RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPEF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000152582

Ensembl transcript IDs: ENST00000282469.10, ENST00000356031.8, ENST00000440995.6, ENST00000502454.1, ENST00000503074.1, ENST00000504054.1, ENST00000505088.1, ENST00000505847.5, ENST00000506526.5, ENST00000508817.1, ENST00000509059.5, ENST00000510777.5, ENST00000513078.1, ENST00000635995.1, ENST00000637061.1, ENST00000637569.1

Found 999 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAACAGCCACACTGAGGGCCCTGTAGACTCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTG +
Preference number: 1 (lower is better)
Translates to: SNSHTEGPVDSFHGV*VASKVKQHLCVVKL
Trigger: CAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACAGGGCCCTCAGTGTGGCTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR TCA 90 bp CTCTGCCTGCTGAGTGCAGTTGCCGAACAATTGCAGGATATCCCTTaGGAAAGTTCTGGAGGGCTGCCTGTAATCCATGAAGCCACTTCC +
Preference number: 1 (lower is better)
Translates to: LCLLSAVAEQLQDIP*ESSGGLPVIHEATS
Trigger: GGAAGTGGCTTCATGGATTACAGGCAGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTGCACTCAGCAGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR TCA 90 bp ATGTCAGCTTGGAGAAGGGACTCCAGAAGTTCTTTGGGTTTCTTTTaGCTGGTGTCACTTTTGCCTCTGCCTGCTGAGTGCAGTTGCCGA +
Preference number: 1 (lower is better)
Translates to: MSAWRRDSRSSLGFF*LVSLLPLPAECSCR
Trigger: TCGGCAACTGCACTCAGCAGGCAGAGGCAAAAGTGACACCAGTCAAAAGAAACCCAAAGAACTTCTGGAGTCCCTTCTCCAAGCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 90 bp CAGCTTGGAGAAGGGACTCCAGAAGTTCTTTGGGTTTCTTTTGACTaGTGTCACTTTTGCCTCTGCCTGCTGAGTGCAGTTGCCGAACAA +
Preference number: 1 (lower is better)
Translates to: QLGEGTPEVLWVSFD*CHFCLCLLSAVAEQ
Trigger: TTGTTCGGCAACTGCACTCAGCAGGCAGAGGCAAAAGTGACACCAGTCAAAAGAAACCCAAAGAACTTCTGGAGTCCCTTCTCCAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 90 bp TCTCTTAATAGTAGGGCCACCTCGTTGTTCTCTCCCTCTATGCTATaGGTACCATCACTTCCAAAACCAACCAGCTTCTTTGCCCAGTCT +
Preference number: 1 (lower is better)
Translates to: SLNSRATSLFSPSML*VPSLPKPTSFFAQS
Trigger: AGACTGGGCAAAGAAGCTGGTTGGTTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACTATTAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR TCA 90 bp GATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTaGTTTCTGAGTTGCAGTTCTTCCTTTCTTCTGCTGGGTTTGTCC +
Preference number: 1 (lower is better)
Translates to: DAHLACVVQTCLVVM*FLSCSSSFLLLGLS
Trigger: GGACAAACCCAGCAGAAGAAAGGAAGAACTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
3UTR GCA 90 bp GTATTTCTCTTAATAGTAGGGCCACCTCGTTGTTCTCTCCCTCTATaGTATGGGTACCATCACTTCCAAAACCAACCAGCTTCTTTGCCC +
Preference number: 1 (lower is better)
Translates to: VFLLIVGPPRCSLPL*YGYHHFQNQPASLP
Trigger: GGGCAAAGAAGCTGGTTGGTTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACTATTAAGAGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR TCA 90 bp TTTCTCACAGCAGAAATGTTTTCTTTCCCTCTGAGGCAGTTACCATaGAAGTGTGTGGCTGAATCCACCATGCGTTCTTTTGGCCCTAGT +
Preference number: 1 (lower is better)
Translates to: FLTAEMFSFPLRQLP*KCVAESTMRSFGPS
Trigger: ACTAGGGCCAAAAGAACGCATGGTGGATTCAGCCACACACTTTCATGGTAACTGCCTCAGAGGGAAAGAAAACATTTCTGCTGTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR CCA 90 bp ATCCAAATAAAATCTTTGAGGGGACGTCCGGTCTTGGCAATAGCATaGCATGATCTGAATAAGTTCTCTACTCTCCCGAGGGTTACTTTG +
Preference number: 1 (lower is better)
Translates to: IQIKSLRGRPVLAIA*HDLNKFSTLPRVTL
Trigger: CAAAGTAACCCTCGGGAGAGTAGAGAACTTATTCAGATCATGCCATGCTATTGCCAAGACCGGACGTCCCCTCAAAGATTTTATTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTaGGATGGGGAGAGTAGGATGGTGAGGAAAGAAATGGATATGTAT +
Preference number: 1 (lower is better)
Translates to: KSYDCYTFTSKGEME*DGESRMVRKEMDMY
Trigger: ATACATATCCATTTCTTTCCTCACCATCCTACTCTCCCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
3UTR-3UTR GCA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGTGGCTGAATCCACCATaGGTTCTTTTGGCCCTAGTC +
Preference number: 2 (lower is better)
Translates to: LELLKGLKELLLQGNGPRWLNPP*VLLALV
Trigger: GACTAGGGCCAAAAGAACGCATGGTGGATTCAGCCA...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp GGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTCCTCCTCCAAGGGAATaGGCCAAGGCATTGAGGTTA +
Preference number: 2 (lower is better)
Translates to: GGKQSKAASVCSQAGVDPPPPRE*AKALRL
Trigger: TAACCTCAATGCCTTGGCCCATTCCCTTGGAGGAGG...AGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp CAGTTGCCGAACAATTGCAGGATATCCCTTGAGAAAGTTCTGGAGGGCTGCCTGGGTGGCTCTGTTCACTaGAGAGCTACTTGTTGCTTC +
Preference number: 2 (lower is better)
Translates to: QLPNNCRISLEKVLEGCLGGSVH*RATCCF
Trigger: GAAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACC...CAGGCAGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR TCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTGGCCCTAGTCTTGTTTaGTACATTTGGAGCATTTCC +
Preference number: 2 (lower is better)
Translates to: PPREWAKALRLLTGTSASGPSLV*YIWSIS
Trigger: GGAAATGCTCCAAATGTATCAAACAAGACTAGGGCC...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp TACCATCACTTCCAAAACCAACCAGCTTCTTTGCCCAGTCTTGGCTCGACAGTCCTGAGGCAGTTACCATaGAAGTGTGTGGCTGAATCC +
Preference number: 2 (lower is better)
Translates to: YHHFQNQPASLPSLGSTVLRQLP*KCVAES
Trigger: GGATTCAGCCACACACTTTCATGGTAACTGCCTCAG...GACTGTCGAGCCAAGACTGGGCAAAGAAGCTGGTTGGTTTTGGAAGTGATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CCA 90 bp AGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACAGCGCCCTCACCACATTTTaGCTGGCATCTCTGAAACAG +
Preference number: 2 (lower is better)
Translates to: SLHILLKSDGAQLLLIHSALTTF*LASLKQ
Trigger: CTGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGC...GCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp GGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTATGAAAGTGTGTGGCTaGATCCACCATGCGTTCTTT +
Preference number: 2 (lower is better)
Translates to: GGKQSKAASVCSQAGVDPMKVCG*IHHAFF
Trigger: AAAGAACGCATGGTGGATTCAGCCACACACTTTCAT...AGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGTCTCTGAAACAGCCTTaGAGTCTCTTGATAAGATGT +
Preference number: 2 (lower is better)
Translates to: LELLKGLKELLLQGNGPRSLKQP*SLLIRC
Trigger: ACATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGA...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp GCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTTAACAATGTCAGCTTaGAGAAGGGACTCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: AKALRLLTGTSASPRTRSLTMSA*RRDSRS
Trigger: ACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAA...ACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp AAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAGCCCTCACCACATTTTaGCTGGCATCTCTGAAACAG +
Preference number: 2 (lower is better)
Translates to: KDASREQRLQLAPGSWHLALTTF*LASLKQ
Trigger: CTGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGC...TAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAG +
Preference number: 2 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFESFHGV*VASKVK
Trigger: CTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGA...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR CAA 90 bp AGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTaGCAGTTCTTCCTTTCTTCTGCTGGGTTTGTCCAGTTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: SMCGPDLLGGYVISE*QFFLSSAGFVQFLW
Trigger: CCAGAGAAACTGGACAAACCCAGCAGAAGAAAGGAAGAACTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
3UTR-3UTR TCA 90 bp TCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCTTTGGCTGGCATCTCTaGAACAGCCTTGAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: SLSLGGWQIYWSPVLHFPFGWHL*NSLEVS
Trigger: AGAGACTTCAAGGCTGTTTCAGAGATGCCAGCCAAA...GGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp TCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCTTCCTGTCTCCTATTTaGGAAGGCATCACAGGTCGA +
Preference number: 2 (lower is better)
