CCA 72 bp GTGCTGAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTaGGTTCCCTGCACATCGCTGATGTCATCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: VLKAPSSRSSRR*VPCTSLMSSSA
Trigger: GGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR-3UTR CAA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGAATGTCCCGTGGCATaGGTGGGAACCCCAGTTGAA +
Preference number: 3 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWECPVA*VGTPVE
Trigger: TTCAACTGGGGTTCCCACCAATGCCACGGGACATTC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGAGCCCAGCCAGATGTaGCTGCTGGTGGTAACCGAA +
Preference number: 3 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPEPSQM*LLVVTE
Trigger: TTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTCTCCCACTCTGGCTTaGGCCTGGGGTGGCATCAGG +
Preference number: 3 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSSPTLA*AWGGIR
Trigger: CCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp CTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTGCAGTGATGATACACTaGAGCAGCACATCTGCCCCT +
Preference number: 3 (lower is better)
Translates to: LVGGGGHIAPGICCPGLPAVMIH*SSTSAP
Trigger: AGGGGCAGATGTGCTGCTCAAGTGTATCATCACTGC...AGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR GCA 72 bp CCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATaGCATGCCGTAATCTCTCCCACTCTGTCTCACCCC +
Preference number: 3 (lower is better)
Translates to: PLSTAPAPWAPP*HAVISPTLSHP
Trigger: GGGGTGAGACAGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CAA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTTTCTCCATTCCCCTCTaGTCCCTCTGCCTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPFSIPL*SLCLFP
Trigger: TGGGAACAGGCAGAGGGACAAGAGGGGAATGGAGAA...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR TCA 72 bp GGTCCAGGCCCTGGGGTCTCTGTCCTTGAAGGTCTATaGGGTAAGAGCCCAGCCAGATGTTGCTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: GPGPGVSVLEGL*GKSPARCCCWW
Trigger: CCACCAGCAGCAACATCTGGCTGGGCTCTTACCTCATAGACCTTCAAGGACAGAGACCCCAGGGCCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCCATGCCCACCTTCCTaGGTTCTCCCTGAGATGCAC +
Preference number: 3 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMPCPPS*VLPEMH
Trigger: GTGCATCTCAGGGAGAACCAAGGAAGGTGGGCATGG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCAGCCATGTGTCCACTaGGGGAGGGAGGGTCCACAG +
Preference number: 3 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQQPCVH*GREGPQ
Trigger: CTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTG...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTCTCTGTCCTaGAAGGTCTATGAGGTAAGA +
Preference number: 3 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGLGSLS*KVYEVR
Trigger: TCTTACCTCATAGACCTTCAAGGACAGAGACCCCAG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR-3UTR CAA 90 bp GAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATAGGAGCGGAAAATGGTaGCCAAAGCATGGCAATGAA +
Preference number: 3 (lower is better)
Translates to: EGPVIPKLQALGSLHIADRSGKW*PKHGNE
Trigger: TTCATTGCCATGCTTTGGCAACCATTTTCCGCTCCT...ATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420132.5
3UTR TCA 72 bp CCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCTCTGAGTCGTAACTTT +
Preference number: 3 (lower is better)
Translates to: PEAPGAGFPAHR*CHPQPSLSRNF
Trigger: AAAGTTACGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
3UTR GCA 72 bp CAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATaGACTCGCCCGGTGCTCCCCTTCAGGGAGAGACTC +
Preference number: 3 (lower is better)
Translates to: QTDRQACSSSST*TRPVLPFRERL
Trigger: GAGTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR GCA 72 bp CTAACCCTTCCTGGTAAGGCCTTTGTCAACAGCCCCTaGTCCTTGGGCCCCTCCATGCCATGCCGTAATCTC +
Preference number: 3 (lower is better)
Translates to: LTLPGKAFVNSP*SLGPSMPCRNL
Trigger: GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGCCTTACCAGGAAGGGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
3UTR-3UTR CAA 90 bp CCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCGGAAAACTTCGTGGTaGCCAAAGCATGGCAATGAA +
Preference number: 3 (lower is better)
Translates to: PVIPKLQALGSLHIADVIRKTSW*PKHGNE
Trigger: TTCATTGCCATGCTTTGGCAACCACGAAGTTTTCCG...GATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403148.6
3UTR CCA 72 bp ACTGGACAGGAGGACAGAGCGAGTGTGAGTGACTGCTaGCCTCCAGCTCTCCACATTTCTCCTCTGAGGGAT +
Preference number: 3 (lower is better)
Translates to: TGQEDRASVSDC*PPALHISPLRD
Trigger: ATCCCTCAGAGGAGAAATGTGGAGAGCTGGAGGCCAGCAGTCACTCACACTCGCTCTGTCCTCCTGTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR CCA 72 bp ACAGCTGGATGGCTGGGAGGGATGGTCAGGACAACATaGGCAGTAGGGATCGGATGGAAGGGGAAACTTCAT +
Preference number: 3 (lower is better)
Translates to: TAGWLGGMVRTT*AVGIGWKGKLH
Trigger: ATGAAGTTTCCCCTTCCATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
3UTR CCA 72 bp GGCAGTGATGATACACTTGAGCAGCACATCTGCCCCTaGTGCCACCACCACATTCTGCAGGGGGATCTCAAA +
Preference number: 3 (lower is better)
Translates to: GSDDTLEQHICP*CHHHILQGDLK
Trigger: TTTGAGATCCCCCTGCAGAATGTGGTGGTGGCACCAGGGGCAGATGTGCTGCTCAAGTGTATCATCACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409595.2
3UTR GCA 72 bp CATCCTCAGCCGTCTCTGAGTCGTAACTTTGCTTTCTaGAGGAGCGGAAAACTTCGTGGTTGCCAAAGCATG +
Preference number: 3 (lower is better)
Translates to: HPQPSLSRNFAF*RSGKLRGCQSM
Trigger: CATGCTTTGGCAACCACGAAGTTTTCCGCTCCTGCAGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403148.6
3UTR GCA 72 bp CATCCTCAGCCGTCTCTGAGTCGTAACTTTGCTTTCTaGAGGAGCGGAAAATGGTTGCCAAAGCATGGCAAT +
Preference number: 3 (lower is better)
Translates to: HPQPSLSRNFAF*RSGKWLPKHGN
Trigger: ATTGCCATGCTTTGGCAACCATTTTCCGCTCCTGCAGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR GCA 90 bp CCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCTGCTCCAGGACCGTCTaGCCGCTGCCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: PALRDAAWAAREAAGATPCSRTV*PLPHQL
Trigger: GAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCA...GGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp CCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCGGGTGCCACCCCCACTaGCCGCTTCCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PALRDAAWAAREAAGATPGCHPH*PLPAPG
Trigger: TCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCC...GGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp CCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCGTGTGTCCAGGGAGGTaGCCACCAGGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PALRDAAWAAREAAGATPVCPGR*PPGCQN
Trigger: GTTCTGACACCCTGGTGGGCACCTCCCTGGACACAC...GGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp GCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCCCACTGCCCGCTTCCTaGTCCAGGACCGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: APPCATRSEGRCLGCPGGPLPAS*SRTVCP
Trigger: CGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGG...GCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp GGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCTGGGCAGGGCGGCGTaGGGCTTCGCTGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GRAAWGFAGQLRLKVGLLLGRAA*GFAGQL
Trigger: CAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAG...GAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp GGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTTTGGAAGGAGGCGGCTaGGCAGGGCGGCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQGGVGLRWPVEAEGRAPLEGGG*AGRRGA
Trigger: AGCCCCACGCCGCCCTGCCCAGCCGCCTCCTTCCAA...AGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR TCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGGTCCGAGAGGTGCCTaGGACAGGGGCGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHGPRGA*DRGAAR
Trigger: CCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCC +
Preference number: 4 (lower is better)
Translates to: PALRDAAWAAREAAGATPRRWVP*TSLMSS
Trigger: GGATGACATCAGCGATGTGCAGGGAACCCAGCGCCT...GGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp GCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTGCGGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AAWGFAGQLRLKVGLLPAGRAPP*ATRSEG
Trigger: TCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACC...CGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp GGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCGCACAGGCTCCTGAGTaGGACGGTGGGGCGACGTGG +
Preference number: 4 (lower is better)
Translates to: GRAAWGFAGQLRLKVGLLAQAPE*DGGATW
Trigger: CCACGTCGCCCCACCGTCGCACTCAGGAGCCTGTGC...GAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp GCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCGGAGCAGCGCGGATTTaGAAGGAGGCGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: APPCATRSEGRCLGCPGGGAARI*KEAAGQ
Trigger: CTGCCCAGCCGCCTCCTTCCAAATCCGCGCTGCTCC...GCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp GGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCGACCCGAGGGGACGGTaGGGGGAGCAGCGCGGATTT +
Preference number: 4 (lower is better)
Translates to: GRAAWGFAGQLRLKVGLLDPRGR*GEQRGF
Trigger: AAATCCGCGCTGCTCCCCCCACCGTCCCCTCGGGTC...GAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCGCTCCTCCCGCGACGTaGAGCGGCGGATGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPAPPAT*SGGCGP
Trigger: TGGGCCGCATCCGCCGCTCCACGTCGCGGGAGGAGC...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GAGGCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGCTGAGGGACGCTGCTTaGGCTGCCCGGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: EAEGRAPPCATRSEGRCLLRDAA*AAREAA
Trigger: CGCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAG...CAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGAGGCCGGGCTGCGCTaGCGCGTGCGCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPEAGLR*RVRSSS
Trigger: GCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCGCACAGGTGGCCCCCTaGGCTCACTCGCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPAQVAP*AHSPRT
Trigger: GGTCCGAGGCGAGTGAGCTCAGGGGGCCACCTGTGC...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp GCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCCTGCGCAACCCGCTCTaGGGGACGCTGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AEGRAPPCATRSEGRCLGLRNPL*GTLLGL
Trigger: CAGCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAG...GCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp GCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTGCGGGACCGTCTGCCCGCTaGCCCACCAGCTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: AAWGFAGQLRLKVGLLPAGPSAR*PTSSLA
Trigger: AGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCC...CGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCGGCCCCGGTTGCCTGTaGTTGCCTTGGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSGPGCL*LPWAAR
Trigger: CCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCC...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCCAGAGAGCGGGCCTTaGGCAGGGGCACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWPESGP*AGAPRA
Trigger: GGCCCTGGGTGCCCCTGCGCAAGGCCCGCTCTCTGG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGCTGCGCTGACGCGTaGGCTCGTCCAGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGCADA*ARPARP
Trigger: CGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGCGACGCCTAACCTCCTaGTGCGGGCCTTCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQRRLTS*CGPSPG
Trigger: GCCGGGGGAAGGCCCGCAGCAGGAGGTTAGGCGTCG...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGCGAGGTCCGAGAGGTaGCTGAGACAGGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHARSER*LRQGRG
Trigger: GCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCAGCGGAGGCTGGGCTaGGGCGTCCCGCTCACCACC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWQRRLG*GVPLTT
Trigger: GGTGGTGAGCGGGACGCCCCAGCCCAGCCTCCGCTG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCTCCTCCCGCGACGTaGAGCGGCGGATGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAPPAT*SGGCGP
Trigger: TGGGCCGCATCCGCCGCTCCACGTCGCGGGAGGAGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCGGGCTCTCGAGGGGATaGGGCACGCTGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSGLSRG*GTLQRG
Trigger: GCCACGCTGCAGCGTGCCCCATCCCCTCGAGAGCCC...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCACCTTGTGGCGGGTaGCAGCCTCAGCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAPCGG*QPQPGA
Trigger: GGCGCCGGGCTGAGGCTGCCACCCGCCACAAGGTGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAGCCCCAGGCCCGCCTaGCTCAGCGTGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSPRPA*LSVGPG
Trigger: TCCAGGGCCCACGCTGAGCCAGGCGGGCCTGGGGCT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGCAGCACAGGCTCCTaGGTGCGACGGTGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGSTGS*VRRWGD
Trigger: GTCGCCCCACCGTCGCACTCAGGAGCCTGTGCTGCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCGCCGACAGGCGGCCTaGGGCCTCGCTCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPRRQAA*GLAQWR
Trigger: ACGCCACTGAGCGAGGCCTCAGGCCGCCTGTCGGCG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGAGGCCGGGCTGCGCTaGCGCGTGCGCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDEAGLR*RVRSSS
Trigger: GCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp CTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTCTGCCCTGGCCTCCCTaGGCAGCAGGGTGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LVGGGGHIAPGICCPGLPLPWPP*AAGCAA
Trigger: AGCGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAG...AGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR TCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGGGTCTCACGGTCAGTaGGGCGGCACAGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHGSHGQ*GGTGGL
Trigger: CAGGCCACCTGTGCCGCCTCACTGACCGTGAGACCC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGTGGGGCTTGGGCTCTaGAGGCGGCGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGVGLGL*RRRGRA
Trigger: GGCCCTGCCGCGCCGCCTTCAGAGCCCAAGCCCCAC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATGGTCCGAGAGGTGCCTaGGACAGGGGCGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYGPRGA*DRGAAR
Trigger: CCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACC...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGGCCTGCCTTCCTGCTaGCCGCCCGCCTTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPGLPSC*PPAFGL
Trigger: CAGGCCGAAGGCGGGCGGGCAGCAGGAAGGCAGGCC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACTGCTCCAGGACCGTCTaGCCGCTGCCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHCSRTV*PLPHQL
Trigger: GAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCA...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCCCACTGCCCGCTTCCTaGTCCAGGACCGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSPLPAS*SRTVCP
Trigger: CGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGG...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGGGTGCCACCCCCACTaGCCGCTTCCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQGCHPH*PLPAPG
Trigger: TCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHGRAPP*ATRSEG
Trigger: TCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGCACAGGCTCCTGAGTaGGACGGTGGGGCGACGTGG +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHAQAPE*DGGATW
Trigger: CCACGTCGCCCCACCGTCGCACTCAGGAGCCTGTGC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCCGCTGCGCTCCAGGCTaGGCCGTCGCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSRCAPG*AVAPRR
Trigger: TCTTCGAGGAGCGACGGCGCAGCCTGGAGCGCAGCG...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCGCGCAGGGACTCGTaGGAGCGCACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVARRDS*ERTSSS
Trigger: GGAGGAGCTGGTGCGCTCGCACGAGTCCCTGCGCGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGGGAGGCGGCCCTCGCTaGGCAGCGCTGACCCATCCT +
Preference number: 4 (lower is better)
Translates to: WPGPARWWRWPYSSRHLLGGGPR*AALTHP
Trigger: AGGATGGGTCAGCGCTGCGCAGCGAGGGCCGCCTCC...CAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCTGGAGGCAGCTCGTaGCATCCGGGGGTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAGGSS*HPGVPS
Trigger: GCTCGGGACCCCCGGATGGCACGAGCTGCCTCCAGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTGGTGGTGGGGCGCTaGCTCGCTGGAGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLVVGR*LAGGSS
Trigger: CGAGCTGCCTCCAGCGAGGCAGCGCCCCACCACCAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCGCCGCGCTCCGACTTaGGCTGCTCCAGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVRRAPT*AAPESG
Trigger: CCCGCTCTCTGGAGCAGCCCAAGTCGGAGCGCGGCG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCGGCACAGGTGGCCTaGCCCAGCTCGTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAAQVA*PSSLVA
Trigger: CGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCAAAGCGCCGCTGGTCTaGGCGCACGGGCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSKAPLV*AHGLAV
Trigger: AACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTT...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGAAAGCGCCGCTGGTCTaGGCGCACGGGCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQKAPLV*AHGLAV
Trigger: AACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTT...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCAGCAGCTCGGGGATaGGGCGCAGCACCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAAARG*GAAPGG
Trigger: GCCACCTGGTGCTGCGCCCCATCCCCGAGCTGCTGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGGGCGCTGCCTCGCTaGAGGCAGCTCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGALPR*RQLVPS
Trigger: GGATGGCACGAGCTGCCTCCAGCGAGGCAGCGCCCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCGTGCAGGGCTGGATaGCTGGGCCTCGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPCRAG*LGLAEG
Trigger: GCCCTCAGCGAGGCCCAGCCATCCAGCCCTGCACGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCCTGCGAGGGGCCCTaGGCGTGGCCTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPCEGP*AWPDSW
Trigger: CCAGCTGTCAGGCCACGCCCAGGGCCCCTCGCAGGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGTGGTGGCGCCGGCCTaGGCGGCCAACTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWVVAPA*AANWLC
Trigger: GCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCAC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAGCCCGACGTGGCGCTaGCCTCGGAGCCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSPTWR*PRSPGT
Trigger: AGTCCCTGGGCTCCGAGGCCAGCGCCACGTCGGGCT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAGCGTGCCCGTGCGGTaGCCAAGGGGCCTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSVPVR*PRGLRA
Trigger: GGCCCTTAGGCCCCTTGGCCACCGCACGGGCACGCT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCGCAGCTCGAGGTCTaGGGCCGGGCTGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGAQLEV*GRAALT
Trigger: CGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCTGCCCTGGCCTCCCTaGGCAGCAGGGTGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYLPWPP*AAGCAA
Trigger: AGCGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAG...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCTCCCGCAGGCCTGTaGCCAGTGCCGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAPAGL*PVPSTG
Trigger: ACCAGTGGACGGCACTGGTCACAGGCCTGCGGGAGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGACAGCCGCTCCAGGGTaGAGCTCAGCCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVTAAPG*SSAACA
Trigger: TGCGCAGGCGGCTGAGCTTCACCCTGGAGCGGCTGT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCTTTCCCCTGGGGCTaGGGAGCCCGACGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPAFPWG*GARRGA
Trigger: AGCGCCACGTCGGGCTCCTCAGCCCCAGGGGAAAGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGCCCTGGCTGGCCTTaGGGTGACAGGGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGPGWP*GDRGLL
Trigger: CAAGAGGCCCCTGTCACCTCAAGGCCAGCCAGGGCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCCACTGCCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTGCCCCACCAGCTCACAAAACTTCGCATGGGTaGGTCGGCCAAAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PTARFLLQDRLPAAPPAHKTSHG*VGQRPG
Trigger: GCCGGGCCTTTGGCCGACTCACCCATGCGAAGTTTT...GTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp GCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCCTTGCTCCTCTGAGGTaGCTGTCACGGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: AEGRAPPCATRSEGRCLGLAPLR*LSRRSG
Trigger: CCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAG...GCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp GCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTGCGCCCCACCAGCTCACTTaGTCCTCTGAGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: AAWGFAGQLRLKVGLLPAPHQLT*SSEVPV
Trigger: GACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGG...CGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGGACCGTCTGCCCGCTaGCCCACCAGCTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHGPSAR*PTSSLA
Trigger: AGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGGTGCCACCCCCACTaGCCGCTTCCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGCHPH*PLPAPG
Trigger: TCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGTGCTTGCCTTGGGCTaGCCGGGAGGCGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPVLALG*PGGGGC
Trigger: GCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCAC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGGCCCCGGTTGCCTGTaGTTGCCTTGGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPGPGCL*LPWAAR
Trigger: CCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCAGCTTGTCCAGGATaGGGGAGCCGGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAACPG*GSRRAP
Trigger: TGGTGCGCGCCGGCTCCCGCATCCTGGACAAGCTGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGGCAGCTTGTCCAGGATaGGGGAGCCGGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGAACPG*GSRRAP
Trigger: TGGTGCGCGCCGGCTCCCGCATCCTGGACAAGCTGC...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACCCAGAGAGCGGGCCTTaGGCAGGGGCACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDPESGP*AGAPRA
Trigger: GGCCCTGGGTGCCCCTGCGCAAGGCCCGCTCTCTGG...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCCCGCAGTTCTTCCTaGGAGGCCCCGGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGARSSS*EAPGVP
Trigger: GGGCACCCCCGGGGCCTCGCAGGAAGAACTGCGGGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGCCCGCAGTTCTTCCTaGGAGGCCCCGGGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRARSSS*EAPGVP
Trigger: GGGCACCCCCGGGGCCTCGCAGGAAGAACTGCGGGC...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGGGATGGGGCACGCTaGAGCGTGGCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGDGAR*SVARRD
Trigger: GTCCCTGCGCGCCACGCTGCAGCGTGCCCCATCCCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCCGGCTTCTCCGCGCTaGTCGGAGAGGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGPASPR*SERAAG
Trigger: CCCAGCCGCCCTCTCCGAGCAGCGCGGAGAAGCCGG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCGCGGCACAGGGCTCCTaGACTCCTGGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSAAQGS*TPGWLC
Trigger: GCAGAGCCATCCAGGAGTGCAGGAGCCCTGTGCCGC...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCTGAGCAGCAGGGTGTaGCGCTCACCCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVLSSRV*RSPSAR
Trigger: CCGGGCTGAGGGTGAGCGGCACACCCTGCTGCTCAG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGCTGAGCAGCAGGGTGTaGCGCTCACCCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGLSSRV*RSPSAR
Trigger: CCGGGCTGAGGGTGAGCGGCACACCCTGCTGCTCAG...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp GTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTGAGCTGAGCAGCAGGGTGTaGCGCTCACCCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VGGGGHIAPGICCPGLPELSSRV*RSPSAR
Trigger: CCGGGCTGAGGGTGAGCGGCACACCCTGCTGCTCAG...CTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCTCCCGGCATCTGCTaGCCTGGCCTCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAPGIC*PGLPEQ
Trigger: CTGCTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGGCTCCCGGCATCTGCTaGCCTGGCCTCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGAPGIC*PGLPEQ
Trigger: CTGCTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGC...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp TGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGGCTCCCGGCATCTGCTaGCCTGGCCTCCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: WPGPARWWRWPYSSRHLLAPGIC*PGLPEQ
Trigger: CTGCTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGC...CAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGCTCCGGCGCTaGGGCAGCTCCACAGACGCC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGLGLRR*GSSTDA
Trigger: GGCGTCTGTGGAGCTGCCGCAGCGCCGGAGCCCCAG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCGCTGGCGCAGGGCCTaGAGCCTCTGGGCATACTCG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWRWRRA*SLWAYS
Trigger: CGAGTATGCCCAGAGGCTGCAGGCCCTGCGCCAGCG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCAGAGCAGGGTGGCTaGCTCCCCCTCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAEQGG*LPLQQH
Trigger: GTGCTGCTGGAGGGGGAGGCAGCCACCCTGCTCTGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCTGGCCGGGCAGCCTaGAGGCCCCTGTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAGRAA*RPLCLR
Trigger: ACGAAGACACAGGGGCCTGCAGGCTGCCCGGCCAGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCCCGGCGCCGCCGCTaGTCGCCCAGGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGARRRR*SPRNSL
Trigger: CAAGGAGTTCCTGGGCGAGCAGCGGCGGCGCCGGGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTGCCTGTGCTTGCCTTaGGCTGCCCGGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPCLCLP*AAREAA
Trigger: CGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCGGCGTGGGGCTTCGCTaGCCAGTTGAGGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: AEGRAPPCATRSEGRCLGGVGLR*PVEAEG
Trigger: ACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCC...GCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGGAGCAGCGCGGATTTaGAAGGAGGCGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQGAARI*KEAAGQ
Trigger: CTGCCCAGCCGCCTCCTTCCAAATCCGCGCTGCTCC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGGGCACGCTGCAGCGTaGCGCGCAGGGACTCGTGCG +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDGHAAA*RAGTRA
Trigger: CGCACGAGTCCCTGCGCGCCACGCTGCAGCGTGCCC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGGGCTCCTGCACTCCTaGATGGCTCTGCTCCGGGTC +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQGLLHS*MALLRV
Trigger: GACCCGGAGCAGAGCCATCCAGGAGTGCAGGAGCCC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACTGGGACTGGGCTTCATaGTGGGGGTTCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHWDWAS*WGFAAR
Trigger: CCTGGCCGCGAACCCCCACCATGAAGCCCAGTCCCA...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCAGGAGACCACAGGCTTaGGCTCCCCCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPRRPQA*APPARG
Trigger: TCCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCT...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACTCTGGGCGCACGGGCTaGCGGTTTCTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHSGRTG*RFLSQE
Trigger: CTCCTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGA...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATTCCGCAAAGCGCCGCTaGTCTGGGCGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYSAKRR*SGRTGW
Trigger: CCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGA...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCAGGGCTGGATGGCTaGGCCTCGCTGAGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAGLDG*ASLRAD
Trigger: GTCTGCCCTCAGCGAGGCCCAGCCATCCAGCCCTGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCAGCAGCGTGGGGCTTaGGCTCTGAAGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPQQRGA*ALKAAR
Trigger: CCGCGCCGCCTTCAGAGCCCAAGCCCCACGCTGCTG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCGGAGGGGGCCCCAAATaGGCCCTAAACCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSGGGPK*ALNLPG
Trigger: CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCC...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp CCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTGCCCCACCAGCTCACTTGCTCCGCTCACTTGCTCCTCTaGGGTGCCTGTCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: PASCSRTVCPLPHQLTCSAHLLL*GACHGG
Trigger: ACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGC...GGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR TCA 90 bp CACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTCGCTGCGCAGCGCTaGCCCATCCTTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HRWPGPARWWRWPYSSRHLAAQR*PILVPG
Trigger: TCCTGGCACAAGGATGGGTCAGCGCTGCGCAGCGAG...ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR TCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCTGCCCTGGCCTCCCTaGGCAGCAGGGTGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPLPWPP*AAGCAA
Trigger: AGCGGCACACCCTGCTGCTCAGGGAGGCCAGGGCAG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCTTCGAGCTGGGGCCTaGGGCGGCTGTCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSLRAGA*GGCPGL
Trigger: GAGCCCCGGACAGCCGCCTCAGGCCCCAGCTCGAAG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCAGGTCTGTGTGCCGTaGCGGTTTCGGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVQVCVP*RFRAVQ
Trigger: CTGCACCGCCCGAAACCGTCACGGCACACAGACCTG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCAGTGGGCGGGGCACTaGGGGCAGCTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPQWAGH*GQLFQL
Trigger: GAGCTGGAAGAGCTGCCCTCAGTGCCCCGCCCACTG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGGTCCGAGAGGTGCCTaGGACAGGGGCGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSGPRGA*DRGAAR
Trigger: CCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACTCTCTGAGTCATGGGTaGGTCGGCCAAAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHSLSHG*VGQRPG
Trigger: GCCGGGCCTTTGGCCGACTCACCCATGACTCAGAGA...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGGCGCGGGCAGGAGCTaGCCATCCCGGAACCAGCGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSGAGRS*PSRNQR
Trigger: CCGCTGGTTCCGGGATGGGCAGCTCCTGCCCGCGCC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGCTTGCTCCTCTGAGGTaGCTGTCACGGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQLAPLR*LSRRSG
Trigger: CCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAG...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGGACCGTCTGCCCGCTaGCCCACCAGCTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWGPSAR*PTSSLA
Trigger: AGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTGCTCCAGGACCGTCTaGCCGCTGCCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPCSRTV*PLPHQL
Trigger: GAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGTGCTTGCCTTGGGCTaGCCGGGAGGCGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSVLALG*PGGGGC
Trigger: GCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCAC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTGGCCCGGCCCCGGTTaGCTGTGCTTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPWPGPG*LCLPWA
Trigger: AGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATTGGCCCGGCCCCGGTTaGCTGTGCTTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYWPGPG*LCLPWA
Trigger: AGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCA...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCGCTCCGACTTGGGCTaGTCCAGAGAGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWRSDLG*SRERAL
Trigger: CAAGGCCCGCTCTCTGGAGCAGCCCAAGTCGGAGCG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGTCTGAGGCCGGGCTaGGCTGACGCGTGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGLRPG*ADACAR
Trigger: ACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGGTCTGAGGCCGGGCTaGGCTGACGCGTGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRGLRPG*ADACAR
Trigger: ACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACC...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCACGTGGAGCGGCGGATaGGGCCCAGCTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGTWSGG*GPAPGR
Trigger: TCGCCCAGGAGCTGGGCCGCATCCGCCGCTCCACGT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCATAGCTCCCGGCATCTaGTGCCCTGGCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPIAPGI*CPGLPE
Trigger: CTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTAT...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGTGCGCCGGTCGTCGCTaGTCTGGATGCGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWCAGRR*SGCGGH
Trigger: ATGGCCACCGCATCCAGAGCAGCGACGACCGGCGCA...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGTCCAGGGTTGGGCCGTaGTCCAGCAGCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSRVGP*SSSCTG
Trigger: GCCTGTGCAGCTGCTGGAGCACGGCCCAACCCTGGA...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGAGGGAGCCCTTCCCTaGTCCTGCCAGTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVEGALP*SCQSMG
Trigger: CCCCATGGACTGGCAGGAGCAGGGAAGGGCTCCCTC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGCGAGGTCCGAGAGGTaGCTGAGACAGGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDARSER*LRQGRG
Trigger: GCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCCATGCACTCGCCCGGTaGTCCCCTTCAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPHALAR*SPSGRD
Trigger: GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATG...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGCAGCAGTAGCACATaGACTCGCCCGGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHSSSST*TRPVLP
Trigger: GGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCT...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGTGGCCCCCTGCCCCTaGTCCTGCACCAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHVAPCP*SCTKLG
Trigger: ACCAAGTTTGGTGCAGGAGCAGGGGCAGGGGGCCAC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCTGGGCAGGGCGGCGTaGGGCTTCGCTGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPLGRAA*GFAGQL
Trigger: CAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTTGGAAGGAGGCGGCTaGGCAGGGCGGCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGLEGGG*AGRRGA
Trigger: AGCCCCACGCCGCCCTGCCCAGCCGCCTCCTTCCAA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGACCCGAGGGGACGGTaGGGGGAGCAGCGCGGATTT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPDPRGR*GEQRGF
Trigger: AAATCCGCGCTGCTCCCCCCACCGTCCCCTCGGGTC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGGGCACGCTGCAGCGTaGCGCGCAGGGACTCGTGCG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSGHAAA*RAGTRA
Trigger: CGCACGAGTCCCTGCGCGCCACGCTGCAGCGTGCCC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGGGCTCTCGAGGGGATaGGGCACGCTGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGGLSRG*GTLQRG
Trigger: GCCACGCTGCAGCGTGCCCCATCCCCTCGAGAGCCC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGCGGGTCAGCGGGAATTaGTCCCGACGCCTAACCTCC +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQRVSGN*SRRLTS
Trigger: GGAGGTTAGGCGTCGGGACCAATTCCCGCTGACCCG...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATGGGGTGCTTTCGTCCTaGCCTCTGGGGGATCGGCGG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYGVLSS*PLGDRR
Trigger: CCGCCGATCCCCCAGAGGCCAGGACGAAAGCACCCC...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCCTCCAGGCCCGGCGTaGCCCAGGGCAGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSPPGPA*PRAGSA
Trigger: TGCGCTTCCTGCCCTGGGCCACGCCGGGCCTGGAGG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCCTCCAGGCCCGGCGTaGCCCAGGGCAGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLPPGPA*PRAGSA
Trigger: TGCGCTTCCTGCCCTGGGCCACGCCGGGCCTGGAGG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CTGGCCTCCCTGAGCAGCAGGGTGTGCCGCTCACCCTCAGCCCGGAGGAGGAGGCAGCACATCTGCCCCTaGTGCCACCACCACATTCTG +
Preference number: 4 (lower is better)
Translates to: LASLSSRVCRSPSARRRRQHICP*CHHHIL
Trigger: CAGAATGTGGTGGTGGCACCAGGGGCAGATGTGCTG...CCTCCTCCTCCGGGCTGAGGGTGAGCGGCACACCCTGCTGCTCAGGGAGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGTGAGGCGGCACAGGTaGCCTGGCCCAGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPVRRHR*PGPARW
Trigger: CCAACGAGCTGGGCCAGGCCACCTGTGCCGCCTCAC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGACTGGGCTTCATGGTaGGGGTTCGCGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQDWASW*GFAARS