Translates to: SLSLGGWQIYWSPVLHFPFLSPI*EGITGR
Trigger: TCGACCTGTGATGCCTTCTCAAATAGGAGACAGGAA...GGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR GCA 90 bp CCAGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACATCCCGAGGGTTACTTTaGTCATGGTCCTCATCATTA +
Preference number: 2 (lower is better)
Translates to: PACIYCSKVMVPNCSLSTSRGLL*SWSSSL
Trigger: TAATGATGAGGACCATGAGCAAAGTAACCCTCGGGA...TGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CCA 90 bp TCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCGTAGTCAAGCTGGGGTaGATCCTTCTCATAGTCAGC +
Preference number: 2 (lower is better)
Translates to: SCASLPPLNTLSSVSMDIVVKLG*ILLIVS
Trigger: GCTGACTATGAGAAGGATCCACCCCAGCTTGACTAC...GATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp ATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGTCTTGGCAATAGCATaGCATGATCTGAATAAGTTC +
Preference number: 2 (lower is better)
Translates to: MGQGIEVTNRNFRQSTNSVLAIA*HDLNKF
Trigger: GAACTTATTCAGATCATGCCATGCTATTGCCAAGAC...CGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CAA 90 bp GCATGGCATGATCTGAATAAGTTCTCTACTCTCCCGAGGGTTACTTaGCTCATGGTCCTCATCATTAGTTTGGTGGTGGCTCTGTTCACT +
Preference number: 2 (lower is better)
Translates to: AWHDLNKFSTLPRVT*LMVLIISLVVALFT
Trigger: AGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGAGAGTAGAGAACTTATTCAGATCATGCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR TCA 90 bp ATAAAAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACTGAGGCAGTTACCATaGAAGTGTGTGGCTGAATCC +
Preference number: 2 (lower is better)
Translates to: IKGCFKRTATSIGSRFLALRQLP*KCVAES
Trigger: GGATTCAGCCACACACTTTCATGGTAACTGCCTCAG...TGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp CCTCAGGTTCAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTTTGGAATGGAAGCTTTaGCTTGTTGGAAGACATGAG +
Preference number: 2 (lower is better)
Translates to: PQVQEIPQLDLHQLRRSFLEWKL*LVGRHE
Trigger: CTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAA...AAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTGAACCTGAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR TCA 90 bp TCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCATCACAGGTCGAAGGTaGAGGCCTTTGAAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: SCASLPPLNTLSSVSMDIITGRR*RPLKAV
Trigger: AACTGCTTTCAAAGGCCTTCACCTTCGACCTGTGAT...GATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR GCA 90 bp TGTAGACTCCTTCCACGGTGTCTGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTCTATAAGATGCTCCTaGCTATTAAATGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: CRLLPRCLGGKQSKAASVSIRCS*LLNGRG
Trigger: ACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA...CACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR GCA 90 bp GCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATAGTCAGCAAATACACCTTTCCTGCATGTaGAAACTGCACATAGACAAG +
Preference number: 2 (lower is better)
Translates to: AASVCSQAGVDPSHSQQIHLSCM*KLHIDK
Trigger: CTTGTCTATGTGCAGTTTGCACATGCAGGAAAGGTG...TATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CAA 90 bp GGGCCACAATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTaGGCTGGCATCTCTGAAACAGCCTTGAAGTCTCTTGATAAGATG +
Preference number: 2 (lower is better)
Translates to: GPQFKTSNHGSPHHI*AGISETALKSLDKM
Trigger: CATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATTGTGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp TCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCATGAAAGTGTGTGGCTaGATCCACCATGCGTTCTTT +
Preference number: 2 (lower is better)
Translates to: SCASLPPLNTLSSVSMDIMKVCG*IHHAFF
Trigger: AAAGAACGCATGGTGGATTCAGCCACACACTTTCAT...GATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAATTTGGCTGGCATCTCTaGAACAGCCTTGAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKFGWHL*NSLEVS
Trigger: AGAGACTTCAAGGCTGTTTCAGAGATGCCAGCCAAA...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp CCAGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACACCACGAACTCGGAGTTaGCTGTTAATAAAGATGTTA +
Preference number: 2 (lower is better)
Translates to: PACIYCSKVMVPNCSLSTPRTRS*LLIKML
Trigger: TAACATCTTTATTAACAGTCAACTCCGAGTTCGTGG...TGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR TCA 90 bp ATAAAAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTTATCCACAGCCTTaGACTTCTGAAGGGTCTCAA +
Preference number: 2 (lower is better)
Translates to: IKGCFKRTATSIGSRFLAPYPQP*TSEGSQ
Trigger: TTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGG...TGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR TCA 90 bp GCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTTATACTGCTCAAAAGTaGTGGTGCCCAACTGCTCCT +
Preference number: 2 (lower is better)
Translates to: ANLLESCASLPPLNTLSSYTAQK*WCPTAP
Trigger: AGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATA...ACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCCACCAAAAGAGTGTaGAAGAACACAGGAATACAT +
Preference number: 2 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISTKRV*KNTGIH
Trigger: ATGTATTCCTGTGTTCTTTCACACTCTTTTGGTGGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR-3UTR GCA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTACTGGTTCATAATGTaGAGTCAGGATGGATACCTC +
Preference number: 2 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFEYWFIM*SQDGYL
Trigger: GAGGTATCCATCCTGACTGCACATTATGAACCAGTA...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR GCA 90 bp TTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGTGTTCTCTCCCTCTATaGTATGGGTACCATCACTTC +
Preference number: 2 (lower is better)
Translates to: LESCASLPPLNTLSSVSMCSLPL*YGYHHF
Trigger: GAAGTGATGGTACCCATAGCATAGAGGGAGAGAACA...CATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CCA 90 bp GCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTACATCCAACAAGAAGTaGGCAAATTTAACAATGTCA +
Preference number: 2 (lower is better)
Translates to: AKALRLLTGTSASPRTRSTSNKK*ANLTMS
Trigger: TGACATTGTTAAATTTGCCCACTTCTTGTTGGATGT...ACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTACATCCAACAAGAAGTaGGCAAATTTAACAATGTCA +
Preference number: 2 (lower is better)
Translates to: PPREWAKALRLLTGTSASTSNKK*ANLTMS
Trigger: TGACATTGTTAAATTTGCCCACTTCTTGTTGGATGT...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp CCTCAGGTTCAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTTCCTGTAATTCAGGTTaGGTAAGGTGCATCCAATTA +
Preference number: 2 (lower is better)
Translates to: PQVQEIPQLDLHQLRRSFSCNSG*VRCIQL
Trigger: TAATTGGATGCACCTTACCCAACCTGAATTACAGGA...AAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTGAACCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAG +
Preference number: 2 (lower is better)
Translates to: LKVISLHHFLVHVHSFGESFHGV*VASKVK
Trigger: CTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp AACCAGCTTCTTTGCCCAGTCTTGGCTCGACAGTCTAAGTTGAAGATTTATCTCTCATTAGTTTGGTGGTaGCTCTGTTCACTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: NQLLCPVLARQSKLKIYLSLVWW*LCSLES
Trigger: GCTCTCCAGTGAACAGAGCCACCACCAAACTAATGA...GAGATAAATCTTCAACTTAGACTGTCGAGCCAAGACTGGGCAAAGAAGCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR TCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGTGCTTGGTGGTTATGTaGTTTCTGAGTTGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVCLVVM*FLSCSS
Trigger: AGAACTGCAACTCAGAAATCACATAACCACCAAGCA...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
3UTR-3UTR TCA 90 bp GGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTTTTTCTCCAAATTCTTaGTTTATCTTTGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: GKQSKAASVCSQAGVDPSFSPNS*FIFVGH
Trigger: GTGGCCCACAAAGATAAATCAAGAATTTGGAGAAAA...AGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp TTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGTTGGTCCATTTCATCTaGCTAAAGCCATGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: LESCASLPPLNTLSSVSMLVHFI*LKPCSA
Trigger: AGCAGAACATGGCTTTAGTCAGATGAAATGGACCAA...CATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGGTTCTTCCTTTCTTCTaGTGGGTTTGTCCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEVLPFF*WVCPVS
Trigger: AGAAACTGGACAAACCCAGCAGAAGAAAGGAAGAAC...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
3UTR-3UTR GCA 90 bp TCTATAAGATGCTCCTGCCTATTAAATGGAAGGGGTTCAAGAGGATTTTCTGGATGGCTGAATCCACCATaGGTTCTTTTGGCCCTAGTC +
Preference number: 2 (lower is better)
Translates to: SIRCSCLLNGRGSRGFSGWLNPP*VLLALV
Trigger: GACTAGGGCCAAAAGAACGCATGGTGGATTCAGCCA...TCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTGGAAGAAGCCAAATaGCTTTTGTTTGATGTGAAG +
Preference number: 2 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILEEAK*LLFDVK
Trigger: CTTCACATCAAACAAAAGGCATTTGGCTTCTTCCAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR-3UTR CCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTGGCTCCAGGTTCTTaGCACCTAGGTCTTGAAATG +
Preference number: 2 (lower is better)
Translates to: LKVISLHHFLVHVHSFGELAPGS*HLGLEM
Trigger: CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp AACTTGCAGGAAGGGTCAACACTAGGTCGACTAGTGTCAGGATATTTGGATACTTCATCATTAGTTTGGTaGTGGCTCTGTTCACTGGAG +
Preference number: 2 (lower is better)
Translates to: NLQEGSTLGRLVSGYLDTSSLVW*WLCSLE
Trigger: CTCCAGTGAACAGAGCCACCACCAAACTAATGATGA...AGTATCCAAATATCCTGACACTAGTCGACCTAGTGTTGACCCTTCCTGCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CCA 90 bp TCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCGGGTTACTTTGCTCATaGTCCTCATCATTAGTTTGG +
Preference number: 2 (lower is better)
Translates to: SCASLPPLNTLSSVSMDIGLLCS*SSSLVW
Trigger: CCAAACTAATGATGAGGACCATGAGCAAAGTAACCC...GATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CAA 90 bp TCCTGTAATTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTaGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGAATGTCA +
Preference number: 2 (lower is better)
Translates to: SCNSGWVRCIQLLGK*FVPRFRVTKSIRMS
Trigger: TGACATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAATTACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR CAA 90 bp AGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTaGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGTTT +
Preference number: 2 (lower is better)
Translates to: RWLANLLESCASLPP*NTLSSVSMDIFSLF
Trigger: AAACAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR CAA 90 bp TCTAATTTGCACATCCAAATAAAATCTTTGAGGGGACGTCCGGTCTaGGCAATAGCATGGCATGATCTGAATAAGTTCTCTACTCTCCCG +
Preference number: 2 (lower is better)
Translates to: SNLHIQIKSLRGRPV*AIAWHDLNKFSTLP
Trigger: CGGGAGAGTAGAGAACTTATTCAGATCATGCCATGCTATTGCCAAGACCGGACGTCCCCTCAAAGATTTTATTTGGATGTGCAAATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CAA 90 bp GTTTGTACACATGGTTGTATTTCTCTTAATAGTAGGGCCACCTCGTaGTTCTCTCCCTCTATGCTATGGGTACCATCACTTCCAAAACCA +
Preference number: 2 (lower is better)
Translates to: VCTHGCISLNSRATS*FSPSMLWVPSLPKP
Trigger: TGGTTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACTATTAAGAGAAATACAACCATGTGTACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR TCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGTGGTTATGTGATTTCTaGGTTGCAGTTCTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVWLCDF*VAVLPF
Trigger: GAAAGGAAGAACTGCAACTCAGAAATCACATAACCA...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
3UTR-3UTR CCA 90 bp ATAAAAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCATCTCCCTCTATGCTATaGGTACCATCACTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: IKGCFKRTATSIGSRFLASPSML*VPSLPK
Trigger: TTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGA...TGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTTACTCTGTATGTTTaGAAGAAGCCAAATGCCTTT +
Preference number: 2 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFTLYV*KKPNAF
Trigger: AAAGGCATTTGGCTTCTTCCAAACATACAGAGTAAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR CAA 90 bp TATTGCCAGAGGATCATTTCTTTCTACTATCTGTACCCCAACAATTaGACAGTGCACCTTTCCTGCATGTGCAAACTGCACATAGACAAG +
Preference number: 2 (lower is better)
Translates to: YCQRIISFYYLYPNN*TVHLSCMCKLHIDK
Trigger: CTTGTCTATGTGCAGTTTGCACATGCAGGAAAGGTGCACTGTCAAATTGTTGGGGTACAGATAGTAGAAAGAAATGATCCTCTGGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR TCA 90 bp TTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGTTTTCTCCAAATTCTTaGTTTATCTTTGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: LESCASLPPLNTLSSVSMFSPNS*FIFVGH
Trigger: GTGGCCCACAAAGATAAATCAAGAATTTGGAGAAAA...CATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp GCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTCCACGAACTCGGAGTTaGCTGTTAATAAAGATGTTA +
Preference number: 2 (lower is better)
Translates to: ANLLESCASLPPLNTLSSPRTRS*LLIKML
Trigger: TAACATCTTTATTAACAGTCAACTCCGAGTTCGTGG...ACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAAAATGTGCAGTCAGGATaGATACCTCTTTTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKNVQSG*IPLFLQ
Trigger: TTGGAGAAAAAGAGGTATCCATCCTGACTGCACATT...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp AACTTGCAGGAAGGGTCAACACTAGGTCGACTAGTGTCAGGATATTTGGATACTTCCTGTAATTCAGGTTaGGTAAGGTGCATCCAATTA +
Preference number: 2 (lower is better)
Translates to: NLQEGSTLGRLVSGYLDTSCNSG*VRCIQL
Trigger: TAATTGGATGCACCTTACCCAACCTGAATTACAGGA...AGTATCCAAATATCCTGACACTAGTCGACCTAGTGTTGACCCTTCCTGCAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR CAA 90 bp ATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTaGACTGTTAATAAAGATGTTAATTCCTGTAATTCAGGTTGGGTA +
Preference number: 2 (lower is better)
Translates to: IEVTNRNFRQSTNSE*TVNKDVNSCNSGWV
Trigger: TACCCAACCTGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR TCA 90 bp ACACAGGACAGAATGCTAAGGACATTCATGACATCCAACAAGAAGTGGGCAAATTCTCTGAAACAGCCTTaGAGTCTCTTGATAAGATGT +
Preference number: 2 (lower is better)
Translates to: TQDRMLRTFMTSNKKWANSLKQP*SLLIRC
Trigger: ACATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGA...ATTTGCCCACTTCTTGTTGGATGTCATGAATGTCCTTAGCATTCTGTCCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR TCA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGTGTGAAGGAGGTCTTTaGCATCATTGTACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLCEGGL*HHCTEE
Trigger: TTCCTCTGTACAATGATGTCAAAGACCTCCTTCACA...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR TCA 90 bp CTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTATTTTAATATCGAAGGTGAAGGCCTTTaGAAGCAGTTCTCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: LSITSLYMFTPLENYFNIEGEGL*KQFSEH
Trigger: GTGCTCTGAGAACTGCTTTCAAAGGCCTTCACCTTC...GATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR GCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTTACCTGTTACTCTGTaGCTTTTCCTCTTCTCGTCT +
Preference number: 2 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTLPVTL*LFLFSS
Trigger: AGACGAGAAGAGGAAAAGGCACAGAGTAACAGGTAA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR-3UTR GCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATCTATAAGATGCTCCTaGCTATTAAATGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: LKVISLHHFLVHVHSFGESIRCS*LLNGRG
Trigger: ACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAATGTCTCCTCCTACATaGCAAAGAAGTTGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRMSPPT*QRSWAL
Trigger: CAAAGCCCAACTTCTTTGCCATGTAGGAGGAGACAT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR-3UTR CCA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAAGCATTGACTCTAAAGTaGCAAATATGTCAGCAATTG +
Preference number: 2 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKALTLK*QICQQL
Trigger: CAATTGCTGACATATTTGCCACTTTAGAGTCAATGC...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp AGCCTAAAGAAAAACTCTATAAGATGCTCCTGCCTATTAAATGGAAGGGGTTCATACCATGAAAGTGTGTaGCTGAATCCACCATGCGTT +
Preference number: 2 (lower is better)