Trigger: AGACCTGGCCGCGAACCCCCACCATGAAGCCCAGTC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGTCTGGGCGCACGGGCTaGCGGTTTCTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGSGRTG*RFLSQE
Trigger: CTCCTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGA...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAAAGCGCCGCTGGTCTaGGCGCACGGGCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPKAPLV*AHGLAV
Trigger: AACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCACCTCCACGTCAGTaGGCCCCGCCACCAGGCACT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPPPRQ*APPPGT
Trigger: AGTGCCTGGTGGCGGGGCCCACTGACGTGGAGGTGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCTGCGGGGCGCCATCTaGAGGGCCTGGGACCACATC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPLRGAI*RAWDHI
Trigger: GATGTGGTCCCAGGCCCTCCAGATGGCGCCCCGCAG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCTCGAGTGGGGGCTGGTaGTGGGGCGCTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSSGGW*WGAASL
Trigger: CAGCGAGGCAGCGCCCCACCACCAGCCCCCACTCGA...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGAGGGGCCCTGGGCGTaGCCTGACAGCTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPEGPWA*PDSWRD
Trigger: GTCCCTCCAGCTGTCAGGCCACGCCCAGGGCCCCTC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGACTGCTGCCTGGCCTaGGGGGCACCGTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPDCCLA*GAPWEL
Trigger: GAGTTCCCACGGTGCCCCCCAGGCCAGGCAGCAGTC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTCTCTCCCACAGCTTCTTCATaGCGGGGGAGGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SPCRGVLVSRPPFCWVLSPTASS*RGRGPG
Trigger: GCCCGGCCCCCTCCCCCGCCATGAAGAAGCTGTGGG...AGAGAGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403148.6
3UTR CAA 72 bp CCTGGCTCAGCGTGGGCCCTGGAATGTCCCGTGGCATaGGTGGGAACCCCAGTTGAAGCCCGAGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PGSAWALECPVA*VGTPVEARGLA
Trigger: AGCCAGGCCTCGGGCTTCAACTGGGGTTCCCACCAATGCCACGGGACATTCCAGGGCCCACGCTGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp TGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGGGAAAGGCTATCCTCTaGCCCCCAGCTTGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: WPGPARWWRWPYSSRHLLGKAIL*PPACAH
Trigger: GTGGGCGCAAGCTGGGGGTCAGAGGATAGCCTTTCC...CAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR TCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTGCGCAACCCGCTCTaGGGGACGCTGACGTGGATA +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLRNPL*GTLTWI
Trigger: TATCCACGTCAGCGTCCCTCAGAGCGGGTTGCGCAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCTCGCTGCGCAGCGCTaGCCCATCCTTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPLAAQR*PILVPG
Trigger: TCCTGGCACAAGGATGGGTCAGCGCTGCGCAGCGAG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCTTCCAGCAGCCGTGTaGACAGGGGTGCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVLPAAV*TGVPTR
Trigger: CCTCGTTGGCACCCCTGTTCACACGGCTGCTGGAAG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGGGGCGGGGTGCCACTaGTCTTGCAGTCGAAACGGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPGAGCH*SCSRNG
Trigger: CCCGTTTCGACTGCAAGATCAGTGGCACCCCGCCCC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGGCCTCCCGACGCGCTaGTGCCTTTGGCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGGLPTR*CLWLGL
Trigger: CAGGCCAAGCCAAAGGCATCAGCGCGTCGGGAGGCC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCAGTGGGAATGTCTGTaGGGGACACCCGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWQWECL*GTPGSQ
Trigger: CTGGCTCCCGGGTGTCCCTCACAGACATTCCCACTG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGGAGCCTCCTGGTCCTaGGAGGGAGCCCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGGASWS*EGALPC
Trigger: GCAGGGAAGGGCTCCCTCTCAGGACCAGGAGGCTCC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCTCTCCGACAGCCCTaGGGTCCTGCACCGAGCGTG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGALRQP*GPAPSV
Trigger: CACGCTCGGTGCAGGACCTCAGGGCTGTCGGAGAGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCTGCGCACGTACTGGTaGCCCAACTCCTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVLRTYW*PNSSWT
Trigger: CGTCCAGGAGGAGTTGGGTCACCAGTACGTGCGCAG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGCACAGGTGGCCCCCTaGGCTCACTCGCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSAQVAP*AHSPRT
Trigger: GGTCCGAGGCGAGTGAGCTCAGGGGGCCACCTGTGC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCTTGCTCCTCTGAGGTaGCTGTCACGGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVLAPLR*LSRRSG
Trigger: CCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCCGGTTGCCTGTGCTTaGCTTGGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPPVACA*LGLPGR
Trigger: CCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGRAPP*ATRSEG
Trigger: TCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGCCGCTCGGCCACGCTaGCTGGCGCCCGCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSAARPR*LAPAVL
Trigger: AAGAACTGCGGGCGCCAGGCAGCGTGGCCGAGCGGC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCAGCGAGGCCGCTTTCTaGTGGAACAGGCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSEAAF*WNRRRR
Trigger: GCGGCGCCGCCTGTTCCAGCAGAAAGCGGCCTCGCT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGAGCGAGGCCGCTTTCTaGTGGAACAGGCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRSEAAF*WNRRRR
Trigger: GCGGCGCCGCCTGTTCCAGCAGAAAGCGGCCTCGCT...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCGCCTAACCTCCTGCTaGGGGCCTTCCCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPRLTSC*GPSPGS
Trigger: AGAGCCGGGGGAAGGCCCGCAGCAGGAGGTTAGGCG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACCGCCTAACCTCCTGCTaGGGGCCTTCCCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDRLTSC*GPSPGS
Trigger: AGAGCCGGGGGAAGGCCCGCAGCAGGAGGTTAGGCG...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCGACGCCTAACCTCCTaGTGCGGGCCTTCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRRLTS*CGPSPG
Trigger: GCCGGGGGAAGGCCCGCAGCAGGAGGTTAGGCGTCG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCGGCACAGGGCTCCTaGACTCCTGGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPAAQGS*TPGWLC
Trigger: GCAGAGCCATCCAGGAGTGCAGGAGCCCTGTGCCGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCTCCTCCGGCCCTCTaGGAAGCCTCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPPPAL*EASSLP
Trigger: AGGCAGAGAAGAGGCTTCGCAGAGGGCCGGAGGAGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGCTGACCCATCCTTGTaGCAGGACACTTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LAQLVGGGGHIAPGICCPADPSL*QDTWGG
Trigger: CCCGCCCCAAGTGTCCTGGCACAAGGATGGGTCAGC...AGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGGAGGCGGCCCTCGCTaGGCAGCGCTGACCCATCCT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSGGGPR*AALTHP
Trigger: AGGATGGGTCAGCGCTGCGCAGCGAGGGCCGCCTCC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATATAGCTCCCGGCATCTaGTGCCCTGGCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HRWPGPARWWRWPYSSRHIAPGI*CPGLPE
Trigger: CTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTAT...ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATAGCATCGCCACGCTCTaGAGCCAGGATCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYSIATL*SQDPQP
Trigger: CGGCTGCGGATCCTGGCTGCAGAGCGTGGCGATGCT...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCAATGTGCAGTGAGTaGAGACCCCCGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAMCSE*RPPSCR
Trigger: GCGGCAGGACGGGGGTCTGCACTCACTGCACATTGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCCCTTCCCTGCTCCTaGCAGTCCATGGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPALPCS*QSMGVA
Trigger: TGCCACCCCCATGGACTGGCAGGAGCAGGGAAGGGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGACAGCCCTGAGGTCCTaGACCGAGCGTGAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWTALRS*TERERS
Trigger: TGAGCGCTCACGCTCGGTGCAGGACCTCAGGGCTGT...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCCCCGAGTCCTCGCTaGTGCCACTGCGCTGCAATC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPPSPR*CHCAAI
Trigger: GATTGCAGCGCAGTGGCAGCAGCGAGGACTCGGGGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCCTCGGACGTGGCCCTaGGAAGCCGTCCGAACAGCG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPPRTWP*EAVRTA
Trigger: CGCTGTTCGGACGGCTTCGCAGGGCCACGTCCGAGG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGCGGCCAACTGGTTGTaGGGAAGGCCAAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPAANWL*GRPRRR
Trigger: GCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCAGGAGATGTGCGGTaGAGGGCAGGCCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPGDVR*RAGRWQ
Trigger: CTGCCAGCGGCCTGCCCTGCACCGCACATCTCCTGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCAGGACCCGCCGCTTaGCCTCGGCAGCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGAGPAA*PRQHRA
Trigger: TGCCCTATGCTGCCGAGGGCAAGCGGCGGGTCCTGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGTCCTGCCCCCGCTTTaGCACACTGACTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWVLPPL*HTDSQP
Trigger: AGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGAC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCTCTGCCGCCTCGCTaGCTTCTCTCATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPLPPR*LLSCPS
Trigger: GCTGGGACATGAGAGAAGGCAGCGAGGCGGCAGAGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCTGCTGCCTGCCCACTaGCCACCCCAGCGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLLLPAH*PPQRGS
Trigger: GGAGCCACGCTGGGGTGGGCAGTGGGCAGGCAGCAG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396688.5
CDS-3UTR GCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPVGLLA*TAMCPL
Trigger: AAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCAC...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSVGLLA*TAMCPL
Trigger: AAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCAC...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQVGLLA*TAMCPL
Trigger: AAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCAC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACCCTTGGGCCCCTCCATaGCATGCCGTAATCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHPWAPP*HAVISP
Trigger: GGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGG...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGCCTTGGGCCCCTCCATaGCATGCCGTAATCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQPWAPP*HAVISP
Trigger: GGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGG...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGCGTGGGGCTTCGCTaGCCAGTTGAGGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGVGLR*PVEAEG
Trigger: ACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTTTGGAAGGAGGCGGCTaGGCAGGGCGGCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSLEGGG*AGRRGA
Trigger: AGCCCCACGCCGCCCTGCCCAGCCGCCTCCTTCCAA...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCCTCGCTTCTCTTCGGTaGTGGTGTCCTCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPLASLR*WCPRAA
Trigger: TGCTGCCCGAGGACACCACCACCGAAGAGAAGCGAG...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCGCCGCGCTCCGACTTaGGCTGCTCCAGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLRRAPT*AAPESG
Trigger: CCCGCTCTCTGGAGCAGCCCAAGTCGGAGCGCGGCG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGAGGCCGCTTTCTGCTaGAACAGGCGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPEAAFC*NRRRRS
Trigger: CGAGCGGCGCCGCCTGTTCCAGCAGAAAGCGGCCTC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTATGCGGCCCAGCTCCTaGGCGAAGCGCAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPMRPSS*AKRSSR
Trigger: CCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCAT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCGGCCCGCGATGTCTTaGGGGTGGAGGGCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGRPAMS*GWRAER
Trigger: TCTCTCGGCCCTCCACCCCCAAGACATCGCGGGCCG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGGGCTCCTGCACTCCTaGATGGCTCTGCTCCGGGTC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPGLLHS*MALLRV
Trigger: GACCCGGAGCAGAGCCATCCAGGAGTGCAGGAGCCC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCGAGCTCAGGGGAGGTaGGCCGGGCCCGGCGACCTT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRAQGR*AGPGDL
Trigger: AAGGTCGCCGGGCCCGGCCCACCTCCCCTGAGCTCG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATGGCCCAGCTCGTTGGTaGCGGTGGCCATATAGCTCC +
Preference number: 4 (lower is better)
Translates to: HRWPGPARWWRWPYSSRHGPARW*RWPYSS
Trigger: GGAGCTATATGGCCACCGCCACCAACGAGCTGGGCC...ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR CCA 90 bp TGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCTGGCCCAGCTCGTTaGTGGCGGTGGCCATATAGC +
Preference number: 4 (lower is better)
Translates to: WPGPARWWRWPYSSRHLLPGPAR*WRWPYS
Trigger: GCTATATGGCCACCGCCACCAACGAGCTGGGCCAGG...CAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGTGAGGCGGCACAGGTaGCCTGGCCCAGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRVRRHR*PGPARW
Trigger: CCAACGAGCTGGGCCAGGCCACCTGTGCCGCCTCAC...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGGACTGGGCTTCATGGTaGGGGTTCGCGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGDWASW*GFAARS
Trigger: AGACCTGGCCGCGAACCCCCACCATGAAGCCCAGTC...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATTGGGACTGGGCTTCATaGTGGGGGTTCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYWDWAS*WGFAAR
Trigger: CCTGGCCGCGAACCCCCACCATGAAGCCCAGTCCCA...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGAACGGCGGTTCTGGCTaGGACTGGGCTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQNGGSG*DWASWW
Trigger: CCACCATGAAGCCCAGTCCCAGCCAGAACCGCCGTT...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCAACGGCGGTTCTGGCTaGGACTGGGCTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPNGGSG*DWASWW
Trigger: CCACCATGAAGCCCAGTCCCAGCCAGAACCGCCGTT...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTCCGCAAAGCGCCGCTaGTCTGGGCGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSSAKRR*SGRTGW
Trigger: CCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTTCCGCAAAGCGCCGCTaGTCTGGGCGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSSAKRR*SGRTGW
Trigger: CCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGA...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGGCAGGCCGGTCACCTaGCACTCTAGCATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPGRPVT*HSSMAS
Trigger: GGAGGCCATGCTAGAGTGCCAGGTGACCGGCCTGCC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCGGTCGTCGCTGCTCTaGATGCGGTGGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVRSSLL*MRWPLW
Trigger: CCACAATGGCCACCGCATCCAGAGCAGCGACGACCG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTGGTTTGTCCAGCATaGCAGGGGCCTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLVCPA*QGPPPG
Trigger: CCCTGGAGGAGGCCCCTGCCATGCTGGACAAACCAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTAGTCGTGCTGGAGCCTaGCCAGCAGCCGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSSRAGA*PAAGPP
Trigger: GGGAGGCCCGGCTGCTGGCCAGGCTCCAGCACGACT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCCAGTCCATGGGGGTaGCAGCCCCAGTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGASPWG*QPQSLG
Trigger: CCCCAGAGACTGGGGCTGCCACCCCCATGGACTGGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTTCTCGAGTGGGGGCTaGTGGTGGGGCGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGFSSGG*WWGAAS
Trigger: CGAGGCAGCGCCCCACCACCAGCCCCCACTCGAGAA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTTGGGTTTGGGGGCGCTaGGCCGTGCAGGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPWVWGR*AVQGWM
Trigger: CATCCAGCCCTGCACGGCCCAGCGCCCCCAAACCCA...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCTTGGAGGCTCGGACTaGTTCTGGCCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVLGGSD*FWPGLW
Trigger: CCAGAGCCCAGGCCAGAACCAGTCCGAGCCTCCAAG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGGGGTGGTGCAGGCTTaGAGGCTCGGACTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWGVVQA*RLGLVL
Trigger: CAGAACCAGTCCGAGCCTCCAAGCCTGCACCACCCC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGGTCCCCGCCGGGCTaGGCCGGTATATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGSPPG*AGICHP
Trigger: AGGATGGCATATACCGGCCCAGCCCGGCGGGGACCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCCTGGGCGGCCAACTaGTTGTGCGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPAWAAN*LCGRPR
Trigger: CCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGTCCTGCAACCATGGGTaGGCCAGGCAGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSCNHG*ARQSCR
Trigger: CCTGCAGGACTGCCTGGCCCACCCATGGTTGCAGGA...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCCCGAGGCCTGGCTGTaGTCCGTGCCTCTAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSPEAWL*SVPLGA
Trigger: GGCCCCTAGAGGCACGGACCACAGCCAGGCCTCGGG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCTCAGCGTGGGCCCTaGAATGTCCCGTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAQRGP*NVPWHW
Trigger: CCAATGCCACGGGACATTCCAGGGCCCACGCTGAGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCCGCCTGGCTCAGCGTaGGCCCTGGAATGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGPPGSA*ALECPV
Trigger: CACGGGACATTCCAGGGCCCACGCTGAGCCAGGCGG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GTTGAGGCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCAAGGCCCGGCGGGAATaGCCGGTTTTCTGGAAACGC +
Preference number: 4 (lower is better)
Translates to: VEAEGRAPPCATRSEGRCKARRE*PVFWKR
Trigger: GCGTTTCCAGAAAACCGGCCATTCCCGCCGGGCCTT...GCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp CCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCCCACCAGGGTGTCAGAAGGGGGCCTGGTCGGGTaGGTGGTAGATAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PVTEVGGVSREVPTRVSEGGLVG*VVDKCG
Trigger: CCCACACTTATCTACCACCCACCCGACCAGGCCCCC...TTCTGACACCCTGGTGGGCACCTCCCTGGACACACCCCCGACCTCCGTGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR CCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCCATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTC +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSHLWAS*PAQPCV
Trigger: GACACATGGCTGTGCAGGCCAGGAGGCCCACAGATG...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCCATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTC +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPHLWAS*PAQPCV
Trigger: GACACATGGCTGTGCAGGCCAGGAGGCCCACAGATG...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCGCCGTCTCTGAGTCATaGGTGAGTCGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPAVSES*VSRPKA
Trigger: GGCCTTTGGCCGACTCACCCATGACTCAGAGACGGC...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp CCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCCCACCAGGGTGTCAGAAGCTCACTTGCTCCTCTaGGGTGCCTGTCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: PVTEVGGVSREVPTRVSEAHLLL*GACHGG
Trigger: ACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGC...TTCTGACACCCTGGTGGGCACCTCCCTGGACACACCCCCGACCTCCGTGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR TCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACCTCGCTGCGCAGCGCTaGCCCATCCTTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDLAAQR*PILVPG
Trigger: TCCTGGCACAAGGATGGGTCAGCGCTGCGCAGCGAG...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGTCCTGCACCGAGCGTaGGCGCTCAGGCCGTCGCAC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMVLHRA*ALRPSH
Trigger: GTGCGACGGCCTGAGCGCTCACGCTCGGTGCAGGAC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTGCTCCCAGGGGAGCTaGCCACCTCCTTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMCSQGS*PPPWPG
Trigger: GCCCGGCCAAGGAGGTGGTCAGCTCCCCTGGGAGCA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGACCGGAACCTGTCACTaGGCCCACAGAGGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVTGTCH*AHRGVP
Trigger: GGGAACTCCTCTGTGGGCTCAGTGACAGGTTCCGGT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCCATCTCCGGAGCCATaGACTCCAGCGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGPSPEP*TPACPC
Trigger: GCACGGGCACGCTGGAGTTCATGGCTCCGGAGATGG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCCGCTTTGCCACACTaGCTCCCAGCCTACTGCCCT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPALPH*LPAYCP
Trigger: AGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTCCTCTGAGGGATGCTaGCAGCTGACCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPSSEGC*QLTHPT
Trigger: GGTGGGGTGGGTCAGCTGTCAGCATCCCTCAGAGGA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp TCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTCTGAGTCCACGCACCATGGGTaGGTCGGCCAAAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRRWVPCTSLMSSSAVSESTHHG*VGQRPG
Trigger: GCCGGGCCTTTGGCCGACTCACCCATGGTGCGTGGA...CTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCCCACCAGCTCACTTaGTCCTCTGAGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPHQLT*SSEVPV
Trigger: GACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGCCCCACCAGCTCACTTaGTCCTCTGAGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGPHQLT*SSEVPV
Trigger: GACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGG...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp CTTGCTCCTCTGAGGTGCCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCCCCCACCAGCTCACTTaGTCCTCTGAGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LAPLRCLSRRSGVCPGRCPHQLT*SSEVPV
Trigger: GACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGG...GCACCTCCCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR GCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTCCGGTTGCCTGTGCTTaGCTTGGGCTGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSPVACA*LGLPGR
Trigger: CCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGG...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCGCTGCGCTCCAGGCTaGGCCGTCGCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRCAPG*AVAPRR
Trigger: TCTTCGAGGAGCGACGGCGCAGCCTGGAGCGCAGCG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCGGGGATGGGGCACGCTaGAGCGTGGCGCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPAGDGAR*SVARRD
Trigger: GTCCCTGCGCGCCACGCTGCAGCGTGCCCCATCCCC...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCCCGGCTTCTCCGCGCTaGTCGGAGAGGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPAPASPR*SERAAG
Trigger: CCCAGCCGCCCTCTCCGAGCAGCGCGGAGAAGCCGG...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCTCCTCCGGCCCTCTaGGAAGCCTCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYPPPAL*EASSLP
Trigger: AGGCAGAGAAGAGGCTTCGCAGAGGGCCGGAGGAGG...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCCTTGAGCAGCACATCTaGCCCTGGTGCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: TGGLAQLVGGGGHIAPGILEQHI*PWCHHH
Trigger: GTGGTGGTGGCACCAGGGGCAGATGTGCTGCTCAAG...GATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCTGACCCATCCTTGTaGCAGGACACTTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPADPSL*QDTWGG
Trigger: CCCGCCCCAAGTGTCCTGGCACAAGGATGGGTCAGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCATAGCTCCCGGCATCTaGTGCCCTGGCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPIAPGI*CPGLPE
Trigger: CTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTAT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATGGCTTGGGCTCCCCCTaGACGCGGATGCTCATGATG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYGLGSP*TRMLMM
Trigger: CATCATGAGCATCCGCGTGCAGGGGGAGCCCAAGCC...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAAGCGGGCCTCGCACTaGCGAGCACCATACTCATTG +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHKRASH*RAPYSL
Trigger: CAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTT...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTGCAGACCCCCGTCCTaGCGCAGCCGCAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPCRPPS*RSRKFS
Trigger: TGAGAACTTGCGGCTGCGGCAGGACGGGGGTCTGCA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCCTGTACTGTGTCATaGGCCGGTCGTCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPCTVS*AGRRCS
Trigger: AGAGCAGCGACGACCGGCGCATGACACAGTACAGGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCCAGCACCTGGTGCTaGACTGTGTACGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPSTWC*TVYVRE
Trigger: CTCCCTGACGTACACAGTGCAGCACCAGGTGCTGGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCAGGCCTGTGACCAGTaGCGTCCACTGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPQACDQ*RPLVRA
Trigger: GGCTCGGACCAGTGGACGGCACTGGTCACAGGCCTG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCCGAGCAGGTCTGTGTaGCGTGACGGTTTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPPSRSV*RDGFGR
Trigger: CCGCCCGAAACCGTCACGGCACACAGACCTGCTCGG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCGCTCTCAGCCGAGCTaGCCCTGCGGAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRSQPS*PCGALP
Trigger: GGGGAGAGCTCCGCAGGGGCAGCTCGGCTGAGAGCG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCACCCTGGGAGAAGCTaGTGCTCTTTTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWHPGRS*CSFAGP
Trigger: GGGGCCTGCAAAAGAGCAGCAGCTTCTCCCAGGGTG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGCTGGGCCGGTATATaGCATCCTCCTCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGWAGI*HPPPRP
Trigger: GGGCCGAGGAGGAGGATGGCATATACCGGCCCAGCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCCGAGTCCTCGCTGCTaGCACTGCGCTGCAATCGGC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGPSPRC*HCAAIG
Trigger: GCCGATTGCAGCGCAGTGGCAGCAGCGAGGACTCGG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCGTATACGTGCAAGGTaGCCGGCTGTCTCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWRIRAR*PAVSRL
Trigger: AAGCCGGGAGACAGCCGGGCACCTTGCACGTATACG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCCTGAGCTCACAGGGTaGCACACAGACTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWPELTG*HTDSPS
Trigger: GGATGGGGAGTCTGTGTGGCACCCTGTGAGCTCAGG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTTGCTGAAGGGCCCCTaGCCAGCACGGTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPLLKGP*PARLAQ
Trigger: CTGTGCCAACCGTGCTGGGCAGGGGCCCTTCAGCAA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCAGCCCTGGGCCCCTaGCACTGTATCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPALGP*HCICVL
Trigger: CAGGACACAGATACAGTGGCAGGGGCCCAGGGCTGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCATGCACTCGCCCGGTaGTCCCCTTCAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYHALAR*SPSGRD
Trigger: GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATG...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGGCCCCTCCATGCCATaGCGTAATCTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHGPSMP*RNLSHS
Trigger: AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGCCTTGGGCCCCTCCATaGCATGCCGTAATCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGPWAPP*HAVISP
Trigger: GGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGG...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCCTAGGAGACAAGTCTaGGGGGCCGGCGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSPRRQV*GAGGLP
Trigger: AGGCAGGCCGCCGGCCCCCCAGACTTGTCTCCTAGG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGGAGCAGCGCGGATTTaGAAGGAGGCGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPGAARI*KEAAGQ
Trigger: CTGCCCAGCCGCCTCCTTCCAAATCCGCGCTGCTCC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTTCGCTCAGTGGCGTCTaGGGTCGGGATTCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPSLSGV*GRDSAV
Trigger: CACCGCGGAATCCCGACCCCAGACGCCACTGAGCGA...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGAGGCCGCTTTCTGCTaGAACAGGCGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSEAAFC*NRRRRS
Trigger: CGAGCGGCGCCGCCTGTTCCAGCAGAAAGCGGCCTC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCATGCGGCCCAGCTCCTaGGCGAAGCGCAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLMRPSS*AKRSSR
Trigger: CCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCAT...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTCCTGCACTCCTGGATaGCTCTGCTCCGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPSCTPG*LCSGSA
Trigger: CGCTGACCCGGAGCAGAGCCATCCAGGAGTGCAGGA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGGGGTGCTTTCGTCCTaGCCTCTGGGGGATCGGCGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSGVLSS*PLGDRR
Trigger: CCGCCGATCCCCCAGAGGCCAGGACGAAAGCACCCC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCTCGTTGGTGGCGGTaGCCATATAGCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVARWWR*PYSSRH
Trigger: ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCGCTCGTTGGTGGCGGTaGCCATATAGCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: TGGLAQLVGGGGHIAPGIARWWR*PYSSRH
Trigger: ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGC...GATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCTGGCCCAGCTCGTTaGTGGCGGTGGCCATATAGC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPGPAR*WRWPYS
Trigger: GCTATATGGCCACCGCCACCAACGAGCTGGGCCAGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTGGGACTGGGCTTCATaGTGGGGGTTCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGWDWAS*WGFAAR
Trigger: CCTGGCCGCGAACCCCCACCATGAAGCCCAGTCCCA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACTGGGACTGGGCTTCATaGTGGGGGTTCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDWDWAS*WGFAAR
Trigger: CCTGGCCGCGAACCCCCACCATGAAGCCCAGTCCCA...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAACGGCGGTTCTGGCTaGGACTGGGCTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVNGGSG*DWASWW
Trigger: CCACCATGAAGCCCAGTCCCAGCCAGAACCGCCGTT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCGAAGAACGGCGGTTCTaGCTGGGACTGGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPEERRF*LGLGFM
Trigger: CATGAAGCCCAGTCCCAGCCAGAACCGCCGTTCTTC...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCAGGAGACCACAGGCTTaGGCTCCCCCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGRRPQA*APPARG
Trigger: TCCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTCTGGGCGCACGGGCTaGCGGTTTCTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGSGRTG*RFLSQE
Trigger: CTCCTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACTCTGGGCGCACGGGCTaGCGGTTTCTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDSGRTG*RFLSQE
Trigger: CTCCTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGA...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTAAAGCGCCGCTGGTCTaGGCGCACGGGCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSKAPLV*AHGLAV
Trigger: AACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTT...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCACCAGTGCCGTCCACTaGTCCGAGCCCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGTSAVH*SEPSTW
Trigger: CCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGAGGGGAGGGCCTCTaGGCTGGGAGCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGGEGL*AGSLLV
Trigger: GACCAGGAGGCTCCCAGCCCAGAGGCCCTCCCCTCC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTTCTGGAGCCTTGTCTTaGGCAGGCTGGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPSGALS*AGWGAG
Trigger: CCCCGCACCCCAGCCTGCCCAAGACAAGGCTCCAGA...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCAAAGACAGCAGCGTaGGGCTTGGGCTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAKTAA*GLGSEG
Trigger: GCCTTCAGAGCCCAAGCCCCACGCTGCTGTCTTTGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGTGGGGAGGCCACCCTaGCAAAGACAGCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGVGRPP*QRQQRG
Trigger: CCCACGCTGCTGTCTTTGCCAGGGTGGCCTCCCCAC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTCTCGCCCTCGGACGTaGCCCTGCGAAGCCGTCCGA +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSSRPRT*PCEAVR
Trigger: TCGGACGGCTTCGCAGGGCCACGTCCGAGGGCGAGA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCTGAGGAGCCCGACGTaGCGCTGGCCTCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLRSPT*RWPRSP
Trigger: TGGGCTCCGAGGCCAGCGCCACGTCGGGCTCCTCAG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCTGCCCAGCACGGTTaGCACAGGCCACACGGAACC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPAQHG*HRPHGT
Trigger: GGTTCCGTGTGGCCTGTGCCAACCGTGCTGGGCAGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGGTACTGGGTAGGGTaGGCTCCGCTGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGYWVG*APLAGQ
Trigger: CTGCCCGGCCAGCGGAGCCCACCCTACCCAGTACCC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGTCACTTGGGGTGACGTaGGTACTGGGTAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWSLGVT*VLGRVG
Trigger: GCCCACCCTACCCAGTACCCACGTCACCCCAAGTGA...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCACCAAAGCGGCCCCTaGCTTTCTCCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVHQSGP*LSPPGR
Trigger: CCTTCCTGGAGGAGAAAGCCAGGGGCCGCTTTGGTG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGACATGATCCGCTCGTaGTGCAGGGTCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPDMIRS*CRVRST
Trigger: GGTGCTGCGGACCCTGCACCACGAGCGGATCATGTC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCGTTTCCTGGGGGTCTaGCTCATAGAACGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVRFLGV*LIERGA
Trigger: CGCTCCCCGTTCTATGAGCCAGACCCCCAGGAAACG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGCGTCCTGCAACCATaGGTGGGCCAGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGVLQP*VGQAVL
Trigger: CAGGACTGCCTGGCCCACCCATGGTTGCAGGACGCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGTGAAGGTGAGCGTCTaGCGGCGCAGCTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVVKVSV*RRSFIR
Trigger: CCTGATGAAGCTGCGCCGCCAGACGCTCACCTTCAC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGTCCCGTGGCATTGGTaGGAACCCCAGTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWVPWHW*EPQLKP
Trigger: GGGCTTCAACTGGGGTTCCCACCAATGCCACGGGAC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGACTCTGGCTTTGGCCTaGGGTGGCATCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVTLALA*GGIRSR
Trigger: CCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCCCACTCTGGCTTTaGCCTGGGGTGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLPLWL*PGVASG
Trigger: ACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCTCATGTCCCAGCCCTaGGCCCCTGCCACTGTATCT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVLMSQP*APATVS
Trigger: AGATACAGTGGCAGGGGCCCAGGGCTGGGACATGAG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GTTGAGGCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCGCGGAAAACTTCGCATaGGTGAGTCGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VEAEGRAPPCATRSEGRCAENFA*VSRPKA
Trigger: GGCCTTTGGCCGACTCACCCATGCGAAGTTTTCCGC...GCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCGACCTCCAGCACTGTaGGCACCGCCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRPPAL*APPRRR
Trigger: CCTCCTGCGAGGCGGTGCTCACAGTGCTGGAGGTCG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCTCACTTGCTCCTCTaGGGTGCCTGTCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPAHLLL*GACHGG
Trigger: ACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGGAAAGGCTATCCTCTaGCCCCCAGCTTGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGGKAIL*PPACAH
Trigger: GTGGGCGCAAGCTGGGGGTCAGAGGATAGCCTTTCC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGGAAAGGCTATCCTCTaGCCCCCAGCTTGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDGKAIL*PPACAH
Trigger: GTGGGCGCAAGCTGGGGGTCAGAGGATAGCCTTTCC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGTCCTCTGTACAGGCTaGATGCGCTGCCGTACAGGT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVVLCTG*MRCRTG
Trigger: ACCTGTACGGCAGCGCATTCAGCCTGTACAGAGGAC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATGTCCTCTGTACAGGCTaGATGCGCTGCCGTACAGGT +
Preference number: 4 (lower is better)
Translates to: HRWPGPARWWRWPYSSRHVLCTG*MRCRTG
Trigger: ACCTGTACGGCAGCGCATTCAGCCTGTACAGAGGAC...ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR TCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCGGCAGCACAGGCTCCTaGGTGCGACGGTGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPAGSTGS*VRRWGD
Trigger: GTCGCCCCACCGTCGCACTCAGGAGCCTGTGCTGCC...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGGCGCAGCTCGAGGTCTaGGGCCGGGCTGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQAQLEV*GRAALT