Translates to: SLKKNSIRCSCLLNGRGSYHESV*LNPPCV
Trigger: AACGCATGGTGGATTCAGCCACACACTTTCATGGTA...TGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGAGTTTTTCTTTAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR GCA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAATCTCTAATTTCAACATaGTCCATTCAGTATCCACTT +
Preference number: 2 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKSLIST*SIQYPL
Trigger: AAGTGGATACTGAATGGAGCATGTTGAAATTAGAGA...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp GCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCAGCATTGACTCTAAAGTaGCAAATATGTCAGCAATTG +
Preference number: 2 (lower is better)
Translates to: ASLPPLNTLSSVSMDIFSALTLK*QICQQL
Trigger: CAATTGCTGACATATTTGCCACTTTAGAGTCAATGC...TGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CCA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAATTTAGTTCTGAATACTaGGCCAATATCAACACCTTT +
Preference number: 2 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKFSSEY*ANINTF
Trigger: AAAGGTGTTGATATTGGCCCAGTATTCAGAACTAAA...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR TCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTTTTAACAATGGTTTTTaGAGCAAAAGTACACAGCCC +
Preference number: 2 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCFNNGF*SKSTQP
Trigger: GGGCTGTGTACTTTTGCTTCAAAAACCATTGTTAAA...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282469.10
3UTR-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCTTGTTTCATATGATTaGAGTTGCCCAAAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAILVSYD*SCPKSE
Trigger: TTCAGACTTTGGGCAACTTCAATCATATGAAACAAG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR-3UTR CCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTTTGTTCCCTTATTCTaGTGGAAAACCAGCTATACT +
Preference number: 2 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTFVPLF*WKTSYT
Trigger: AGTATAGCTGGTTTTCCACCAGAATAAGGGAACAAA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR-3UTR CCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTTAATGCTAGACTTATaGTCCATAGCGGTTAAGGAT +
Preference number: 2 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAILMLDL*SIAVKD
Trigger: ATCCTTAACCGCTATGGACCATAAGTCTAGCATTAA...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR CAA 90 bp CTTTTGGCCCTAGTCTTGTTTGATACATTTGGAGCATTTCCAGCATaGACTCTAAAGTGGCAAATATGTCAGCAATTGAGGAATTTCTAT +
Preference number: 2 (lower is better)
Translates to: LLALVLFDTFGAFPA*TLKWQICQQLRNFY
Trigger: ATAGAAATTCCTCAATTGCTGACATATTTGCCACTTTAGAGTCAATGCTGGAAATGCTCCAAATGTATCAAACAAGACTAGGGCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR GCA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGTCTCTAATTTCAACATaGTCCATTCAGTATCCACTT +
Preference number: 2 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLSLIST*SIQYPL
Trigger: AAGTGGATACTGAATGGAGCATGTTGAAATTAGAGA...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR GCA 90 bp CTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTATTTTAATATCTCAGGTTGGGTAAGGTaGATCCAATTACTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LSITSLYMFTPLENYFNISGWVR*IQLLGK
Trigger: CTTTCCTAGTAATTGGATGCACCTTACCCAACCTGA...GATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTTGGTCTCTTAAATTTTaGTCTCCATCCTTATCTTGG +
Preference number: 2 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCWSLKF*SPSLSW
Trigger: CCAAGATAAGGATGGAGACCAAAATTTAAGAGACCA...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508817.1
3UTR-3UTR GCA 90 bp AAAGAAAAACTCTATAAGATGCTCCTGCCTATTAAATGGAAGGGGTTCAAGAGGCTTTATTTCCTATTATaGCTTCTAGAACAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: KEKLYKMLLPIKWKGFKRLYFLL*LLEQGE
Trigger: CTCTCCTTGTTCTAGAAGGCATAATAGGAAATAAAG...CCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGAGTTTTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637061.1
3UTR-3UTR CCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAATATGTTTACTGAGATaGCAGGAGCTTGTTTCTATA +
Preference number: 2 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRICLLR*QELVSI
Trigger: TATAGAAACAAGCTCCTGCCATCTCAGTAAACATAT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR CCA 72 bp CACACTGAGGGCCCTGTAGACTCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTA +
Preference number: 3 (lower is better)
Translates to: HTEGPVDSFHGV*VASKVKQHLCV
Trigger: TACACACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACAGGGCCCTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CAA 90 bp CTTCCACGGTGTCTGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAAGCCCTCACCACATTTaGGCTGGCATCTCTGAAACA +
Preference number: 3 (lower is better)
Translates to: LPRCLGGKQSKAASVCSQSPHHI*AGISET
Trigger: TGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGCT...TTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp AGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAGGTCTTGAAATGCTGGACCTGCATCAGTaGAGGAGGTCTTTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: REQRLQLAPGSWHLGLEMLDLHQ*RRSFLH
Trigger: GTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAG...CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CAA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGGAACAGCGACTTCAATaGGCTCCAGGTTCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFEEQRLQ*APGSWH
Trigger: GTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTC...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CAA 90 bp TCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCAGTAGGGCCACCTCGTaGTTCTCTCCCTCTATGCTA +
Preference number: 3 (lower is better)
Translates to: SLSLGGWQIYWSPVLHFPSRATS*FSPSML
Trigger: TAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACT...GGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CAA 90 bp GCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATAGTCAGCAAATAAGCCCTCACCACATTTaGGCTGGCATCTCTGAAACA +
Preference number: 3 (lower is better)
Translates to: AASVCSQAGVDPSHSQQISPHHI*AGISET
Trigger: TGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGCT...TATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp ATAAAAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCAAGGGGACGTCCGGTCTaGGCAATAGCATGGCATGAT +
Preference number: 3 (lower is better)
Translates to: IKGCFKRTATSIGSRFLARGRPV*AIAWHD
Trigger: ATCATGCCATGCTATTGCCAAGACCGGACGTCCCCT...TGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR TCA 72 bp CTGAGTGCAGTTGCCGAACAATTGCAGGATATCCCTTaGGAAAGTTCTGGAGGGCTGCCTGTAATCCATGAA +
Preference number: 3 (lower is better)
Translates to: LSAVAEQLQDIP*ESSGGLPVIHE
Trigger: TTCATGGATTACAGGCAGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTGCACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 72 bp AAATCTTTGAGGGGACGTCCGGTCTTGGCAATAGCATaGCATGATCTGAATAAGTTCTCTACTCTCCCGAGG +
Preference number: 3 (lower is better)
Translates to: KSLRGRPVLAIA*HDLNKFSTLPR
Trigger: CCTCGGGAGAGTAGAGAACTTATTCAGATCATGCCATGCTATTGCCAAGACCGGACGTCCCCTCAAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 72 bp AGTAGGGCCACCTCGTTGTTCTCTCCCTCTATGCTATaGGTACCATCACTTCCAAAACCAACCAGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: SRATSLFSPSML*VPSLPKPTSFF
Trigger: AAAGAAGCTGGTTGGTTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 72 bp GAAGGGACTCCAGAAGTTCTTTGGGTTTCTTTTGACTaGTGTCACTTTTGCCTCTGCCTGCTGAGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: EGTPEVLWVSFD*CHFCLCLLSAV
Trigger: AACTGCACTCAGCAGGCAGAGGCAAAAGTGACACCAGTCAAAAGAAACCCAAAGAACTTCTGGAGTCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CAA 90 bp CCTCAGGTTCAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTTTTAACAATGTCAGCTaGGAGAAGGGACTCCAGAAG +
Preference number: 3 (lower is better)
Translates to: PQVQEIPQLDLHQLRRSFFNNVS*EKGLQK
Trigger: CTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAA...AAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTGAACCTGAGG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp AGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAGGTCTTGAAATGTGGCTGGCAAATCTATaGGAGTCCTGTGCTTCACTT +
Preference number: 3 (lower is better)
Translates to: REQRLQLAPGSWHLGLEMWLANL*ESCASL
Trigger: AAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCA...CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CAA 90 bp GGCAGTTACCATGAAAGTGTGTGGCTGAATCCACCATGCGTTCTTTTGGCCCTAGGAGCATTTCCAGCATaGACTCTAAAGTGGCAAATA +
Preference number: 3 (lower is better)
Translates to: GSYHESVWLNPPCVLLALGAFPA*TLKWQI
Trigger: TATTTGCCACTTTAGAGTCAATGCTGGAAATGCTCC...TAGGGCCAAAAGAACGCATGGTGGATTCAGCCACACACTTTCATGGTAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGGCTTCACTTCCCCCTTaGAACACTTTGAGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFEASLPP*NTLSSV
Trigger: AACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CAA 90 bp AGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATAATTGCAGGATATCCCTaGAGAAAGTTCTGGAGGGCT +
Preference number: 3 (lower is better)
Translates to: SKVKQHLCVVKLGWILLIIAGYP*RKFWRA
Trigger: AGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAAT...TATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR GCA 72 bp TTAATAGTAGGGCCACCTCGTTGTTCTCTCCCTCTATaGTATGGGTACCATCACTTCCAAAACCAACCAGCT +
Preference number: 3 (lower is better)
Translates to: LIVGPPRCSLPL*YGYHHFQNQPA
Trigger: AGCTGGTTGGTTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 72 bp AGCCCTCTGCATAAATGTTCTCTATCTTTAGGTGGCTaGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCC +
Preference number: 3 (lower is better)
Translates to: SPLHKCSLSLGG*QIYWSPVLHFP
Trigger: GGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGAACATTTATGCAGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR CCA 72 bp GGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTaGTGGCTCTGTTCACTGGAGAGCTACTTGTTGCTT +
Preference number: 3 (lower is better)
Translates to: GLLCSWSSSLVW*WLCSLESYLLL
Trigger: AAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CAA 90 bp AAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAGGAGCATTTCCAGCATaGACTCTAAAGTGGCAAATA +
Preference number: 3 (lower is better)
Translates to: KDASREQRLQLAPGSWHLGAFPA*TLKWQI
Trigger: TATTTGCCACTTTAGAGTCAATGCTGGAAATGCTCC...TAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAATCAAAATAACACCATaGTGTAGCAGCATACAGCTC +
Preference number: 3 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIIKITP*CSSIQL
Trigger: GAGCTGTATGCTGCTACACAATGGTGTTATTTTGAT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR CCA 72 bp ATAAGTTCTCTACTCTCCCGAGGGTTACTTTGCTCATaGTCCTCATCATTAGTTTGGTGGTGGCTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: ISSLLSRGLLCS*SSSLVWWWLCS
Trigger: TGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGAGAGTAGAGAACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CAA 90 bp GTTTCTCACAGCAGAAATGTTTTCTTTCCCTCTGAGGCAGTTACCATGAAAGTGCCACCATGCGTTCTTTaGGCCCTAGTCTTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: VSHSRNVFFPSEAVTMKVPPCVL*ALVLFD
Trigger: ATCAAACAAGACTAGGGCCAAAAGAACGCATGGTGG...CACTTTCATGGTAACTGCCTCAGAGGGAAAGAAAACATTTCTGCTGTGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp AAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAATCTCTGAAACAGCCTaGAAGTCTCTTGATAAGATG +
Preference number: 3 (lower is better)
Translates to: KDASREQRLQLAPGSWHLISETA*KSLDKM
Trigger: CATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGAT...TAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp AGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAGGTCTTGAAATGTCACTAAGTTTCACATaGGCAGCTTCTAATACTGGT +
Preference number: 3 (lower is better)
Translates to: REQRLQLAPGSWHLGLEMSLSFT*AASNTG
Trigger: ACCAGTATTAGAAGCTGCCAATGTGAAACTTAGTGA...CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAACCCCCTTTGAACACTTaGAGTAGTGTTTCCATGGAC +
Preference number: 3 (lower is better)
Translates to: LKVISLHHFLVHVHSFGEPPLNT*SSVSMD
Trigger: GTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGG...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR-3UTR CAA 90 bp TGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTGTCCTCATCATTAGTTaGGTGGTGGCTCTGTTCACT +
Preference number: 3 (lower is better)
Translates to: CASLPPLNTLSSVSMDIFVLIIS*VVALFT
Trigger: AGTGAACAGAGCCACCACCAAACTAATGATGAGGAC...AAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CAA 90 bp TCTATAAGATGCTCCTGCCTATTAAATGGAAGGGGTTCAAGAGGATTTTCTGGACTCCCGAGGGTTACTTaGCTCATGGTCCTCATCATT +
Preference number: 3 (lower is better)
Translates to: SIRCSCLLNGRGSRGFSGLPRVT*LMVLII
Trigger: AATGATGAGGACCATGAGCAAAGTAACCCTCGGGAG...TCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTTTACTCTGTATGTTaGGAAGAAGCCAAATGCCTT +
Preference number: 3 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFYSVC*EEAKCL
Trigger: AAGGCATTTGGCTTCTTCCAAACATACAGAGTAAAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR TCA 72 bp GCAGAAATGTTTTCTTTCCCTCTGAGGCAGTTACCATaGAAGTGTGTGGCTGAATCCACCATGCGTTCTTTT +
Preference number: 3 (lower is better)
Translates to: AEMFSFPLRQLP*KCVAESTMRSF
Trigger: AAAAGAACGCATGGTGGATTCAGCCACACACTTTCATGGTAACTGCCTCAGAGGGAAAGAAAACATTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR GCA 72 bp GGCAGTTACCATGAAAGTGTGTGGCTGAATCCACCATaGGTTCTTTTGGCCCTAGTCTTGTTTGATACATTT +
Preference number: 3 (lower is better)
Translates to: GSYHESVWLNPP*VLLALVLFDTF
Trigger: AAATGTATCAAACAAGACTAGGGCCAAAAGAACGCATGGTGGATTCAGCCACACACTTTCATGGTAACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCAGACGTGTATCCTCTaGATCTGCCTGAAGTTACCT +
Preference number: 3 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIQTCIL*ICLKLP
Trigger: AGGTAACTTCAGGCAGATCAAGAGGATACACGTCTG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR-3UTR CAA 90 bp GTTTCTCACAGCAGAAATGTTTTCTTTCCCTCTGAGGCAGTTACCATGAAAGTGTTTAACAATGTCAGCTaGGAGAAGGGACTCCAGAAG +
Preference number: 3 (lower is better)
Translates to: VSHSRNVFFPSEAVTMKVFNNVS*EKGLQK
Trigger: CTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAA...CACTTTCATGGTAACTGCCTCAGAGGGAAAGAAAACATTTCTGCTGTGAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAACTTTTGGCCCTAGTCTaGTTTGATACATTTGGAGCA +
Preference number: 3 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKLLALV*FDTFGA
Trigger: TGCTCCAAATGTATCAAACAAGACTAGGGCCAAAAG...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp ATAAAAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCATTTCCTCTGTATGTCTaGAAGGTGATCTCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: IKGCFKRTATSIGSRFLAFPLYV*KVISLH
Trigger: ATGGAGAGAGATCACCTTCAAGACATACAGAGGAAA...TGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp CTGGTTCATAATGTGCAGTCAGGATGGATACCTCTTTTTCTCCAAATTCTTGATCTGTACCCCAACAATTaGACAGTGCACCTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: LVHNVQSGWIPLFLQILDLYPNN*TVHLSC
Trigger: GCAGGAAAGGTGCACTGTCAAATTGTTGGGGTACAG...ATCAAGAATTTGGAGAAAAAGAGGTATCCATCCTGACTGCACATTATGAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CCA 72 bp TTCAGGAAATGGCTCAAATACATAGATACTCTTGACTaGAGCAAGCTGAGGAGGAGCTTTAACCTAGAGTCA +
Preference number: 3 (lower is better)
Translates to: FRKWLKYIDTLD*SKLRRSFNLES
Trigger: TGACTCTAGGTTAAAGCTCCTCCTCAGCTTGCTCCAGTCAAGAGTATCTATGTATTTGAGCCATTTCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR-3UTR CAA 90 bp ATAAAAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCATCACTAAGTTTCACATaGGCAGCTTCTAATACTGGT +
Preference number: 3 (lower is better)
Translates to: IKGCFKRTATSIGSRFLASLSFT*AASNTG
Trigger: ACCAGTATTAGAAGCTGCCAATGTGAAACTTAGTGA...TGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTTCCTCTGTATGTCTaGAAGGTGATCTCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: LKVISLHHFLVHVHSFGEFPLYV*KVISLH