Trigger: CGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGC...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGGTCTCACGGTCAGTaGGGCGGCACAGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGSHGQ*GGTGGL
Trigger: CAGGCCACCTGTGCCGCCTCACTGACCGTGAGACCC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTACATACAGCTGGGCTaGGCAGTGGGCCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPYIQLG*AVGLAM
Trigger: CATGGCCAGGCCCACTGCTCAGCCCAGCTGTATGTA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCAGGCCAGATGTCAGTaGCTCCAGACACGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPQARCQ*LQTRGS
Trigger: AGAGCCCCGTGTCTGGAGTCACTGACATCTGGCCTG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCGGTACAGGAGCTGGTaGTGCTGCCCAGTACGTTGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPRYRSW*CCPVRW
Trigger: CCAACGTACTGGGCAGCATCACCAGCTCCTGTACCG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCACAGTCGGGGATGCCTaGGCTCACAGGGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGTVGDA*AHRVPH
Trigger: GTGTGGCACCCTGTGAGCTCAGGCATCCCCGACTGT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCGAGGTACCGAGGGGTaGTGTAGGCCTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRGTEG*CRPRAG
Trigger: CCCTGCACGAGGCCTACATCACCCCTCGGTACCTCG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCCCTGAGATGCACTaGCCCCCAACCCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLPEMH*PPTQNL
Trigger: AAGGTTCTGGGTTGGGGGTCAGTGCATCTCAGGGAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCGCACAGGTGGCCCCCTaGGCTCACTCGCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPAAQVAP*AHSPRT
Trigger: GGTCCGAGGCGAGTGAGCTCAGGGGGCCACCTGTGC...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGCGAGGCATCCTTCCCTaGCTGTCACAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQRGILP*LSQTHR
Trigger: TCTGTGTGTCTGTGACAGTCAGGGAAGGATGCCTCG...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGCACCCGCGGGACGGTaGCCTAGGAGACAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSAPAGR*PRRQVW
Trigger: CCAGACTTGTCTCCTAGGGCACCGTCCCGCGGGTGC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGTGCCCCGGGCTTTCTaGATGGCCACTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPVPRAF*MATESW
Trigger: CCAGCTCTCAGTGGCCATGCAGAAAGCCCGGGGCAC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCCACTGCCCGCTTCCTaGTCCAGGACCGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMPLPAS*SRTVCP
Trigger: CGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGCACAGGCTCCTGAGTaGGACGGTGGGGCGACGTGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMAQAPE*DGGATW
Trigger: CCACGTCGCCCCACCGTCGCACTCAGGAGCCTGTGC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCGCTCCTCGAAGAACTaGAGCTTGTCCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVRSSKN*SLSRMR
Trigger: CCGCATCCTGGACAAGCTGCAGTTCTTCGAGGAGCG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGGGCTGCGCTGACGCGTaGGCTCGTCCAGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQGCADA*ARPARP
Trigger: CGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCC...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCACGTGGAGCGGCGGATaGGGCCCAGCTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPATWSGG*GPAPGR
Trigger: TCGCCCAGGAGCTGGGCCGCATCCGCCGCTCCACGT...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGACTCCTGGATGGCTCTaGTCCGGGTCAGCGGGAATT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWTPGWL*SGSAGI
Trigger: AATTCCCGCTGACCCGGAGCAGAGCCATCCAGGAGT...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTCACATCTGCCCCTGGTaGCACCACCACATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVGGGGHIAPGICCPGLPHICPW*HHHILQ
Trigger: CTGCAGAATGTGGTGGTGGCACCAGGGGCAGATGTG...AGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCTTGAGCAGCACATCTaGCCCTGGTGCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPLEQHI*PWCHHH
Trigger: GTGGTGGTGGCACCAGGGGCAGATGTGCTGCTCAAG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGGCTTGGGCTCCCCCTaGACGCGGATGCTCATGATG +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDGLGSP*TRMLMM
Trigger: CATCATGAGCATCCGCGTGCAGGGGGAGCCCAAGCC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTAGCATCGCCACGCTCTaGAGCCAGGATCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSSIATL*SQDPQP
Trigger: CGGCTGCGGATCCTGGCTGCAGAGCGTGGCGATGCT...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGAAGCGGGCCTCGCACTaGCGAGCACCATACTCATTG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWKRASH*RAPYSL
Trigger: CAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTT...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCTTGCATTTGAGCAGTaGAGGCTGCAGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPLAFEQ*RLQQAA
Trigger: GGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCCCCTCGTCCTCGCTaGCCACATGGGCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGAPRPR*PHGQCA
Trigger: TGCACATTGCCCATGTGGGCAGCGAGGACGAGGGGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGTCACAGCCACCACCTaGGGGGCGCCATCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMVTATT*GAPSGG
Trigger: CCCTCCAGATGGCGCCCCGCAGGTGGTGGCTGTGAC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAGGACCCGGAAGATGTaGTGGACCCCCTTACGCAGC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPRTRKM*WTPLRS
Trigger: GCTGCGTAAGGGGGTCCAGCACATCTTCCGGGTCCT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCCGTGCTCCAGCAGCTaGACAGGCTCAGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPPCSSS*TGSEGG
Trigger: ACCCCCTTCTGAGCCTGTGCAGCTGCTGGAGCACGG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCGAAGCTCACATGGCTaGTCTCGGTCAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVRSSHG*SRSAAP
Trigger: AGGTGCTGCTGACCGAGAGCAGCCATGTGAGCTTCG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCTCACAGATCCGCACCTaGTGCTCGCCCGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSQIRT*CSPAAP
Trigger: TGGTGCTGCGGGCGAGCAGCAGGTGCGGATCTGTGA...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCTCGCTGCTGCCACTaGGCTGCAATCGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPRCCH*AAIGWT
Trigger: TGTCCAGCCGATTGCAGCGCAGTGGCAGCAGCGAGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAGTAACAGTCGGGGATaGCTGAGCTCACAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSNSRG*LSSQGA
Trigger: GGCACCCTGTGAGCTCAGGCATCCCCGACTGTTACT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGCCGGGCTGAGGCTCTaGACAGTCACCTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPAGLRL*TVTLVG
Trigger: GCCTACCAAGGTGACTGTGCAGAGCCTCAGCCCGGC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGTGGCCCCCTGCCCCTaGTCCTGCACCAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDVAPCP*SCTKLG
Trigger: ACCAAGTTTGGTGCAGGAGCAGGGGCAGGGGGCCAC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCCCGGGCTTTCTGCATaGCCACTGAGAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPPGLSA*PLRAGL
Trigger: CAGCCCAGCTCTCAGTGGCCATGCAGAAAGCCCGGG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCGGCCCCGCTCGTTCTaGGCCATGCAGCTGTACACG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRPRSF*AMQLYT
Trigger: CGTGTACAGCTGCATGGCCCAGAACGAGCGGGGCCG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACAGACCCGAGGGGACGGTaGGGGGAGCAGCGCGGATTT +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTDPRGR*GEQRGF
Trigger: AAATCCGCGCTGCTCCCCCCACCGTCCCCTCGGGTC...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCTTCTCTTCGGTGGTaGTGTCCTCGGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPASLRW*CPRAAQ
Trigger: CTGTGCTGCCCGAGGACACCACCACCGAAGAGAAGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCTCGGCCACGCTGCCTaGCGCCCGCAGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLGHAA*RPQFFL
Trigger: CAGGAAGAACTGCGGGCGCCAGGCAGCGTGGCCGAG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGCGATGTCTTGGGGGTaGAGGGCCGAGAGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPAMSWG*RAERRA
Trigger: CGCTCTTCTCTCGGCCCTCCACCCCCAAGACATCGC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGCCCAGCTCGTTGGTaGCGGTGGCCATATAGCTCC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGPARW*RWPYSS
Trigger: GGAGCTATATGGCCACCGCCACCAACGAGCTGGGCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGCCTGGCCCAGCTCGTTaGTGGCGGTGGCCATATAGC +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRPGPAR*WRWPYS
Trigger: GCTATATGGCCACCGCCACCAACGAGCTGGGCCAGG...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGACTGGGCTTCATGGTaGGGGTTCGCGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDDWASW*GFAARS
Trigger: AGACCTGGCCGCGAACCCCCACCATGAAGCCCAGTC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTGGGACTGGGCTTCATaGTGGGGGTTCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLWDWAS*WGFAAR
Trigger: CCTGGCCGCGAACCCCCACCATGAAGCCCAGTCCCA...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATAACGGCGGTTCTGGCTaGGACTGGGCTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYNGGSG*DWASWW
Trigger: CCACCATGAAGCCCAGTCCCAGCCAGAACCGCCGTT...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCTCCGCAAAGCGCCGCTaGTCTGGGCGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPASAKRR*SGRTGW
Trigger: CCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGA...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTCTCCAGCTTCGAGCTaGGGCCTGAGGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSSPASS*GLRRLS
Trigger: GGACAGCCGCCTCAGGCCCCAGCTCGAAGCTGGAGA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTGCTCTGGATGCGGTaGCCATTGTGGAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLLWMR*PLWNQL
Trigger: CAGCTGGTTCCACAATGGCCACCGCATCCAGAGCAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTCCGAGCCCAGCACCTaGTGCTGCACTGTGTACGTC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPSEPST*CCTVYV
Trigger: GACGTACACAGTGCAGCACCAGGTGCTGGGCTCGGA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGACTGGTTCTGGCCTaGGCTCTGGAGCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGLVLA*ALEPCL
Trigger: AAGACAAGGCTCCAGAGCCCAGGCCAGAACCAGTCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGCAGGCAGAGCAGGGTaGCTGCCTCCCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMAGRAG*LPPPPA
Trigger: TGCTGGAGGGGGAGGCAGCCACCCTGCTCTGCCTGC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTGGAGGGGTTTGGGGTaGTGGACCCACAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPWRGLG*WTHSLE
Trigger: CTCAAGGCTGTGGGTCCACCACCCCAAACCCCTCCA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCTTCGTGGAGGGGTTTaGGGTGGTGGACCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPLRGGV*GGGPTA
Trigger: GGCTGTGGGTCCACCACCCCAAACCCCTCCACGAAG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCGAACGTTCGCCCCGTaGCATTCTCCCGGCACGCTC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRTFAP*HSPGTL
Trigger: GAGCGTGCCGGGAGAATGCCACGGGGCGAACGTTCG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCATGGGTCTCCCACTCTaGCTTTGGCCTGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPMGLPL*LWPGVA
Trigger: TGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCAT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCAGTGGGGACATCCTTaGGCCAGCAGAGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSQWGHP*ASRAPR
Trigger: CCTGGGCGCTCTGCTGGCCCAAGGATGTCCCCACTG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGCCATGGAGGGGCAGTaGGGACATCCTTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSAMEGQ*GHPWAS
Trigger: GCTGGCCCAAGGATGTCCCCACTGCCCCTCCATGGC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGAAGGCCAGAGGCCATaGAGGGGCAGTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPEGQRP*RGSGDI
Trigger: GATGTCCCCACTGCCCCTCCATGGCCTCTGGCCTTC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCTGGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTGAATGGCCGGTTTTCTaGAAACGCTTCTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: AGQGGVGLRWPVEAEGRAEWPVF*KRFFTH
Trigger: GTGGGTGAAGAAGCGTTTCCAGAAAACCGGCCATTC...AGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp GAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATAAGGCCCGGCGGGAATaGCCGGTTTTCTGGAAACGC +
Preference number: 4 (lower is better)
Translates to: EGPVIPKLQALGSLHIADKARRE*PVFWKR
Trigger: GCGTTTCCAGAAAACCGGCCATTCCCGCCGGGCCTT...ATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp AGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTCTCTACGGTCCACGCACCATaGGTGAGTCGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SPCRGVLVSRPPFCWVLSTVHAP*VSRPKA
Trigger: GGCCTTTGGCCGACTCACCCATGGTGCGTGGACCGT...AGAGAGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGCATCAGCACAGAGCCTaGGGCCTCTGGCTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGHQHRA*GLWLLV
Trigger: GACCAAAAGCCAGAGGCCCCAGGCTCTGTGCTGATG...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCGGAGGGGGCCCCAAATaGGCCCTAAACCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLGGGPK*ALNLPG
Trigger: CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCC...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCATTGTGGAACCAGCTaGTGGTGGGGTAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPHCGTS*WWGRAG
Trigger: GCCTGCCCTACCCCACCATCAGCTGGTTCCACAATG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTTGGCCTGGCTGGGGATaGACTTGGCCGCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPWPGWG*TWPQTP
Trigger: TGGAGTTTGCGGCCAAGTTCATCCCCAGCCAGGCCA...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTCTGAGCATAGGGTGTaGGGGGCAGCGCTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPSEHRV*GAALGF
Trigger: AAACCCTAGCGCTGCCCCTCACACCCTATGCTCAGA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCTCTCAGAAGAGTTGCTaGAGGGCCCCTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSQKSC*RAPAQH
Trigger: GTGCTGGGCAGGGGCCCTTCAGCAACTCTTCTGAGA...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTGGGCTCACTTGGGGTaGCGTGGGTACTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSWAHLG*RGYWVG
Trigger: CCCTACCCAGTACCCACGTCACCCCAAGTGAGCCCA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCCTCGTGCAGGGACATaGTCCGCTCGTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMPRAGT*SARGAG
Trigger: CCCTGCACCACGAGCGGATCATGTCCCTGCACGAGG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCACAGCTCTCAGCAATaGGCACGAGGTACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGHSSQQ*ARGTEG
Trigger: CCCCTCGGTACCTCGTGCTCATTGCTGAGAGCTGTG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGTGGGAACCCCAGTTaGAGCCCGAGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGGNPS*SPRPGC
Trigger: ACAGCCAGGCCTCGGGCTTCAACTGGGGTTCCCACC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTATCCTCAGCCGTCTCTaGGTCGTAACTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GQGGVGLRWPVEAEGRAPILSRL*VVTLLS
Trigger: AGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGAT...AGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCATCCTCGCCTCGCGTaGCCCGGGCTTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMHPRLA*PGLSAW
Trigger: CCATGCAGAAAGCCCGGGGCACGCGAGGCGAGGATG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGCTCGTTCTGGGCCATaGAGCTGTACACGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSARSGP*SCTRRR
Trigger: ACGCCGGCGTGTACAGCTGCATGGCCCAGAACGAGC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGTGTGTCCAGGGAGGTaGCCACCAGGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPVCPGR*PPGCQN
Trigger: GTTCTGACACCCTGGTGGGCACCTCCCTGGACACAC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTCTCTGTGTGTCCAGGGAGGTaGCCACCAGGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SPCRGVLVSRPPFCWVLSVCPGR*PPGCQN
Trigger: GTTCTGACACCCTGGTGGGCACCTCCCTGGACACAC...AGAGAGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR GCA 90 bp AGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTCTCTTGCTCCTCTGAGGTaGCTGTCACGGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SSRRWVPCTSLMSSSAVSLAPLR*LSRRSG
Trigger: CCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAG...AGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCAGATTAGCTCGAGATaGCCGCACCAGCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGQISSR*PHQRLH
Trigger: GTGGAGCCGCTGGTGCGGGCATCTCGAGCTAATCTG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACTCTGTACAGGCTGAATaGGCTGCCGTACAGGTCACT +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHSVQAE*AAVQVT
Trigger: AGTGACCTGTACGGCAGCGCATTCAGCCTGTACAGA...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACACGCTCCGACTTGGGCTaGTCCAGAGAGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTRSDLG*SRERAL
Trigger: CAAGGCCCGCTCTCTGGAGCAGCCCAAGTCGGAGCG...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGGCTTGGGCTCCCCCTaGACGCGGATGCTCATGATG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSGLGSP*TRMLMM
Trigger: CATCATGAGCATCCGCGTGCAGGGGGAGCCCAAGCC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGCATCGCCACGCTCTaGAGCCAGGATCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSIATL*SQDPQP
Trigger: CGGCTGCGGATCCTGGCTGCAGAGCGTGGCGATGCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACAAGCATCGCCACGCTCTaGAGCCAGGATCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTSIATL*SQDPQP
Trigger: CGGCTGCGGATCCTGGCTGCAGAGCGTGGCGATGCT...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATAAGCGGGCCTCGCACTaGCGAGCACCATACTCATTG +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYKRASH*RAPYSL
Trigger: CAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTT...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCCGTGTGAACAGGGGTaGCAACGAGGGCCGCACGGT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMPCEQG*QRGPHG
Trigger: ACCGTGCGGCCCTCGTTGGCACCCCTGTTCACACGG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCCACATGGGCAATGTaGAGTGAGTGCAGACCCCCG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPTWAM*SECRPP
Trigger: CGGGGGTCTGCACTCACTGCACATTGCCCATGTGGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCGTCGCTGCTCTGGATaGGGTGGCCATTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPRRCSG*GGHCGT
Trigger: GGTTCCACAATGGCCACCGCATCCAGAGCAGCGACG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGCTTGACATCGAGGTaGAGCACGTGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGLTSR*STWLWC
Trigger: GCACCAGAGCCACGTGCTGCACCTCGATGTCAAGCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCAGATCCGCACCTGCTaGTCGCCCGCAGCACCATCC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMQIRTC*SPAAPS
Trigger: GGATGGTGCTGCGGGCGAGCAGCAGGTGCGGATCTG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGCCCCGGGCCTCCCTaGTCAGGCTCAGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSPGPP*SGSGMW
Trigger: CCACATTCCTGAGCCTGAGCAGGGAGGCCCGGGGCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCCTGGGAGAAGCTGCTaGTCTTTTGCAGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGPGRSC*SFAGPG
Trigger: ACCGGGGCCTGCAAAAGAGCAGCAGCTTCTCCCAGG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCTGCTGCCACTGCGCTaGAATCGGCTGGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLLPLR*NRLDSR
Trigger: GCGGCTGTCCAGCCGATTGCAGCGCAGTGGCAGCAG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGGGATGCTGAGCAGCTaGCGCCCATCTTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPGMLSS*RPSLQD
Trigger: GTCCTGCAAAGATGGGCGGCAGCTGCTCAGCATCCC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCTCAGGGGCTGGTGGTaGAGACACAAAGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVLRGWW*RHKGSH
Trigger: GTGACTTCCTTTGTGTCTGCACCACCAGCCCCTGAG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGCACCTCGTACTCCTaGAGGACCCGCCGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSTSYS*RTRRLP
Trigger: GGGCAAGCGGCGGGTCCTGCAGGAGTACGAGGTGCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCAGCAGCAGTAGCACATaGACTCGCCCGGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLSSSST*TRPVLP
Trigger: GGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCT...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCTGGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCGTAACTTTGCTTTCTaGAGGAGCGGAAAACTTCGC +
Preference number: 4 (lower is better)
Translates to: AGQGGVGLRWPVEAEGRARNFAF*RSGKLR
Trigger: GCGAAGTTTTCCGCTCCTGCAGAAAGCAAAGTTACG...AGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGTGCCGTACAGGTCACTaGCCACGGAAAGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVCRTGH*PRKGYP
Trigger: AGGATAGCCTTTCCGTGGCCAGTGACCTGTACGGCA...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTGAGTGCCGTACAGGTCACTaGCCACGGAAAGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: VGGGGHIAPGICCPGLPECRTGH*PRKGYP
Trigger: AGGATAGCCTTTCCGTGGCCAGTGACCTGTACGGCA...CTCAGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGCTTCTCTTCGGTGGTaGTGTCCTCGGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRASLRW*CPRAAQ
Trigger: CTGTGCTGCCCGAGGACACCACCACCGAAGAGAAGC...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCCGGCCCGCGATGTCTTaGGGGTGGAGGGCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPARPAMS*GWRAER
Trigger: TCTCTCGGCCCTCCACCCCCAAGACATCGCGGGCCG...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCTGCACTCCTGGATaGCTCTGCTCCGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLSCTPG*LCSGSA
Trigger: CGCTGACCCGGAGCAGAGCCATCCAGGAGTGCAGGA...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATTTCTTCTCCAAGGTCTaGGGTACAGCAGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYFFSKV*GTAAPS
Trigger: GGAGGGCGCTGCTGTACCCCAGACCTTGGAGAAGAA...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCTCTGGGAACTCCTCTaGGGGGCTCAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYLWELL*GAQVFL
Trigger: GAGGAATACCTGAGCCCCCCAGAGGAGTTCCCAGAG...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCGACTGGGCTTCATGGTaGGGGTTCGCGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLDWASW*GFAARS
Trigger: AGACCTGGCCGCGAACCCCCACCATGAAGCCCAGTC...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGAAGAACGGCGGTTCTaGCTGGGACTGGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPEERRF*LGLGFM
Trigger: CATGAAGCCCAGTCCCAGCCAGAACCGCCGTTCTTC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCAGCTCACCCTGCTCTaGCTCCTCGGGAATGGATGG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPQLTLL*LLGNGW
Trigger: CCATCCATTCCCGAGGAGCCAGAGCAGGGTGAGCTG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCCTGGCACTCTAGCATaGCCTCCTTGGCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPPGTLA*PPWPVP
Trigger: TGGGACTGGCCAAGGAGGCCATGCTAGAGTGCCAGG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGGGAGTCCGGGTCGATaGCCATGTCCAGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSGSPGR*PCPDSW
Trigger: CCAGGAGTCTGGACATGGCCATCGACCCGGACTCCC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACCCGGAAGATGTGCTaGACCCCCTTACGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPTRKMC*TPLRSP
Trigger: AGGGCTGCGTAAGGGGGTCCAGCACATCTTCCGGGT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCATGATGTCCGGCAGTaGTTTTCCCTCGACCACCAC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWHDVRQ*FSLDHH
Trigger: GTGGTGGTCGAGGGAAAACCACTGCCGGACATCATG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCAGACTCACACACGGTaGGTTTCCTGGCGATTCGCT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVQTHTR*VSWRFA
Trigger: AGCGAATCGCCAGGAAACCCACCGTGTGTGAGTCTG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCATACTGGCAGTACTaGGGCTCTCCTGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPYWQY*GSPGVS
Trigger: GCTGACTCCAGGAGAGCCCCAGTACTGCCAGTATGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGTGGCCTTCTGGGCATaGTCACCCACACCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSVAFWA*SPTPAL
Trigger: CAGAGCGGGTGTGGGTGACCATGCCCAGAAGGCCAC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGGGCCTGCAGCCTCTaGGCATACTCGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRACSL*AYSPSP
Trigger: GGGTGAGGGCGAGTATGCCCAGAGGCTGCAGGCCCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCCCTCCAGCAGCACCTaGTCCTTGAGTTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWPSSST*SLSLMW
Trigger: CCACATCAAACTCAAGGACCAGGTGCTGCTGGAGGG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTACAGGGGCCTCTTGGTaGGCAGCAGATGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPTGASW*AADGTA
Trigger: AGCTGTGCCATCTGCTGCCCACCAAGAGGCCCCTGT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGGGCTCAGGGGCTGGTaGTGCAGACACAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPGLRGW*CRHKGS
Trigger: ACTTCCTTTGTGTCTGCACCACCAGCCCCTGAGCCC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTGGGGGCTCAGGGGCTaGTGGTGCAGACACAAAGGA +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGWGLRG*WCRHKG
Trigger: TCCTTTGTGTCTGCACCACCAGCCCCTGAGCCCCCA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGACCCTGTCGAAGAGTaGTACCCTCAGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGDPVEE*YPQAWE
Trigger: CTCCCAGGCCTGAGGGTACCACTCTTCGACAGGGTC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCATAGGGCACGATCTTaGCCACGAACGTTCGCCCCG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPHRARS*PRTFAP
Trigger: CGGGGCGAACGTTCGTGGCCAAGATCGTGCCCTATG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGGCTTGATGTCTAGGTaGAGCACGTGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGGLMSR*STWWPW
Trigger: CCACGGCCACCACGTGCTCCACCTAGACATCAAGCC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCTCCCCAGATGTCCGTaGCAGAGCCGATGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPLPRCP*QSRWVL
Trigger: GAGAACCCATCGGCTCTGCCACGGACATCTGGGGAG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCTGAGCCTGACCAATaGGTCTCCCACTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAEPDQ*VSHSGF
Trigger: AAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGAAGGCCCGGCGGGAATaGCCGGTTTTCTGGAAACGC +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRKARRE*PVFWKR
Trigger: GCGTTTCCAGAAAACCGGCCATTCCCGCCGGGCCTT...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CTTGCTCCTCTGAGGTGCCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCCCATTAGGCCTCACATaGAGAACAGGGCACCCAGTC +
Preference number: 4 (lower is better)
Translates to: LAPLRCLSRRSGVCPGRCPLGLT*RTGHPV
Trigger: GACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGG...GCACCTCCCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGCATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTC +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRHLWAS*PAQPCV
Trigger: GACACATGGCTGTGCAGGCCAGGAGGCCCACAGATG...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCCTCATCCGAAGACTACGTaGATAGAGAGCGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LVGGGGHIAPGICCPGLPHPKTT*IESARP
Trigger: AGGACGGGCGCTCTCTATCCACGTAGTCTTCGGATG...AGGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR TCA 90 bp ACCCAGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: TQSMQGCASEPPSLLLGPFPAHR*CHPQPS
Trigger: AGACGGCTGAGGATGACATCAGCGATGTGCAGGGAA...AGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR TCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGCTCACTTGCTCCTCTaGGGTGCCTGTCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSAHLLL*GACHGG
Trigger: ACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACACTGCGCAACCCGCTCTaGGGGACGCTGACGTGGATA +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTLRNPL*GTLTWI
Trigger: TATCCACGTCAGCGTCCCTCAGAGCGGGTTGCGCAG...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCATCTTTGGCCGTGCTaGGCTTGCAGGTGTAGACGC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPHLWPC*ACRCRR
Trigger: GCGTCTACACCTGCAAGCTCAGCACGGCCAAAGATG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGATGGGGCAGCCAAAATaGGTCCAGGTAACAACAGGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVMGQPK*VQVTTG
Trigger: CCCTGTTGTTACCTGGACTCATTTTGGCTGCCCCAT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTATGGGCAATGTGCAGTaGGTGCAGACCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSMGNVQ*VQTPVL
Trigger: CAGGACGGGGGTCTGCACTCACTGCACATTGCCCAT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCAGCTTGTTGGCAATaGCGCTCTTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPACWQ*RSCRHR
Trigger: CCGGTGTCTACAAGAGCGTCATTGCCAACAAGCTGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCCTCCACGTCCTCCATaGTGGACTCAAACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSPPRPP*WTQTEG
Trigger: CCCCTCGGTTTGAGTCCATCATGGAGGACGTGGAGG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGACACGGGGCTCTGATTaGCAATCTCGGGTGCTACAA +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVTRGSD*QSRVLQ
Trigger: TTGTAGCACCCGAGATTGTCAATCAGAGCCCCGTGT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAGGAATAGCTTCAGGTaGTCCGTGCTCACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPRNSFR*SVLTSA
Trigger: CGCAGAGGTGAGCACGGATCACCTGAAGCTATTCCT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGACTCGCGGCTGCGCTTaGACTTGGCCTCGAACACGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMTRGCA*TWPRTR
Trigger: CCGTGTTCGAGGCCAAGTTCAAGCGCAGCCGCGAGT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGTCCACATTTCTCCTCTaGGGGATGCTGACAGCTGAC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWSTFLL*GMLTAD
Trigger: GTCAGCTGTCAGCATCCCTCAGAGGAGAAATGTGGA...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPRRWVP*TSLMSS
Trigger: GGATGACATCAGCGATGTGCAGGGAACCCAGCGCCT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCC +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDRRWVP*TSLMSS
Trigger: GGATGACATCAGCGATGTGCAGGGAACCCAGCGCCT...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGTGTGTCCAGGGAGGTaGCCACCAGGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSVCPGR*PPGCQN
Trigger: GTTCTGACACCCTGGTGGGCACCTCCCTGGACACAC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGTCTGTACAGGCTGAATaGGCTGCCGTACAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWSVQAE*AAVQVT
Trigger: AGTGACCTGTACGGCAGCGCATTCAGCCTGTACAGA...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATTCTGTACAGGCTGAATaGGCTGCCGTACAGGTCACT +
Preference number: 4 (lower is better)
Translates to: HRWPGPARWWRWPYSSRHSVQAE*AAVQVT
Trigger: AGTGACCTGTACGGCAGCGCATTCAGCCTGTACAGA...ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACACTCCTGGATGGCTCTaGTCCGGGTCAGCGGGAATT +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDTPGWL*SGSAGI
Trigger: AATTCCCGCTGACCCGGAGCAGAGCCATCCAGGAGT...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp TGGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGGCCACCACCACATTCTaGAGGGGGATCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: WPGPARWWRWPYSSRHLLATTTF*RGISNT
Trigger: TGTGTTTGAGATCCCCCTGCAGAATGTGGTGGTGGC...CAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCACATCTGCCCCTGGTaGCACCACCACATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGHICPW*HHHILQ
Trigger: CTGCAGAATGTGGTGGTGGCACCAGGGGCAGATGTG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCAGCATCGCCACGCTCTaGAGCCAGGATCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPASIATL*SQDPQP
Trigger: CGGCTGCGGATCCTGGCTGCAGAGCGTGGCGATGCT...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCAGCCAACTCTGCTTTaGAGGAGACCTCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPQPTLL*RRPHPP
Trigger: TGGCGGGTGAGGTCTCCTGCAAAGCAGAGTTGGCTG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAGGAGAAAGCACCCCTaGCGATCTCCTGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPRRKHP*RSPGGC
Trigger: ACATCCACCAGGAGATCGGCAGGGGTGCTTTCTCCT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCACCTCTGCGCCCTTTaGCTGAGTTTTGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWHLCAL*LSFEPR
Trigger: CCTTGGTTCAAAACTCAGGCAAAGGGCGCAGAGGTG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAAGCTGCTGCTCTTTTaGAGGCCCCGGTTCTCGAGT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPKLLLF*RPRFSS
Trigger: ACTCGAGAACCGGGGCCTGCAAAAGAGCAGCAGCTT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCACTGTATCTGTGTCCTaGCCCCGCTTTGCCACACTG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPTVSVS*PRFATL
Trigger: CAGTGTGGCAAAGCGGGGGCAGGACACAGATACAGT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCGTGGGCCTCCTGGCCTaGACAGCCATGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLVGLLA*TAMCPL
Trigger: AAGTGGACACATGGCTGTGCAGGCCAGGAGGCCCAC...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGGCCCCTCCATGCCATaGCGTAATCTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRGPSMP*RNLSHS
Trigger: AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCC...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTCCTTGGGCCCCTCCATaGCATGCCGTAATCTCTCCC +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSPWAPP*HAVISP
Trigger: GGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGG...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACTTTGTCAACAGCCCCTaGTCCTTGGGCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDFVNSP*SLGPSM
Trigger: CATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAA...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACAGTGGCCCCCTGCCCCTaGTCCTGCACCAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTVAPCP*SCTKLG
Trigger: ACCAAGTTTGGTGCAGGAGCAGGGGCAGGGGGCCAC...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCACAGCCCTACAGCTTaGACCCCCAAACGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLHSPTA*TPKRSR
Trigger: CCTCGAGCGTTTGGGGGTGCAAGCTGTAGGGCTGTG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396686.5
CDS-3UTR CCA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATTGCCGTACAGGTCACTaGCCACGGAAAGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYCRTGH*PRKGYP
Trigger: AGGATAGCCTTTCCGTGGCCAGTGACCTGTACGGCA...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCTCGCTTCTCTTCGGTaGTGGTGTCCTCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSLASLR*WCPRAA
Trigger: TGCTGCCCGAGGACACCACCACCGAAGAGAAGCGAG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCGGGTCAGCGGGAATTaGTCCCGACGCCTAACCTCC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRVSGN*SRRLTS
Trigger: GGAGGTTAGGCGTCGGGACCAATTCCCGCTGACCCG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCGAGCTCAGGGGAGGTaGGCCGGGCCCGGCGACCTT +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRRAQGR*AGPGDL
Trigger: AAGGTCGCCGGGCCCGGCCCACCTCCCCTGAGCTCG...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCGCTCGTTGGTGGCGGTaGCCATATAGCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLARWWR*PYSSRH
Trigger: ATGCCGGGAGCTATATGGCCACCGCCACCAACGAGC...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCTCTGGGAACTCCTCTaGGGGGCTCAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPLWELL*GAQVFL
Trigger: GAGGAATACCTGAGCCCCCCAGAGGAGTTCCCAGAG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGACTGGGCTTCATGGTaGGGGTTCGCGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMDWASW*GFAARS
Trigger: AGACCTGGCCGCGAACCCCCACCATGAAGCCCAGTC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGAAGAACGGCGGTTCTaGCTGGGACTGGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDEERRF*LGLGFM
Trigger: CATGAAGCCCAGTCCCAGCCAGAACCGCCGTTCTTC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTTCCTCGCTGCCCACATaGGCAATGTGCAGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPSSLPT*AMCSEC
Trigger: GCACTCACTGCACATTGCCCATGTGGGCAGCGAGGA...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCAGTGGGCCTGGCCATaGGTGTTAACAGCACTGACC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPQWAWP*VLTALT
Trigger: GGTCAGTGCTGTTAACACCCATGGCCAGGCCCACTG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCTGAGCAGTGGGCCTaGCCATGGGTGTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGAEQWA*PWVLTA
Trigger: TGCTGTTAACACCCATGGCCAGGCCCACTGCTCAGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCCTCGGGAATGGATaGCATCTTCTCCAGCTTCGA +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLLGNG*HLLQLR