Trigger: ATGGAGAGAGATCACCTTCAAGACATACAGAGGAAA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGAAGCCAAATGCCTTTaGTTTGATGTGAAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNEAKCL*FDVKRS
Trigger: ACTTCTCTTCACATCAAACAAAAGGCATTTGGCTTC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR TCA 72 bp CTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTaGCTGTTAATAAAGATGTTAATTCCTGTAATTCAG +
Preference number: 3 (lower is better)
Translates to: LTGTSASPRTRS*LLIKMLIPVIQ
Trigger: CTGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR CCA 72 bp TCCAACAAGAAGTGGGCAAATTTAACAATGTCAGCTTaGAGAAGGGACTCCAGAAGTTCTTTGGGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: SNKKWANLTMSA*RRDSRSSLGFF
Trigger: AAAGAAACCCAAAGAACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAATTTGCCCACTTCTTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp CTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTATTTTAATATCCCACCATGCGTTCTTTaGGCCCTAGTCTTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: LSITSLYMFTPLENYFNIPPCVL*ALVLFD
Trigger: ATCAAACAAGACTAGGGCCAAAAGAACGCATGGTGG...GATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR-3UTR CAA 90 bp TCTATAAGATGCTCCTGCCTATTAAATGGAAGGGGTTCAAGAGGATTTTCTGGATCCACGAACTCGGAGTaGACTGTTAATAAAGATGTT +
Preference number: 3 (lower is better)
Translates to: SIRCSCLLNGRGSRGFSGSTNSE*TVNKDV
Trigger: AACATCTTTATTAACAGTCAACTCCGAGTTCGTGGA...TCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR TCA 72 bp AGCTTCTTTGCCCAGTCTTGGCTCGACAGTCTAAGTTaGAGATTTATCTCTAGAGTTTTCTCAATGGCATTT +
Preference number: 3 (lower is better)
Translates to: SFFAQSWLDSLS*RFISRVFSMAF
Trigger: AAATGCCATTGAGAAAACTCTAGAGATAAATCTTCAACTTAGACTGTCGAGCCAAGACTGGGCAAAGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAATGGTTGCTGTTAATTaGTTCCCTTATTCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRMVAVN*FPYSGG
Trigger: TCCACCAGAATAAGGGAACAAATTAACAGCAACCAT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR-3UTR CAA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTACATGGCAAAGAAGTaGGGCTTTGTAACAACTACG +
Preference number: 3 (lower is better)
Translates to: TQMDTDTLPISCITTIKHYMAKK*GFVTTT
Trigger: CGTAGTTGTTACAAAGCCCAACTTCTTTGCCATGTA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
3UTR GCA 72 bp CACACACAAATGGATACTGACACTCTACCAATATCATaGATTACAACAATTAAGCACTTCACTTTTGTCATT +
Preference number: 3 (lower is better)
Translates to: HTQMDTDTLPIS*ITTIKHFTFVI
Trigger: AATGACAAAAGTGAAGTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGTGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGCAATCCTGCGCTCCTaGTGGGACTGCCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVAILRS*WDCRIS
Trigger: GCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGTTCCAACAGCCACACTaGGGGCCCTGTAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: LELLKGLKELLLQGNGPRFQQPH*GPCRLL
Trigger: AAGGAGTCTACAGGGCCCTCAGTGTGGCTGTTGGAA...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCGCCAGGAACCAAGCCTaGCAGCCCGCGTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSARNQA*QPASSC
Trigger: ACAGGAGGACGCGGGCTGGCAGGCTTGGTTCCTGGC...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCATCCTGCGCTCCTGCTaGGACTGCCGCATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSILRSC*DCRISR
Trigger: CCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGAT...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGCTGCCAGGTGTCCATaGCCAACTTTTCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVAARCP*PTFHRP
Trigger: AGGCCGATGAAAAGTTGGTCATGGACACCTGGCAGC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGACAGCCTTGAACTTCTaGAGGGTCTCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LELLKGLKELLLQGNGPRTALNF*RVSRSS
Trigger: GGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGT...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCGCAATCCTGCGCTCCTaGTGGGACTGCCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSAILRS*WDCRIS
Trigger: GCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGC...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAATGTCAAGCCGCTCCTaGTCCGCCTCTTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIMSSRS*SASSFR
Trigger: CCGGAAGGAAGAGGCGGAGCAGGAGCGGCTTGACAT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCACAGCCTTGAACTTCTaGAGGGTCTCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTTALNF*RVSRSS
Trigger: GGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGT...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATACATGGTTCAGCCGGTaGCTCAGACCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNTWFSR*LRPQAG
Trigger: CCCCGCCTGCGGTCTGAGGCACCGGCTGAACCATGT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACGAACATGCATGAGCTaGACGGCAATCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIRTCMS*TAILRS
Trigger: GGAGCGCAGGATTGCCGTGCAGCTCATGCATGTTCG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTGATGGTGCCCAACTaGTCCTTATCCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVVMVPN*SLSTAL
Trigger: CAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCAC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTCCCCCAGGCTAGAGTaGAGTGGGGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSSPRLE*SGAISA
Trigger: AGCCGAGATTGCCCCACTGCACTCTAGCCTGGGGGA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCTCTGCCTGCTGAGTaGAGTTGCCGAACAATTGCA +
Preference number: 4 (lower is better)
Translates to: PPREWAKALRLLTGTSASPLPAE*SCRTIA
Trigger: TGCAATTGTTCGGCAACTGCACTCAGCAGGCAGAGG...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCGCAAGCACAGTATGCTaGTCTTCCCTCAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTASTVC*SSLRCL
Trigger: CAGGCATCTGAGGGAAGACCAGCATACTGTGCTTGC...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCATCAGGAAGGGAGTTaGAATCAGCCTGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTHQEGS*NQPAIE
Trigger: CTCAATGGCAGGCTGATTTCAACTCCCTTCCTGATG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTCAGCAGCCACCATGTaGGATACTGCTAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTSAATM*DTAKEA
Trigger: GGCTTCTTTAGCAGTATCTCACATGGTGGCTGCTGA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp GTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTTTCCAACAGCCACACTaGGGGCCCTGTAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: VASKVKQHLCVVKLGWILFQQPH*GPCRLL
Trigger: AAGGAGTCTACAGGGCCCTCAGTGTGGCTGTTGGAA...AAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGGACCTGCATCAGTTaGGGAGGTCTTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTWTCIS*GGLFCT
Trigger: AGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTTGGACCTGCATCAGTTaGGGAGGTCTTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: PPREWAKALRLLTGTSASWTCIS*GGLFCT
Trigger: AGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCA...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTGTAGTGCTACAGTATaGAAGGGGGTTGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVCSATV*KGVGVS
Trigger: GCTGACACCAACCCCCTTTCATACTGTAGCACTACA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp ATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAAGGTGAAGGCCTTTaGAAGCAGTTCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: MGQGIEVTNRNFRQSTNSEGEGL*KQFSEH
Trigger: GTGCTCTGAGAACTGCTTTCAAAGGCCTTCACCTTC...CGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGGCTGCACGGCAATCCTaGGCTCCTGCTGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERAARQS*APAGTA
Trigger: GGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGC...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCCAGCCTGCATATACTaGTCAAAAGTGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTPACIY*SKVMVP
Trigger: GGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGCCTGCTGAGTGCAGTTaGCGAACAATTGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: LELLKGLKELLLQGNGPRPAECS*RTIAGY
Trigger: ATATCCTGCAATTGTTCGGCAACTGCACTCAGCAGG...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGATCCTGCGCTCCTGCTaGGACTGCCGCATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERILRSC*DCRISR