Trigger: TCGAAGCTGGAGAAGATGCCATCCATTCCCGAGGAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGCAGGAAGTCAGGAATaGACAGCCGCTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPAGSQE*TAAPAH
Trigger: GTGAGCTGGAGCGGCTGTCCATTCCTGACTTCCTGC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCTCCAGGTCCTGCAGTaGCCGCAGGAAGTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPLQVLQ*PQEVRN
Trigger: ATTCCTGACTTCCTGCGGCCACTGCAGGACCTGGAG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGGGAACACCAAGCGATaGACATCCCTGTACTGTGTC +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWGNTKR*TSLYCV
Trigger: GACACAGTACAGGGATGTCCATCGCTTGGTGTTCCC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTACACGAAGCTCACATaGCTGCTCTCGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPYTKLT*LLSVSS
Trigger: GCTGCTGACCGAGAGCAGCCATGTGAGCTTCGTGTA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCAGTCTCCTTCCTCGATaGTCCTCATCCTCCCCGACC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSLLPR*SSSSPT
Trigger: GGTCGGGGAGGATGAGGACCATCGAGGAAGGAGACT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTACACGGTGGGTTTCCTaGCGATTCGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPTRWVS*RFAPAA
Trigger: AGCTGCTGGAGCGAATCGCCAGGAAACCCACCGTGT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCTGGAGTCAGCTCCTaGGCATTCCCAAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPGVSS*AFPKSQ
Trigger: CTGTGACTTTGGGAATGCCCAGGAGCTGACTCCAGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGCTCGGACTGGTTCTaGCCTGGGCTCTGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGSDWF*PGLWSL
Trigger: AAGGCTCCAGAGCCCAGGCCAGAACCAGTCCGAGCC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTAGGGGTTTGGGGTGGTaGACCCACAGCCTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRGLGW*THSLER
Trigger: TCGCTCAAGGCTGTGGGTCCACCACCCCAAACCCCT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTAGGCTTGGGCTCACTTaGGGTGACGTGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRLGLT*GDVGTG
Trigger: CCCAGTACCCACGTCACCCCAAGTGAGCCCAAGCCT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTTGAGGAGTGGAGGCTaGGATCGGGGTCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSLRSGG*DRGPSV
Trigger: GACACTGGGACCCCGATCCCAGCCTCCACTCCTCAA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCGTGGCAGAGCCGATaGGTTCTCCCTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPWQSR*VLPSPS
Trigger: AGATGGTGAAGGGAGAACCCATCGGCTCTGCCACGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCAGGGCTGTATCCACTaGACAGGAGGACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPQGCIH*TGGQSE
Trigger: CTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGATGGCTGGGAGGGATaGTCAGGACAACATGGGCAG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPDGWEG*SGQHGQ
Trigger: CTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAGACAGACAGACAGCTaGATGGCTGGGAGGGATGGT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPRQTDS*MAGRDG
Trigger: ACCATCCCTCCCAGCCATCCAGCTGTCTGTCTGTCT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCAAGTGTGGGGGTGAGTaGGAGGGTTCCACATCTCAT +
Preference number: 4 (lower is better)
Translates to: GPVIPKLQALGSLHIADVKCGGE*EGSTSH
Trigger: ATGAGATGTGGAACCCTCCCACTCACCCCCACACTT...GACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR TCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPFPAHR*CHPQPS
Trigger: AGACGGCTGAGGATGACATCAGCGATGTGCAGGGAA...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RSSRRWVPCTSLMSSSAVFPAHR*CHPQPS
Trigger: AGACGGCTGAGGATGACATCAGCGATGTGCAGGGAA...GACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR TCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCGTCCTCTGTACAGGCTaGATGCGCTGCCGTACAGGT +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLVLCTG*MRCRTG
Trigger: ACCTGTACGGCAGCGCATTCAGCCTGTACAGAGGAC...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCCGCCGACAGGCGGCCTaGGGCCTCGCTCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALRRQAA*GLAQWR
Trigger: ACGCCACTGAGCGAGGCCTCAGGCCGCCTGTCGGCG...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR TCA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGAGCACCATACTCATTaGCCGCTTTGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQEHHTH*PLCKCR
Trigger: TCTACACTTGCAAAGCGGTCAATGAGTATGGTGCTC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCTGGGACCACATCTGTaGCATACAGGTGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPLGPHL*HTGGHS
Trigger: GCTATGCCCACCTGTATGTCACAGATGTGGTCCCAG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGGCTCAGAAGGGGGTaGGGGCTTGCTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRLRRG*GLAAAL
Trigger: AAGAGCAGCAGCAAGCCCTCACCCCCTTCTGAGCCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCTGCCAGCTCCAATGTaGCCGAGCAGGTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLPAPM*PSRSVC
Trigger: GCACACAGACCTGCTCGGTCACATTGGAGCTGGCAG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCGTCCTTGTACCACATaGTGTCCGGCAGTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPRPCTT*CPAVVF
Trigger: GAAAACCACTGCCGGACATCATGTGGTACAAGGACG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCCAGACACGGGGCTCTaGTTGACAATCTCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSPDTGL*LTISGA
Trigger: AGCACCCGAGATTGTCAATCAGAGCCCCGTGTCTGG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGTGGCATTTGTAGCTaGTCTGGGAGCGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGGICS*SGSAAT
Trigger: GGTGGCAGCGCTCCCAGATCAGCTACAAATGCCACC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAGCAGATGGCACAGCTaGAGAATCTTGAGTACCCCT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSRWHS*RILSTP
Trigger: AGGGGTACTCAAGATTCTTCAGCTGTGCCATCTGCT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCACTGGTTTAACCCCTTaGGGAGTGGAGGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGTGLTP*GVEAGI
Trigger: GATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCAAAGTCCACAATCTTaGGGGCATTGTCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPQSPQS*GHCQGP
Trigger: TGGCCCCTGACAATGCCCTCAAGATTGTGGACTTTG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGTCCTTGAAGGTCTATaGGGTAAGAGCCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPVLEGL*GKSPAR
Trigger: TCTGGCTGGGCTCTTACCTCATAGACCTTCAAGGAC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTTTCCTTGGTTCTCCCTaGGATGCACTGACCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPFLGSP*DALTPN
Trigger: GTTGGGGGTCAGTGCATCTCAGGGAGAACCAAGGAA...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGGACAGAGCGAGTGTaGGTGACTGCTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRTERV*VTAGLQ
Trigger: CTGGAGGCCAGCAGTCACTCACACTCGCTCTGTCCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp GCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCCATTCCACGCACCATGGGTaGGTCGGCCAAAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AMNSFPLGLTWRTGHPVHSTHHG*VGQRPG
Trigger: GCCGGGCCTTTGGCCGACTCACCCATGGTGCGTGGA...ATGGACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR TCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGCACAGGTGGCCCCCTaGGCTCACTCGCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRAQVAP*AHSPRT
Trigger: GGTCCGAGGCGAGTGAGCTCAGGGGGCCACCTGTGC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGGTCCGAGAGGTGCCTaGGACAGGGGCGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALGPRGA*DRGAAR
Trigger: CCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGCCGCTCGGCCACGCTaGCTGGCGCCCGCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRAARPR*LAPAVL
Trigger: AAGAACTGCGGGCGCCAGGCAGCGTGGCCGAGCGGC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGCGCGCAGGGACTCGTaGGAGCGCACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRARRDS*ERTSSS
Trigger: GGAGGAGCTGGTGCGCTCGCACGAGTCCCTGCGCGC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGCCACCACCACATTCTaGAGGGGGATCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPATTTF*RGISNT
Trigger: TGTGTTTGAGATCCCCCTGCAGAATGTGGTGGTGGC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACACTTGAGCAGCACATCTaGCCCTGGTGCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTLEQHI*PWCHHH
Trigger: GTGGTGGTGGCACCAGGGGCAGATGTGCTGCTCAAG...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCGGTCAGCCGGGCACTaGAGGTCAGCTCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRSAGH*RSAHLW
Trigger: CCAAAGATGAGCTGACCTGCAGTGCCCGGCTGACCG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGAGCCCAGCACCTGGTaGTGCACTGTGTACGTCAGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMEPSTW*CTVYVR
Trigger: CCTGACGTACACAGTGCAGCACCAGGTGCTGGGCTC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCCAGGTTCTGGGCGGTaGAGGTGTAGACGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMPGSGR*RCRRLH
Trigger: ATGGAGGCGTCTACACCTGCACCGCCCAGAACCTGG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGGTCTCAGCCGGTCCTaGACCAACACTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPGLSRS*TNTLMR
Trigger: CCTCATCAAAGTGTTGGTGCAGGACCGGCTGAGACC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCATCCGTGCTCACCTCTaGGCCCTTTGCCTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPIRAHL*ALCLSF
Trigger: AAAACTCAGGCAAAGGGCGCAGAGGTGAGCACGGAT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGGTGGCAGAAGGTTCTaGAGACTTAGGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPGGRRF*RLRGTG
Trigger: CCCAGTACCCCTAAGTCTGCAGAACCTTCTGCCACC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGAAGTCTGACTCACTaGGCACGTACTGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGSLTH*ARTGDP
Trigger: TGGGTCACCAGTACGTGCGCAGTGAGTCAGACTTCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGCTCCAGCGTATACGTaGAAGGTGCCCGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMAPAYT*KVPGCL
Trigger: GAGACAGCCGGGCACCTTGCACGTATACGCTGGAGC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGGCCCCTCCATGCCATaGCGTAATCTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSGPSMP*RNLSHS
Trigger: AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTTTGTCAACAGCCCCTaGTCCTTGGGCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLFVNSP*SLGPSM
Trigger: CATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAA...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCGGCGTGGGGCTTCGCTaGCCAGTTGAGGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPAGVGLR*PVEAEG
Trigger: ACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCC...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCTGGGCAGGGCGGCGTaGGGCTTCGCTGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRLGRAA*GFAGQL
Trigger: CAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCCAG...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTAGGGCCCGGACGACTTaGACTTCTTCCCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRARTT*TSSLAS
Trigger: AGAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTTCTTCTCCAAGGTCTaGGGTACAGCAGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSFFSKV*GTAAPS
Trigger: GGAGGGCGCTGCTGTACCCCAGACCTTGGAGAAGAA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCAGCACATCTGCCCCTaGTGCCACCACCACATTCTG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSQHICP*CHHHIL
Trigger: CAGAATGTGGTGGTGGCACCAGGGGCAGATGTGCTG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTCTCTGGGAACTCCTCTaGGGGGCTCAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSLWELL*GAQVFL
Trigger: GAGGAATACCTGAGCCCCCCAGAGGAGTTCCCAGAG...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGAAGAACGGCGGTTCTaGCTGGGACTGGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSEERRF*LGLGFM
Trigger: CATGAAGCCCAGTCCCAGCCAGAACCGCCGTTCTTC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGAGGAGACCACAGGCTTaGGCTCCCCCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQRRPQA*APPARG
Trigger: TCCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCT...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTATGCGGTGGCCATTGTaGAACCAGCTGATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSMRWPL*NQLMVG
Trigger: CCCCACCATCAGCTGGTTCCACAATGGCCACCGCAT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGCCATCTGGAGGGCCTaGGACCACATCTGTGACATA +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPAIWRA*DHICDI
Trigger: TATGTCACAGATGTGGTCCCAGGCCCTCCAGATGGC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCACATACACGATGTCTaGTTTGTCCAGCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVHIHDV*FVQHGR
Trigger: CCTGCCATGCTGGACAAACCAGACATCGTGTATGTG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTGGTCATCATCTGGCTaGCTCAGCTCGTACACACCG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGWSSSG*LSSYTP
Trigger: CGGTGTGTACGAGCTGAGCCAGCCAGATGATGACCA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCTCAGGTGTGCCATACTaGCAGTACTGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSGVPY*QYWGSP
Trigger: AGGAGAGCCCCAGTACTGCCAGTATGGCACACCTGA...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTTCTGGCCTGGGCTCTaGAGCCTTGTCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMFWPGL*SLVLGR
Trigger: CCTGCCCAAGACAAGGCTCCAGAGCCCAGGCCAGAA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGACTCCTCCTGGACGCTaGCAGAGAGGTTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMTPPGR*QRGLVA
Trigger: CGCCACCAAACCTCTCTGCCAGCGTCCAGGAGGAGT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTGCCCAGTACGTTGGTaGCCGAGCACTCATAGAGAC +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGCPVRW*PSTHRD
Trigger: GTCTCTATGAGTGCTCGGCCACCAACGTACTGGGCA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCACAGTCACGCCAACTaGCAGGTGGGTCACGTTGTA +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPHSHAN*QVGHVV
Trigger: TACAACGTGACCCACCTGCCAGTTGGCGTGACTGTG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGTGACAGGGGCCTCTTaGTGGGCAGCAGATGGCACA +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMVTGAS*WAADGT
Trigger: TGTGCCATCTGCTGCCCACCAAGAGGCCCCTGTCAC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCTGCACCATGTAAGTaGCCACGTCATCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAAPCK*PRHPQN
Trigger: ATTCTGAGGATGACGTGGCCACTTACATGGTGCAGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGTATTGGGGTACAGCTaGAAGGCATCAAAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPVLGYS*KASKRP
Trigger: GGGCCGCTTTGATGCCTTCCAGCTGTACCCCAATAC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTTGAAGCCCGAGGCCTaGCTGTGGTCCGTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLKPEA*LWSVPL
Trigger: TAGAGGCACGGACCACAGCCAGGCCTCGGGCTTCAA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp ACCCAGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTAAGTGTGGGGGTGAGTaGGAGGGTTCCACATCTCAT +
Preference number: 4 (lower is better)
Translates to: TQSMQGCASEPPSLLLGPKCGGE*EGSTSH
Trigger: ATGAGATGTGGAACCCTCCCACTCACCCCCACACTT...AGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCATCAGCACAGAGCCTaGGGCCTCTGGCTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLHQHRA*GLWLLV
Trigger: GACCAAAAGCCAGAGGCCCCAGGCTCTGTGCTGATG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCCTCCTGCACCAAACTTaGTTAACTCCCTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPLLHQT*LTPSFP
Trigger: TGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAG...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACTGTAGACCCACCTGTTaGCCACAGCCCTACAGCTTG +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDCRPTC*PQPYSL
Trigger: CAAGCTGTAGGGCTGTGGCCAACAGGTGGGTCTACA...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396686.5
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAATGCATCTTGCATTTaGGCAGTGCAGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPNASCI*AVQAAA
Trigger: TGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTTTCGATGCTGCTACTaGGACTGCTGCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMFRCCY*DCCLAW
Trigger: CCAGGCCAGGCAGCAGTCTCAGTAGCAGCATCGAAA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTCGAGGCATCCTTCCCTaGCTGTCACAGACACACAGA +
Preference number: 4 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSRGILP*LSQTHR
Trigger: TCTGTGTGTCTGTGACAGTCAGGGAAGGATGCCTCG...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGGAGGCGGCCCTCGCTaGGCAGCGCTGACCCATCCT +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALGGGPR*AALTHP
Trigger: AGGATGGGTCAGCGCTGCGCAGCGAGGGCCGCCTCC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCATGCACAGCCAACTCTaGTTTGCAGGAGACCTCACC +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPMHSQL*FAGDLT
Trigger: GGTGAGGTCTCCTGCAAAGCAGAGTTGGCTGTGCAT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCAGCTACGCTCCACTATaGGCCGCAAGTAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGSYAPL*AASRRK
Trigger: CTTTCTCCTACTTGCGGCGCATAGTGGAGCGTAGCT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGCTTCAGGTGATCCGTaGTCACCTCTGCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMASGDP*SPLRPL
Trigger: CAAAGGGCGCAGAGGTGAGCACGGATCACCTGAAGC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGGCGATGTCTTGGGGGTaGAGGGCCGAGAGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQAMSWG*RAERRA
Trigger: CGCTCTTCTCTCGGCCCTCCACCCCCAAGACATCGC...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACACAGCACATCTGCCCCTaGTGCCACCACCACATTCTG +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTQHICP*CHHHIL
Trigger: CAGAATGTGGTGGTGGCACCAGGGGCAGATGTGCTG...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGGGCCCAGCTCGTTGGTaGCGGTGGCCATATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQGPARW*RWPYSS
Trigger: GGAGCTATATGGCCACCGCCACCAACGAGCTGGGCC...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGGCACAGGTGGCCTaGCCCAGCTCGTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALAAQVA*PSSLVA
Trigger: CGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCGC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACCCTTCTCTTACTGACTaGTCCATAAGTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHPSLTD*SISETL
Trigger: CAAGGTCTCACTTATGGACCAGTCAGTAAGAGAAGG...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCCCTTCTCTTACTGACTaGTCCATAAGTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: NTARSERCLRQGRGSEGSPSLTD*SISETL
Trigger: CAAGGTCTCACTTATGGACCAGTCAGTAAGAGAAGG...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCCTCATGATGACATCTTaGCCTTCTCTTACTGACTGG +
Preference number: 4 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPLMMTS*PSLTDW
Trigger: CCAGTCAGTAAGAGAAGGCCAAGATGTCATCATGAG...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCTGGCTCCTCGGGAATaGATGGCATCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSLAPRE*MASSPA
Trigger: AGCTGGAGAAGATGCCATCCATTCCCGAGGAGCCAG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCTCCTCCAGACGACCTaGGCCTCCACATGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSLLQTT*ASTWLN
Trigger: ATTCAACCATGTGGAGGCCCAGGTCGTCTGGAGGAG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCGCTCTGGGATGTATTaGGGTACAGCTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPRSGMY*GTAGRH
Trigger: ATGCCTTCCAGCTGTACCCCAATACATCCCAGAGCG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTAAGAGGGTGGCGCTCTaGGATGTATTGGGGTACAGC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSKRVAL*DVLGYS
Trigger: GCTGTACCCCAATACATCCCAGAGCGCCACCCTCTT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTAATGTCCCGTGGCATTaGTGGGAACCCCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPNVPWH*WEPQLK
Trigger: CTTCAACTGGGGTTCCCACCAATGCCACGGGACATT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTCATGCCCACCTTCCTTaGTTCTCCCTGAGATGCACT +
Preference number: 4 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPHAHLP*FSLRCT
Trigger: AGTGCATCTCAGGGAGAACCAAGGAAGGTGGGCATG...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCATGGTCAGGACAACATaGGCAGTAGGGATCGGATGG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPMVRTT*AVGIGW
Trigger: CCATCCGATCCCTACTGCCCATGTTGTCCTGACCAT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTAGACAGCTGGATGGCTaGGAGGGATGGTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSRQLDG*EGWSGQ
Trigger: TTGTCCTGACCATCCCTCCCAGCCATCCAGCTGTCT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTCTCTGGGTTCCACATCTCATaGGCTGTCTTCAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: SPCRGVLVSRPPFCWVLSGFHIS*AVFRNS
Trigger: CGAGTTCCTGAAGACAGCCCATGAGATGTGGAACCC...AGAGAGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR TCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGAGCACCATACTCATTaGCCGCTTTGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPEHHTH*PLCKCR
Trigger: TCTACACTTGCAAAGCGGTCAATGAGTATGGTGCTC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGAATCTTGAGTACCCCTaGCAAAGACCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWNLEYP*QRPSQK
Trigger: CTTCTGAGAAGGTCTTTGTCAGGGGTACTCAAGATT...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGCAGGTTGTCTGGCTTaGTGTCTAGGTGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMAGCLA*CLGGAR
Trigger: ACGTGCTCCACCTAGACATCAAGCCAGACAACCTGC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp TCACTTGCTCCTCTGAGGTGCCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGATCCTCAGCCGTCTCTaGGTCGTAACTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLAPLRCLSRRSGVCPGRILSRL*VVTLLS
Trigger: AGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGAT...CCTCCCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR GCA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCTACAAACTCAGGTGTaGCATACTGGCAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPLQTQV*HTGSTG
Trigger: CCCAGTACTGCCAGTATGGCACACCTGAGTTTGTAG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCGGCCCCTCCATGCCATaGCGTAATCTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPAGPSMP*RNLSHS
Trigger: AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCC...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp ACCCAGTCCATGCAGGGGTGTGCTAGTGAGCCGCCCTCCCTTCTGCTGGGTCCTGGAGCGGAAAATGGTTaGCAAAGCATGGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: TQSMQGCASEPPSLLLGPGAENG*QSMAMN
Trigger: GTTCATTGCCATGCTTTGGCAACCATTTTCCGCTCC...AGGACCCAGCAGAAGGGAGGGCGGCTCACTAGCACACCCCTGCATGGACTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR CCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCTCGCTCAGTGGCGTCTaGGGTCGGGATTCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRSLSGV*GRDSAV
Trigger: CACCGCGGAATCCCGACCCCAGACGCCACTGAGCGA...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCCTCGGCCACGCTGCCTaGCGCCCGCAGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALLGHAA*RPQFFL
Trigger: CAGGAAGAACTGCGGGCGCCAGGCAGCGTGGCCGAG...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCCTCTGGGAACTCCTCTaGGGGGCTCAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: APAPNLVNSLIPRQSTPALWELL*GAQVFL
Trigger: GAGGAATACCTGAGCCCCCCAGAGGAGTTCCCAGAG...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGAACGGCGGTTCTGGCTaGGACTGGGCTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQNGGSG*DWASWW
Trigger: CCACCATGAAGCCCAGTCCCAGCCAGAACCGCCGTT...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCAAAGCGCCGCTGGTCTaGGCGCACGGGCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALKAPLV*AHGLAV
Trigger: AACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTT...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTCTTCTACATACAGCTaGGCTGAGCAGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSSTYS*AEQWAW
Trigger: CCAGGCCCACTGCTCAGCCCAGCTGTATGTAGAAGA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGACCTGGGCCTCCACATaGTTGAATGTGACGGTGACG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMTWAST*LNVTVT
Trigger: CGTCACCGTCACATTCAACCATGTGGAGGCCCAGGT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTGTACTGGTCATCATCTaGCTGGCTCAGCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSVLVII*LAQLVH
Trigger: GTGTACGAGCTGAGCCAGCCAGATGATGACCAGTAC...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTCAGGCTCAGGAATGTaGTCTCCTCGAAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSGSGM*SPRRPR
Trigger: ACGTGGCCTTCGAGGAGACCACATTCCTGAGCCTGA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTGCTGCCCAGTACGTTaGTGGCCGAGCACTCATAGA +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMCCPVR*WPSTHR
Trigger: TCTATGAGTGCTCGGCCACCAACGTACTGGGCAGCA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAGTAGAGGAAGACACTaGTTTAACCCCTTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSRGRH*FNPLRS
Trigger: ACTCCTCAAGGGGTTAAACCAGTGTCTTCCTCTACT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCAGTAGGGATCGGATaGAAGGGGAAACTTCATAAA +
Preference number: 4 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAVGIG*KGKLHK
Trigger: TTTATGAAGTTTCCCCTTCCATCCGATCCCTACTGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp GCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCCATACGGTCCACGCACCATaGGTGAGTCGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AMNSFPLGLTWRTGHPVHTVHAP*VSRPKA
Trigger: GGCCTTTGGCCGACTCACCCATGGTGCGTGGACCGT...ATGGACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp TCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTCTGAGGGGTTCCACATCTCATaGGCTGTCTTCAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: SRRWVPCTSLMSSSAVSEGFHIS*AVFRNS
Trigger: CGAGTTCCTGAAGACAGCCCATGAGATGTGGAACCC...CTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp ACAGGGGGCCTGGTCGGGTGGGTGGTAGATAAGTGTGGGGGTGAGTGGGAGGGTTGCAGGAGCGGAAAATaGTTGCCAAAGCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: TGGLVGWVVDKCGGEWEGCRSGK*LPKHGN
Trigger: ATTGCCATGCTTTGGCAACCATTTTCCGCTCCTGCA...ACCCTCCCACTCACCCCCACACTTATCTACCACCCACCCGACCAGGCCCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR TCA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACGAGCACCATACTCATTaGCCGCTTTGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PVAAVAHALARCSPSGRDEHHTH*PLCKCR
Trigger: TCTACACTTGCAAAGCGGTCAATGAGTATGGTGCTC...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTGTCATAAAAGTCGCTaGGTCTCCTTCCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGCHKSR*VSFLDG
Trigger: ACCATCGAGGAAGGAGACTCAGCGACTTTTATGACA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGCTTTTGGTCTTTTGTaGAATAGAAAGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHAFGLL*NRKCCA
Trigger: GGCACAACACTTTCTATTTCACAAAAGACCAAAAGC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCGCTCCTCGAAGAACTaGAGCTTGTCCAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQRSSKN*SLSRMR
Trigger: CCGCATCCTGGACAAGCTGCAGTTCTTCGAGGAGCG...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGCTGACCCATCCTTGTaGCAGGACACTTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRADPSL*QDTWGG
Trigger: CCCGCCCCAAGTGTCCTGGCACAAGGATGGGTCAGC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGGCTTGGGCTCCCCCTaGACGCGGATGCTCATGATG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRGLGSP*TRMLMM
Trigger: CATCATGAGCATCCGCGTGCAGGGGGAGCCCAAGCC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTTGCGGCCATCGAAATaGATCTTGCATTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPLRPSK*ILHLSS
Trigger: ACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGAGGGCCCGGACGACTTaGACTTCTTCCCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQRARTT*TSSLAS
Trigger: AGAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCT...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCAGGAGACCACAGGCTTaGGCTCCCCCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALRRPQA*APPARG
Trigger: TCCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCT...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTCTCACTCTCCTCCATaGGGCAGCCAAAATGAGTCC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSHSPP*GSQNES
Trigger: GGACTCATTTTGGCTGCCCCATGGAGGAGAGTGAGA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTTCGCAAGAAGAGGGTaGCGCTCTGGGATGTATTGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMFARRG*RSGMYW
Trigger: CCAATACATCCCAGAGCGCCACCCTCTTCTTGCGAA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGTGTGAGTGACTGCTaGCCTCCAGCTCTCCACATT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSVSDC*PPALHI
Trigger: AATGTGGAGAGCTGGAGGCCAGCAGTCACTCACACT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCAGCCGTCTCTGAATGGCCGGTTTTCTaGAAACGCTTCTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: SSRRWVPCTSLMSSSAVSEWPVF*KRFFTH
Trigger: GTGGGTGAAGAAGCGTTTCCAGAAAACCGGCCATTC...AGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGGAGGGGGCCCCAAATaGGCCCTAAACCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALGGGPK*ALNLPG
Trigger: CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGCTCCTGCACCAAACTTaGTTAACTCCCTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRLLHQT*LTPSFP
Trigger: TGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAG...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCCTTTGCCTGAGTTTTaGACCAAGGATGTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSPLPEF*TKDVLG
Trigger: CCCTAGAACATCCTTGGTTCAAAACTCAGGCAAAGG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR TCA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGGCTTTTGGTCTTTTGTaGAATAGAAAGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSPDREGGGPKWALNLPGAFGLL*NRKCCA
Trigger: GGCACAACACTTTCTATTTCACAAAAGACCAAAAGC...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCCATAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCC +
Preference number: 4 (lower is better)
Translates to: AMNSFPLGLTWRTGHPVHRRWVP*TSLMSS
Trigger: GGATGACATCAGCGATGTGCAGGGAACCCAGCGCCT...ATGGACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCAGATTAGCTCGAGATaGCCGCACCAGCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRQISSR*PHQRLH
Trigger: GTGGAGCCGCTGGTGCGGGCATCTCGAGCTAATCTG...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCCATGCACTCGCCCGGTaGTCCCCTTCAGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALHALAR*SPSGRD
Trigger: GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATG...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCAGCAGCAGTAGCACATaGACTCGCCCGGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALSSSST*TRPVLP
Trigger: GGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCT...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGCCTTCTCTTACTGACTaGTCCATAAGTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRPSLTD*SISETL
Trigger: CAAGGTCTCACTTATGGACCAGTCAGTAAGAGAAGG...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGCTCATGATGACATCTTaGCCTTCTCTTACTGACTGG +
Preference number: 4 (lower is better)
Translates to: RQACSSSSTCTRPVLPFRLMMTS*PSLTDW
Trigger: CCAGTCAGTAAGAGAAGGCCAAGATGTCATCATGAG...CCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGATCCGAAGACAGTACTaGTCATCATCTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMIRRQY*SSSGWL
Trigger: GAGCCAGCCAGATGATGACCAGTACTGTCTTCGGAT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACAGAATGGCCGGTTTTCTaGAAACGCTTCTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTEWPVF*KRFFTH
Trigger: GTGGGTGAAGAAGCGTTTCCAGAAAACCGGCCATTC...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp ACTTCGTGGTTGCCAAAGCATGGCAATGAACTCCTTCCCATTAGGCCTCACATGGGGGGCCTGGTCGGGTaGGTGGTAGATAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TSWLPKHGNELLPIRPHMGGLVG*VVDKCG
Trigger: CCCACACTTATCTACCACCCACCCGACCAGGCCCCC...CATGTGAGGCCTAATGGGAAGGAGTTCATTGCCATGCTTTGGCAACCACGAAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000403148.6
CDS-3UTR CCA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCTCCTGCACCAAACTTaGTTAACTCCCTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLLLHQT*LTPSFP
Trigger: TGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGGCCACCACCACATTCTaGAGGGGGATCTCAAACACA +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQATTTF*RGISNT
Trigger: TGTGTTTGAGATCCCCCTGCAGAATGTGGTGGTGGC...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCACATCTGCCCCTGGTaGCACCACCACATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRHICPW*HHHILQ
Trigger: CTGCAGAATGTGGTGGTGGCACCAGGGGCAGATGTG...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCAAGCGGGCCTCGCACTaGCGAGCACCATACTCATTG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRKRASH*RAPYSL
Trigger: CAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTT...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGTAGCAGCTTGCATTTaGGGCCATCGAAATGCATCT +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMVAACI*GHRNAS
Trigger: AGATGCATTTCGATGGCCGCAAATGCAAGCTGCTAC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGATTGACAATCTCGGGTaGTACAAACTCAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMIDNLG*YKLRCA
Trigger: GGCACACCTGAGTTTGTAGCACCCGAGATTGTCAAT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR GCA 90 bp GGCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCCATCTTCAGGAACTCGATaGCTCACAGAGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: GNELLPIRPHMENRAPSPSSGTR*LTEGQG
Trigger: TCCCTGTCCCTCTGTGAGGCATCGAGTTCCTGAAGA...TGGACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR GCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCTTTGTCAACAGCCCCTaGTCCTTGGGCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRFVNSP*SLGPSM
Trigger: CATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAA...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GGTTGCCAAAGCATGGCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAAAGGCCCGGCGGGAATaGCCGGTTTTCTGGAAACGC +
Preference number: 4 (lower is better)
Translates to: GCQSMAMNSFPLGLTWRTKARRE*PVFWKR
Trigger: GCGTTTCCAGAAAACCGGCCATTCCCGCCGGGCCTT...TGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGCCATGCTTTGGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCCATCTGTGGGCCTCCTaGCCTGCACAGCCATGTGTC +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALHLWAS*PAQPCV
Trigger: GACACATGGCTGTGCAGGCCAGGAGGCCCACAGATG...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCATCAGCACAGAGCCTaGGGCCTCTGGCTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRHQHRA*GLWLLV
Trigger: GACCAAAAGCCAGAGGCCCCAGGCTCTGTGCTGATG...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp GGTTGCCAAAGCATGGCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCC +
Preference number: 4 (lower is better)
Translates to: GCQSMAMNSFPLGLTWRTRRWVP*TSLMSS
Trigger: GGATGACATCAGCGATGTGCAGGGAACCCAGCGCCT...TGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGCCATGCTTTGGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR GCA 90 bp GCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCCATTCTTCAGGAACTCGATaGCTCACAGAGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: AMNSFPLGLTWRTGHPVHSSGTR*LTEGQG
Trigger: TCCCTGTCCCTCTGTGAGGCATCGAGTTCCTGAAGA...ATGGACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR GCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCTTTGTCAACAGCCCCTaGTCCTTGGGCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALFVNSP*SLGPSM
Trigger: CATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAA...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp TCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCCTCACGTAACTTTGCTTTCTaGAGGAGCGGAAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: SSRSSRRWVPCTSLMSSSRNFAF*RSGKWL
Trigger: CAACCATTTTCCGCTCCTGCAGAAAGCAAAGTTACG...TGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS-3UTR CCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGAAGAACGGCGGTTCTaGCTGGGACTGGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALEERRF*LGLGFM
Trigger: CATGAAGCCCAGTCCCAGCCAGAACCGCCGTTCTTC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCCTTCTCTTACTGACTaGTCCATAAGTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMPSLTD*SISETL
Trigger: CAAGGTCTCACTTATGGACCAGTCAGTAAGAGAAGG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCTCATGATGACATCTTaGCCTTCTCTTACTGACTGG +
Preference number: 4 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLMMTS*PSLTDW