Trigger: CCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGAT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CAACTGCTCCTTATCCACAGCCTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCCTCCTCCAAGGGAATaGGCCAAGGCATTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: QLLLIHSLELLKGLKELLPPPRE*AKALRL
Trigger: TAACCTCAATGCCTTGGCCCATTCCCTTGGAGGAGG...GAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGGAGCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTSFHGV*VASKVK
Trigger: CTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTTCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PPREWAKALRLLTGTSASSFHGV*VASKVK
Trigger: CTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGA...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACCATGGGCCACATTCTaGTCAAACTGCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIPWATF*SNCTPR
Trigger: TCTGGGTGTGCAGTTTGATCAGAATGTGGCCCATGG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGCTTCAGCAACTGTTCTaGTTTTGCACCAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVLQQLF*FCTKLS
Trigger: GCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAG...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCCTTATCCACAGCCTTaGACTTCTGAAGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTPYPQP*TSEGSQ
Trigger: TTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CAACTGCTCCTTATCCACAGCCTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCTGGACCTGCATCAGTTaGGGAGGTCTTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QLLLIHSLELLKGLKELLWTCIS*GGLFCT
Trigger: AGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCA...GAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGGAGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp TGTAGACTCCTTCCACGGTGTCTGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGGAAGGTGAAGGCCTTTaGAAGCAGTTCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: CRLLPRCLGGKQSKAASVEGEGL*KQFSEH
Trigger: GTGCTCTGAGAACTGCTTTCAAAGGCCTTCACCTTC...CACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTTTCCTGTCTCCTATTTaGGAAGGCATCACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: PPREWAKALRLLTGTSASFLSPI*EGITGR
Trigger: TCGACCTGTGATGCCTTCTCAAATAGGAGACAGGAA...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp CCAGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACAGCTGCCTGTAATCCATaGAGCCACTTCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PACIYCSKVMVPNCSLSTAACNP*SHFLSP
Trigger: AGGAGACAGGAAGTGGCTTCATGGATTACAGGCAGC...TGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACACTTGACTTCCCCCTaGCTTCACTCCATGCTTACG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIHLTSP*LHSMLT
Trigger: CGTAAGCATGGAGTGAAGTCAGGGGGAAGTCAAGTG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTGCCAGGAACCAAGCCTaGCAGCCCGCGTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCARNQA*QPASSC
Trigger: ACAGGAGGACGCGGGCTGGCAGGCTTGGTTCCTGGC...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCGCTCCTGCTGGGACTaGCGCATCAGCCGGTTAATC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNRSCWD*RISRLI
Trigger: GATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCGAACATGCATGAGCTaGACGGCAATCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISERTCMS*TAILRS
Trigger: GGAGCGCAGGATTGCCGTGCAGCTCATGCATGTTCG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp GCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTCCTGCTGAGTGCAGTTaGCGAACAATTGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: AKALRLLTGTSASPRTRSPAECS*RTIAGY
Trigger: ATATCCTGCAATTGTTCGGCAACTGCACTCAGCAGG...ACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp GGCAGTTACCATGAAAGTGTGTGGCTGAATCCACCATGCGTTCTTTTGGCCCTATGTCACTTTTGCCTCTaGCTGCTGAGTGCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GSYHESVWLNPPCVLLALCHFCL*LLSAVA
Trigger: GGCAACTGCACTCAGCAGGCAGAGGCAAAAGTGACA...TAGGGCCAAAAGAACGCATGGTGGATTCAGCCACACACTTTCATGGTAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTTGTCAGACGTTGCATaGTTTGCATCTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVLSDVA*FASPLQ
Trigger: CTGGAGTGGAGATGCAAACCATGCAACGTCTGACAA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAGCAAGCACAGTATGCTaGTCTTCCCTCAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIASTVC*SSLRCL
Trigger: CAGGCATCTGAGGGAAGACCAGCATACTGTGCTTGC...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp GCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTGGCTGGCAAATCTATTaGAGTCCTGTGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: AKALRLLTGTSASPRTRSGWQIY*SPVLHF
Trigger: GAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCC...ACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp ATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGTTGGCTCCAGGTTCTTaGCACCTAGGTCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: MGQGIEVTNRNFRQSTNSLAPGS*HLGLEM
Trigger: CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAA...CGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCAGTAGGAGTTTTTaGAGCCACATGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTCSRSF*SHMALM
Trigger: CATCAAAGCCATGTGGCTTCAAAAACTCCTACTGCA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCGAGAACCTTTTCTTTTaGGTGCGGTCTCACCTTTCT +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTENLFF*VRSHLS
Trigger: AGAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTC...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCACTATTGCAACAGGTaGTGTATCTGTAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTHYCNR*CICRVS
Trigger: GCTGACTCTACAGATACATCACCTGTTGCAATAGTG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAATAGACCCATTCTTCTaGTCCTGGCTTAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIIDPFF*SWLRWL
Trigger: CAGCCACCTAAGCCAGGATCAGAAGAATGGGTCTAT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVAISKN*SRRLSS
Trigger: GCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGTTCCAACAGCCACACTaGGGGCCCTGTAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVFQQPH*GPCRLL
Trigger: AAGGAGTCTACAGGGCCCTCAGTGTGGCTGTTGGAA...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp TGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCTTTGGCTGGCATCTCTaGAACAGCCTTGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: WVASKVKQHLCVVKLGWIFGWHL*NSLEVS
Trigger: AGAGACTTCAAGGCTGTTTCAGAGATGCCAGCCAAA...GATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTAACATGGTTCAGCCGGTaGCTCAGACCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLTWFSR*LRPQAG
Trigger: CCCCGCCTGCGGTCTGAGGCACCGGCTGAACCATGT...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAACATGGTTCAGCCGGTaGCTCAGACCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRTWFSR*LRPQAG
Trigger: CCCCGCCTGCGGTCTGAGGCACCGGCTGAACCATGT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCGTCTTTTCTCCCTTTaGTCTCGTGCAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTRLFSL*SRAKAS
Trigger: AGATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGCGCTCCTGCTGGGACTaGCGCATCAGCCGGTTAATC +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGRSCWD*RISRLI
Trigger: GATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCG...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCGCTCCTGCTGGGACTaGCGCATCAGCCGGTTAATC +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERRSCWD*RISRLI
Trigger: GATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTAGCTGCACGGCAATCCTaGGCTCCTGCTGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLAARQS*APAGTA
Trigger: GGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGC...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAGCTGCACGGCAATCCTaGGCTCCTGCTGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRAARQS*APAGTA