Trigger: CCAGTCAGTAAGAGAAGGCCAAGATGTCATCATGAG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CCA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACACTCATGATGACATCTTaGCCTTCTCTTACTGACTGG +
Preference number: 4 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTLMMTS*PSLTDW
Trigger: CCAGTCAGTAAGAGAAGGCCAAGATGTCATCATGAG...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCT +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALFPAHR*CHPQPS
Trigger: AGACGGCTGAGGATGACATCAGCGATGTGCAGGGAA...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CCA 90 bp GCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCCATGAATGGCCGGTTTTCTaGAAACGCTTCTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: AMNSFPLGLTWRTGHPVHEWPVF*KRFFTH
Trigger: GTGGGTGAAGAAGCGTTTCCAGAAAACCGGCCATTC...ATGGACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS-3UTR CCA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCTCATGATGACATCTTaGCCTTCTCTTACTGACTGG +
Preference number: 4 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQLMMTS*PSLTDW
Trigger: CCAGTCAGTAAGAGAAGGCCAAGATGTCATCATGAG...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGAGCACCATACTCATTaGCCGCTTTGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTREHHTH*PLCKCR
Trigger: TCTACACTTGCAAAGCGGTCAATGAGTATGGTGCTC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR GCA 90 bp CATGGCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGGGCACCCAGTCGTAACTTTGCTTTCTaGAGGAGCGGAAAACTTCGT +
Preference number: 4 (lower is better)
Translates to: HGNELLPIRPHMENRAPSRNFAF*RSGKLR
Trigger: ACGAAGTTTTCCGCTCCTGCAGAAAGCAAAGTTACG...ACTGGGTGCCCTGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403148.6
CDS-3UTR TCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGAGCACCATACTCATTaGCCGCTTTGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALEHHTH*PLCKCR
Trigger: TCTACACTTGCAAAGCGGTCAATGAGTATGGTGCTC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp ACTTCGTGGTTGCCAAAGCATGGCAATGAACTCCTTCCCATTAGGCCTCACATGATCCTCAGCCGTCTCTaGGTCGTAACTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSWLPKHGNELLPIRPHMILSRL*VVTLLS
Trigger: AGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGAT...CATGTGAGGCCTAATGGGAAGGAGTTCATTGCCATGCTTTGGCAACCACGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403148.6
CDS-3UTR CCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCCTTCTCTTACTGACTaGTCCATAAGTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRPSLTD*SISETL
Trigger: CAAGGTCTCACTTATGGACCAGTCAGTAAGAGAAGG...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CCA 90 bp GGTTGCCAAAGCATGGCAATGAACTCCTTCCCATTAGGCCTCACATGGAGAACAGAGCGGAAAACTTCGTaGTTGCCAAAGCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: GCQSMAMNSFPLGLTWRTERKTS*LPKHGN
Trigger: ATTGCCATGCTTTGGCAACCACGAAGTTTTCCGCTC...TGTTCTCCATGTGAGGCCTAATGGGAAGGAGTTCATTGCCATGCTTTGGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403148.6
CDS-3UTR GCA 90 bp ACTTCGTGGTTGCCAAAGCATGGCAATGAACTCCTTCCCATTAGGCCTCACATGGGAAAACTTCGTGGTTaGCAAAGCATGGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: TSWLPKHGNELLPIRPHMGKLRG*QSMAMN
Trigger: GTTCATTGCCATGCTTTGGCAACCACGAAGTTTTCC...CATGTGAGGCCTAATGGGAAGGAGTTCATTGCCATGCTTTGGCAACCACGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403148.6
CDS-3UTR TCA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCGCTTTTGGTCTTTTGTaGAATAGAAAGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRAFGLL*NRKCCA
Trigger: GGCACAACACTTTCTATTTCACAAAAGACCAAAAGC...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR TCA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCTTTTGGTCTTTTGTaGAATAGAAAGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALAFGLL*NRKCCA
Trigger: GGCACAACACTTTCTATTTCACAAAAGACCAAAAGC...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS GCA 90 bp CCGCACCAGCGGCTCCACCCCCAGGTGCCGTGGCCCGGCCCCGGTTaGCTGTGCTTGCCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACC +
Preference number: 5 (lower is better)
Translates to: PHQRLHPQVPWPGPG*LCLPWAAREAAGAT
Trigger: GGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCGCTGGTGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS CCA 90 bp GGGCCGGCGCGGGCAGGAGCTGCCCATCCCGGAACCAGCGGAGGCTaGGCTGGGGCGTCCCGCTCACCACCACCCGCAGCCGCACGTCGC +
Preference number: 5 (lower is better)
Translates to: GPARAGAAHPGTSGG*AGASRSPPPAAARR
Trigger: GCGACGTGCGGCTGCGGGTGGTGGTGAGCGGGACGCCCCAGCCCAGCCTCCGCTGGTTCCGGGATGGGCAGCTCCTGCCCGCGCCGGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS CCA 90 bp TCCCAGGCCGGGTGGCGCTGCGCGGGAGGGGTCCGCCGCAGCCGCTaGGACAGTGACAGCGAGAGGCGGCGGACGAGGCCAGGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: SQAGWRCAGGVRRSR*DSDSERRRTRPGSP
Trigger: CGGAGAGCCTGGCCTCGTCCGCCGCCTCTCGCTGTCACTGTCCCAGCGGCTGCGGCGGACCCCTCCCGCGCAGCGCCACCCGGCCTGGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp GCGGCGGATGCGGCCCAGCTCCTGGGCGAAGCGCAGCTCGAGGTCTaGGGCCGGGCTGCGCTGACGCGTGCGCTCGTCCAGCGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: AADAAQLLGEAQLEV*GRAALTRALVQRGR
Trigger: GCGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCATCCGCCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 90 bp CCAGGTGCCGTGGCCCGGCCCCGGTTGCCTGTGCTTGCCTTGGGCTaGCCGGGAGGCGGCGGGTGCCACCCCCACTGCCCGCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PGAVARPRLPVLALG*PGGGGCHPHCPLPA
Trigger: AGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp GCGGAAGGCCAAGGCGCCGCAGACTCTCGCCCTCGGACGTGGCCCTaGGAAGCCGTCCGAACAGCGGCGTGCTGCGGCCCGACGCGCCCC +
Preference number: 5 (lower is better)
Translates to: AEGQGAADSRPRTWP*EAVRTAACCGPTRP
Trigger: GGGGCGCGTCGGGCCGCAGCACGCCGCTGTTCGGACGGCTTCGCAGGGCCACGTCCGAGGGCGAGAGTCTGCGGCGCCTTGGCCTTCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp CGGCCCAACGCCGACAGGCGGCCTGAGGCCTCGCTCAGTGGCGTCTaGGGTCGGGATTCCGCGGTGCCCGCCAGGGAGGGCCCGGACGAC +
Preference number: 5 (lower is better)
Translates to: RPNADRRPEASLSGV*GRDSAVPAREGPDD
Trigger: GTCGTCCGGGCCCTCCCTGGCGGGCACCGCGGAATCCCGACCCCAGACGCCACTGAGCGAGGCCTCAGGCCGCCTGTCGGCGTTGGGCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS GCA 90 bp GTGCTTGCCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCACTaGCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTGCCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: VLALGCPGGGGCHPH*PLPAPGPSARCPTS
Trigger: GCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp CCCCGGTTGCCTGTGCTTGCCTTGGGCTGCCCGGGAGGCGGCGGGTaGCACCCCCACTGCCCGCTTCCTGCTCCAGGACCGTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PRLPVLALGCPGGGG*HPHCPLPAPGPSAR
Trigger: GCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp CCACGCTGCCTGGCGCCCGCAGTTCTTCCTGCGAGGCCCCGGGGGTaGCCCACGGTGCGCCGCGCTCCGACTTGGGCTGCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PRCLAPAVLPARPRG*PTVRRAPTWAAPES
Trigger: GCTCTCTGGAGCAGCCCAAGTCGGAGCGCGGCGCACCGTGGGGCACCCCCGGGGCCTCGCAGGAAGAACTGCGGGCGCCAGGCAGCGTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 90 bp GGAGGGCCGAGAGAAGAGCGGGGGCTCGCCGGGCTCTCGAGGGGATaGGGCACGCTGCAGCGTGGCGCGCAGGGACTCGTGCGAGCGCAC +
Preference number: 5 (lower is better)
Translates to: GGPREERGLAGLSRG*GTLQRGAQGLVRAH
Trigger: GTGCGCTCGCACGAGTCCCTGCGCGCCACGCTGCAGCGTGCCCCATCCCCTCGAGAGCCCGGCGAGCCCCCGCTCTTCTCTCGGCCCTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS TCA 90 bp GGCGCGCACCAGCCTAGGCGATCGGCCCAACGCCGACAGGCGGCCTaGGGCCTCGCTCAGTGGCGTCTGGGGTCGGGATTCCGCGGTGCC +
Preference number: 5 (lower is better)
Translates to: GAHQPRRSAQRRQAA*GLAQWRLGSGFRGA
Trigger: GGCACCGCGGAATCCCGACCCCAGACGCCACTGAGCGAGGCCTCAGGCCGCCTGTCGGCGTTGGGCCGATCGCCTAGGCTGGTGCGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS TCA 90 bp GACGAGGCCAGGCTCTCCGACAGCCCTGAGGTCCTGCACCGAGCGTaGGCGCTCAGGCCGTCGCACCAGCTCCAGCGGGGTCCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: DEARLSDSPEVLHRA*ALRPSHQLQRGPRR
Trigger: CCGGCGGGGACCCCGCTGGAGCTGGTGCGACGGCCTGAGCGCTCACGCTCGGTGCAGGACCTCAGGGCTGTCGGAGAGCCTGGCCTCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp TGGGCTGGGGCGTCCCGCTCACCACCACCCGCAGCCGCACGTCGCTaGCCGCGCACACCGCCGCGTTCTTCAGGGGCCGCAGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: WAGASRSPPPAAARR*PRTPPRSSGAAGRL
Trigger: CAGTCTTCCTGCGGCCCCTGAAGAACGCGGCGGTGTGCGCGGGCAGCGACGTGCGGCTGCGGGTGGTGGTGAGCGGGACGCCCCAGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS GCA 90 bp TGCGCAGGGGCACCCAGGGCCGCAGGGGCGCCGGCGGCGAGTCGCTaGGCTCCAGGCTGCGCCGTCGCTCCTCGAAGAACTGCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: CAGAPRAAGAPAASR*APGCAVAPRRTAAC
Trigger: ACAAGCTGCAGTTCTTCGAGGAGCGACGGCGCAGCCTGGAGCGCAGCGACTCGCCGCCGGCGCCCCTGCGGCCCTGGGTGCCCCTGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000498378.5
CDS GCA 90 bp TCTCGAGGGGATGGGGCACGCTGCAGCGTGGCGCGCAGGGACTCGTaGGAGCGCACCAGCTCCTCCCGCGACGTGGAGCGGCGGATGCGG +
Preference number: 5 (lower is better)
Translates to: SRGDGARCSVARRDS*ERTSSSRDVERRMR
Trigger: CCGCATCCGCCGCTCCACGTCGCGGGAGGAGCTGGTGCGCTCGCACGAGTCCCTGCGCGCCACGCTGCAGCGTGCCCCATCCCCTCGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 90 bp TCGGCGGAAGGCGTGGTGGCGCCGGCCTGGGCGGCCAACTGGTTGTaGGGAAGGCCAAGGCGCCGCAGACTCTCGCCCTCGGACGTGGCC +
Preference number: 5 (lower is better)
Translates to: SAEGVVAPAWAANWL*GRPRRRRLSPSDVA
Trigger: GGCCACGTCCGAGGGCGAGAGTCTGCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCCTTCCGCCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp AGCACTGTGAGCACCGCCTCGCAGGAGGCCCGGCCCCGCTCGTTCTaGGCCATGCAGCTGTACACGCCGGCGTCCTGCGCCCCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: STVSTASQEARPRSF*AMQLYTPASCAPQR
Trigger: GCGCTGCGGGGCGCAGGACGCCGGCGTGTACAGCTGCATGGCCCAGAACGAGCGGGGCCGGGCCTCCTGCGAGGCGGTGCTCACAGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS CCA 90 bp TGGCGCGCAGGGACTCGTGCGAGCGCACCAGCTCCTCCCGCGACGTaGAGCGGCGGATGCGGCCCAGCTCCTGGGCGAAGCGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: WRAGTRASAPAPPAT*SGGCGPAPGRSAAR
Trigger: TCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCATCCGCCGCTCCACGTCGCGGGAGGAGCTGGTGCGCTCGCACGAGTCCCTGCGCGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 90 bp GCCTCGGAGCCCAGGGACTCGGCGGAAGGCGTGGTGGCGCCGGCCTaGGCGGCCAACTGGTTGTGCGGAAGGCCAAGGCGCCGCAGACTC +
Preference number: 5 (lower is better)
Translates to: ASEPRDSAEGVVAPA*AANWLCGRPRRRRL
Trigger: GAGTCTGCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCCTTCCGCCGAGTCCCTGGGCTCCGAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS-3UTR CAA 90 bp GCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCTGCCCGGGAGGCTCTGAGGGACGCTGCTaGGGCTGCCCGGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: APPCATRSEGRCLGCPGGSEGRC*GCPGGG
Trigger: GCCGCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGA...GCCTCCCGGGCAGCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS TCA 90 bp CGCTGCTGCCACTGCGCTGCAATCGGCTGGACAGCCGCTCCAGGGTaGAGCTCAGCCGCCTGCGCATCGCCAGCACCGGGGAGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: RCCHCAAIGWTAAPG*SSAACASPAPGSPA
Trigger: CGCGGGGCTCCCCGGTGCTGGCGATGCGCAGGCGGCTGAGCTTCACCCTGGAGCGGCTGTCCAGCCGATTGCAGCGCAGTGGCAGCAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GGGCGAAGCGCAGCTCGAGGTCTGAGGCCGGGCTGCGCTGACGCGTaGGCTCGTCCAGCGAGGCCGCTTTCTGCTGGAACAGGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: GRSAARGLRPGCADA*ARPARPLSAGTGGA
Trigger: GGCGCCGCCTGTTCCAGCAGAAAGCGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 90 bp ACTCGTGCGAGCGCACCAGCTCCTCCCGCGACGTGGAGCGGCGGATaGGGCCCAGCTCCTGGGCGAAGCGCAGCTCGAGGTCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: TRASAPAPPATWSGG*GPAPGRSAARGLRP
Trigger: CGGCCTCAGACCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCATCCGCCGCTCCACGTCGCGGGAGGAGCTGGTGCGCTCGCACGAGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 90 bp GAGAGGCGGCGGACGAGGCCAGGCTCTCCGACAGCCCTGAGGTCCTaGACCGAGCGTGAGCGCTCAGGCCGTCGCACCAGCTCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: ERRRTRPGSPTALRS*TERERSGRRTSSSG
Trigger: CCCGCTGGAGCTGGTGCGACGGCCTGAGCGCTCACGCTCGGTGCAGGACCTCAGGGCTGTCGGAGAGCCTGGCCTCGTCCGCCGCCTCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp GGTTGTGCGGAAGGCCAAGGCGCCGCAGACTCTCGCCCTCGGACGTaGCCCTGCGAAGCCGTCCGAACAGCGGCGTGCTGCGGCCCGACG +
Preference number: 5 (lower is better)
Translates to: GCAEGQGAADSRPRT*PCEAVRTAACCGPT
Trigger: CGTCGGGCCGCAGCACGCCGCTGTTCGGACGGCTTCGCAGGGCCACGTCCGAGGGCGAGAGTCTGCGGCGCCTTGGCCTTCCGCACAACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp AGGGACTCGGCGGAAGGCGTGGTGGCGCCGGCCTGGGCGGCCAACTaGTTGTGCGGAAGGCCAAGGCGCCGCAGACTCTCGCCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: RDSAEGVVAPAWAAN*LCGRPRRRRLSPSD
Trigger: GTCCGAGGGCGAGAGTCTGCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCCTTCCGCCGAGTCCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp CAGAGCCCAGGAGTTGCGGCAGCTCCCCGCAGGCCGGCCCTGCCCTaGCTTCACCCCCAGGCTCCTGCGACCTCGCCCAGCTTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: QSPGVAAAPRRPALP*LHPQAPATSPSFFP
Trigger: GGGGAAGAAGCTGGGCGAGGTCGCAGGAGCCTGGGGGTGAAGTCAGGGCAGGGCCGGCCTGCGGGGAGCTGCCGCAACTCCTGGGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS GCA 90 bp GGCCCAGCTCCTGGGCGAAGCGCAGCTCGAGGTCTGAGGCCGGGCTaGGCTGACGCGTGCGCTCGTCCAGCGAGGCCGCTTTCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GPAPGRSAARGLRPG*ADACARPARPLSAG
Trigger: TCCAGCAGAAAGCGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 90 bp CGGCGGGTGCCACCCCCACTGCCCGCTTCCTGCTCCAGGACCGTCTaGCCGCTGCCCCACCAGCTCACTTGCTCCTCTGAGGTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: RRVPPPLPASCSRTV*PLPHQLTCSSEVPV
Trigger: CACGGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCACCCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451076.1
CDS CCA 90 bp ATTAGCTCGAGATGCCCGCACCAGCGGCTCCACCCCCAGGTGCCGTaGCCCGGCCCCGGTTGCCTGTGCTTGCCTTGGGCTGCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: ISSRCPHQRLHPQVP*PGPGCLCLPWAARE
Trigger: CTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCGCTGGTGCGGGCATCTCGAGCTAAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS TCA 90 bp GTGACAGCGAGAGGCGGCGGACGAGGCCAGGCTCTCCGACAGCCCTaGGGTCCTGCACCGAGCGTGAGCGCTCAGGCCGTCGCACCAGCT +
Preference number: 5 (lower is better)
Translates to: VTARGGGRGQALRQP*GPAPSVSAQAVAPA
Trigger: AGCTGGTGCGACGGCCTGAGCGCTCACGCTCGGTGCAGGACCTCAGGGCTGTCGGAGAGCCTGGCCTCGTCCGCCGCCTCTCGCTGTCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp ACCAGATTAGCTCGAGATGCCCGCACCAGCGGCTCCACCCCCAGGTaGCGTGGCCCGGCCCCGGTTGCCTGTGCTTGCCTTGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TRLARDARTSGSTPR*RGPAPVACACLGLP
Trigger: GGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCGCTGGTGCGGGCATCTCGAGCTAATCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp GGCCTGAGGCCTCGCTCAGTGGCGTCTGGGGTCGGGATTCCGCGGTaGCCGCCAGGGAGGGCCCGGACGACTTGGACTTCTTCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: GLRPRSVASGVGIPR*PPGRARTTWTSSLA
Trigger: AGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTCCCTGGCGGGCACCGCGGAATCCCGACCCCAGACGCCACTGAGCGAGGCCTCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS GCA 90 bp GGCGAGTCGCTGCGCTCCAGGCTGCGCCGTCGCTCCTCGAAGAACTaGAGCTTGTCCAGGATGCGGGAGCCGGCGCGCACCAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: GESLRSRLRRRSSKN*SLSRMREPARTSLG
Trigger: GCCTAGGCTGGTGCGCGCCGGCTCCCGCATCCTGGACAAGCTGCAGTTCTTCGAGGAGCGACGGCGCAGCCTGGAGCGCAGCGACTCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000498378.5
CDS GCA 90 bp TGCCACCCCCACTGCCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTaGCCCACCAGCTCACTTGCTCCTCTGAGGTGCCCGTGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: CHPHCPLPAPGPSAR*PTSSLAPLRCPWGC
Trigger: GCACCCCCACGGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451076.1
CDS CCA 90 bp CGCAGCCGGCACAGCCCACCCTCAGCCTCCTCCGCAAAGCGCCGCTaGTCTGGGCGCACGGGCTGGCGGTTTCTCAGCCAGGAGACCACA +
Preference number: 5 (lower is better)
Translates to: RSRHSPPSASSAKRR*SGRTGWRFLSQETT
Trigger: TGTGGTCTCCTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGAGGAGGCTGAGGGTGGGCTGTGCCGGCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS CCA 90 bp GCTGCAGCAGGCGGCCACGGCACAGCCAATCCACCTCCACGTCAGTaGGCCCCGCCACCAGGCACTCAAACAGCGCCATCTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: AAAGGHGTANPPPRQ*APPPGTQTAPSPRP
Trigger: GGGCCGGGGAGATGGCGCTGTTTGAGTGCCTGGTGGCGGGGCCCACTGACGTGGAGGTGGATTGGCTGTGCCGTGGCCGCCTGCTGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS-3UTR CAA 90 bp GGGCAGGGCGGCGTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTGGGAGCAGCGCGGATTaGGAAGGAGGCGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GQGGVGLRWPVEAEGRAPGSSAD*EGGGWA
Trigger: TGCCCAGCCGCCTCCTTCCAAATCCGCGCTGCTCCC...AGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCACGCCGCCCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS TCA 90 bp AGCTCCTGGGCGAAGCGCAGCTCGAGGTCTGAGGCCGGGCTGCGCTaGCGCGTGCGCTCGTCCAGCGAGGCCGCTTTCTGCTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: SSWAKRSSRSEAGLR*RVRSSSEAAFCWNR
Trigger: CCTGTTCCAGCAGAAAGCGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGCCCAGGAGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 90 bp CCGGCACAGCCCACCCTCAGCCTCCTCCGCAAAGCGCCGCTGGTCTaGGCGCACGGGCTGGCGGTTTCTCAGCCAGGAGACCACAGGCTT +
Preference number: 5 (lower is better)
Translates to: PAQPTLSLLRKAPLV*AHGLAVSQPGDHRL
Trigger: AAGCCTGTGGTCTCCTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGAGGAGGCTGAGGGTGGGCTGTGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGCGCCGCGCTCCGACTaGGGCTGCTCCAGAGAGCGG +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVAPRSD*GCSRER
Trigger: CCGCTCTCTGGAGCAGCCCAAGTCGGAGCGCGGCGC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGGCGCCGCGCTCCGACTaGGGCTGCTCCAGAGAGCGG +
Preference number: 5 (lower is better)
Translates to: PSPDREGGGPKWALNLPGAPRSD*GCSRER
Trigger: CCGCTCTCTGGAGCAGCCCAAGTCGGAGCGCGGCGC...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCACGGCCCGCGATGTCTaGGGGGTGGAGGGCCGAGAG +
Preference number: 5 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPTARDV*GVEGRE
Trigger: CTCTCGGCCCTCCACCCCCAAGACATCGCGGGCCGT...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp AACACAGCGAGGTCCGAGAGGTGCCTGAGACAGGGGCGCGGCTCGGAGGGTAGCCAGGAGACCACAGGCTaGGGCTCCCCCTGCACGCGG +
Preference number: 5 (lower is better)
Translates to: NTARSERCLRQGRGSEGSQETTG*GSPCTR
Trigger: CCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCTG...GCTACCCTCCGAGCCGCGCCCCTGTCTCAGGCACCTCTCGGACCTCGCTGTGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS TCA 90 bp CTCCAGGACCGTCTGCCCGCTGCCCCACCAGCTCACTTGCTCCTCTaGGGTGCCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: LQDRLPAAPPAHLLL*GACHGGRGCVQGGA
Trigger: GGCACCTCCCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000435853.5
ENST00000452101.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp GGACCGTCTGCCCGCTGCCCCACCAGCTCACTTGCTCCTCTGAGGTaGCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGGTGCCCACCA +
Preference number: 5 (lower is better)
Translates to: GPSARCPTSSLAPLR*LSRRSGVCPGRCPP
Trigger: TGGTGGGCACCTCCCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000435853.5
ENST00000452101.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp TGCCACCCCCACTGCCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTaGCCCACCAGCTCACTTGCTCCTCTGAGGTGCCTGTCACGGAGG +
Preference number: 5 (lower is better)
Translates to: CHPHCPLPAPGPSAR*PTSSLAPLRCLSRR
Trigger: CCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTGGGGGTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000435853.5
ENST00000452101.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp CAGCCCTGTGGCTGCCCACCCTGGCTCCCGCAGGCCTGTGACCAGTaGCGTCCACTGGTCCGAGCCCAGCACCTGGTGCTGCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: QPCGCPPWLPQACDQ*RPLVRAQHLVLHCV
Trigger: TACACAGTGCAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGTCACAGGCCTGCGGGAGCCAGGGTGGGCAGCCACAGGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 90 bp GGGGTCGGGATTCCGCGGTGCCCGCCAGGGAGGGCCCGGACGACTTaGACTTCTTCCCTCGCTTCTCTTCGGTGGTGGTGTCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: GVGIPRCPPGRARTT*TSSLASLRWWCPRA
Trigger: TGCCCGAGGACACCACCACCGAAGAGAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTCCCTGGCGGGCACCGCGGAATCCCGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS CCA 90 bp TCACGGTCAGTGAGGCGGCACAGGTGGCCTGGCCCAGCTCGTTGGTaGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SRSVRRHRWPGPARW*RWPYSSRHLLPWPP
Trigger: GGGAGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCGCCTCACTGACCGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000462545.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 90 bp GCTGCCCACCCTGGCTCCCGCAGGCCTGTGACCAGTGCCGTCCACTaGTCCGAGCCCAGCACCTGGTGCTGCACTGTGTACGTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: AAHPGSRRPVTSAVH*SEPSTWCCTVYVRE
Trigger: CTCCCTGACGTACACAGTGCAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGTCACAGGCCTGCGGGAGCCAGGGTGGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 90 bp CCTGCAGGACCCGCCGCTTGCCCTCGGCAGCATAGGGCACGATCTTaGCCACGAACGTTCGCCCCGTGGCATTCTCCCGGCACGCTCGCA +
Preference number: 5 (lower is better)
Translates to: PAGPAACPRQHRARS*PRTFAPWHSPGTLA
Trigger: TGCGAGCGTGCCGGGAGAATGCCACGGGGCGAACGTTCGTGGCCAAGATCGTGCCCTATGCTGCCGAGGGCAAGCGGCGGGTCCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp GAGCGTCTGGCGGCGCAGCTTCATCAGGTAGGCGTCCTGCAACCATaGGTGGGCCAGGCAGTCCTGCAGGGAGGGCCGGCTCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: ERLAAQLHQVGVLQP*VGQAVLQGGPAPGM
Trigger: CATCCCTGGAGCCGGCCCTCCCTGCAGGACTGCCTGGCCCACCCATGGTTGCAGGACGCCTACCTGATGAAGCTGCGCCGCCAGACGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp CCAGGGCATTCCGGCCAGGCTGGGCCAGACCTGGGCTGCCACATGTaGGAAAGGGGCCCACCTCCTCCAGACGACCTGGGCCTCCACATG +
Preference number: 5 (lower is better)
Translates to: PGHSGQAGPDLGCHM*ERGPPPPDDLGLHM
Trigger: CATGTGGAGGCCCAGGTCGTCTGGAGGAGGTGGGCCCCTTTCCCACATGTGGCAGCCCAGGTCTGGCCCAGCCTGGCCGGAATGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS-3UTR CAA 90 bp GCTGAAGGTCGGGCTCCTCCCTGCGCAACCCGCTCTGAGGGACGCTGCTTGGGCGGCTTCGCTGGCCAGTaGAGGCTGAAGGTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: AEGRAPPCATRSEGRCLGGFAGQ*RLKVGL
Trigger: GAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCC...GCCCAAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452101.1
CDS-3UTR CAA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGGGAGCAGCGCGGATTaGGAAGGAGGCGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHGSSAD*EGGGWA
Trigger: TGCCCAGCCGCCTCCTTCCAAATCCGCGCTGCTCCC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGACGGCCCGCGATGTCTaGGGGGTGGAGGGCCGAGAG +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVTARDV*GVEGRE
Trigger: CTCTCGGCCCTCCACCCCCAAGACATCGCGGGCCGT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTCCACAGACGCCGCCTaGTGCAGGCCCCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPSTDAA*CRPRPS
Trigger: GCTGGGCCGGGGCCTGCACAAGGCGGCGTCTGTGGA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCAGACCGGCGTGCCGCTaGCCCGCCCGGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPRPACR*PARGML
Trigger: CAGCATCCCCCGGGCGGGCAAGCGGCACGCCGGTCT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS GCA 90 bp GCTTCCTGCTCCAGGACCGTCTGCCCGCTGCCCCACCAGCTCACTTaGTCCTCTGAGGTGCCTGTCACGGAGGTCGGGGGTGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASCSRTVCPLPHQLT*SSEVPVTEVGGVSR
Trigger: CCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000435853.5
ENST00000452101.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 90 bp GGTGCCACACAGACTCCCCATCCACTCGCCGCTCCAGCGTATACGTaGAAGGTGCCCGGCTGTCTCCCGGCTTCCACAGCACCAGCGCCG +
Preference number: 5 (lower is better)
Translates to: GATQTPHPLAAPAYT*KVPGCLPASTAPAP
Trigger: CGGCGCTGGTGCTGTGGAAGCCGGGAGACAGCCGGGCACCTTGCACGTATACGCTGGAGCGGCGAGTGGATGGGGAGTCTGTGTGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GGTGCAGGGTCCGCAGCACCTCGTACTCCTGCAGGACCCGCCGCTTaGCCTCGGCAGCATAGGGCACGATCTTGGCCACGAACGTTCGCC +
Preference number: 5 (lower is better)
Translates to: GAGSAAPRTPAGPAA*PRQHRARSWPRTFA
Trigger: GGCGAACGTTCGTGGCCAAGATCGTGCCCTATGCTGCCGAGGGCAAGCGGCGGGTCCTGCAGGAGTACGAGGTGCTGCGGACCCTGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp GTCTCACGGTCAGTGAGGCGGCACAGGTGGCCTGGCCCAGCTCGTTaGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: VSRSVRRHRWPGPAR*WRWPYSSRHLLPWP
Trigger: AGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCGCCTCACTGACCGTGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000462545.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 90 bp GCTGGCCGGGCAGCCTGCAGGCCCCTGTGTCTTCGTGGAGGGGTTTaGGGTGGTGGACCCACAGCCTTGAGCGAGGACAAGGCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: AGRAACRPLCLRGGV*GGGPTALSEDKAWL
Trigger: TAGCCAGGCCTTGTCCTCGCTCAAGGCTGTGGGTCCACCACCCCAAACCCCTCCACGAAGACACAGGGGCCTGCAGGCTGCCCGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGGAGCAGCGCGGATTaGGAAGGAGGCGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGSSAD*EGGGWA
Trigger: TGCCCAGCCGCCTCCTTCCAAATCCGCGCTGCTCCC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCACAGCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCAGGAGACCACAGGCTaGGGCTCCCCCTGCACGCGG +
Preference number: 5 (lower is better)
Translates to: AQPCVHLGREGPQGPMGYQETTG*GSPCTR
Trigger: CCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCTG...ATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCACAGCAGCGTGGGGCTaGGGCTCTGAAGGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPTAAWG*GSEGGA
Trigger: CGCGCCGCCTTCAGAGCCCAAGCCCCACGCTGCTGT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGAGCGCAGCAGCACCTaGTGGCGGGTGGCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWERSST*WRVAAS
Trigger: TGAGGCTGCCACCCGCCACAAGGTGCTGCTGCGCTC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp TCGGGGTCCCAGTGTCAAGGACGAAAGGCTTGGGCTCACTTGGGGTaGCGTGGGTACTGGGTAGGGTGGGCTCCGCTGGCCGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SGSQCQGRKAWAHLG*RGYWVGWAPLAGQP
Trigger: AGGCTGCCCGGCCAGCGGAGCCCACCCTACCCAGTACCCACGTCACCCCAAGTGAGCCCAAGCCTTTCGTCCTTGACACTGGGACCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GCCCTCCAACACCTCCACATCTTCCAGCAGCCGTGTGAACAGGGGTaGCAACGAGGGCCGCACGGTCAGCCGGGCACTGCAGGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ALQHLHIFQQPCEQG*QRGPHGQPGTAGQL
Trigger: GAGCTGACCTGCAGTGCCCGGCTGACCGTGCGGCCCTCGTTGGCACCCCTGTTCACACGGCTGCTGGAAGATGTGGAGGTGTTGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp AGGTTCTGCAGACTTAGGGGTACTGGGTTTGGGGGCGCTGGGCCGTaGAGGGCTGGATGGCTGGGCCTCGCTGAGGGCAGACAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RFCRLRGTGFGGAGP*RAGWLGLAEGRQGR
Trigger: CCTTCCCTGTCTGCCCTCAGCGAGGCCCAGCCATCCAGCCCTGCACGGCCCAGCGCCCCCAAACCCAGTACCCCTAAGTCTGCAGAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp CACAGACTCCCCATCCACTCGCCGCTCCAGCGTATACGTGCAAGGTaGCCGGCTGTCTCCCGGCTTCCACAGCACCAGCGCCGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: HRLPIHSPLQRIRAR*PAVSRLPQHQRRVL
Trigger: CAGGACACGGCGCTGGTGCTGTGGAAGCCGGGAGACAGCCGGGCACCTTGCACGTATACGCTGGAGCGGCGAGTGGATGGGGAGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp CGCACAGGCACGCAGACCTGGCTAGGGCCCTTCTGCATAGAGGGCTaGCTCTCACACCGTCAGGGCAGCACTGCCACTCTTGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RTGTQTWLGPFCIEG*LSHRQGSTATLGSP
Trigger: GGGGGAGCCAAGAGTGGCAGTGCTGCCCTGACGGTGTGAGAGGCAGCCCTCTATGCAGAAGGGCCCTAGCCAGGTCTGCGTGCCTGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CCA 90 bp GGGAGGGCCCGGACGACTTGGACTTCTTCCCTCGCTTCTCTTCGGTaGTGGTGTCCTCGGGCAGCACAGGCTCCTGAGTGCGACGGTGGG +
Preference number: 5 (lower is better)
Translates to: GRARTTWTSSLASLR*WCPRAAQAPECDGG
Trigger: CCCACCGTCGCACTCAGGAGCCTGTGCTGCCCGAGGACACCACCACCGAAGAGAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS CCA 90 bp CGCAGGCCTGTGACCAGTGCCGTCCACTGGTCCGAGCCCAGCACCTaGTGCTGCACTGTGTACGTCAGGGAGTCCGGGTCGATGGCCATG +
Preference number: 5 (lower is better)
Translates to: RRPVTSAVHWSEPST*CCTVYVRESGSMAM
Trigger: CATGGCCATCGACCCGGACTCCCTGACGTACACAGTGCAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGTCACAGGCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 90 bp GCCCCCATGTCCCGGCGGCTCACCCGGCAGATCCGAAGACAGTACTaGTCATCATCTGGCTGGCTCAGCTCGTACACACCGGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: APMSRRLTRQIRRQY*SSSGWLSSYTPARA
Trigger: GGCACGGGCCGGTGTGTACGAGCTGAGCCAGCCAGATGATGACCAGTACTGTCTTCGGATCTGCCGGGTGAGCCGCCGGGACATGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 90 bp GTCCCAGTGTCAAGGACGAAAGGCTTGGGCTCACTTGGGGTGACGTaGGTACTGGGTAGGGTGGGCTCCGCTGGCCGGGCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VPVSRTKGLGSLGVT*VLGRVGSAGRAACR
Trigger: CCTGCAGGCTGCCCGGCCAGCGGAGCCCACCCTACCCAGTACCCACGTCACCCCAAGTGAGCCCAAGCCTTTCGTCCTTGACACTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCCGGTTGCCTGTGCTaGCCTTGGGCTGCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPGCLC*PWAARE
Trigger: CTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTGTAGCAGCAGTAGCACATGCACTCGCCCGGTGCTCCCCTTCAGGGAGAGACCCCGGTTGCCTGTGCTaGCCTTGGGCTGCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PVAAVAHALARCSPSGRDPGCLC*PWAARE
Trigger: CTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGG...GTCTCTCCCTGAAGGGGAGCACCGGGCGAGTGCATGTGCTACTGCTGCTACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCGGGTCAGCGGGAATaGGTCCCGACGCCTAACCTC +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPGQRE*VPTPNL
Trigger: GAGGTTAGGCGTCGGGACCAATTCCCGCTGACCCGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGGGCCTCCTCCAGGGTaGGGCCGTGCTCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPGPPPG*GRAPAA
Trigger: AGCTGCTGGAGCACGGCCCAACCCTGGAGGAGGCCC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCCCTGCCCAGCACGGTaGGCACAGGCCACACGGAAC +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPPCPAR*AQATRN
Trigger: GTTCCGTGTGGCCTGTGCCAACCGTGCTGGGCAGGG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGGTGACAGGGGCCTCTaGGTGGGCAGCAGATGGCAC +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVGDRGL*VGSRWH
Trigger: GTGCCATCTGCTGCCCACCAAGAGGCCCCTGTCACC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCCAGCCATGTGTCCACTaGGGGAGGGAGGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPQPCVH*GREGPQ
Trigger: CTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTG...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CAA 90 bp GCCATGTGTCCACTTGGGGAGGGAGGGTCCACAGGGGCCCATGGGCTATCCCCCCCACAGCCCTACAGCTaGCACCCCCAAACGCTCGAG +
Preference number: 5 (lower is better)
Translates to: AMCPLGEGGSTGAHGLSPPQPYS*HPQTLE
Trigger: CTCGAGCGTTTGGGGGTGCAAGCTGTAGGGCTGTGG...GGGGGATAGCCCATGGGCCCCTGTGGACCCTCCCTCCCCAAGTGGACACATGGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000396686.5
CDS TCA 90 bp GCCGGTCGTCGCTGCTCTGGATGCGGTGGCCATTGTGGAACCAGCTaGTGGTGGGGTAGGGCAGGCCGGTCACCTGGCACTCTAGCATGG +
Preference number: 5 (lower is better)
Translates to: AGRRCSGCGGHCGTS*WWGRAGRSPGTLAW
Trigger: CCATGCTAGAGTGCCAGGTGACCGGCCTGCCCTACCCCACCATCAGCTGGTTCCACAATGGCCACCGCATCCAGAGCAGCGACGACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp GGGCCTCCCGACGCGCTGATGCCTTTGGCTTGGCCTGGCTGGGGATaGACTTGGCCGCAAACTCCAGGCCGGAGCTACGCTCCACTATGC +
Preference number: 5 (lower is better)
Translates to: GPPDALMPLAWPGWG*TWPQTPGRSYAPLC
Trigger: GCATAGTGGAGCGTAGCTCCGGCCTGGAGTTTGCGGCCAAGTTCATCCCCAGCCAGGCCAAGCCAAAGGCATCAGCGCGTCGGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp AGGCCTGTGACCAGTGCCGTCCACTGGTCCGAGCCCAGCACCTGGTaGTGCACTGTGTACGTCAGGGAGTCCGGGTCGATGGCCATGTCC +
Preference number: 5 (lower is better)
Translates to: RPVTSAVHWSEPSTW*CTVYVRESGSMAMS
Trigger: GGACATGGCCATCGACCCGGACTCCCTGACGTACACAGTGCAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGTCACAGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 90 bp GGCTTGCTGCTGCTCTTGACAGTGGTGCTGAGGACCCGGAAGATGTaGTGGACCCCCTTACGCAGCCCTGTGGCTGCCCACCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLLLLLTVVLRTRKM*WTPLRSPVAAHPGS
Trigger: GGAGCCAGGGTGGGCAGCCACAGGGCTGCGTAAGGGGGTCCAGCACATCTTCCGGGTCCTCAGCACCACTGTCAAGAGCAGCAGCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 90 bp GGGTTCCATGTGAGTGTGACCATCCTCCCCGTCACAGCCACCACCTaGGGGGCGCCATCTGGAGGGCCTGGGACCACATCTGAAAGCCGC +
Preference number: 5 (lower is better)
Translates to: GFHVSVTILPVTATT*GAPSGGPGTTSESR
Trigger: GCGGCTTTCAGATGTGGTCCCAGGCCCTCCAGATGGCGCCCCGCAGGTGGTGGCTGTGACGGGGAGGATGGTCACACTCACATGGAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 90 bp GTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTCACTCTCTTCTCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VGLRWPVEAEGRAPP*ATRSEGRSLSSLSC
Trigger: GCAGGAGAGAGAAGAGAGTGAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485813.5
CDS GCA 90 bp GTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTGCTCACTCTCTTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: VGLRWPVEAEGRAPP*ATRSEGRCSLSSLS
Trigger: GGAGAGAGAAGAGAGTGAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491248.1
CDS CCA 90 bp GTGCCTTGGAGCCAGTGTCAGAAGAACGGCGGTTCTGGCTGGGACTaGGCTTCATGGTGGGGGTTCGCGGCCAGGTCTCCCCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VPWSQCQKNGGSGWD*ASWWGFAARSPQAL
Trigger: CAGAGCCTGGGGAGACCTGGCCGCGAACCCCCACCATGAAGCCCAGTCCCAGCCAGAACCGCCGTTCTTCTGACACTGGCTCCAAGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS CCA 90 bp TTGCTGCTGCTCTTGACAGTGGTGCTGAGGACCCGGAAGATGTGCTaGACCCCCTTACGCAGCCCTGTGGCTGCCCACCCTGGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LLLLLTVVLRTRKMC*TPLRSPVAAHPGSR
Trigger: GCGGGAGCCAGGGTGGGCAGCCACAGGGCTGCGTAAGGGGGTCCAGCACATCTTCCGGGTCCTCAGCACCACTGTCAAGAGCAGCAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 90 bp AGGAGGGCCCCTCGGCAGCTCCTCCAGACGACCTGGGCCTCCACATaGTTGAATGTGACGGTGACGCTGGCAGGCTGTCCCTCCACCACA +
Preference number: 5 (lower is better)
Translates to: RRAPRQLLQTTWAST*LNVTVTLAGCPSTT
Trigger: TGTGGTGGAGGGACAGCCTGCCAGCGTCACCGTCACATTCAACCATGTGGAGGCCCAGGTCGTCTGGAGGAGCTGCCGAGGGGCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp CTGAGGCCCCACGGCAGGGAACACCAAGCGATGGACATCCCTGTCTaGGAGGGGAGGGACAGTGACACTGGGCCTGAGCCCGGAGGATAC +
Preference number: 5 (lower is better)
Translates to: LRPHGREHQAMDIPV*EGRDSDTGPEPGGY
Trigger: GTATCCTCCGGGCTCAGGCCCAGTGTCACTGTCCCTCCCCTCCCAGACAGGGATGTCCATCGCTTGGTGTTCCCTGCCGTGGGGCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS-3UTR CAA 90 bp CCCAGCCCTGACAGAGAAGGAGGGGGCCCCAAATGGGCCCTAAACCTGCCAGGGAGCGCTGACCCATCCTaGTGCCAGGACACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: PSPDREGGGPKWALNLPGSADPS*CQDTWG
Trigger: GCCCCAAGTGTCCTGGCACAAGGATGGGTCAGCGCT...CCCTGGCAGGTTTAGGGCCCATTTGGGGCCCCCTCCTTCTCTGTCAGGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp CTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTAGCGCTGACCCATCCTaGTGCCAGGACACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LAQLVGGGGHIAPGICCPSADPS*CQDTWG
Trigger: GCCCCAAGTGTCCTGGCACAAGGATGGGTCAGCGCT...AGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR CAA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTCAGGAGACCACAGGCTaGGGCTCCCCCTGCACGCGG +
Preference number: 5 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSQETTG*GSPCTR
Trigger: CCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCTG...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGGACTCGCGGCTGCGCTaGAACTTGGCCTCGAACACG +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVDSRLR*NLASNT
Trigger: CGTGTTCGAGGCCAAGTTCAAGCGCAGCCGCGAGTC...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCGGTGGCGATAACCCCTaGTCCTTCCGCGGCCGAGAG +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPGGDNP*SFRGRE
Trigger: CTCTCGGCCGCGGAAGGACAAGGGGTTATCGCCACC...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCTGCACAGTCACCTaGGTAGGCTCAGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWLCTVT*VGSGGG
Trigger: GCCCCCTCCTGAGCCTACCAAGGTGACTGTGCAGAG...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGTCTCCCACTCTGGCTTaGGCCTGGGGTGGCATCAGG +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSPTLA*AWGGIR
Trigger: CCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGA...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGCAGTGGGGACATCCTaGGGCCAGCAGAGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGAVGTS*GQQSAQ
Trigger: CTGGGCGCTCTGCTGGCCCAAGGATGTCCCCACTGC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp CGCATAGAGCCCCTCGTCCTCGCTGCCCACATGGGCAATGTGCAGTaGGTGCAGACCCCCGTCCTGCCGCAGCCGCAAGTTCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: RIEPLVLAAHMGNVQ*VQTPVLPQPQVLTL
Trigger: GAGAGTGAGAACTTGCGGCTGCGGCAGGACGGGGGTCTGCACTCACTGCACATTGCCCATGTGGGCAGCGAGGACGAGGGGCTCTATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp GGACACCCGGGAGCCAGAGAACTCGGGCTGCAGTGGGCGGGGCACTaGGGGCAGCTCTTCCAGCTCTTCCTCTTCAGAATCCGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GHPGARELGLQWAGH*GQLFQLFLFRIRGG
Trigger: TCCTCCTCGGATTCTGAAGAGGAAGAGCTGGAAGAGCTGCCCTCAGTGCCCCGCCCACTGCAGCCCGAGTTCTCTGGCTCCCGGGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp AGGCATGGGCTAGAGCAAGGACGCCCACGGTCCACGCACCATGGGTaGGTCGGCCAAAGGCCCGGCGGGAATGGCCGGTTTTCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: RHGLEQGRPRSTHHG*VGQRPGGNGRFSGN
Trigger: GTTTCCAGAAAACCGGCCATTCCCGCCGGGCCTTTGGCCGACTCACCCATGGTGCGTGGACCGTGGGCGTCCTTGCTCTAGCCCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403148.6
ENST00000420132.5
CDS TCA 90 bp AGCCACCACCTGCGGGGCGCCATCTGGAGGGCCTGGGACCACATCTaGAAGCCGCAGTTCGAATGTCTGCTGGGTCCAAGGGCCCAACAG +
Preference number: 5 (lower is better)
Translates to: SHHLRGAIWRAWDHI*KPQFECLLGPRAQQ
Trigger: CTGTTGGGCCCTTGGACCCAGCAGACATTCGAACTGCGGCTTTCAGATGTGGTCCCAGGCCCTCCAGATGGCGCCCCGCAGGTGGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 90 bp CCTGTGACCAGTGCCGTCCACTGGTCCGAGCCCAGCACCTGGTGCTaGACTGTGTACGTCAGGGAGTCCGGGTCGATGGCCATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PVTSAVHWSEPSTWC*TVYVRESGSMAMSR
Trigger: TCTGGACATGGCCATCGACCCGGACTCCCTGACGTACACAGTGCAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGTCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 90 bp GTGGGAATGTCTGTGAGGGACACCCGGGAGCCAGAGAACTCGGGCTaGAGTGGGCGGGGCACTGAGGGCAGCTCTTCCAGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VGMSVRDTREPENSG*SGRGTEGSSSSSSS
Trigger: AGAGGAAGAGCTGGAAGAGCTGCCCTCAGTGCCCCGCCCACTGCAGCCCGAGTTCTCTGGCTCCCGGGTGTCCCTCACAGACATTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GTGGGGCTTCGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTGTCTCTTCTCTCTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: VGLRWPVEAEGRAPP*ATRSEGRCLFSLLL
Trigger: AAGCAGGAGAGAGAAGAGACAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497065.1
CDS CCA 90 bp GAGCTGGGGCCTGAGGCGGCTGTCCGGGGCTCTTCTACATACAGCTaGGCTGAGCAGTGGGCCTGGCCATGGGTGTTAACAGCACTGACC +
Preference number: 5 (lower is better)
Translates to: ELGPEAAVRGSSTYS*AEQWAWPWVLTALT
Trigger: GGTCAGTGCTGTTAACACCCATGGCCAGGCCCACTGCTCAGCCCAGCTGTATGTAGAAGAGCCCCGGACAGCCGCCTCAGGCCCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp CGGCTCACCCGGCAGATCCGAAGACAGTACTGGTCATCATCTGGCTaGCTCAGCTCGTACACACCGGCCCGTGCCTCTAGGAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RLTRQIRRQYWSSSG*LSSYTPARASRRAP
Trigger: AGGGGCCCTCCTAGAGGCACGGGCCGGTGTGTACGAGCTGAGCCAGCCAGATGATGACCAGTACTGTCTTCGGATCTGCCGGGTGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 90 bp TCTCGAAGGCCTCATGGAAGTAGAGGACACAGTCGTGCTGGAGCCTaGCCAGCAGCCGGGCCTCCCGACGCGCTGATGCCTTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SRRPHGSRGHSRAGA*PAAGPPDALMPLAW
Trigger: CCAAGCCAAAGGCATCAGCGCGTCGGGAGGCCCGGCTGCTGGCCAGGCTCCAGCACGACTGTGTCCTCTACTTCCATGAGGCCTTCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp GCATGCGCACGCACACGCACACATGCACGCACAGGCACGCAGACCTaGCTAGGGCCCTTCTGCATAGAGGGCTGCCTCTCACACCGTCAG +
Preference number: 5 (lower is better)
Translates to: ACARTRTHARTGTQT*LGPFCIEGCLSHRQ
Trigger: CTGACGGTGTGAGAGGCAGCCCTCTATGCAGAAGGGCCCTAGCCAGGTCTGCGTGCCTGTGCGTGCATGTGTGCGTGTGCGTGCGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CCA 90 bp CAGGCTGTCCCTCCACCACATACACGATGTCTGGTTTGTCCAGCATaGCAGGGGCCTCCTCCAGGGTTGGGCCTGGGAGGAGGAGAGCGC +
Preference number: 5 (lower is better)
Translates to: QAVPPPHTRCLVCPA*QGPPPGLGLGGGER
Trigger: GCGCTCTCCTCCTCCCAGGCCCAACCCTGGAGGAGGCCCCTGCCATGCTGGACAAACCAGACATCGTGTATGTGGTGGAGGGACAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CCA 90 bp CCCGCTCTGAGGGACGCTGCTCACTCTCTTCTCTCTCCTGCTTGCTaGCTTGTTCCCCTGCTCTCTCCTGCTCTCCCGGGAGCTGCCGTG +
Preference number: 5 (lower is better)
Translates to: PALRDAAHSLLSPAC*LVPLLSPALPGAAV
Trigger: CACGGCAGCTCCCGGGAGAGCAGGAGAGAGCAGGGGAACAAGCCAGCAAGCAGGAGAGAGAAGAGAGTGAGCAGCGTCCCTCAGAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491248.1
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCAGCGCTGACCCATCCTaGTGCCAGGACACTTGGGGC +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPSADPS*CQDTWG
Trigger: GCCCCAAGTGTCCTGGCACAAGGATGGGTCAGCGCT...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCAGGAGACCACAGGCTaGGGCTCCCCCTGCACGCGG +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMQETTG*GSPCTR
Trigger: CCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCTG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGTCCTGCACCAACACTTaGATGAGGAAGCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVSCTNT*MRKPRA
Trigger: GGCCCGGGGCTTCCTCATCAAAGTGTTGGTGCAGGA...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTTAGGGGTACTGGGTTaGGGGGCGCTGGGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGLGVLG*GALGRA
Trigger: TGCACGGCCCAGCGCCCCCAAACCCAGTACCCCTAA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGGGGTGGTGCAGGCTaGGAGGCTCGGACTGGTTCT +
Preference number: 5 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGGGAG*EARTGS
Trigger: AGAACCAGTCCGAGCCTCCAAGCCTGCACCACCCCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTTGGGCGGCCAACTGGTaGTGCGGAAGGCCAAGGCGC +
Preference number: 5 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSWAANW*CGRPRR
Trigger: GCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCA...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp CCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCTCTGAGTCTCCGACCTCCAGCACTG +
Preference number: 5 (lower is better)
Translates to: PRHPEAPGAGFPAHR*CHPQPSLSLRPPAL
Trigger: CAGTGCTGGAGGTCGGAGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp TTCACACGTCACAGCTGTGCTCACCCTGGCACCCTAGGGTCCCTGTaGTGCTCCAAGCCTAAGCCACCCCAAGGGCCCCTCCGAACGGGT +
Preference number: 5 (lower is better)
Translates to: FTRHSCAHPGTLGSL*CSKPKPPQGPLRTG
Trigger: ACCCGTTCGGAGGGGCCCTTGGGGTGGCTTAGGCTTGGAGCATCACAGGGACCCTAGGGTGCCAGGGTGAGCACAGCTGTGACGTGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS TCA 90 bp GCTGAGGTTGTGGGGTTGGACCCCAGCAGGCCCGATCCCAAAGCCTaGGCTTCAGCCACCGTGCCCTGCTGCTTTCAGGAGGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: AEVVGLDPSRPDPKA*ASATVPCCFQEGEG
Trigger: TCCTTCTCCCTCCTGAAAGCAGCAGGGCACGGTGGCTGAAGCTCAGGCTTTGGGATCGGGCCTGCTGGGGTCCAACCCCACAACCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 90 bp GTGCTGAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCCTCAGCCGTCTCTGAGTCTCCGACC +
Preference number: 5 (lower is better)
Translates to: VLKAPSSRSSRRWVP*TSLMSSSAVSESPT
Trigger: GGTCGGAGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS GCA 90 bp TGGCACTCTAGCATGGCCTCCTTGGCCAGTCCCACCTCCAGGTCCTaGAGTGGCCGCAGGAAGTCAGGAATGGACAGCCGCTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: WHSSMASLASPTSRS*SGRRKSGMDSRSSS
Trigger: TGAGCTGGAGCGGCTGTCCATTCCTGACTTCCTGCGGCCACTGCAGGACCTGGAGGTGGGACTGGCCAAGGAGGCCATGCTAGAGTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GGGTTCCATGTGAGTGTGACCATCCTCCCCGTCACAGCCACCACCTaGGGGGCGCCATCTGGAGGGCCTGGGACCACATCTGTGACATAC +
Preference number: 5 (lower is better)
Translates to: GFHVSVTILPVTATT*GAPSGGPGTTSVTY
Trigger: GTATGTCACAGATGTGGTCCCAGGCCCTCCAGATGGCGCCCCGCAGGTGGTGGCTGTGACGGGGAGGATGGTCACACTCACATGGAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp CCTGGAGTCAGCTCCTGGGCATTCCCAAAGTCACAGATCCGCACCTaGTGCTCGCCCGCAGCACCATCCCACACCAGCAGGTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PGVSSWAFPKSQIRT*CSPAAPSHTSRFSG
Trigger: GCCTGAGAACCTGCTGGTGTGGGATGGTGCTGCGGGCGAGCAGCAGGTGCGGATCTGTGACTTTGGGAATGCCCAGGAGCTGACTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp CAACCCGCTCTGAGGGACGCTGCTCACTCTCTTCTCTCTCCTGCTTaGTGGCTTGTTCCCCTGCTCTCTCCTGCTCTCCCGGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: QPALRDAAHSLLSPA*WLVPLLSPALPGAA
Trigger: GGCAGCTCCCGGGAGAGCAGGAGAGAGCAGGGGAACAAGCCAGCAAGCAGGAGAGAGAAGAGAGTGAGCAGCGTCCCTCAGAGCGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491248.1
CDS GCA 90 bp TGCGCAACCCGCTCTGAGGGACGCTGCTCACTCTCTTCTCTCTCCTaGTTGCTGGCTTGTTCCCCTGCTCTCTCCTGCTCTCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: CATRSEGRCSLSSLS*LLACSPALSCSPGS
Trigger: GCTCCCGGGAGAGCAGGAGAGAGCAGGGGAACAAGCCAGCAAGCAGGAGAGAGAAGAGAGTGAGCAGCGTCCCTCAGAGCGGGTTGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491248.1
CDS CCA 90 bp CAGGCTGTCCCTCCACCACATACACGATGTCTGGTTTGTCCAGCATaGCAGGGGCCTCCTCCAGGGTTGGGCCGTGCTCCAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: QAVPPPHTRCLVCPA*QGPPPGLGRAPAAA
Trigger: TGCAGCTGCTGGAGCACGGCCCAACCCTGGAGGAGGCCCCTGCCATGCTGGACAAACCAGACATCGTGTATGTGGTGGAGGGACAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp GGAGGGCCTGGGACCACATCTGAAAGCCGCAGTTCGAATGTCTGCTaGGTCCAAGGGCCCAACAGCCCCACAGGATCACCGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GGPGTTSESRSSNVC*VQGPNSPTGSPSLR
Trigger: CCTGAGGCTCGGTGATCCTGTGGGGCTGTTGGGCCCTTGGACCCAGCAGACATTCGAACTGCGGCTTTCAGATGTGGTCCCAGGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CCA 90 bp TGTGGGAAAGGGGCCCACCTCCTCCAGACGACCTGGGCCTCCACATaGTTGAATGTGACGGTGACGCTGGCAGGCTGTCCCTCCACCACA +
Preference number: 5 (lower is better)
Translates to: CGKGAHLLQTTWAST*LNVTVTLAGCPSTT
Trigger: TGTGGTGGAGGGACAGCCTGCCAGCGTCACCGTCACATTCAACCATGTGGAGGCCCAGGTCGTCTGGAGGAGGTGGGCCCCTTTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS-3UTR CAA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCGGCTTCGCTGGCCAGTaGAGGCTGAAGGTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLGFAGQ*RLKVGL
Trigger: GAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCC...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTCGAAGAACTGCAGCTaGTCCAGGATGCGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPSKNCS*SRMREP
Trigger: CGGCTCCCGCATCCTGGACAAGCTGCAGTTCTTCGA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCCGGGTCAGCGGGAATaGGTCCCGACGCCTAACCTC +
Preference number: 5 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLPGQRE*VPTPNL
Trigger: GAGGTTAGGCGTCGGGACCAATTCCCGCTGACCCGG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCTCTGGAGCCTTGTCTaGGGCAGGCTGGGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMLWSLV*GRLGCG
Trigger: CCCGCACCCCAGCCTGCCCAAGACAAGGCTCCAGAG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCTCTTCGTGGAGGGGTTaGGGGTGGTGGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSSWRG*GWWTHS
Trigger: GCTGTGGGTCCACCACCCCAAACCCCTCCACGAAGA...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGCCATGCCCACCTTCCTaGGTTCTCCCTGAGATGCAC +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVPCPPS*VLPEMH
Trigger: GTGCATCTCAGGGAGAACCAAGGAAGGTGGGCATGG...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp GAATGCGCTGCCGTACAGGTCACTGGCCACGGAAAGGCTATCCTCTaGCCCCCAGCTTGCGCCCACCAGATTAGCTCGAGATGCCCGCAC +
Preference number: 5 (lower is better)
Translates to: ECAAVQVTGHGKAIL*PPACAHQISSRCPH
Trigger: GTGCGGGCATCTCGAGCTAATCTGGTGGGCGCAAGCTGGGGGTCAGAGGATAGCCTTTCCGTGGCCAGTGACCTGTACGGCAGCGCATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS TCA 90 bp CTAGCTTTCCTGGGACTCGGGCCACAGCCACGGTACAGGAGCTGGTaGTGCTGCCCAGTACGTTGGTGGCCGAGCACTCATAGAGACCGG +
Preference number: 5 (lower is better)
Translates to: LAFLGLGPQPRYRSW*CCPVRWWPSTHRDR
Trigger: CCGGTCTCTATGAGTGCTCGGCCACCAACGTACTGGGCAGCATCACCAGCTCCTGTACCGTGGCTGTGGCCCGAGTCCCAGGAAAGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp GCCAACTGGCAGGTGGGTCACGTTGTAGTAACAGTCGGGGATGCCTaGGCTCACAGGGTGCCACACAGACTCCCCATCCACTCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: ANWQVGHVVVTVGDA*AHRVPHRLPIHSPL
Trigger: GAGCGGCGAGTGGATGGGGAGTCTGTGTGGCACCCTGTGAGCTCAGGCATCCCCGACTGTTACTACAACGTGACCCACCTGCCAGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp CTCATTGACCGCTTTGCAAGTGTAGAAACCAGCATCGCCACGCTCTaGAGCCAGGATCCGCAGCCGGCACAGCCCACCCTCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LIDRFASVETSIATL*SQDPQPAQPTLSLL
Trigger: GAGGAGGCTGAGGGTGGGCTGTGCCGGCTGCGGATCCTGGCTGCAGAGCGTGGCGATGCTGGTTTCTACACTTGCAAAGCGGTCAATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS GCA 90 bp TCGCTGCCCACATGGGCAATGTGCAGTGAGTGCAGACCCCCGTCCTaGCGCAGCCGCAAGTTCTCACTCTCCTCCATGGGGCAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SLPTWAMCSECRPPS*RSRKFSLSSMGQPK
Trigger: TTTTGGCTGCCCCATGGAGGAGAGTGAGAACTTGCGGCTGCGGCAGGACGGGGGTCTGCACTCACTGCACATTGCCCATGTGGGCAGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GGAGTCAGCTCCTGGGCATTCCCAAAGTCACAGATCCGCACCTGCTaGTCGCCCGCAGCACCATCCCACACCAGCAGGTTCTCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GVSSWAFPKSQIRTC*SPAAPSHTSRFSGL
Trigger: CAAGCCTGAGAACCTGCTGGTGTGGGATGGTGCTGCGGGCGAGCAGCAGGTGCGGATCTGTGACTTTGGGAATGCCCAGGAGCTGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GTGCTGAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCCTCAGCCGTCTCTGAGTCATGGGTG +
Preference number: 5 (lower is better)
Translates to: VLKAPSSRSSRRWVP*TSLMSSSAVSESWV
Trigger: CACCCATGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS GCA 90 bp GGTCCAGCCACCAGACTCTCCCCACCGCTACCTCACAGTAGCTTCTaGACAGCAATGGGATGGGAGGGTGGGCAAAGGGGCGAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GPATRLSPPLPHSSF*TAMGWEGGQRGERR
Trigger: TCTCCTCTCGCCCCTTTGCCCACCCTCCCATCCCATTGCTGTGCAGAAGCTACTGTGAGGTAGCGGTGGGGAGAGTCTGGTGGCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS GCA 90 bp TCTGGAGGGCCTGGGACCACATCTGAAAGCCGCAGTTCGAATGTCTaGTGGGTCCAAGGGCCCAACAGCCCCACAGGATCACCGAGCCTC +
Preference number: 5 (lower is better)
Translates to: SGGPGTTSESRSSNV*WVQGPNSPTGSPSL
Trigger: GAGGCTCGGTGATCCTGTGGGGCTGTTGGGCCCTTGGACCCAGCAGACATTCGAACTGCGGCTTTCAGATGTGGTCCCAGGCCCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 90 bp GGAGAAGGAAGTGTACAGATGGGCCAAGGTCCCGCCCGGCTAGGCTaGTCCTGCCAGTTACCATGTCCAGGCCATCCCTTGAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GEGSVQMGQGPARLG*SCQLPCPGHPLSLH
Trigger: GTGGAGGCTCAAGGGATGGCCTGGACATGGTAACTGGCAGGAGCAGCCTAGCCGGGCGGGACCTTGGCCCATCTGTACACTTCCTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CCA 90 bp CTGACTCACTGCGCACGTACTGGTGACCCAACTCCTCCTGGACGCTaGCAGAGAGGTTTGGTGGCGATAACCCCTTGTCCTTCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: LTHCARTGDPTPPGR*QRGLVAITPCPSAA
Trigger: GGCCGCGGAAGGACAAGGGGTTATCGCCACCAAACCTCTCTGCCAGCGTCCAGGAGGAGTTGGGTCACCAGTACGTGCGCAGTGAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGCTTCGCTGGCCAGTaGAGGCTGAAGGTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGFAGQ*RLKVGL
Trigger: GAGCCCGACCTTCAGCCTCAACTGGCCAGCGAAGCC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCTCCCACTCTGAGGGCCCGGACGACTaGGACTTCTTCCCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: NSPCSLGPSMPCRNLSHSEGPDD*DFFPRF
Trigger: GAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTC...AGAGTGGGAGAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGGGGTGCCACTGATCTaGCAGTCGAAACGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPGVPLI*QSKRAA
Trigger: AGCTGCCCGTTTCGACTGCAAGATCAGTGGCACCCC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCAGCTTTGCCCAGCTaGTTGGCAATGACGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAALPS*LAMTLL
Trigger: CAAGAGCGTCATTGCCAACAAGCTGGGCAAAGCTGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGAAGGGGGTGAGGGCTaGCTGCTGCTCTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPEGGEG*LLLLTV
Trigger: CACTGTCAAGAGCAGCAGCAAGCCCTCACCCCCTTC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCTACACGATGTCTGGTTaGTCCAGCATGGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPYTMSG*SSMAGA
Trigger: GGCCCCTGCCATGCTGGACAAACCAGACATCGTGTA...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACAGCCAACTCTGCTTaGCAGGAGACCTCACCCGCC +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPTANSA*QETSPA
Trigger: GGCGGGTGAGGTCTCCTGCAAAGCAGAGTTGGCTGT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGACGCGCTGATGCCTTaGGCTTGGCCTGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMDALMP*AWPGWG
Trigger: TCCCCAGCCAGGCCAAGCCAAAGGCATCAGCGCGTC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGCGGCTGCGCTTGAACTaGGCCTCGAACACGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMRLRLN*ASNTAS
Trigger: GGAGGCCGTGTTCGAGGCCAAGTTCAAGCGCAGCCG...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGTGGACCCACAGCCTaGAGCGAGGACAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGGPTA*SEDKAW
Trigger: CCAGGCCTTGTCCTCGCTCAAGGCTGTGGGTCCACC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCTCGCCCAGGAACTCCTaGAGCCGGTTGGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGSPRNS*SRLVVK
Trigger: CTTCACCACCAACCGGCTCAAGGAGTTCCTGGGCGA...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGTTCTCCATTCCCCTCTaGTCCCTCTGCCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVFSIPL*SLCLFP
Trigger: TGGGAACAGGCAGAGGGACAAGAGGGGAATGGAGAA...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTTTGTCAACAGCCCCTGCTCCTTGGGCCCCTCCATGCCATGCCGTAATCTCCAGCCATGTGTCCACTaGGGGAGGGAGGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: AFVNSPCSLGPSMPCRNLQPCVH*GREGPQ
Trigger: CTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTG...GAGATTACGGCATGGCATGGAGGGGCCCAAGGAGCAGGGGCTGTTGACAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CAA 90 bp TCGCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACGCTCCTGCACCAAACTaGGTTAACTCCCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: SQPPLPSTQSICGPPGLHAPAPN*VNSLIP
Trigger: GGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC...GTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CAA 90 bp GCAGCCGCCCCTTCCCAGCACTCAGTCCATCTGTGGGCCTCCTGGCCTGCACAGGCTCCTGCACCAAACTaGGTTAACTCCCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: AAAPSQHSVHLWASWPAQAPAPN*VNSLIP
Trigger: GGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC...CTGTGCAGGCCAGGAGGCCCACAGATGGACTGAGTGCTGGGAAGGGGCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS TCA 90 bp CATACAGGTGGGCATAGCAGGCAGCTTTGCCCAGCTTGTTGGCAATaGCGCTCTTGTAGACACCGGCGTGCTGAGGCCCCACGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: HTGGHSRQLCPACWQ*RSCRHRRAEAPRQG
Trigger: TCCCTGCCGTGGGGCCTCAGCACGCCGGTGTCTACAAGAGCGTCATTGCCAACAAGCTGGGCAAAGCTGCCTGCTATGCCCACCTGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 90 bp AGTGGCCGCAGGAAGTCAGGAATGGACAGCCGCTCCAGCTCACCCTaGTCTGGCTCCTCGGGAATGGATGGCATCTTCTCCAGCTTCGAG +
Preference number: 5 (lower is better)
Translates to: SGRRKSGMDSRSSSP*SGSSGMDGIFSSFE
Trigger: CTCGAAGCTGGAGAAGATGCCATCCATTCCCGAGGAGCCAGAGCAGGGTGAGCTGGAGCGGCTGTCCATTCCTGACTTCCTGCGGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp TCACGCCAACTGGCAGGTGGGTCACGTTGTAGTAACAGTCGGGGATaGCTGAGCTCACAGGGTGCCACACAGACTCCCCATCCACTCGCC +
Preference number: 5 (lower is better)
Translates to: SRQLAGGSRCSNSRG*LSSQGATQTPHPLA
Trigger: GGCGAGTGGATGGGGAGTCTGTGTGGCACCCTGTGAGCTCAGGCATCCCCGACTGTTACTACAACGTGACCCACCTGCCAGTTGGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GACTCTGCCGGACACAGGAATAACGGGGTAAGGGGCCATGATCCCTaGAGGGATGACAGCGGGAGAGAGAGTCCTGGTGGCCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: DSAGHRNNGVRGHDP*RDDSGRESPGGLHP
Trigger: AGGATGCAGGCCACCAGGACTCTCTCTCCCGCTGTCATCCCTGCAGGGATCATGGCCCCTTACCCCGTTATTCCTGTGTCCGGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS GCA 90 bp GGCAGGTTAGTGCAGCATACGCGCACGCACGCGCACACACACACATaGACACACACGCATGCACACGCACACATGCACGCACACGTGCAC +
Preference number: 5 (lower is better)
Translates to: GRLVQHTRTHAHTHT*THTHAHAHMHAHVH
Trigger: GTGCACGTGTGCGTGCATGTGTGCGTGTGCATGCGTGTGTGTGCATGTGTGTGTGTGCGCGTGCGTGCGCGTATGCTGCACTAACCTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS GCA 90 bp GTGCTGAAGGCCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTaGACATCGCTGATGTCATCCTCAGCCGTCTCTGAGTCCCTTATC +
Preference number: 5 (lower is better)
Translates to: VLKAPSSRSSRRWVP*TSLMSSSAVSESLI
Trigger: GATAAGGGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGGCCTTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498378.5
CDS CCA 90 bp CGGGCAGCAGAGGGGCCACTCCTGGGCCTGGTGGGAGAATTCCACTaGAGCAGGGCACCCACATTCCTGACATGGACTAGAGACCTAAAC +
Preference number: 5 (lower is better)
Translates to: RAAEGPLLGLVGEFH*SRAPTFLTWTRDLN
Trigger: GTTTAGGTCTCTAGTCCATGTCAGGAATGTGGGTGCCCTGCTCCAGTGGAATTCTCCCACCAGGCCCAGGAGTGGCCCCTCTGCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGAGGGCCCGGACGACTaGGACTTCTTCCCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMEGPDD*DFFPRF
Trigger: GAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGAGCCCAGCCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGGCAGTGATGATACACTaGAGCAGCACATCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: RAQPDVAAGGNRSPRPAWAVMIH*SSTSAP
Trigger: AGGGGCAGATGTGCTGCTCAAGTGTATCATCACTGC...CCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGGCTGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CTGGCCCAGCTCGTTGGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCCTGCAGTGATGATACACTaGAGCAGCACATCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LAQLVGGGGHIAPGICCPAVMIH*SSTSAP
Trigger: AGGGGCAGATGTGCTGCTCAAGTGTATCATCACTGC...AGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409595.2
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCAGGTCAGCTCATCTTaGGCCGTGCTGAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPQVSSS*AVLSLQ
Trigger: CTGCAAGCTCAGCACGGCCAAAGATGAGCTGACCTG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTGGCTGGGGATGAACTaGGCCGCAAACTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMWLGMN*AANSRP
Trigger: CGGCCTGGAGTTTGCGGCCAAGTTCATCCCCAGCCA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCGCTGGCAGAGAGGTTaGGTGGCGATAACCCCTTGT +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGRWQRG*VAITPC
Trigger: ACAAGGGGTTATCGCCACCAAACCTCTCTGCCAGCG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTACCTTCTCAGAAGAGTaGCTGAAGGGCCCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPTFSEE*LKGPCP
Trigger: TGGGCAGGGGCCCTTCAGCAACTCTTCTGAGAAGGT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCAGAGGAGTTCCCGGTaGCCACAGCTCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGQRSSR*PQLSAM
Trigger: CATTGCTGAGAGCTGTGGCAACCGGGAACTCCTCTG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTACAATCTTGAGGGCATaGTCAGGGGCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPTILRA*SGASSR
Trigger: CCTGCTGCTGGCCCCTGACAATGCCCTCAAGATTGT...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp TGTGTCCTGCCCCCGCTTTGCCACACTGACTCCCAGCCTACTGCCCTGACACCTGCGCTCTGGGATGTATaGGGGTACAGCTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: CVLPPLCHTDSQPTALTPALWDV*GYSWKA
Trigger: TGCCTTCCAGCTGTACCCCAATACATCCCAGAGCGC...AGGTGTCAGGGCAGTAGGCTGGGAGTCAGTGTGGCAAAGCGGGGGCAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCAACTCCTTGAGCCGGTaGGTGGTGAAGGTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGNSLSR*VVKVSV
Trigger: GACGCTCACCTTCACCACCAACCGGCTCAAGGAGTT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp CTCGGACCTCCAAGCGGGCCTCGCACTGCCGAGCACCATACTCATTaGCCGCTTTGCAAGTGTAGAAACCAGCATCGCCACGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LGPPSGPRTAEHHTH*PLCKCRNQHRHALQ
Trigger: CTGCAGAGCGTGGCGATGCTGGTTTCTACACTTGCAAAGCGGTCAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTTGGAGGTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS TCA 90 bp CCCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCTCTGAGTCCCTTATCTGTCTGCATC +
Preference number: 5 (lower is better)
Translates to: PRHPEAPGAGFPAHR*CHPQPSLSPLSVCI
Trigger: GATGCAGACAGATAAGGGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498378.5
CDS GCA 90 bp GTACCCCTGACAAAGACCTTCTCAGAAGAGTTGCTGAAGGGCCCCTaGCCAGCACGGTTGGCACAGGCCACACGGAACCTCACAGTCACG +
Preference number: 5 (lower is better)
Translates to: VPLTKTFSEELLKGP*PARLAQATRNLTVT
Trigger: CGTGACTGTGAGGTTCCGTGTGGCCTGTGCCAACCGTGCTGGGCAGGGGCCCTTCAGCAACTCTTCTGAGAAGGTCTTTGTCAGGGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp ACATGCATGCACATACACGCACGCATGCGCACGCACACGCACACATaGACGCACAGGCACGCAGACCTGGCTAGGGCCCTTCTGCATAGA +
Preference number: 5 (lower is better)
Translates to: TCMHIHARMRTHTHT*THRHADLARALLHR
Trigger: TCTATGCAGAAGGGCCCTAGCCAGGTCTGCGTGCCTGTGCGTGCATGTGTGCGTGTGCGTGCGCATGCGTGCGTGTATGTGCATGCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS GCA 90 bp AGCAGCATGGCTAGGACGCCCATTTCTTGGGTGAGCTGGGCCTGGTaGAGAGGAACACACACCGCAGACAAGTCACATCCCGACCTCGGT +
Preference number: 5 (lower is better)
Translates to: SSMARTPISWVSWAW*RGTHTADKSHPDLG
Trigger: ACCGAGGTCGGGATGTGACTTGTCTGCGGTGTGTGTTCCTCTGCACCAGGCCCAGCTCACCCAAGAAATGGGCGTCCTAGCCATGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS CCA 90 bp GAACCCTGGAGCAGCATGGCTAGGACGCCCATTTCTTGGGTGAGCTaGGCCTGGTGCAGAGGAACACACACCGCAGACAAGTCACATCCC +
Preference number: 5 (lower is better)
Translates to: EPWSSMARTPISWVS*AWCRGTHTADKSHP
Trigger: GGGATGTGACTTGTCTGCGGTGTGTGTTCCTCTGCACCAGGCCCAGCTCACCCAAGAAATGGGCGTCCTAGCCATGCTGCTCCAGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS CCA 90 bp CCAACTGCAGGCTCCAAAAGCAGGGGAAGCAGGTCTATGGAACCCTaGAGCAGCATGGCTAGGACGCCCATTTCTTGGGTGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PTAGSKSRGSRSMEP*SSMARTPISWVSWA
Trigger: GGCCCAGCTCACCCAAGAAATGGGCGTCCTAGCCATGCTGCTCCAGGGTTCCATAGACCTGCTTCCCCTGCTTTTGGAGCCTGCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS-3UTR CAA 90 bp CCAGATGTTGCTGCTGGTGGTAACCGAAGCCCCAGGCCCGCCTGGCTCAGCGTGAAATGCATCTTGCATTaGAGCAGTGCAGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PDVAAGGNRSPRPAWLSVKCILH*SSAGCS
Trigger: GCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTT...CACGCTGAGCCAGGCGGGCCTGGGGCTTCGGTTACCACCAGCAGCAACATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGGCTTGCTGCTGCTCTaGACAGTGGTGCTGAGGACC +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMGLLLL*TVVLRT
Trigger: GGTCCTCAGCACCACTGTCAAGAGCAGCAGCAAGCC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCAGCTGCCGCCCATCTTaGCAGGACACGATGATCACT +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPSCRPS*QDTMIT
Trigger: AGTGATCATCGTGTCCTGCAAAGATGGGCGGCAGCT...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCCACTGGTTTAACCCCTaGAGGAGTGGAGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGHWFNP*RSGGWD
Trigger: ATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGTG...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCAGCAGGTTGTCTGGCTaGATGTCTAGGTGGAGCACG +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGSRLSG*MSRWST
Trigger: CGTGCTCCACCTAGACATCAAGCCAGACAACCTGCT...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCCCAAAGTCCACAATCTaGAGGGCATTGTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPPKSTI*RALSGA
Trigger: GGCCCCTGACAATGCCCTCAAGATTGTGGACTTTGG...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGCCCAGCCATGTGTCCACTaGGGGAGGGAGGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: APAPNLVNSLIPRQSTPAQPCVH*GREGPQ
Trigger: CTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTG...GGCTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS TCA 90 bp CTATGGAACCCTGGAGCAGCATGGCTAGGACGCCCATTTCTTGGGTaGGCTGGGCCTGGTGCAGAGGAACACACACCGCAGACAAGTCAC +
Preference number: 5 (lower is better)
Translates to: LWNPGAAWLGRPFLG*AGPGAEEHTPQTSH
Trigger: GTGACTTGTCTGCGGTGTGTGTTCCTCTGCACCAGGCCCAGCTCACCCAAGAAATGGGCGTCCTAGCCATGCTGCTCCAGGGTTCCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS GCA 90 bp CATTTGCGGCCATCGAAATGCATCTTGCATTTGAGCAGTGCAGGCTaGAGCAGGCGGCCACGGCACAGCCAATCCACCTCCACGTCAGTG +
Preference number: 5 (lower is better)
Translates to: HLRPSKCILHLSSAG*SRRPRHSQSTSTSV
Trigger: CACTGACGTGGAGGTGGATTGGCTGTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp CAGCTTGCATTTGCGGCCATCGAAATGCATCTTGCATTTGAGCAGTaGAGGCTGCAGCAGGCGGCCACGGCACAGCCAATCCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: QLAFAAIEMHLAFEQ*RLQQAATAQPIHLH
Trigger: GTGGAGGTGGATTGGCTGTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp GTGCCCAGCACTGGGGACCCCCATACTTGGGCTTGTTATTCCAGCTaGCCCAGTGGTTCTGGTATCCTTGGCACTTACTGGTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: VPSTGDPHTWACYSS*PSGSGILGTYWCCH
Trigger: GTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACAAGCCCAAGTATGGGGGTCCCCAGTGCTGGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 90 bp AGGTCTATGGAACCCTGGAGCAGCATGGCTAGGACGCCCATTTCTTaGGTGAGCTGGGCCTGGTGCAGAGGAACACACACCGCAGACAAG +
Preference number: 5 (lower is better)
Translates to: RSMEPWSSMARTPIS*VSWAWCRGTHTADK
Trigger: CTTGTCTGCGGTGTGTGTTCCTCTGCACCAGGCCCAGCTCACCCAAGAAATGGGCGTCCTAGCCATGCTGCTCCAGGGTTCCATAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGTGGGCCTCCACATGGTaGAATGTGACGGTGACGCTG +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMWASTW*NVTVTL
Trigger: CAGCGTCACCGTCACATTCAACCATGTGGAGGCCCA...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGCAGCACCTCGTCCTaGTACCACATGATGTCCGGC +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSSTSS*YHMMSG
Trigger: GCCGGACATCATGTGGTACAAGGACGAGGTGCTGCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGCAGGTTCTCAGGCTaGACATCGAGGTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSRFSG*TSRCST
Trigger: CGTGCTGCACCTCGATGTCAAGCCTGAGAACCTGCT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp ACCAATGGGTCTCCCACTCTGGCTTTGGCCTGGGGTGGCATCAGGTCCAGGCCCCTGGGGTCTCTGTCCTaGAAGGTCTATGAGGTAAGA +
Preference number: 5 (lower is better)
Translates to: TNGSPTLALAWGGIRSRPLGSLS*KVYEVR
Trigger: TCTTACCTCATAGACCTTCAAGGACAGAGACCCCAG...GGGCCTGGACCTGATGCCACCCCAGGCCAAAGCCAGAGTGGGAGACCCATTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp GTTTGGATCTGCAGCAGTGTCAGGCAGGTTGTGTACCTGGGGGTGTaGGTAGAGAGCTTTGGGCCTTGGAGGGAGGCTAGGAAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VWICSSVRQVVYLGV*VESFGPWREARKKA
Trigger: GGCCTTCTTCCTAGCCTCCCTCCAAGGCCCAAAGCTCTCTACTCACACCCCCAGGTACACAACCTGCCTGACACTGCTGCAGATCCAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGAATGTCCCGTGGCATaGGTGGGAACCCCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMECPVA*VGTPVE
Trigger: TTCAACTGGGGTTCCCACCAATGCCACGGGACATTC...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp ACAGGGGGCCTGGTCGGGTGGGTGGTAGATAAGTGTGGGGGTGAGTGGGAGGGTCGGAAAACTTCGTGGTaGCCAAAGCATGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: TGGLVGWVVDKCGGEWEGRKTSW*PKHGNE
Trigger: TTCATTGCCATGCTTTGGCAACCACGAAGTTTTCCG...ACCCTCCCACTCACCCCCACACTTATCTACCACCCACCCGACCAGGCCCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403148.6
CDS GCA 90 bp ATGATCCCTGCAGGGATGACAGCGGGAGAGAGAGTCCTGGTGGCCTaGATCCTAGAAAGCCAAACCCAGACAGAGGGGCTTCTAGAAAGC +
Preference number: 5 (lower is better)
Translates to: MIPAGMTAGERVLVA*ILESQTQTEGLLES
Trigger: GCTTTCTAGAAGCCCCTCTGTCTGGGTTTGGCTTTCTAGGATGCAGGCCACCAGGACTCTCTCTCCCGCTGTCATCCCTGCAGGGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS GCA 90 bp GTATCCTTGGCACTTACTGGTGCTGCCACTGGCCACACACACACATaGACACACACACACACACACCTGCTTGTGTCCAGTCCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: VSLALTGAATGHTHT*THTHTHLLVSSPAA
Trigger: TGCGGCTGGACTGGACACAAGCAGGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS GCA 90 bp TCCAGCTGCCCCAGTGGTTCTGGTATCCTTGGCACTTACTGGTGCTaGCACTGGCCACACACACACATGCACACACACACACACACACCT +
Preference number: 5 (lower is better)
Translates to: SSCPSGSGILGTYWC*HWPHTHMHTHTHTP
Trigger: AGGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 90 bp AGGAGTAGAGGAAGACACTGGTTTAACCCCTTGAGGAGTGGAGGCTaGGATCGGGGTCCCAGTGTCAAGGACGAAAGGCTTGGGCTCACT +
Preference number: 5 (lower is better)
Translates to: RSRGRHWFNPLRSGG*DRGPSVKDERLGLT
Trigger: AGTGAGCCCAAGCCTTTCGTCCTTGACACTGGGACCCCGATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGTGTCTTCCTCTACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp GCCGGCTCCAGGGATGTACAGAGAGAACCTTTCGCAAGAAGAGGGTaGCGCTCTGGGATGTATTGGGGTACAGCTGGAAGGCATCAAAGC +
Preference number: 5 (lower is better)
Translates to: AGSRDVQREPFARRG*RSGMYWGTAGRHQS
Trigger: GCTTTGATGCCTTCCAGCTGTACCCCAATACATCCCAGAGCGCCACCCTCTTCTTGCGAAAGGTTCTCTCTGTACATCCCTGGAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp GGACCCCCATACTTGGGCTTGTTATTCCAGCTGCCCCAGTGGTTCTaGTATCCTTGGCACTTACTGGTGCTGCCACTGGCCACACACACA +
Preference number: 5 (lower is better)
Translates to: GPPYLGLLFQLPQWF*YPWHLLVLPLATHT
Trigger: TGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACAAGCCCAAGTATGGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS-3UTR CAA 90 bp CTGTCTCACCCCACCTCAGCTCCGAGGCATCCTTCCCTGACTGTCACAGACACAGCAGTGATGATACACTaGAGCAGCACATCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LSHPTSAPRHPSLTVTDTAVMIH*SSTSAP
Trigger: AGGGGCAGATGTGCTGCTCAAGTGTATCATCACTGC...TGTGTCTGTGACAGTCAGGGAAGGATGCCTCGGAGCTGAGGTGGGGTGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTCCATCGAAATGCATCTaGCATTTGAGCAGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSPSKCI*HLSSAG
Trigger: GCCTGCACTGCTCAAATGCAAGATGCATTTCGATGG...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp CCTCTTGTCCCTCTGCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCGATGTAAGTAGCAGCTaGCATTTGCGGCCATCGAAA +
Preference number: 5 (lower is better)
Translates to: PLVPLPVPTLLSLTNGSPDVSSS*HLRPSK
Trigger: TTTCGATGGCCGCAAATGCAAGCTGCTACTTACATC...GGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGCAGAGGGACAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp AGCAGAGCGCCCAGGGCTGTATCCACTGGACAGGAGGACAGAGCGAGTGTGAGTAGCAGCACCTGGTCCTaGAGTTTGATGTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: SRAPRAVSTGQEDRASVSSSTWS*SLMWKT
Trigger: AGTCTTCCACATCAAACTCAAGGACCAGGTGCTGCT...ACTCACACTCGCTCTGTCCTCCTGTCCAGTGGATACAGCCCTGGGCGCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp ACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCGCCAGCCATGTGTCCACTaGGGGAGGGAGGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: TDRQTDRQACSSSSTCTRQPCVH*GREGPQ
Trigger: CTGTGGACCCTCCCTCCCCAAGTGGACACATGGCTG...GCGAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS-3UTR CAA 90 bp CCCGTCATCCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTGATGTCATCAGGAGCGGAAAATGGTaGCCAAAGCATGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: PVIPKLQALGSLHIADVIRSGKW*PKHGNE
Trigger: TTCATTGCCATGCTTTGGCAACCATTTTCCGCTCCT...GATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGGATGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420132.5
CDS GCA 90 bp GATGTCAGTGACTCCAGACACGGGGCTCTGATTGACAATCTCGGGTaGTACAAACTCAGGTGTGCCATACTGGCAGTACTGGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DVSDSRHGALIDNLG*YKLRCAILAVLGLS
Trigger: GGAGAGCCCCAGTACTGCCAGTATGGCACACCTGAGTTTGTAGCACCCGAGATTGTCAATCAGAGCCCCGTGTCTGGAGTCACTGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp TGCCCCAGTGGTTCTGGTATCCTTGGCACTTACTGGTGCTGCCACTaGCCACACACACACATGCACACACACACACACACACCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: CPSGSGILGTYWCCH*PHTHMHTHTHTPAC
Trigger: ACAAGCAGGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS-3UTR CAA 90 bp AGCTGGATGGCTGGGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGAGTAGCAGCTTGCATTaGCGGCCATCGAAATGCATC +
Preference number: 5 (lower is better)
Translates to: SWMAGRDGQDNMGSRDRMSSSLH*RPSKCI
Trigger: GATGCATTTCGATGGCCGCAAATGCAAGCTGCTACT...CATCCGATCCCTACTGCCCATGTTGTCCTGACCATCCCTCCCAGCCATCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS-3UTR CAA 90 bp GCCTGTTCCCACCCTGCTGAGCCTGACCAATGGGTCTCCCACTCTGGCTTTGGCGGATGTTCATCAATGTaGTCCGGTCATTTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: ACSHPAEPDQWVSHSGFGGCSSM*SGHFPQ
Trigger: TTGGGGAAAATGACCGGACAACATTGATGAACATCC...GCCAAAGCCAGAGTGGGAGACCCATTGGTCAGGCTCAGCAGGGTGGGAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 90 bp ACAACACCCACAGGCCAGATGTCAGTGACTCCAGACACGGGGCTCTaGTTGACAATCTCGGGTGCTACAAACTCAGGTGTGCCATACTGG +
Preference number: 5 (lower is better)
Translates to: TTPTGQMSVTPDTGL*LTISGATNSGVPYW
Trigger: CCAGTATGGCACACCTGAGTTTGTAGCACCCGAGATTGTCAATCAGAGCCCCGTGTCTGGAGTCACTGACATCTGGCCTGTGGGTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp GTCACCACATACACAGGAGTAGAGGAAGACACTGGTTTAACCCCTTaGGGAGTGGAGGCTGGGATCGGGGTCCCAGTGTCAAGGACGAAA +
Preference number: 5 (lower is better)
Translates to: VTTYTGVEEDTGLTP*GVEAGIGVPVSRTK
Trigger: TTTCGTCCTTGACACTGGGACCCCGATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGTGTCTTCCTCTACTCCTGTGTATGTGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 90 bp TATTCCAGCTGCCCCAGTGGTTCTGGTATCCTTGGCACTTACTGGTaGTGCCACTGGCCACACACACACATGCACACACACACACACACA +
Preference number: 5 (lower is better)
Translates to: YSSCPSGSGILGTYW*CHWPHTHMHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 90 bp TGGGGGTGTCGGAAGGAATCCCCAAGAGAAAGAAGCACCAAGACATaGGTTAATACAGAGAAGCGAGGCAGAGCCAGGCCCTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: WGCRKESPRERSTKT*VNTEKRGRARPWRE
Trigger: TTCTCTCCAGGGCCTGGCTCTGCCTCGCTTCTCTGTATTAACCCATGTCTTGGTGCTTCTTTCTCTTGGGGATTCCTTCCGACACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CCA 90 bp TGTTATTCCAGCTGCCCCAGTGGTTCTGGTATCCTTGGCACTTACTaGTGCTGCCACTGGCCACACACACACATGCACACACACACACAC +
Preference number: 5 (lower is better)
Translates to: CYSSCPSGSGILGTY*CCHWPHTHMHTHTH
Trigger: GTGTGTGTGTGTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 90 bp TACTTGGGCTTGTTATTCCAGCTGCCCCAGTGGTTCTGGTATCCTTaGCACTTACTGGTGCTGCCACTGGCCACACACACACATGCACAC +
Preference number: 5 (lower is better)
Translates to: YLGLLFQLPQWFWYP*HLLVLPLATHTHAH
Trigger: GTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACAAGCCCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 90 bp CTGGTGGGAGAATTCCACTGGAGCAGGGCACCCACATTCCTGACATaGACTAGAGACCTAAACTACCAACTGCAGGCTCCAAAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LVGEFHWSRAPTFLT*TRDLNYQLQAPKAG
Trigger: CCCTGCTTTTGGAGCCTGCAGTTGGTAGTTTAGGTCTCTAGTCCATGTCAGGAATGTGGGTGCCCTGCTCCAGTGGAATTCTCCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS-3UTR CAA 90 bp ACACAGACAGACAAACAGATAGACAGGCCTGTAGCAGCAGTAGCACATGCACTCTCGAAGAACTGCAGCTaGTCCAGGATGCGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: TQTDKQIDRPVAAVAHALSKNCS*SRMREP
Trigger: CGGCTCCCGCATCCTGGACAAGCTGCAGTTCTTCGA...GAGTGCATGTGCTACTGCTGCTACAGGCCTGTCTATCTGTTTGTCTGTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396698.5
CDS-3UTR CAA 90 bp CTGCTCCTGCACCAAACTTGGTTAACTCCCTCATTCCCAGACAGAGCACCCCAGGCTCCTGCACCAAACTaGGTTAACTCCCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: LLLHQTWLTPSFPDRAPQAPAPN*VNSLIP
Trigger: GGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGC...CTGGGGTGCTCTGTCTGGGAATGAGGGAGTTAACCAAGTTTGGTGCAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
CDS GCA 90 bp TCATGTACAGATGTAAGTAGCAGCTTGCATTTGCGGCCATCGAAATaGATCTTGCATTTGAGCAGTGCAGGCTGCAGCAGGCGGCCACGG +
Preference number: 5 (lower is better)
Translates to: SCTDVSSSLHLRPSK*ILHLSSAGCSRRPR
Trigger: CCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACTTACATCTGTACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 90 bp AGACACAAAGGAAGTCACCACATACACAGGAGTAGAGGAAGACACTaGTTTAACCCCTTGAGGAGTGGAGGCTGGGATCGGGGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: RHKGSHHIHRSRGRH*FNPLRSGGWDRGPS
Trigger: ACTGGGACCCCGATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGTGTCTTCCTCTACTCCTGTGTATGTGGTGACTTCCTTTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 90 bp CATCCTCAGCCGTCTCTGAGTCCCTTATCTGTCTGCATCATGATGTaGCAGGCACCTTCCTCAAGGTCCCTCCCTTCTACTGTTGAATCG +
Preference number: 5 (lower is better)
Translates to: HPQPSLSPLSVCIMM*QAPSSRSLPSTVES
Trigger: CGATTCAACAGTAGAAGGGAGGGACCTTGAGGAAGGTGCCTGTCACATCATGATGCAGACAGATAAGGGACTCAGAGACGGCTGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498378.5
CDS GCA 90 bp ATGTCTTTAACACGTCAGCCATCATGTATGGCGTACCAGGCCCCATaGAAGGCACCTGGAGGGGCACAAGCTTTCAAACAGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: MSLTRQPSCMAYQAP*KAPGGAQAFKQTKN
Trigger: GTTCTTTGTCTGTTTGAAAGCTTGTGCCCCTCCAGGTGCCTTGCATGGGGCCTGGTACGCCATACATGATGGCTGACGTGTTAAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS TCA 90 bp AAAGGAAGTCAGAAGGAGCATTCTCGAAACAGGTCAGGGCAGCCTTaGCTCCATGTTAGTGTGGCCGTTCCTCAACTTCATCCACAATTA +
Preference number: 5 (lower is better)
Translates to: KGSQKEHSRNRSGQP*LHVSVAVPQLHPQL
Trigger: TAATTGTGGATGAAGTTGAGGAACGGCCACACTAACATGGAGTCAAGGCTGCCCTGACCTGTTTCGAGAATGCTCCTTCTGACTTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS CAA 90 bp CCCGCACCAGCGGCTCCACCCCCAGGTGCCGTGGCCCGGCCCCGGTaGCCTGTGCTTGCCTTGGGCTGCCCGGGAGGCGGCGGGTGCCAC +
Preference number: 6 (lower is better)
Translates to: PAPAAPPPGAVARPR*PVLALGCPGGGGCH
Trigger: GTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCGCTGGTGCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp CCCAGGTGCCGTGGCCCGGCCCCGGTTGCCTGTGCTTaGCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACCC +
Preference number: 6 (lower is better)
Translates to: PRCRGPAPVACA*LGLPGRRRVPP
Trigger: GGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp CACCCCCAGGTGCCGTGGCCCGGCCCCGGTTGCCTGTaGTTGCCTTGGGCTGCCCGGGAGGCGGCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: HPQVPWPGPGCL*LPWAAREAAGA
Trigger: GGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp CGGCTCCACCCCCAGGTGCCGTGGCCCGGCCCCGGTTaGCTGTGCTTGCCTTGGGCTGCCCGGGAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RLHPQVPWPGPG*LCLPWAAREAA
Trigger: CGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS CAA 72 bp CCCCAGGTGCCGTGGCCCGGCCCCGGTTGCCTGTGCTaGCCTTGGGCTGCCCGGGAGGCGGCGGGTGCCACC +
Preference number: 6 (lower is better)
Translates to: PQVPWPGPGCLC*PWAAREAAGAT
Trigger: GGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS CAA 72 bp GCGGCTCCACCCCCAGGTGCCGTGGCCCGGCCCCGGTaGCCTGTGCTTGCCTTGGGCTGCCCGGGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: AAPPPGAVARPR*PVLALGCPGGG
Trigger: GCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS CCA 72 bp GTGCCGTGGCCCGGCCCCGGTTGCCTGTGCTTGCCTTaGGCTGCCCGGGAGGCGGCGGGTGCCACCCCCACT +
Preference number: 6 (lower is better)
Translates to: VPWPGPGCLCLP*AAREAAGATPT
Trigger: AGTGGGGGTGGCACCCGCCGCCTCCCGGGCAGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS CCA 72 bp GGGTGGCGCTGCGCGGGAGGGGTCCGCCGCAGCCGCTaGGACAGTGACAGCGAGAGGCGGCGGACGAGGCCA +
Preference number: 6 (lower is better)
Translates to: GWRCAGGVRRSR*DSDSERRRTRP
Trigger: TGGCCTCGTCCGCCGCCTCTCGCTGTCACTGTCCCAGCGGCTGCGGCGGACCCCTCCCGCGCAGCGCCACCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GCGTCCCGCTCACCACCACCCGCAGCCGCACGTCGCTaGCCGCGCACACCGCCGCGTTCTTCAGGGGCCGCA +
Preference number: 6 (lower is better)
Translates to: ASRSPPPAAARR*PRTPPRSSGAA
Trigger: TGCGGCCCCTGAAGAACGCGGCGGTGTGCGCGGGCAGCGACGTGCGGCTGCGGGTGGTGGTGAGCGGGACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS GCA 72 bp CCTCGCAGGAGGCCCGGCCCCGCTCGTTCTGGGCCATaGAGCTGTACACGCCGGCGTCCTGCGCCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: PRRRPGPARSGP*SCTRRRPAPRS
Trigger: GCTGCGGGGCGCAGGACGCCGGCGTGTACAGCTGCATGGCCCAGAACGAGCGGGGCCGGGCCTCCTGCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS GCA 72 bp CTGGCGCCCGCAGTTCTTCCTGCGAGGCCCCGGGGGTaGCCCACGGTGCGCCGCGCTCCGACTTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: LAPAVLPARPRG*PTVRRAPTWAA
Trigger: AGCAGCCCAAGTCGGAGCGCGGCGCACCGTGGGGCACCCCCGGGGCCTCGCAGGAAGAACTGCGGGCGCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp GCCGACAGGCGGCCTGAGGCCTCGCTCAGTGGCGTCTaGGGTCGGGATTCCGCGGTGCCCGCCAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: ADRRPEASLSGV*GRDSAVPAREG
Trigger: GCCCTCCCTGGCGGGCACCGCGGAATCCCGACCCCAGACGCCACTGAGCGAGGCCTCAGGCCGCCTGTCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS TCA 72 bp GCGGCCCAGCTCCTGGGCGAAGCGCAGCTCGAGGTCTaGGGCCGGGCTGCGCTGACGCGTGCGCTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: AAQLLGEAQLEV*GRAALTRALVQ
Trigger: CTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 72 bp CGGTGGTGGTGTCCTCGGGCAGCACAGGCTCCTGAGTaGGACGGTGGGGCGACGTGGGGGTGGCCGCGGGCT +
Preference number: 6 (lower is better)
Translates to: RWWCPRAAQAPE*DGGATWGWPRA
Trigger: AGCCCGCGGCCACCCCCACGTCGCCCCACCGTCGCACTCAGGAGCCTGTGCTGCCCGAGGACACCACCACCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS GCA 72 bp GATGGGGCACGCTGCAGCGTGGCGCGCAGGGACTCGTaGGAGCGCACCAGCTCCTCCCGCGACGTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: DGARCSVARRDS*ERTSSSRDVER
Trigger: CCGCTCCACGTCGCGGGAGGAGCTGGTGCGCTCGCACGAGTCCCTGCGCGCCACGCTGCAGCGTGCCCCATC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 72 bp CAAGGCGCCGCAGACTCTCGCCCTCGGACGTGGCCCTaGGAAGCCGTCCGAACAGCGGCGTGCTGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: QGAADSRPRTWP*EAVRTAACCGP
Trigger: CGGGCCGCAGCACGCCGCTGTTCGGACGGCTTCGCAGGGCCACGTCCGAGGGCGAGAGTCTGCGGCGCCTTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GGCGTGGTGGCGCCGGCCTGGGCGGCCAACTGGTTGTaGGGAAGGCCAAGGCGCCGCAGACTCTCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: GVVAPAWAANWL*GRPRRRRLSPS
Trigger: CGAGGGCGAGAGTCTGCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp TCCCGCGACGTGGAGCGGCGGATGCGGCCCAGCTCCTaGGCGAAGCGCAGCTCGAGGTCTGAGGCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: SRDVERRMRPSS*AKRSSRSEAGL
Trigger: CAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCATCCGCCGCTCCACGTCGCGGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp GGGACTCGTGCGAGCGCACCAGCTCCTCCCGCGACGTaGAGCGGCGGATGCGGCCCAGCTCCTGGGCGAAGC +
Preference number: 6 (lower is better)
Translates to: GTRASAPAPPAT*SGGCGPAPGRS
Trigger: GCTTCGCCCAGGAGCTGGGCCGCATCCGCCGCTCCACGTCGCGGGAGGAGCTGGTGCGCTCGCACGAGTCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp CGCCGGGCTCTCGAGGGGATGGGGCACGCTGCAGCGTaGCGCGCAGGGACTCGTGCGAGCGCACCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: RRALEGMGHAAA*RAGTRASAPAP
Trigger: AGGAGCTGGTGCGCTCGCACGAGTCCCTGCGCGCCACGCTGCAGCGTGCCCCATCCCCTCGAGAGCCCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp CCCAGGGACTCGGCGGAAGGCGTGGTGGCGCCGGCCTaGGCGGCCAACTGGTTGTGCGGAAGGCCAAGGCGC +
Preference number: 6 (lower is better)
Translates to: PRDSAEGVVAPA*AANWLCGRPRR
Trigger: GCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCCTTCCGCCGAGTCCCTGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GCTCGAGATGCCCGCACCAGCGGCTCCACCCCCAGGTaGCGTGGCCCGGCCCCGGTTGCCTGTGCTTGCCTT +
Preference number: 6 (lower is better)
Translates to: ARDARTSGSTPR*RGPAPVACACL
Trigger: AAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCGCTGGTGCGGGCATCTCGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp CCTGGGCGAAGCGCAGCTCGAGGTCTGAGGCCGGGCTaGGCTGACGCGTGCGCTCGTCCAGCGAGGCCGCTT +
Preference number: 6 (lower is better)
Translates to: PGRSAARGLRPG*ADACARPARPL
Trigger: AAGCGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGCCCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 72 bp AGCGCACCAGCTCCTCCCGCGACGTGGAGCGGCGGATaGGGCCCAGCTCCTGGGCGAAGCGCAGCTCGAGGT +
Preference number: 6 (lower is better)
Translates to: SAPAPPATWSGG*GPAPGRSAARG
Trigger: ACCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCATCCGCCGCTCCACGTCGCGGGAGGAGCTGGTGCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp AGATGCCCGCACCAGCGGCTCCACCCCCAGGTGCCGTaGCCCGGCCCCGGTTGCCTGTGCTTGCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: RCPHQRLHPQVP*PGPGCLCLPWA
Trigger: AGCCCAAGGCAAGCACAGGCAACCGGGGCCGGGCCACGGCACCTGGGGGTGGAGCCGCTGGTGCGGGCATCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS CCA 72 bp AGAGAAGAGCGGGGGCTCGCCGGGCTCTCGAGGGGATaGGGCACGCTGCAGCGTGGCGCGCAGGGACTCGTG +
Preference number: 6 (lower is better)
Translates to: REERGLAGLSRG*GTLQRGAQGLV
Trigger: CACGAGTCCCTGCGCGCCACGCTGCAGCGTGCCCCATCCCCTCGAGAGCCCGGCGAGCCCCCGCTCTTCTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp GGAGGTGGGGAGGCCACCCTGGCAAAGACAGCAGCGTaGGGCTTGGGCTCTGAAGGCGGCGCGGCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: GGGEATLAKTAA*GLGSEGGAAGP
Trigger: GGGCCCTGCCGCGCCGCCTTCAGAGCCCAAGCCCCACGCTGCTGTCTTTGCCAGGGTGGCCTCCCCACCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GCGGAAGGCGTGGTGGCGCCGGCCTGGGCGGCCAACTaGTTGTGCGGAAGGCCAAGGCGCCGCAGACTCTCG +
Preference number: 6 (lower is better)
Translates to: AEGVVAPAWAAN*LCGRPRRRRLS
Trigger: CGAGAGTCTGCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCCTTCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp GAAGGCGTGGTGGCGCCGGCCTGGGCGGCCAACTGGTaGTGCGGAAGGCCAAGGCGCCGCAGACTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: EGVVAPAWAANW*CGRPRRRRLSP
Trigger: GGGCGAGAGTCTGCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp GACTCGGCGGAAGGCGTGGTGGCGCCGGCCTGGGCGGCCAACTGGTaGTGCGGAAGGCCAAGGCGCCGCAGACTCTCGCCCTCGGACGTG +
Preference number: 6 (lower is better)
Translates to: DSAEGVVAPAWAANW*CGRPRRRRLSPSDV
Trigger: CACGTCCGAGGGCGAGAGTCTGCGGCGCCTTGGCCTTCCGCACAACCAGTTGGCCGCCCAGGCCGGCGCCACCACGCCTTCCGCCGAGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp TCTTCGGTGGTGGTGTCCTCGGGCAGCACAGGCTCCTaGGTGCGACGGTGGGGCGACGTGGGGGTGGCCGCG +
Preference number: 6 (lower is better)
Translates to: SSVVVSSGSTGS*VRRWGDVGVAA
Trigger: CGCGGCCACCCCCACGTCGCCCCACCGTCGCACTCAGGAGCCTGTGCTGCCCGAGGACACCACCACCGAAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS TCA 72 bp GCGAAGCGCAGCTCGAGGTCTGAGGCCGGGCTGCGCTaGCGCGTGCGCTCGTCCAGCGAGGCCGCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: AKRSSRSEAGLR*RVRSSSEAAFC
Trigger: GCAGAAAGCGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGCGCTTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS TCA 72 bp AGAGGCGGCGGACGAGGCCAGGCTCTCCGACAGCCCTaGGGTCCTGCACCGAGCGTGAGCGCTCAGGCCGTC +
Preference number: 6 (lower is better)
Translates to: RGGGRGQALRQP*GPAPSVSAQAV
Trigger: GACGGCCTGAGCGCTCACGCTCGGTGCAGGACCTCAGGGCTGTCGGAGAGCCTGGCCTCGTCCGCCGCCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GTCAGCGGGAATTGGTCCCGACGCCTAACCTCCTGCTaGGGGCCTTCCCCCGGCTCTGTCCTGCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: VSGNWSRRLTSC*GPSPGSVLPAG
Trigger: GCCGGCGGGCAGGACAGAGCCGGGGGAAGGCCCGCAGCAGGAGGTTAGGCGTCGGGACCAATTCCCGCTGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 72 bp CGGGTCAGCGGGAATTGGTCCCGACGCCTAACCTCCTaGTGCGGGCCTTCCCCCGGCTCTGTCCTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: RVSGNWSRRLTS*CGPSPGSVLPA
Trigger: GGCGGGCAGGACAGAGCCGGGGGAAGGCCCGCAGCAGGAGGTTAGGCGTCGGGACCAATTCCCGCTGACCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 72 bp GGCTGCCCACCCTGGCTCCCGCAGGCCTGTGACCAGTaGCGTCCACTGGTCCGAGCCCAGCACCTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: GCPPWLPQACDQ*RPLVRAQHLVL
Trigger: CAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGTCACAGGCCTGCGGGAGCCAGGGTGGGCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 72 bp CGGACGAGGCCAGGCTCTCCGACAGCCCTGAGGTCCTaGACCGAGCGTGAGCGCTCAGGCCGTCGCACCAGC +
Preference number: 6 (lower is better)
Translates to: RTRPGSPTALRS*TERERSGRRTS
Trigger: GCTGGTGCGACGGCCTGAGCGCTCACGCTCGGTGCAGGACCTCAGGGCTGTCGGAGAGCCTGGCCTCGTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GAAGGCCAAGGCGCCGCAGACTCTCGCCCTCGGACGTaGCCCTGCGAAGCCGTCCGAACAGCGGCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: EGQGAADSRPRT*PCEAVRTAACC
Trigger: GCAGCACGCCGCTGTTCGGACGGCTTCGCAGGGCCACGTCCGAGGGCGAGAGTCTGCGGCGCCTTGGCCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CCTCAGCCGTCTCTGAGTCTCCGACCTCCAGCACTGTaGGCACCGCCTCGCAGGAGGCCCGGCCCCGCTCGT +
Preference number: 6 (lower is better)
Translates to: PQPSLSLRPPAL*APPRRRPGPAR
Trigger: ACGAGCGGGGCCGGGCCTCCTGCGAGGCGGTGCTCACAGTGCTGGAGGTCGGAGACTCAGAGACGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 72 bp CAGCCTAGGCGATCGGCCCAACGCCGACAGGCGGCCTaGGGCCTCGCTCAGTGGCGTCTGGGGTCGGGATTC +
Preference number: 6 (lower is better)
Translates to: QPRRSAQRRQAA*GLAQWRLGSGF
Trigger: GAATCCCGACCCCAGACGCCACTGAGCGAGGCCTCAGGCCGCCTGTCGGCGTTGGGCCGATCGCCTAGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS TCA 72 bp AGGTCTGTGTGCCGTGACGGTTTCGGGCGGTGCAGGTaGGGGCCCCCATGTCCCGGCGGCTCACCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: RSVCRDGFGRCR*GPPCPGGSPGR
Trigger: TCTGCCGGGTGAGCCGCCGGGACATGGGGGCCCTCACCTGCACCGCCCGAAACCGTCACGGCACACAGACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS TCA 72 bp AGGCTCTCCGACAGCCCTGAGGTCCTGCACCGAGCGTaGGCGCTCAGGCCGTCGCACCAGCTCCAGCGGGGT +
Preference number: 6 (lower is better)
Translates to: RLSDSPEVLHRA*ALRPSHQLQRG
Trigger: ACCCCGCTGGAGCTGGTGCGACGGCCTGAGCGCTCACGCTCGGTGCAGGACCTCAGGGCTGTCGGAGAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CACTGCGCTGCAATCGGCTGGACAGCCGCTCCAGGGTaGAGCTCAGCCGCCTGCGCATCGCCAGCACCGGGG +
Preference number: 6 (lower is better)
Translates to: HCAAIGWTAAPG*SSAACASPAPG
Trigger: CCCCGGTGCTGGCGATGCGCAGGCGGCTGAGCTTCACCCTGGAGCGGCTGTCCAGCCGATTGCAGCGCAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CCTCGCTCAGTGGCGTCTGGGGTCGGGATTCCGCGGTaGCCGCCAGGGAGGGCCCGGACGACTTGGACTTCT +
Preference number: 6 (lower is better)
Translates to: PRSVASGVGIPR*PPGRARTTWTS
Trigger: AGAAGTCCAAGTCGTCCGGGCCCTCCCTGGCGGGCACCGCGGAATCCCGACCCCAGACGCCACTGAGCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS CCA 72 bp CCCACCCTCAGCCTCCTCCGCAAAGCGCCGCTGGTCTaGGCGCACGGGCTGGCGGTTTCTCAGCCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: PTLSLLRKAPLV*AHGLAVSQPGD
Trigger: GTCTCCTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGAGGAGGCTGAGGGTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS CCA 72 bp CACAGCCCACCCTCAGCCTCCTCCGCAAAGCGCCGCTaGTCTGGGCGCACGGGCTGGCGGTTTCTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: HSPPSASSAKRR*SGRTGWRFLSQ
Trigger: CTGGCTGAGAAACCGCCAGCCCGTGCGCCCAGACCAGCGGCGCTTTGCGGAGGAGGCTGAGGGTGGGCTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS CCA 72 bp GCTCTGGGCTGCGAGGGCCGGCAGCTAGCCAGAGACTaGTTCCTCGGGGTTCCTGGGCAGGCAGAGACCCCG +
Preference number: 6 (lower is better)
Translates to: ALGCEGRQLARD*FLGVPGQAETP
Trigger: CGGGGTCTCTGCCTGCCCAGGAACCCCGAGGAACCAGTCTCTGGCTAGCTGCCGGCCCTCGCAGCCCAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CAA 90 bp TCGCTGCGCTCCAGGCTGCGCCGTCGCTCCTCGAAGAACTGCAGCTaGTCCAGGATGCGGGAGCCGGCGCGCACCAGCCTAGGCGATCGG +
Preference number: 6 (lower is better)
Translates to: SLRSRLRRRSSKNCS*SRMREPARTSLGDR
Trigger: CCGATCGCCTAGGCTGGTGCGCGCCGGCTCCCGCATCCTGGACAAGCTGCAGTTCTTCGAGGAGCGACGGCGCAGCCTGGAGCGCAGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000498378.5
CDS CAA 90 bp GGGAGGGGAGGGACAGTGACACTGGGCCTGAGCCCGGAGGATACCTaGAGGGGTAGGCCCATGCCATCCCGGGCCTGGTCCCTCACCCCC +
Preference number: 6 (lower is better)
Translates to: GRGGTVTLGLSPEDT*RGRPMPSRAWSLTP
Trigger: GGGGGTGAGGGACCAGGCCCGGGATGGCATGGGCCTACCCCTCAAGGTATCCTCCGGGCTCAGGCCCAGTGTCACTGTCCCTCCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CAA 90 bp TGGGGTCGGGATTCCGCGGTGCCCGCCAGGGAGGGCCCGGACGACTaGGACTTCTTCCCTCGCTTCTCTTCGGTGGTGGTGTCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: WGRDSAVPAREGPDD*DFFPRFSSVVVSSG
Trigger: GCCCGAGGACACCACCACCGAAGAGAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTCCCTGGCGGGCACCGCGGAATCCCGACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS GCA 72 bp GCCCGCTGCCCCACCAGCTCACTTGCTCCTCTGAGGTaGCTGTCACGGAGGTCGGGGGTGTGTCCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: ARCPTSSLAPLR*LSRRSGVCPGR
Trigger: CCTCCCTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000435853.5
ENST00000452101.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp GCAGCTCGAGGTCTGAGGCCGGGCTGCGCTGACGCGTaGGCTCGTCCAGCGAGGCCGCTTTCTGCTGGAACA +
Preference number: 6 (lower is better)
Translates to: AARGLRPGCADA*ARPARPLSAGT
Trigger: TGTTCCAGCAGAAAGCGGCCTCGCTGGACGAGCGCACGCGTCAGCGCAGCCCGGCCTCAGACCTCGAGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS GCA 72 bp TCCAGGACCGTCTGCCCGCTGCCCCACCAGCTCACTTaGTCCTCTGAGGTGCCCGTGGGGGTGCTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: SRTVCPLPHQLT*SSEVPVGVLKA
Trigger: GGCCTTCAGCACCCCCACGGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451076.1
CDS GCA 72 bp CACTGCCCGCTTCCTGCTCCAGGACCGTCTGCCCGCTaGCCCACCAGCTCACTTGCTCCTCTGAGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: HCPLPAPGPSAR*PTSSLAPLRCP
Trigger: CGGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGAGCAGGAAGCGGGCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451076.1
CDS CCA 72 bp CGGCACAGGTGGCCTGGCCCAGCTCGTTGGTGGCGGTaGCCATATAGCTCCCGGCATCTGCTGCCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RHRWPGPARWWR*PYSSRHLLPWP
Trigger: AGGCCAGGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000462545.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp GTGAGGCGGCACAGGTGGCCTGGCCCAGCTCGTTGGTaGCGGTGGCCATATAGCTCCCGGCATCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: VRRHRWPGPARW*RWPYSSRHLLP
Trigger: GGGCAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCGCCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000462545.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp CCCGCCGCTTGCCCTCGGCAGCATAGGGCACGATCTTaGCCACGAACGTTCGCCCCGTGGCATTCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: PAACPRQHRARS*PRTFAPWHSPG
Trigger: GCCGGGAGAATGCCACGGGGCGAACGTTCGTGGCCAAGATCGTGCCCTATGCTGCCGAGGGCAAGCGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GCGGCGCAGCTTCATCAGGTAGGCGTCCTGCAACCATaGGTGGGCCAGGCAGTCCTGCAGGGAGGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: AAQLHQVGVLQP*VGQAVLQGGPA
Trigger: AGCCGGCCCTCCCTGCAGGACTGCCTGGCCCACCCATGGTTGCAGGACGCCTACCTGATGAAGCTGCGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp TGGGCTAGAGCAAGGACGCCCACGGTCCACGCACCATaGGTGAGTCGGCCAAAGGCCCGGCGGGAATGGCCG +
Preference number: 6 (lower is better)
Translates to: WARARTPTVHAP*VSRPKARREWP
Trigger: CGGCCATTCCCGCCGGGCCTTTGGCCGACTCACCCATGGTGCGTGGACCGTGGGCGTCCTTGCTCTAGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403148.6
ENST00000420132.5
ENST00000498378.5
CDS CAA 72 bp CGCAGCCCCAGCGACAGGGGCGACTCGCGGCTGCGCTaGAACTTGGCCTCGAACACGGCCTCCGACTCCAAG +
Preference number: 6 (lower is better)
Translates to: RSPSDRGDSRLR*NLASNTASDSK
Trigger: CTTGGAGTCGGAGGCCGTGTTCGAGGCCAAGTTCAAGCGCAGCCGCGAGTCGCCCCTGTCGCTGGGGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp CGCCGCCGCTGCTCGCCCAGGAACTCCTTGAGCCGGTaGGTGGTGAAGGTGAGCGTCTGGCGGCGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: RRRCSPRNSLSR*VVKVSVWRRSF
Trigger: GAAGCTGCGCCGCCAGACGCTCACCTTCACCACCAACCGGCTCAAGGAGTTCCTGGGCGAGCAGCGGCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CGTCTGCCCGCTGCCCCACCAGCTCACTTGCTCCTCTaGGGTGCCTGTCACGGAGGTCGGGGGTGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: RLPAAPPAHLLL*GACHGGRGCVQ
Trigger: CTGGACACACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000435853.5
ENST00000452101.1
ENST00000464989.5
ENST00000498378.5
CDS TCA 72 bp CGGGGATGGGGCGCAGCACCAGGTGGCATTTGTAGCTaGTCTGGGAGCGCTGCCACCTCCGCCGGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: RGWGAAPGGICS*SGSAATSAGRG
Trigger: TCCTCTCCCGGCGGAGGTGGCAGCGCTCCCAGATCAGCTACAAATGCCACCTGGTGCTGCGCCCCATCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp GCAGCCCCAGCGACAGGGGCGACTCGCGGCTGCGCTTaGACTTGGCCTCGAACACGGCCTCCGACTCCAAGT +
Preference number: 6 (lower is better)
Translates to: AAPATGATRGCA*TWPRTRPPTPS
Trigger: ACTTGGAGTCGGAGGCCGTGTTCGAGGCCAAGTTCAAGCGCAGCCGCGAGTCGCCCCTGTCGCTGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp GAGAGTCAGGAGGCCGGGCCCTGGCTGGCCTTGAGGTaGCAGGGGCCTCTTGGTGGGCAGCAGATGGCACAG +
Preference number: 6 (lower is better)
Translates to: ESQEAGPWLALR*QGPLGGQQMAQ
Trigger: CTGTGCCATCTGCTGCCCACCAAGAGGCCCCTGTCACCTCAAGGCCAGCCAGGGCCCGGCCTCCTGACTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp TCCAGGACCGTCTGCCCGCTGCCCCACCAGCTCACTTaGTCCTCTGAGGTGCCTGTCACGGAGGTCGGGGGT +
Preference number: 6 (lower is better)
Translates to: SRTVCPLPHQLT*SSEVPVTEVGG
Trigger: ACCCCCGACCTCCGTGACAGGCACCTCAGAGGAGCAAGTGAGCTGGTGGGGCAGCGGGCAGACGGTCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000435853.5
ENST00000452101.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp CTTTGCAGGAGACCTCACCCGCCAGGTTCTGGGCGGTaGAGGTGTAGACGCCTCCATCCTGGGCCCCCGTGC +
Preference number: 6 (lower is better)
Translates to: LCRRPHPPGSGR*RCRRLHPGPPC
Trigger: GCACGGGGGCCCAGGATGGAGGCGTCTACACCTGCACCGCCCAGAACCTGGCGGGTGAGGTCTCCTGCAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp TCTGTGAGGGACACCCGGGAGCCAGAGAACTCGGGCTaGAGTGGGCGGGGCACTGAGGGCAGCTCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SVRDTREPENSG*SGRGTEGSSSS
Trigger: GCTGGAAGAGCTGCCCTCAGTGCCCCGCCCACTGCAGCCCGAGTTCTCTGGCTCCCGGGTGTCCCTCACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp AGACTTAGGGGTACTGGGTTTGGGGGCGCTGGGCCGTaGAGGGCTGGATGGCTGGGCCTCGCTGAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: RLRGTGFGGAGP*RAGWLGLAEGR
Trigger: TCTGCCCTCAGCGAGGCCCAGCCATCCAGCCCTGCACGGCCCAGCGCCCCCAAACCCAGTACCCCTAAGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CCCATCCACTCGCCGCTCCAGCGTATACGTGCAAGGTaGCCGGCTGTCTCCCGGCTTCCACAGCACCAGCGC +
Preference number: 6 (lower is better)
Translates to: PIHSPLQRIRAR*PAVSRLPQHQR
Trigger: GCGCTGGTGCTGTGGAAGCCGGGAGACAGCCGGGCACCTTGCACGTATACGCTGGAGCGGCGAGTGGATGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp ACCCACCGGGTCTCACGGTCAGTGAGGCGGCACAGGTaGCCTGGCCCAGCTCGTTGGTGGCGGTGGCCATAT +
Preference number: 6 (lower is better)
Translates to: THRVSRSVRRHR*PGPARWWRWPY
Trigger: ATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCGCCTCACTGACCGTGAGACCCGGTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp GGCGGCCACGGCACAGCCAATCCACCTCCACGTCAGTaGGCCCCGCCACCAGGCACTCAAACAGCGCCATCT +
Preference number: 6 (lower is better)
Translates to: GGHGTANPPPRQ*APPPGTQTAPS
Trigger: AGATGGCGCTGTTTGAGTGCCTGGTGGCGGGGCCCACTGACGTGGAGGTGGATTGGCTGTGCCGTGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp TCCAGGCTGCGCCGTCGCTCCTCGAAGAACTGCAGCTaGTCCAGGATGCGGGAGCCGGCGCGCACCAGCCTA +
Preference number: 6 (lower is better)
Translates to: SRLRRRSSKNCS*SRMREPARTSL
Trigger: TAGGCTGGTGCGCGCCGGCTCCCGCATCCTGGACAAGCTGCAGTTCTTCGAGGAGCGACGGCGCAGCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000498378.5
CDS CAA 72 bp GGGACAGTGACACTGGGCCTGAGCCCGGAGGATACCTaGAGGGGTAGGCCCATGCCATCCCGGGCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: GTVTLGLSPEDT*RGRPMPSRAWS
Trigger: GGACCAGGCCCGGGATGGCATGGGCCTACCCCTCAAGGTATCCTCCGGGCTCAGGCCCAGTGTCACTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS TCA 72 bp CCCCTCGTCCTCGCTGCCCACATGGGCAATGTGCAGTaGGTGCAGACCCCCGTCCTGCCGCAGCCGCAAGTT +
Preference number: 6 (lower is better)
Translates to: PLVLAAHMGNVQ*VQTPVLPQPQV
Trigger: AACTTGCGGCTGCGGCAGGACGGGGGTCTGCACTCACTGCACATTGCCCATGTGGGCAGCGAGGACGAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp GCCAGCTCCAATGTGACCGAGCAGGTCTGTGTGCCGTaGCGGTTTCGGGCGGTGCAGGTGAGGGCCCCCATG +
Preference number: 6 (lower is better)
Translates to: ASSNVTEQVCVP*RFRAVQVRAPM
Trigger: CATGGGGGCCCTCACCTGCACCGCCCGAAACCGTCACGGCACACAGACCTGCTCGGTCACATTGGAGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS TCA 72 bp CTAGAGCAAGGACGCCCACGGTCCACGCACCATGGGTaGGTCGGCCAAAGGCCCGGCGGGAATGGCCGGTTT +
Preference number: 6 (lower is better)
Translates to: LEQGRPRSTHHG*VGQRPGGNGRF
Trigger: AAACCGGCCATTCCCGCCGGGCCTTTGGCCGACTCACCCATGGTGCGTGGACCGTGGGCGTCCTTGCTCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403148.6
ENST00000420132.5
ENST00000498378.5
CDS GCA 72 bp CACCTCCACATCTTCCAGCAGCCGTGTGAACAGGGGTaGCAACGAGGGCCGCACGGTCAGCCGGGCACTGCA +
Preference number: 6 (lower is better)
Translates to: HLHIFQQPCEQG*QRGPHGQPGTA
Trigger: TGCAGTGCCCGGCTGACCGTGCGGCCCTCGTTGGCACCCCTGTTCACACGGCTGCTGGAAGATGTGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GTGAGTGTGACCATCCTCCCCGTCACAGCCACCACCTaGGGGGCGCCATCTGGAGGGCCTGGGACCACATCT +
Preference number: 6 (lower is better)
Translates to: VSVTILPVTATT*GAPSGGPGTTS
Trigger: AGATGTGGTCCCAGGCCCTCCAGATGGCGCCCCGCAGGTGGTGGCTGTGACGGGGAGGATGGTCACACTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 72 bp GCGTGCCGCTTGCCCGCCCGGGGGATGCTGAGCAGCTaGCGCCCATCTTTGCAGGACACGATGATCACTGAG +
Preference number: 6 (lower is better)
Translates to: ACRLPARGMLSS*RPSLQDTMITE
Trigger: CTCAGTGATCATCGTGTCCTGCAAAGATGGGCGGCAGCTGCTCAGCATCCCCCGGGCGGGCAAGCGGCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp TCCGCAGCACCTCGTACTCCTGCAGGACCCGCCGCTTaGCCTCGGCAGCATAGGGCACGATCTTGGCCACGA +
Preference number: 6 (lower is better)
Translates to: SAAPRTPAGPAA*PRQHRARSWPR
Trigger: TCGTGGCCAAGATCGTGCCCTATGCTGCCGAGGGCAAGCGGCGGGTCCTGCAGGAGTACGAGGTGCTGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTGCTCACTCTCT +
Preference number: 6 (lower is better)
Translates to: RWPVEAEGRAPP*ATRSEGRCSLS
Trigger: AGAGAGTGAGCAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491248.1
CDS CCA 72 bp CACTCCTGGATGGCTCTGCTCCGGGTCAGCGGGAATTaGTCCCGACGCCTAACCTCCTGCTGCGGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: HSWMALLRVSGN*SRRLTSCCGPS
Trigger: GGAAGGCCCGCAGCAGGAGGTTAGGCGTCGGGACCAATTCCCGCTGACCCGGAGCAGAGCCATCCAGGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp TCAGTGAGGCGGCACAGGTGGCCTGGCCCAGCTCGTTaGTGGCGGTGGCCATATAGCTCCCGGCATCTGCTG +
Preference number: 6 (lower is better)
Translates to: SVRRHRWPGPAR*WRWPYSSRHLL
Trigger: CAGCAGATGCCGGGAGCTATATGGCCACCGCCACCAACGAGCTGGGCCAGGCCACCTGTGCCGCCTCACTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000462545.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CCA 72 bp TCGCGGCCAGGTCTCCCCAGGCTCTGGGAACTCCTCTaGGGGGCTCAGGTATTCCTCGTCGGAGGTGATGGG +
Preference number: 6 (lower is better)
Translates to: SRPGLPRLWELL*GAQVFLVGGDG
Trigger: CCCATCACCTCCGACGAGGAATACCTGAGCCCCCCAGAGGAGTTCCCAGAGCCTGGGGAGACCTGGCCGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS CCA 72 bp GTGACCAGTGCCGTCCACTGGTCCGAGCCCAGCACCTaGTGCTGCACTGTGTACGTCAGGGAGTCCGGGTCG +
Preference number: 6 (lower is better)
Translates to: VTSAVHWSEPST*CCTVYVRESGS
Trigger: CGACCCGGACTCCCTGACGTACACAGTGCAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 72 bp CCTCATGGAAGTAGAGGACACAGTCGTGCTGGAGCCTaGCCAGCAGCCGGGCCTCCCGACGCGCTGATGCCT +
Preference number: 6 (lower is better)
Translates to: PHGSRGHSRAGA*PAAGPPDALMP
Trigger: AGGCATCAGCGCGTCGGGAGGCCCGGCTGCTGGCCAGGCTCCAGCACGACTGTGTCCTCTACTTCCATGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GTGGTGCAGGCTTGGAGGCTCGGACTGGTTCTGGCCTaGGCTCTGGAGCCTTGTCTTGGGCAGGCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: VVQAWRLGLVLA*ALEPCLGQAGV
Trigger: CACCCCAGCCTGCCCAAGACAAGGCTCCAGAGCCCAGGCCAGAACCAGTCCGAGCCTCCAAGCCTGCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp TGGCATTGGTGGGAACCCCAGTTGAAGCCCGAGGCCTaGCTGTGGTCCGTGCCTCTAGGGGCCGCCAGGGTA +
Preference number: 6 (lower is better)
Translates to: WHWWEPQLKPEA*LWSVPLGAARV
Trigger: TACCCTGGCGGCCCCTAGAGGCACGGACCACAGCCAGGCCTCGGGCTTCAACTGGGGTTCCCACCAATGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp GATTCCGCGGTGCCCGCCAGGGAGGGCCCGGACGACTaGGACTTCTTCCCTCGCTTCTCTTCGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: DSAVPAREGPDD*DFFPRFSSVVV
Trigger: CACCACCACCGAAGAGAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTCCCTGGCGGGCACCGCGGAATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS CAA 72 bp GCACTCCTGGATGGCTCTGCTCCGGGTCAGCGGGAATaGGTCCCGACGCCTAACCTCCTGCTGCGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: ALLDGSAPGQRE*VPTPNLLLRAF
Trigger: GAAGGCCCGCAGCAGGAGGTTAGGCGTCGGGACCAATTCCCGCTGACCCGGAGCAGAGCCATCCAGGAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000464989.5
ENST00000485813.5
ENST00000498378.5
CDS CAA 90 bp TCCCGACGCGCTGATGCCTTTGGCTTGGCCTGGCTGGGGATGAACTaGGCCGCAAACTCCAGGCCGGAGCTACGCTCCACTATGCGCCGC +
Preference number: 6 (lower is better)
Translates to: SRRADAFGLAWLGMN*AANSRPELRSTMRR
Trigger: GCGGCGCATAGTGGAGCGTAGCTCCGGCCTGGAGTTTGCGGCCAAGTTCATCCCCAGCCAGGCCAAGCCAAAGGCATCAGCGCGTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp AACTCCTCCTGGACGCTGGCAGAGAGGTTTGGTGGCGATAACCCCTaGTCCTTCCGCGGCCGAGAGAAGCCCCAGCGGAGCCGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: NSSWTLAERFGGDNP*SFRGREKPQRSRLR
Trigger: CCGAAGCCGGCTCCGCTGGGGCTTCTCTCGGCCGCGGAAGGACAAGGGGTTATCGCCACCAAACCTCTCTGCCAGCGTCCAGGAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp CTGGGAGAGCTTCGGGGACTGCTCCCAGGGGAGCTGACCACCTCCTaGGCCGGGCTGAGGCTCTGCACAGTCACCTTGGTAGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: LGELRGLLPGELTTS*AGLRLCTVTLVGSG
Trigger: TCCTGAGCCTACCAAGGTGACTGTGCAGAGCCTCAGCCCGGCCAAGGAGGTGGTCAGCTCCCCTGGGAGCAGTCCCCGAAGCTCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CGCTGCTCTGGATGCGGTGGCCATTGTGGAACCAGCTaGTGGTGGGGTAGGGCAGGCCGGTCACCTGGCACT +
Preference number: 6 (lower is better)
Translates to: RCSGCGGHCGTS*WWGRAGRSPGT
Trigger: AGTGCCAGGTGACCGGCCTGCCCTACCCCACCATCAGCTGGTTCCACAATGGCCACCGCATCCAGAGCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CACAGCTGTGCTCACCCTGGCACCCTAGGGTCCCTGTaGTGCTCCAAGCCTAAGCCACCCCAAGGGCCCCTC +
Preference number: 6 (lower is better)
Translates to: HSCAHPGTLGSL*CSKPKPPQGPL
Trigger: GAGGGGCCCTTGGGGTGGCTTAGGCTTGGAGCATCACAGGGACCCTAGGGTGCCAGGGTGAGCACAGCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS TCA 72 bp GTGGGGTTGGACCCCAGCAGGCCCGATCCCAAAGCCTaGGCTTCAGCCACCGTGCCCTGCTGCTTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: VGLDPSRPDPKA*ASATVPCCFQE
Trigger: CTCCTGAAAGCAGCAGGGCACGGTGGCTGAAGCTCAGGCTTTGGGATCGGGCCTGCTGGGGTCCAACCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 72 bp ACCAGTGCCGTCCACTGGTCCGAGCCCAGCACCTGGTaGTGCACTGTGTACGTCAGGGAGTCCGGGTCGATG +
Preference number: 6 (lower is better)
Translates to: TSAVHWSEPSTW*CTVYVRESGSM
Trigger: CATCGACCCGGACTCCCTGACGTACACAGTGCAGCACCAGGTGCTGGGCTCGGACCAGTGGACGGCACTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 72 bp CGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTCACTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: RWPVEAEGRAPP*ATRSEGRSLSS
Trigger: AGAAGAGAGTGAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485813.5
CDS GCA 72 bp CGCTGGCCAGTTGAGGCTGAAGGTCGGGCTCCTCCCTaGGCAACCCGCTCTGAGGGACGCTGTCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RWPVEAEGRAPP*ATRSEGRCLFS
Trigger: AGAGAAGAGACAGCGTCCCTCAGAGCGGGTTGCGCAGGGAGGAGCCCGACCTTCAGCCTCAACTGGCCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497065.1
CDS CCA 72 bp ATTCCGCGGTGCCCGCCAGGGAGGGCCCGGACGACTTaGACTTCTTCCCTCGCTTCTCTTCGGTGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: IPRCPPGRARTT*TSSLASLRWWC
Trigger: ACACCACCACCGAAGAGAAGCGAGGGAAGAAGTCCAAGTCGTCCGGGCCCTCCCTGGCGGGCACCGCGGAAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS CCA 72 bp CCTTGGAGCCAGTGTCAGAAGAACGGCGGTTCTGGCTaGGACTGGGCTTCATGGTGGGGGTTCGCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PWSQCQKNGGSG*DWASWWGFAAR
Trigger: CCTGGCCGCGAACCCCCACCATGAAGCCCAGTCCCAGCCAGAACCGCCGTTCTTCTGACACTGGCTCCAAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS CCA 72 bp CCTCGGCAGCTCCTCCAGACGACCTGGGCCTCCACATaGTTGAATGTGACGGTGACGCTGGCAGGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: PRQLLQTTWAST*LNVTVTLAGCP
Trigger: GGGACAGCCTGCCAGCGTCACCGTCACATTCAACCATGTGGAGGCCCAGGTCGTCTGGAGGAGCTGCCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp CACGGCAGGGAACACCAAGCGATGGACATCCCTGTCTaGGAGGGGAGGGACAGTGACACTGGGCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: HGREHQAMDIPV*EGRDSDTGPEP
Trigger: GGGCTCAGGCCCAGTGTCACTGTCCCTCCCCTCCCAGACAGGGATGTCCATCGCTTGGTGTTCCCTGCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CAA 72 bp CCCAGCGACAGGGGCGACTCGCGGCTGCGCTTGAACTaGGCCTCGAACACGGCCTCCGACTCCAAGTTTTCG +
Preference number: 6 (lower is better)
Translates to: PSDRGDSRLRLN*ASNTASDSKFS
Trigger: CGAAAACTTGGAGTCGGAGGCCGTGTTCGAGGCCAAGTTCAAGCGCAGCCGCGAGTCGCCCCTGTCGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp TGGACGCTGGCAGAGAGGTTTGGTGGCGATAACCCCTaGTCCTTCCGCGGCCGAGAGAAGCCCCAGCGGAGC +
Preference number: 6 (lower is better)
Translates to: WTLAERFGGDNP*SFRGREKPQRS
Trigger: GCTCCGCTGGGGCTTCTCTCGGCCGCGGAAGGACAAGGGGTTATCGCCACCAAACCTCTCTGCCAGCGTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp CCCGCCCGGGGGATGCTGAGCAGCTGCCGCCCATCTTaGCAGGACACGATGATCACTGAGGGCTCTGACCTC +
Preference number: 6 (lower is better)
Translates to: PARGMLSSCRPS*QDTMITEGSDL
Trigger: GAGGTCAGAGCCCTCAGTGATCATCGTGTCCTGCAAAGATGGGCGGCAGCTGCTCAGCATCCCCCGGGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp CTTCGTGGAGGGGTTTGGGGTGGTGGACCCACAGCCTaGAGCGAGGACAAGGCCTGGCTAGGAGGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: LRGGVWGGGPTA*SEDKAWLGGVG
Trigger: CCCCACACCTCCTAGCCAGGCCTTGTCCTCGCTCAAGGCTGTGGGTCCACCACCCCAAACCCCTCCACGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp GGCTGCTCCTGCCAGTTACCATGTCCAGGCCATCCCTaGAGCCTCCACCACAGGGCCCCCATTCCCCATCCC +
Preference number: 6 (lower is better)
Translates to: GCSCQLPCPGHP*SLHHRAPIPHP
Trigger: GGGATGGGGAATGGGGGCCCTGTGGTGGAGGCTCAAGGGATGGCCTGGACATGGTAACTGGCAGGAGCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CAA 90 bp AGGGCCCCTCGGCAGCTCCTCCAGACGACCTGGGCCTCCACATGGTaGAATGTGACGGTGACGCTGGCAGGCTGTCCCTCCACCACATAC +
Preference number: 6 (lower is better)
Translates to: RAPRQLLQTTWASTW*NVTVTLAGCPSTTY
Trigger: GTATGTGGTGGAGGGACAGCCTGCCAGCGTCACCGTCACATTCAACCATGTGGAGGCCCAGGTCGTCTGGAGGAGCTGCCGAGGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp GGAGTGGAGGCTGGGATCGGGGTCCCAGTGTCAAGGACGAAAGGCTaGGGCTCACTTGGGGTGACGTGGGTACTGGGTAGGGTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: GVEAGIGVPVSRTKG*GSLGVTWVLGRVGS
Trigger: GGAGCCCACCCTACCCAGTACCCACGTCACCCCAAGTGAGCCCAAGCCTTTCGTCCTTGACACTGGGACCCCGATCCCAGCCTCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CTGGGACTCGGGCCACAGCCACGGTACAGGAGCTGGTaGTGCTGCCCAGTACGTTGGTGGCCGAGCACTCAT +
Preference number: 6 (lower is better)
Translates to: LGLGPQPRYRSW*CCPVRWWPSTH
Trigger: ATGAGTGCTCGGCCACCAACGTACTGGGCAGCATCACCAGCTCCTGTACCGTGGCTGTGGCCCGAGTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp GGCAGGGCATGGAGGGCAGTCAAGACAGAAGGGGCGTaGGGCACCCAGTCCCCAGAGGTGTCCTGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: GRAWRAVKTEGA*GTQSPEVSCGN
Trigger: ATTGCCACAGGACACCTCTGGGGACTGGGTGCCTCACGCCCCTTCTGTCTTGACTGCCCTCCATGCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS TCA 72 bp CTGCGGGGCGCCATCTGGAGGGCCTGGGACCACATCTaGAAGCCGCAGTTCGAATGTCTGCTGGGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: LRGAIWRAWDHI*KPQFECLLGPR
Trigger: CCTTGGACCCAGCAGACATTCGAACTGCGGCTTTCAGATGTGGTCCCAGGCCCTCCAGATGGCGCCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 72 bp TCGTCCTCGCTGCCCACATGGGCAATGTGCAGTGAGTaGAGACCCCCGTCCTGCCGCAGCCGCAAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: SSSLPTWAMCSE*RPPSCRSRKFS
Trigger: TGAGAACTTGCGGCTGCGGCAGGACGGGGGTCTGCACTCACTGCACATTGCCCATGTGGGCAGCGAGGACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CTGCTCTTGACAGTGGTGCTGAGGACCCGGAAGATGTaGTGGACCCCCTTACGCAGCCCTGTGGCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: LLLTVVLRTRKM*WTPLRSPVAAH
Trigger: GTGGGCAGCCACAGGGCTGCGTAAGGGGGTCCAGCACATCTTCCGGGTCCTCAGCACCACTGTCAAGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS GCA 72 bp AGCTCCTGGGCATTCCCAAAGTCACAGATCCGCACCTaGTGCTCGCCCGCAGCACCATCCCACACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSWAFPKSQIRT*CSPAAPSHTSR
Trigger: CCTGCTGGTGTGGGATGGTGCTGCGGGCGAGCAGCAGGTGCGGATCTGTGACTTTGGGAATGCCCAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CACATACACGCACGCATGCGCACGCACACGCACACATaGACGCACAGGCACGCAGACCTGGCTAGGGCCCTT +
Preference number: 6 (lower is better)
Translates to: HIHARMRTHTHT*THRHADLARAL
Trigger: AAGGGCCCTAGCCAGGTCTGCGTGCCTGTGCGTGCATGTGTGCGTGTGCGTGCGCATGCGTGCGTGTATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CCA 72 bp CTCTTGACAGTGGTGCTGAGGACCCGGAAGATGTGCTaGACCCCCTTACGCAGCCCTGTGGCTGCCCACCCT +
Preference number: 6 (lower is better)
Translates to: LLTVVLRTRKMC*TPLRSPVAAHP
Trigger: AGGGTGGGCAGCCACAGGGCTGCGTAAGGGGGTCCAGCACATCTTCCGGGTCCTCAGCACCACTGTCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 72 bp GCGAGAGGAGAGGGGGAGGGGGATGAGGGAGGGTCCTaGGCAGAGCAGGGTGACAAAGGCTCAGAAGAGTGT +
Preference number: 6 (lower is better)
Translates to: ARGEGEGDEGGS*AEQGDKGSEEC
Trigger: ACACTCTTCTGAGCCTTTGTCACCCTGCTCTGCCCAGGACCCTCCCTCATCCCCCTCCCCCTCTCCTCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CAA 72 bp ACGGGCTGGCGGTTTCTCAGCCAGGAGACCACAGGCTaGGGCTCCCCCTGCACGCGGATGCTCATGATGACA +
Preference number: 6 (lower is better)
Translates to: TGWRFLSQETTG*GSPCTRMLMMT
Trigger: TGTCATCATGAGCATCCGCGTGCAGGGGGAGCCCAAGCCTGTGGTCTCCTGGCTGAGAAACCGCCAGCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS CAA 72 bp GTCCAGGTAACAACAGGGGGCGGGGTGCCACTGATCTaGCAGTCGAAACGGGCAGCTCGGCCCTCCAACACC +
Preference number: 6 (lower is better)
Translates to: VQVTTGGGVPLI*QSKRAARPSNT
Trigger: GGTGTTGGAGGGCCGAGCTGCCCGTTTCGACTGCAAGATCAGTGGCACCCCGCCCCCTGTTGTTACCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp GCACGTACTGGTGACCCAACTCCTCCTGGACGCTGGCAGAGAGGTTaGGTGGCGATAACCCCTTGTCCTTCCGCGGCCGAGAGAAGCCCC +
Preference number: 6 (lower is better)
Translates to: ARTGDPTPPGRWQRG*VAITPCPSAAERSP
Trigger: GGGGCTTCTCTCGGCCGCGGAAGGACAAGGGGTTATCGCCACCAAACCTCTCTGCCAGCGTCCAGGAGGAGTTGGGTCACCAGTACGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp TGCCGCTTGCCCGCCCGGGGGATGCTGAGCAGCTGCCGCCCATCTTaGCAGGACACGATGATCACTGAGGGCTCTGACCTCAAGGACTTC +
Preference number: 6 (lower is better)
Translates to: CRLPARGMLSSCRPS*QDTMITEGSDLKDF
Trigger: GAAGTCCTTGAGGTCAGAGCCCTCAGTGATCATCGTGTCCTGCAAAGATGGGCGGCAGCTGCTCAGCATCCCCCGGGCGGGCAAGCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp GGGAAAGGGGCCCACCTCCTCCAGACGACCTGGGCCTCCACATGGTaGAATGTGACGGTGACGCTGGCAGGCTGTCCCTCCACCACATAC +
Preference number: 6 (lower is better)
Translates to: GKGAHLLQTTWASTW*NVTVTLAGCPSTTY
Trigger: GTATGTGGTGGAGGGACAGCCTGCCAGCGTCACCGTCACATTCAACCATGTGGAGGCCCAGGTCGTCTGGAGGAGGTGGGCCCCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CAA 90 bp GCAACCCGCTCTGAGGGACGCTGCTCACTCTCTTCTCTCTCCTGCTaGCTGGCTTGTTCCCCTGCTCTCTCCTGCTCTCCCGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: ATRSEGRCSLSSLSC*LACSPALSCSPGSC
Trigger: GCAGCTCCCGGGAGAGCAGGAGAGAGCAGGGGAACAAGCCAGCAAGCAGGAGAGAGAAGAGAGTGAGCAGCGTCCCTCAGAGCGGGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491248.1
CDS CAA 90 bp ACCCGCTCTGAGGGACGCTGTCTCTTCTCTCTCCTGCTTGCTGGCTaGTTCCCCTGCTCTCTCCTGCTCTCCCGGGAGCTGCCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: TRSEGRCLFSLLLAG*FPCSLLLSRELPCG
Trigger: TCCACACGGCAGCTCCCGGGAGAGCAGGAGAGAGCAGGGGAACAAGCCAGCAAGCAGGAGAGAGAAGAGACAGCGTCCCTCAGAGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497065.1
CDS TCA 72 bp CCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCTCTGAGTCTCCGACCT +
Preference number: 6 (lower is better)
Translates to: PEAPGAGFPAHR*CHPQPSLSLRP
Trigger: AGGTCGGAGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312358.12
CDS TCA 72 bp GGCGGCTGTCCGGGGCTCTTCTACATACAGCTGGGCTaGGCAGTGGGCCTGGCCATGGGTGTTAACAGCACT +
Preference number: 6 (lower is better)
Translates to: GGCPGLFYIQLG*AVGLAMGVNST
Trigger: AGTGCTGTTAACACCCATGGCCAGGCCCACTGCTCAGCCCAGCTGTATGTAGAAGAGCCCCGGACAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CCTGGAGCAGCATGGCTAGGACGCCCATTTCTTGGGTaGGCTGGGCCTGGTGCAGAGGAACACACACCGCAG +
Preference number: 6 (lower is better)
Translates to: PGAAWLGRPFLG*AGPGAEEHTPQ
Trigger: CTGCGGTGTGTGTTCCTCTGCACCAGGCCCAGCTCACCCAAGAAATGGGCGTCCTAGCCATGCTGCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS GCA 72 bp ACATGGGCAATGTGCAGTGAGTGCAGACCCCCGTCCTaGCGCAGCCGCAAGTTCTCACTCTCCTCCATGGGG +
Preference number: 6 (lower is better)
Translates to: TWAMCSECRPPS*RSRKFSLSSMG
Trigger: CCCCATGGAGGAGAGTGAGAACTTGCGGCTGCGGCAGGACGGGGGTCTGCACTCACTGCACATTGCCCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp TGGCCGCAAACTCCAGGCCGGAGCTACGCTCCACTATaGGCCGCAAGTAGGAGAAAGCACCCCTGCCGATCT +
Preference number: 6 (lower is better)
Translates to: WPQTPGRSYAPL*AASRRKHPCRS
Trigger: AGATCGGCAGGGGTGCTTTCTCCTACTTGCGGCGCATAGTGGAGCGTAGCTCCGGCCTGGAGTTTGCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp TCCTGGGCATTCCCAAAGTCACAGATCCGCACCTGCTaGTCGCCCGCAGCACCATCCCACACCAGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SWAFPKSQIRTC*SPAAPSHTSRF
Trigger: GAACCTGCTGGTGTGGGATGGTGCTGCGGGCGAGCAGCAGGTGCGGATCTGTGACTTTGGGAATGCCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GCTCACTCGCCTCGGACCTCCAAGCGGGCCTCGCACTaGCGAGCACCATACTCATTGACCGCTTTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: AHSPRTSKRASH*RAPYSLTALQV
Trigger: CACTTGCAAAGCGGTCAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTTGGAGGTCCGAGGCGAGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000475921.1
ENST00000498378.5
CDS GCA 72 bp ACGCAGACCTGGCTAGGGCCCTTCTGCATAGAGGGCTaGCTCTCACACCGTCAGGGCAGCACTGCCACTCTT +
Preference number: 6 (lower is better)
Translates to: TQTWLGPFCIEG*LSHRQGSTATL
Trigger: AAGAGTGGCAGTGCTGCCCTGACGGTGTGAGAGGCAGCCCTCTATGCAGAAGGGCCCTAGCCAGGTCTGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS GCA 72 bp CAAGGATGGGGCAGGCAGCAAGAAGTGCATCCATGGTaGAGCAAAGTCTGGGTCTGGGCCCGGGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: QGWGRQQEVHPW*SKVWVWARAGF
Trigger: GAAGCCAGCCCGGGCCCAGACCCAGACTTTGCTGCACCATGGATGCACTTCTTGCTGCCTGCCCCATCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 72 bp AGTGTACAGATGGGCCAAGGTCCCGCCCGGCTAGGCTaGTCCTGCCAGTTACCATGTCCAGGCCATCCCTTG +
Preference number: 6 (lower is better)
Translates to: SVQMGQGPARLG*SCQLPCPGHPL
Trigger: CAAGGGATGGCCTGGACATGGTAACTGGCAGGAGCAGCCTAGCCGGGCGGGACCTTGGCCCATCTGTACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CCA 72 bp CGGACGACTTGGACTTCTTCCCTCGCTTCTCTTCGGTaGTGGTGTCCTCGGGCAGCACAGGCTCCTGAGTGC +
Preference number: 6 (lower is better)
Translates to: RTTWTSSLASLR*WCPRAAQAPEC
Trigger: GCACTCAGGAGCCTGTGCTGCCCGAGGACACCACCACCGAAGAGAAGCGAGGGAAGAAGTCCAAGTCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS CCA 72 bp CCTGAGGCGGCTGTCCGGGGCTCTTCTACATACAGCTaGGCTGAGCAGTGGGCCTGGCCATGGGTGTTAACA +
Preference number: 6 (lower is better)
Translates to: PEAAVRGSSTYS*AEQWAWPWVLT
Trigger: TGTTAACACCCATGGCCAGGCCCACTGCTCAGCCCAGCTGTATGTAGAAGAGCCCCGGACAGCCGCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp CCTCCACCACATACACGATGTCTGGTTTGTCCAGCATaGCAGGGGCCTCCTCCAGGGTTGGGCCGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: PPPHTRCLVCPA*QGPPPGLGRAP
Trigger: TGGAGCACGGCCCAACCCTGGAGGAGGCCCCTGCCATGCTGGACAAACCAGACATCGTGTATGTGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp CACCCGGCAGATCCGAAGACAGTACTGGTCATCATCTaGCTGGCTCAGCTCGTACACACCGGCCCGTGCCTC +
Preference number: 6 (lower is better)
Translates to: HPADPKTVLVII*LAQLVHTGPCL
Trigger: GAGGCACGGGCCGGTGTGTACGAGCTGAGCCAGCCAGATGATGACCAGTACTGTCTTCGGATCTGCCGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 72 bp TCCCGGCGGCTCACCCGGCAGATCCGAAGACAGTACTaGTCATCATCTGGCTGGCTCAGCTCGTACACACCG +
Preference number: 6 (lower is better)
Translates to: SRRLTRQIRRQY*SSSGWLSSYTP
Trigger: CGGTGTGTACGAGCTGAGCCAGCCAGATGATGACCAGTACTGTCTTCGGATCTGCCGGGTGAGCCGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 72 bp CATAGGGCACGATCTTGGCCACGAACGTTCGCCCCGTaGCATTCTCCCGGCACGCTCGCACAACACCAAAGC +
Preference number: 6 (lower is better)
Translates to: HRARSWPRTFAP*HSPGTLAQHQS
Trigger: GCTTTGGTGTTGTGCGAGCGTGCCGGGAGAATGCCACGGGGCGAACGTTCGTGGCCAAGATCGTGCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GGGGAACACAGCCAGAGAGCAGCAAAGCTGAGGTTGTaGGGTTGGACCCCAGCAGGCCCGATCCCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: GEHSQRAAKLRL*GWTPAGPIPKP
Trigger: AGGCTTTGGGATCGGGCCTGCTGGGGTCCAACCCCACAACCTCAGCTTTGCTGCTCTCTGGCTGTGTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CAA 90 bp AGGGTCTCTTCTGCGGTAGGTCTCAGCCGGTCCTGCACCAACACTTaGATGAGGAAGCCCCGGGCCTCCCTGCTCAGGCTCAGGAATGTG +
Preference number: 6 (lower is better)
Translates to: RVSSAVGLSRSCTNT*MRKPRASLLRLRNV
Trigger: CACATTCCTGAGCCTGAGCAGGGAGGCCCGGGGCTTCCTCATCAAAGTGTTGGTGCAGGACCGGCTGAGACCTACCGCAGAAGAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp AAGACCTTCTCAGAAGAGTTGCTGAAGGGCCCCTGCCCAGCACGGTaGGCACAGGCCACACGGAACCTCACAGTCACGCCAACTGGCAGG +
Preference number: 6 (lower is better)
Translates to: KTFSEELLKGPCPAR*AQATRNLTVTPTGR
Trigger: CCTGCCAGTTGGCGTGACTGTGAGGTTCCGTGTGGCCTGTGCCAACCGTGCTGGGCAGGGGCCCTTCAGCAACTCTTCTGAGAAGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp GCCGTACAGGTCACTGGCCACGGAAAGGCTATCCTCTaGCCCCCAGCTTGCGCCCACCAGATTAGCTCGAGA +
Preference number: 6 (lower is better)
Translates to: AVQVTGHGKAIL*PPACAHQISSR
Trigger: TCTCGAGCTAATCTGGTGGGCGCAAGCTGGGGGTCAGAGGATAGCCTTTCCGTGGCCAGTGACCTGTACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000409595.2
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp GTGGATAGAGAGCGCCCGTCCTCTGTACAGGCTGAATaGGCTGCCGTACAGGTCACTGGCCACGGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: VDRERPSSVQAE*AAVQVTGHGKA
Trigger: AGCCTTTCCGTGGCCAGTGACCTGTACGGCAGCGCATTCAGCCTGTACAGAGGACGGGCGCTCTCTATCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000409595.2
ENST00000451076.1
ENST00000464989.5
ENST00000498378.5
CDS GCA 72 bp TCAGGGTGTGCTCGGACCTCCAAGCGGGCCTCGCACTaGCGAGCACCATACTCATTGACCGCTTTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: SGCARTSKRASH*RAPYSLTALQV
Trigger: CACTTGCAAAGCGGTCAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTTGGAGGTCCGAGCACACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CTGCGGAGCATCACTAGGTGTGGTGGCAGAAGGTTCTaGAGACTTAGGGGTACTGGGTTTGGGGGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: LRSITRCGGRRF*RLRGTGFGGAG
Trigger: CCCAGCGCCCCCAAACCCAGTACCCCTAAGTCTGCAGAACCTTCTGCCACCACACCTAGTGATGCTCCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GGACACAGGAATAACGGGGTAAGGGGCCATGATCCCTaGAGGGATGACAGCGGGAGAGAGAGTCCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: GHRNNGVRGHDP*RDDSGRESPGG
Trigger: GCCACCAGGACTCTCTCTCCCGCTGTCATCCCTGCAGGGATCATGGCCCCTTACCCCGTTATTCCTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS GCA 72 bp ACCAGACTCTCCCCACCGCTACCTCACAGTAGCTTCTaGACAGCAATGGGATGGGAGGGTGGGCAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: TRLSPPLPHSSF*TAMGWEGGQRG
Trigger: GCCCCTTTGCCCACCCTCCCATCCCATTGCTGTGCAGAAGCTACTGTGAGGTAGCGGTGGGGAGAGTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS GCA 72 bp GCCACACACACACATGCACACACACACACACACACCTaGTTGTGTCCAGTCCAGCCGCAGACCTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: ATHTHAHTHTHT*LCPVQPQTWAS
Trigger: GGAGGCCCAGGTCTGCGGCTGGACTGGACACAAGCAGGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 72 bp ACGACTTGGACTTCTTCCCTCGCTTCTCTTCGGTGGTaGTGTCCTCGGGCAGCACAGGCTCCTGAGTGCGAC +
Preference number: 6 (lower is better)
Translates to: TTWTSSLASLRW*CPRAAQAPECD
Trigger: GTCGCACTCAGGAGCCTGTGCTGCCCGAGGACACCACCACCGAAGAGAAGCGAGGGAAGAAGTCCAAGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000312358.12
ENST00000396698.5
ENST00000431523.5
ENST00000464989.5
ENST00000485813.5
ENST00000491248.1
ENST00000497065.1
ENST00000498378.5
CDS CCA 72 bp TCCCTGTACTGTGTCATGCGCCGGTCGTCGCTGCTCTaGATGCGGTGGCCATTGTGGAACCAGCTGATGGTG +
Preference number: 6 (lower is better)
Translates to: SLYCVMRRSSLL*MRWPLWNQLMV
Trigger: CACCATCAGCTGGTTCCACAATGGCCACCGCATCCAGAGCAGCGACGACCGGCGCATGACACAGTACAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp CGGCAGATCCGAAGACAGTACTGGTCATCATCTGGCTaGCTCAGCTCGTACACACCGGCCCGTGCCTCTAGG +
Preference number: 6 (lower is better)
Translates to: RQIRRQYWSSSG*LSSYTPARASR
Trigger: CCTAGAGGCACGGGCCGGTGTGTACGAGCTGAGCCAGCCAGATGATGACCAGTACTGTCTTCGGATCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS CCA 72 bp AGGCCCGGATCTCAGACTCACACACGGTGGGTTTCCTaGCGATTCGCTCCAGCAGCTCCTCTGTGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: RPGSQTHTRWVS*RFAPAAPLCRA
Trigger: AGCTCTGCACAGAGGAGCTGCTGGAGCGAATCGCCAGGAAACCCACCGTGTGTGAGTCTGAGATCCGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GCCGCATATAGGCCCGGATCTCAGACTCACACACGGTaGGTTTCCTGGCGATTCGCTCCAGCAGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: AAYRPGSQTHTR*VSWRFAPAAPL
Trigger: CAGAGGAGCTGCTGGAGCGAATCGCCAGGAAACCCACCGTGTGTGAGTCTGAGATCCGGGCCTATATGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GGAAGCCCCGGGCCTCCCTGCTCAGGCTCAGGAATGTaGTCTCCTCGAAGGCCACGTTGTAGTTTCGGATGT +
Preference number: 6 (lower is better)
Translates to: GSPGPPCSGSGM*SPRRPRCSFGC
Trigger: ACATCCGAAACTACAACGTGGCCTTCGAGGAGACCACATTCCTGAGCCTGAGCAGGGAGGCCCGGGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GGGAATGGCCGGTTTTCTCCTCCCGCGGGGCCTCTCTaGAAGGTCAGCAGCATCTCGACTTGCTCATTCCAC +
Preference number: 6 (lower is better)
Translates to: GNGRFSPPAGPL*KVSSISTCSFH
Trigger: GTGGAATGAGCAAGTCGAGATGCTGCTGACCTTCCAGAGAGGCCCCGCGGGAGGAGAAAACCGGCCATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435853.5
CDS CCA 72 bp GAACCCTGGAGCAGCATGGCTAGGACGCCCATTTCTTaGGTGAGCTGGGCCTGGTGCAGAGGAACACACACC +
Preference number: 6 (lower is better)
Translates to: EPWSSMARTPIS*VSWAWCRGTHT
Trigger: GGTGTGTGTTCCTCTGCACCAGGCCCAGCTCACCCAAGAAATGGGCGTCCTAGCCATGCTGCTCCAGGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS CCA 72 bp GAGGGGCCACTCCTGGGCCTGGTGGGAGAATTCCACTaGAGCAGGGCACCCACATTCCTGACATGGACTAGA +
Preference number: 6 (lower is better)
Translates to: EGPLLGLVGEFH*SRAPTFLTWTR
Trigger: TCTAGTCCATGTCAGGAATGTGGGTGCCCTGCTCCAGTGGAATTCTCCCACCAGGCCCAGGAGTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS CCA 72 bp GGGACCACATCTGAAAGCCGCAGTTCGAATGTCTGCTaGGTCCAAGGGCCCAACAGCCCCACAGGATCACCG +
Preference number: 6 (lower is better)
Translates to: GTTSESRSSNVC*VQGPNSPTGSP
Trigger: CGGTGATCCTGTGGGGCTGTTGGGCCCTTGGACCCAGCAGACATTCGAACTGCGGCTTTCAGATGTGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CCA 72 bp CACAGCCAGAGAGCAGCAAAGCTGAGGTTGTGGGGTTaGACCCCAGCAGGCCCGATCCCAAAGCCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: HSQRAAKLRLWG*TPAGPIPKPEL
Trigger: AAGCTCAGGCTTTGGGATCGGGCCTGCTGGGGTCCAACCCCACAACCTCAGCTTTGCTGCTCTCTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CAA 72 bp ACAGGCTCAGAAGGGGGTGAGGGCTTGCTGCTGCTCTaGACAGTGGTGCTGAGGACCCGGAAGATGTGCTGG +
Preference number: 6 (lower is better)
Translates to: TGSEGGEGLLLL*TVVLRTRKMCW
Trigger: CCAGCACATCTTCCGGGTCCTCAGCACCACTGTCAAGAGCAGCAGCAAGCCCTCACCCCCTTCTGAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312358.12
ENST00000485069.1
ENST00000485813.5
CDS TCA 72 bp CAGGTGGGTCACGTTGTAGTAACAGTCGGGGATGCCTaGGCTCACAGGGTGCCACACAGACTCCCCATCCAC +
Preference number: 6 (lower is better)
Translates to: QVGHVVVTVGDA*AHRVPHRLPIH
Trigger: GTGGATGGGGAGTCTGTGTGGCACCCTGTGAGCTCAGGCATCCCCGACTGTTACTACAACGTGACCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CCCGAAGCTCCAGGCGCTGGGTTCCCTGCACATCGCTaGTGTCATCCTCAGCCGTCTCTGAGTCCCTTATCT +
Preference number: 6 (lower is better)
Translates to: PEAPGAGFPAHR*CHPQPSLSPLS
Trigger: AGATAAGGGACTCAGAGACGGCTGAGGATGACATCAGCGATGTGCAGGGAACCCAGCGCCTGGAGCTTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498378.5
CDS GCA 72 bp CCATCGAAATGCATCTTGCATTTGAGCAGTGCAGGCTaGAGCAGGCGGCCACGGCACAGCCAATCCACCTCC +
Preference number: 6 (lower is better)
Translates to: PSKCILHLSSAG*SRRPRHSQSTS
Trigger: GGAGGTGGATTGGCTGTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CTGGCAGGTGGGTCACGTTGTAGTAACAGTCGGGGATaGCTGAGCTCACAGGGTGCCACACAGACTCCCCAT +
Preference number: 6 (lower is better)
Translates to: LAGGSRCSNSRG*LSSQGATQTPH
Trigger: ATGGGGAGTCTGTGTGGCACCCTGTGAGCTCAGGCATCCCCGACTGTTACTACAACGTGACCCACCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp ACAAAGACCTTCTCAGAAGAGTTGCTGAAGGGCCCCTaGCCAGCACGGTTGGCACAGGCCACACGGAACCTC +
Preference number: 6 (lower is better)
Translates to: TKTFSEELLKGP*PARLAQATRNL
Trigger: GAGGTTCCGTGTGGCCTGTGCCAACCGTGCTGGGCAGGGGCCCTTCAGCAACTCTTCTGAGAAGGTCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp AGGTACTCACCTCGGACCTCCAAGCGGGCCTCGCACTaGCGAGCACCATACTCATTGACCGCTTTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: RYSPRTSKRASH*RAPYSLTALQV
Trigger: CACTTGCAAAGCGGTCAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTTGGAGGTCCGAGGTGAGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000496786.5
CDS GCA 72 bp GCTAGGACGCCCATTTCTTGGGTGAGCTGGGCCTGGTaGAGAGGAACACACACCGCAGACAAGTCACATCCC +
Preference number: 6 (lower is better)
Translates to: ARTPISWVSWAW*RGTHTADKSHP
Trigger: GGGATGTGACTTGTCTGCGGTGTGTGTTCCTCTGCACCAGGCCCAGCTCACCCAAGAAATGGGCGTCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS GCA 72 bp CCTGGGACCACATCTGAAAGCCGCAGTTCGAATGTCTaGTGGGTCCAAGGGCCCAACAGCCCCACAGGATCA +
Preference number: 6 (lower is better)
Translates to: PGTTSESRSSNV*WVQGPNSPTGS
Trigger: TGATCCTGTGGGGCTGTTGGGCCCTTGGACCCAGCAGACATTCGAACTGCGGCTTTCAGATGTGGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS CCA 72 bp TGCGCACGTACTGGTGACCCAACTCCTCCTGGACGCTaGCAGAGAGGTTTGGTGGCGATAACCCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: CARTGDPTPPGR*QRGLVAITPCP
Trigger: AGGACAAGGGGTTATCGCCACCAAACCTCTCTGCCAGCGTCCAGGAGGAGTTGGGTCACCAGTACGTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GGCACAGGCCACACGGAACCTCACAGTCACGCCAACTaGCAGGTGGGTCACGTTGTAGTAACAGTCGGGGAT +
Preference number: 6 (lower is better)
Translates to: GTGHTEPHSHAN*QVGHVVVTVGD
Trigger: ATCCCCGACTGTTACTACAACGTGACCCACCTGCCAGTTGGCGTGACTGTGAGGTTCCGTGTGGCCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GGTGAGGTGGAAGGCAAGATAAACGGTTGTGGCCTTTaGGGAGGAAAACCCATGGCCCTCGAGGGCCCCCTA +
Preference number: 6 (lower is better)
Translates to: GEVEGKINGCGL*GGKPMALEGPL
Trigger: TAGGGGGCCCTCGAGGGCCATGGGTTTTCCTCCCCAAAGGCCACAACCGTTTATCTTGCCTTCCACCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CAA 72 bp CGGAACCTGTCACTGAGCCCACAGAGGAGTTCCCGGTaGCCACAGCTCTCAGCAATGAGCACGAGGTACCGA +
Preference number: 6 (lower is better)
Translates to: RNLSLSPQRSSR*PQLSAMSTRYR
Trigger: TCGGTACCTCGTGCTCATTGCTGAGAGCTGTGGCAACCGGGAACTCCTCTGTGGGCTCAGTGACAGGTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 90 bp TCAGAATACCGGAACCTGTCACTGAGCCCACAGAGGAGTTCCCGGTaGCCACAGCTCTCAGCAATGAGCACGAGGTACCGAGGGGTGATG +
Preference number: 6 (lower is better)
Translates to: SEYRNLSLSPQRSSR*PQLSAMSTRYRGVM
Trigger: CATCACCCCTCGGTACCTCGTGCTCATTGCTGAGAGCTGTGGCAACCGGGAACTCCTCTGTGGGCTCAGTGACAGGTTCCGGTATTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CCAAGCGGGCCTCGCACTGCCGAGCACCATACTCATTaGCCGCTTTGCAAGTGTAGAAACCAGCATCGCCAC +
Preference number: 6 (lower is better)
Translates to: PSGPRTAEHHTH*PLCKCRNQHRH
Trigger: GTGGCGATGCTGGTTTCTACACTTGCAAAGCGGTCAATGAGTATGGTGCTCGGCAGTGCGAGGCCCGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000312358.12
ENST00000396686.5
ENST00000396688.5
ENST00000396689.2
ENST00000396698.5
ENST00000462545.5
ENST00000463218.5
ENST00000464989.5
ENST00000475921.1
ENST00000485813.5
ENST00000496786.5
ENST00000498378.5
CDS TCA 72 bp GCTTGCATTTGCGGCCATCGAAATGCATCTTGCATTTaGGCAGTGCAGGCTGCAGCAGGCGGCCACGGCACA +
Preference number: 6 (lower is better)
Translates to: ACICGHRNASCI*AVQAAAGGHGT
Trigger: TGTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp TTTGCGGCCATCGAAATGCATCTTGCATTTGAGCAGTaGAGGCTGCAGCAGGCGGCCACGGCACAGCCAATC +
Preference number: 6 (lower is better)
Translates to: FAAIEMHLAFEQ*RLQQAATAQPI
Trigger: GATTGGCTGTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp ATGGACAGGCCTGACCAGAGGACATGGGTTTGGATCTaGAGCAGTGTCAGGCAGGTTGTGTACCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: MDRPDQRTWVWI*SSVRQVVYLGV
Trigger: CACCCCCAGGTACACAACCTGCCTGACACTGCTGCAGATCCAAACCCATGTCCTCTGGTCAGGCCTGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 72 bp GATGTAGACCCACCTGTTGGCCACAGCCCTACAGCTTaGACCCCCAAACGCTCGAGGGATAGGAAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: DVDPPVGHSPTA*TPKRSRDRKAE
Trigger: CTCTGCTTTCCTATCCCTCGAGCGTTTGGGGGTGCAAGCTGTAGGGCTGTGGCCAACAGGTGGGTCTACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496786.5
CDS CCA 72 bp CAGCACCTCGTCCTTGTACCACATGATGTCCGGCAGTaGTTTTCCCTCGACCACCACCGCAAAGCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: QHLVLVPHDVRQ*FSLDHHRKASS
Trigger: ACTGCTCGCTTTGCGGTGGTGGTCGAGGGAAAACCACTGCCGGACATCATGTGGTACAAGGACGAGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp AGCTTGCATTTGCGGCCATCGAAATGCATCTTGCATTaGAGCAGTGCAGGCTGCAGCAGGCGGCCACGGCAC +
Preference number: 6 (lower is better)
Translates to: SLHLRPSKCILH*SSAGCSRRPRH
Trigger: GTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp GGCTGGGCACTGCCAAAGTCCACAATCTTGAGGGCATaGTCAGGGGCCAGCAGCAGGTTGTCTGGCTTGATG +
Preference number: 6 (lower is better)
Translates to: GWALPKSTILRA*SGASSRLSGLM
Trigger: CATCAAGCCAGACAACCTGCTGCTGGCCCCTGACAATGCCCTCAAGATTGTGGACTTTGGCAGTGCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp CGCGGGGCCTCTCTGGAAGGTCAGCAGCATCTCGACTaGCTCATTCCACAAACATGCGCGCACACACACTGT +
Preference number: 6 (lower is better)
Translates to: RGASLEGQQHLD*LIPQTCAHTHC
Trigger: ACAGTGTGTGTGCGCGCATGTTTGTGGAATGAGCAAGTCGAGATGCTGCTGACCTTCCAGAGAGGCCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435853.5
CDS CAA 72 bp ACACACACACATGCACACACACACACACACACCTGCTaGTGTCCAGTCCAGCCGCAGACCTGGGCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: THTHAHTHTHTC*CPVQPQTWASH
Trigger: ATGGGAGGCCCAGGTCTGCGGCTGGACTGGACACAAGCAGGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CAA 90 bp GTAAGTAGCAGCTTGCATTTGCGGCCATCGAAATGCATCTTGCATTaGAGCAGTGCAGGCTGCAGCAGGCGGCCACGGCACAGCCAATCC +
Preference number: 6 (lower is better)
Translates to: VSSSLHLRPSKCILH*SSAGCSRRPRHSQS
Trigger: GGATTGGCTGTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp CCCTGCCGATCTCCTGGTGGATGTCATAAAAGTCGCTaGGTCTCCTTCCTCGATGGTCCTCATCCTCCCCGA +
Preference number: 6 (lower is better)
Translates to: PCRSPGGCHKSR*VSFLDGPHPPR
Trigger: TCGGGGAGGATGAGGACCATCGAGGAAGGAGACTCAGCGACTTTTATGACATCCACCAGGAGATCGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp ACACGTCAGCCATCATGTATGGCGTACCAGGCCCCATaGAAGGCACCTGGAGGGGCACAAGCTTTCAAACAG +
Preference number: 6 (lower is better)
Translates to: TRQPSCMAYQAP*KAPGGAQAFKQ
Trigger: CTGTTTGAAAGCTTGTGCCCCTCCAGGTGCCTTGCATGGGGCCTGGTACGCCATACATGATGGCTGACGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS CCA 72 bp ACAATCTCGGGTGCTACAAACTCAGGTGTGCCATACTaGCAGTACTGGGGCTCTCCTGGAGTCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TISGATNSGVPY*QYWGSPGVSSW
Trigger: CCAGGAGCTGACTCCAGGAGAGCCCCAGTACTGCCAGTATGGCACACCTGAGTTTGTAGCACCCGAGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GGAAGACACTGGTTTAACCCCTTGAGGAGTGGAGGCTaGGATCGGGGTCCCAGTGTCAAGGACGAAAGGCTT +
Preference number: 6 (lower is better)
Translates to: GRHWFNPLRSGG*DRGPSVKDERL
Trigger: AAGCCTTTCGTCCTTGACACTGGGACCCCGATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGTGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GAGAGAGACAGGGACAGACTGTTATCAGAGCGTTTGTaGGGCAGGGCATGGAGGGCAGTCAAGACAGAAGGG +
Preference number: 6 (lower is better)
Translates to: ERDRDRLLSERL*GRAWRAVKTEG
Trigger: CCCTTCTGTCTTGACTGCCCTCCATGCCCTGCCCCACAAACGCTCTGATAACAGTCTGTCCCTGTCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 72 bp CAACTGCAGGCTCCAAAAGCAGGGGAAGCAGGTCTATaGAACCCTGGAGCAGCATGGCTAGGACGCCCATTT +
Preference number: 6 (lower is better)
Translates to: QLQAPKAGEAGL*NPGAAWLGRPF
Trigger: AAATGGGCGTCCTAGCCATGCTGCTCCAGGGTTCCATAGACCTGCTTCCCCTGCTTTTGGAGCCTGCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475921.1
CDS CAA 90 bp ACAGATGTAAGTAGCAGCTTGCATTTGCGGCCATCGAAATGCATCTaGCATTTGAGCAGTGCAGGCTGCAGCAGGCGGCCACGGCACAGC +
Preference number: 6 (lower is better)
Translates to: TDVSSSLHLRPSKCI*HLSSAGCSRRPRHS
Trigger: GCTGTGCCGTGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACTTACATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp CATCCTCAGCCGTCTCTGAGTCGTAACTTTGCTTTCTaGAGGAGCGGAAAACTTCGCATGGGTGAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: HPQPSLSRNFAF*RSGKLRMGESA
Trigger: GGCCGACTCACCCATGCGAAGTTTTCCGCTCCTGCAGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435853.5
ENST00000452101.1
CDS GCA 72 bp GCACTTACTGGTGCTGCCACTGGCCACACACACACATaGACACACACACACACACACCTGCTTGTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: ALTGAATGHTHT*THTHTHLLVSS
Trigger: ACTGGACACAAGCAGGTGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 72 bp GGTAGTCCAGGCCTTGTAGCAGCTGCACCATGTAAGTaGCCACGTCATCCTCAGAATACCGGAACCTGTCAC +
Preference number: 6 (lower is better)
Translates to: GSPGLVAAAPCK*PRHPQNTGTCH
Trigger: GTGACAGGTTCCGGTATTCTGAGGATGACGTGGCCACTTACATGGTGCAGCTGCTACAAGGCCTGGACTACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp TACTTGGGCTTGTTATTCCAGCTGCCCCAGTGGTTCTaGTATCCTTGGCACTTACTGGTGCTGCCACTGGCC +
Preference number: 6 (lower is better)
Translates to: YLGLLFQLPQWF*YPWHLLVLPLA
Trigger: GGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACAAGCCCAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CAA 72 bp AGTAGCAGCTTGCATTTGCGGCCATCGAAATGCATCTaGCATTTGAGCAGTGCAGGCTGCAGCAGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: SSSLHLRPSKCI*HLSSAGCSRRP
Trigger: TGGCCGCCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp ATACACAGGAGTAGAGGAAGACACTGGTTTAACCCCTaGAGGAGTGGAGGCTGGGATCGGGGTCCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: IHRSRGRHWFNP*RSGGWDRGPSV
Trigger: GACACTGGGACCCCGATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGTGTCTTCCTCTACTCCTGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp CCAGGGCTCCGTGATGGAGCAACAGGGAAGGTGGTGTaGTGTAGTAAGCTGAGCACGGAACAATGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PGLRDGATGKVV*CSKLSTEQCAV
Trigger: CACAGCACATTGTTCCGTGCTCAGCTTACTACACAACACCACCTTCCCTGTTGCTCCATCACGGAGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462545.5
ENST00000464989.5
CDS CAA 72 bp CTTGTTATTCCAGCTGCCCCAGTGGTTCTGGTATCCTaGGCACTTACTGGTGCTGCCACTGGCCACACACAC +
Preference number: 6 (lower is better)
Translates to: LVIPAAPVVLVS*ALTGAATGHTH
Trigger: GTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CAA 90 bp AGTCACCACATACACAGGAGTAGAGGAAGACACTGGTTTAACCCCTaGAGGAGTGGAGGCTGGGATCGGGGTCCCAGTGTCAAGGACGAA +
Preference number: 6 (lower is better)
Translates to: SHHIHRSRGRHWFNP*RSGGWDRGPSVKDE
Trigger: TTCGTCCTTGACACTGGGACCCCGATCCCAGCCTCCACTCCTCAAGGGGTTAAACCAGTGTCTTCCTCTACTCCTGTGTATGTGGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS TCA 72 bp ACAGGCCAGATGTCAGTGACTCCAGACACGGGGCTCTaGTTGACAATCTCGGGTGCTACAAACTCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: TGQMSVTPDTGL*LTISGATNSGV
Trigger: CACACCTGAGTTTGTAGCACCCGAGATTGTCAATCAGAGCCCCGTGTCTGGAGTCACTGACATCTGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GACTCCAGACACGGGGCTCTGATTGACAATCTCGGGTaGTACAAACTCAGGTGTGCCATACTGGCAGTACTG +
Preference number: 6 (lower is better)
Translates to: DSRHGALIDNLG*YKLRCAILAVL
Trigger: CAGTACTGCCAGTATGGCACACCTGAGTTTGTAGCACCCGAGATTGTCAATCAGAGCCCCGTGTCTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp TCTGGCTGCCATGACAAGCAGGAGCCACGTACTGGTTaGCAAAGCATGGCAATGAACTCCTTCCCATTAGGC +
Preference number: 6 (lower is better)
Translates to: SGCHDKQEPRTG*QSMAMNSFPLG
Trigger: GCCTAATGGGAAGGAGTTCATTGCCATGCTTTGGCAACCAGTACGTGGCTCCTGCTTGTCATGGCAGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498378.5
CDS CCA 72 bp AGGGATGTACAGAGAGAACCTTTCGCAAGAAGAGGGTaGCGCTCTGGGATGTATTGGGGTACAGCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: RDVQREPFARRG*RSGMYWGTAGR
Trigger: CCTTCCAGCTGTACCCCAATACATCCCAGAGCGCCACCCTCTTCTTGCGAAAGGTTCTCTCTGTACATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp GGTTCTGGTATCCTTGGCACTTACTGGTGCTGCCACTaGCCACACACACACATGCACACACACACACACACA +
Preference number: 6 (lower is better)
Translates to: GSGILGTYWCCH*PHTHMHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CCA 72 bp TTGTTATTCCAGCTGCCCCAGTGGTTCTGGTATCCTTaGCACTTACTGGTGCTGCCACTGGCCACACACACA +
Preference number: 6 (lower is better)
Translates to: LLFQLPQWFWYP*HLLVLPLATHT
Trigger: TGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CAA 90 bp ATACTTGGGCTTGTTATTCCAGCTGCCCCAGTGGTTCTGGTATCCTaGGCACTTACTGGTGCTGCCACTGGCCACACACACACATGCACA +
Preference number: 6 (lower is better)
Translates to: ILGLVIPAAPVVLVS*ALTGAATGHTHTCT
Trigger: TGTGCATGTGTGTGTGTGGCCAGTGGCAGCACCAGTAAGTGCCAAGGATACCAGAACCACTGGGGCAGCTGGAATAACAAGCCCAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS GCA 72 bp CATCCTCAGCCGTCTCTGAGTCGTAACTTTGCTTTCTaGAGGAGCGGAAAACTTCGCTTCCATAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: HPQPSLSRNFAF*RSGKLRFHRSS
Trigger: GCTGCTCCTATGGAAGCGAAGTTTTCCGCTCCTGCAGAAAGCAAAGTTACGACTCAGAGACGGCTGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464989.5
CDS CAA 90 bp ACGCCACTGTCGTCCTCATGTACAGATGTAAGTAGCAGCTTGCATTaGCGGCCATCGAAATGCATCTTGCATTTGAGCAGTGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: TPLSSSCTDVSSSLH*RPSKCILHLSSAGC
Trigger: GCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACTTACATCTGTACATGAGGACGACAGTGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS GCA 72 bp GATGTAAGTAGCAGCTTGCATTTGCGGCCATCGAAATaGATCTTGCATTTGAGCAGTGCAGGCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: DVSSSLHLRPSK*ILHLSSAGCSR
Trigger: CCTGCTGCAGCCTGCACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CCA 72 bp ATCATGTATGGCGTACCAGGCCCCATGCAAGGCACCTaGAGGGGCACAAGCTTTCAAACAGACAAAGAACAA +
Preference number: 6 (lower is better)
Translates to: IMYGVPGPMQGT*RGTSFQTDKEQ
Trigger: TTGTTCTTTGTCTGTTTGAAAGCTTGTGCCCCTCCAGGTGCCTTGCATGGGGCCTGGTACGCCATACATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS TCA 72 bp GCACCCACCACTCCTCTAACACCCCTCATCAACACTTaGGTTCCGTTTTTACAGATGGGAAAGCTGAAGCTC +
Preference number: 6 (lower is better)
Translates to: APTTPLTPLINT*VPFLQMGKLKL
Trigger: GAGCTTCAGCTTTCCCATCTGTAAAAACGGAACTCAAGTGTTGATGAGGGGTGTTAGAGGAGTGGTGGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485069.1
CDS GCA 72 bp GGTCCCTCCCTTCTACTGTTGAATCGTCCTCAAAAATaGCCAGTGGTTAGGTTAGGAGAAAAGGTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: GPSLLLLNRPQK*PVVRLGEKVPG
Trigger: CCCAGGAACCTTTTCTCCTAACCTAACCACTGGGCATTTTTGAGGACGATTCAACAGTAGAAGGGAGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498378.5
CDS CCA 72 bp GTGGCCGTTCCTCAACTTCATCCACAATTAGAGCGTTaGCTTCTGGAGAAAGACAGGACTGCACTGTGTATG +
Preference number: 6 (lower is better)
Translates to: VAVPQLHPQLER*LLEKDRTALCM
Trigger: CATACACAGTGCAGTCCTGTCTTTCTCCAGAAGCCAACGCTCTAATTGTGGATGAAGTTGAGGAACGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS CAA 72 bp TGTGGCCGTTCCTCAACTTCATCCACAATTAGAGCGTaGGCTTCTGGAGAAAGACAGGACTGCACTGTGTAT +
Preference number: 6 (lower is better)
Translates to: CGRSSTSSTIRA*ASGERQDCTVY
Trigger: ATACACAGTGCAGTCCTGTCTTTCTCCAGAAGCCAACGCTCTAATTGTGGATGAAGTTGAGGAACGGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462545.5
CDS CAA 72 bp CCACTGTCGTCCTCATGTACAGATGTAAGTAGCAGCTaGCATTTGCGGCCATCGAAATGCATCTTGCATTTG +
Preference number: 6 (lower is better)
Translates to: PLSSSCTDVSSS*HLRPSKCILHL
Trigger: CAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACTTACATCTGTACATGAGGACGACAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5
CDS CAA 72 bp TCGTCCTCATGTACAGATGTAAGTAGCAGCTTGCATTaGCGGCCATCGAAATGCATCTTGCATTTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SSSCTDVSSSLH*RPSKCILHLSS
Trigger: ACTGCTCAAATGCAAGATGCATTTCGATGGCCGCAAATGCAAGCTGCTACTTACATCTGTACATGAGGACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312358.12
ENST00000485813.5