Trigger: GGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGC...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGCTGCACGGCAATCCTaGGCTCCTGCTGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVAARQS*APAGTA
Trigger: GGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCGCAGCACATCAGGAATaGTCTTTCCTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTAAHQE*SFLSSA
Trigger: TGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGC...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGATGTCAAGCCGCTCCTaGTCCGCCTCTTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERMSSRS*SASSFR
Trigger: CCGGAAGGAAGAGGCGGAGCAGGAGCGGCTTGACAT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACGGTTCAGCTCTGCCTaGATCAGGGAAAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIRFSSA*IREKKW
Trigger: CCATTTCTTTTCCCTGATGCAGGCAGAGCTGAACCG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGTCAGGTTGGGTAAGGTaGATCCAATTACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LELLKGLKELLLQGNGPRSGWVR*IQLLGK
Trigger: CTTTCCTAGTAATTGGATGCACCTTACCCAACCTGA...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp TCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCGTGATGGTGCCCAACTaGTCCTTATCCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLSLGGWQIYWSPVLHFPVMVPN*SLSTAL
Trigger: CAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCAC...GGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTCTATTGGAGTCCTGTaGTTCACTTCCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVSIGVL*FTSPFE
Trigger: TTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp ATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGTCTATTGGAGTCCTGTaGTTCACTTCCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: MGQGIEVTNRNFRQSTNSSIGVL*FTSPFE
Trigger: TTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGA...CGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTGTCACTTTTGCCTCTaGCTGCTGAGTGCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFECHFCL*LLSAVA
Trigger: GGCAACTGCACTCAGCAGGCAGAGGCAAAAGTGACA...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp CCTCAGGTTCAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTTGGCTGAATCCACCATaGGTTCTTTTGGCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: PQVQEIPQLDLHQLRRSFWLNPP*VLLALV
Trigger: GACTAGGGCCAAAAGAACGCATGGTGGATTCAGCCA...AAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTGAACCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCGGCAACCCTTTGCTATaGAAGCGTATCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSGNPLL*KRIQAG
Trigger: TCCAGCCTGGATACGCTTCCATAGCAAAGGGTTGCC...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAATCCTGCGCTCCTGCTaGGACTGCCGCATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVILRSC*DCRISR
Trigger: CCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGAT...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCATCCTGCGCTCCTGCTaGGACTGCCGCATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVILRSC*DCRISR
Trigger: CCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGAT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGAGGAGGTGTAGGAAGTaGAAGCTCAGCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISERRCRK*KLSQGS
Trigger: GCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCAGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACAGTAGTCAAGCTGGGGTaGATCCTTCTCATAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PACIYCSKVMVPNCSLSTVVKLG*ILLIVS
Trigger: GCTGACTATGAGAAGGATCCACCCCAGCTTGACTAC...TGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp CCAGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACATCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PACIYCSKVMVPNCSLSTSFHGV*VASKVK
Trigger: CTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGA...TGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCCTTCAACTCCTTGTTaGGCCACTGGCACAGGATCT +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVPSTPC*ATGTGS
Trigger: AGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCATGCCGAACATGCATaGGCTGCACGGCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERHAEHA*AARQSC
Trigger: GCAGGATTGCCGTGCAGCTCATGCATGTTCGGCATG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGACAAAATCTTGCTTGTaGTCCGGACGCTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVTKSCL*SGRFRN
Trigger: GTTTCTAAAGCGTCCGGATCACAAGCAAGATTTTGT...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGTATACTGCTCAAAAGTaGTGGTGCCCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QEIPQLDLHQLRRSFLHLYTAQK*WCPTAP
Trigger: AGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATA...CAAGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp ATAAAAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCATTCCAACAGCCACACTaGGGGCCCTGTAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: IKGCFKRTATSIGSRFLAFQQPH*GPCRLL
Trigger: AAGGAGTCTACAGGGCCCTCAGTGTGGCTGTTGGAA...TGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTTGGAATGGAAGCTTTaGCTTGTTGGAAGACATGAG +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVLEWKL*LVGRHE
Trigger: CTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAGACGTTGCATGGTTTaGATCTCCACTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIRRCMV*ISTPVS
Trigger: ACTGACTGGAGTGGAGATGCAAACCATGCAACGTCT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTAGCAATCCTGCGCTCCTaGTGGGACTGCCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLAILRS*WDCRIS
Trigger: GCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGC...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGCAATCCTGCGCTCCTaGTGGGACTGCCGCATCAGC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVAILRS*WDCRIS
Trigger: GCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGCTAAAGAAGCCTGCTaGCAGGTGTCCATGACCAAC +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVAKEAC*QVSMTN
Trigger: GTTGGTCATGGACACCTGGCAGCAGGCTTCTTTAGC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGACTGCTAAAGAAGCCTaGTGCCAGGTGTCCATGACC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISETAKEA*CQVSMT
Trigger: GGTCATGGACACCTGGCAGCAGGCTTCTTTAGCAGT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTTCAGGTTGGGTAAGGTaGATCCAATTACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PPREWAKALRLLTGTSASSGWVR*IQLLGK
Trigger: CTTTCCTAGTAATTGGATGCACCTTACCCAACCTGA...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGCCAGCCTGCATATACTaGTCAAAAGTGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFEPACIY*SKVMVP
Trigger: GGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACCTGCTGAGTGCAGTTaGCGAACAATTGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIPAECS*RTIAGY
Trigger: ATATCCTGCAATTGTTCGGCAACTGCACTCAGCAGG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTCGTGGGCTATTAACTaGTCCATTAACAATTTCCGC +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTSWAIN*SINNFR
Trigger: GCGGAAATTGTTAATGGACCAGTTAATAGCCCACGA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACATCGGCCTCAAAGTTaGACTCAACGTTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIHRPQS*TQRFLG
Trigger: CCCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCCTCCTCCAAGGGAATaGGCCAAGGCATTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVPPPRE*AKALRL
Trigger: TAACCTCAATGCCTTGGCCCATTCCCTTGGAGGAGG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGTAGTCAAGCTGGGGTaGATCCTTCTCATAGTCAGC +
Preference number: 4 (lower is better)
Translates to: VAGKSIGVLCFTSPFEHFVVKLG*ILLIVS
Trigger: GCTGACTATGAGAAGGATCCACCCCAGCTTGACTAC...AAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCGGTCTTTTCTGCACTTaGAATGGAAGCTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTGLFCT*NGSFDL
Trigger: CAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACC...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTCTATCTTTAGGTGGCTaGCAAATCTATTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AKALRLLTGTSASPRTRSLSLGG*QIYWSP
Trigger: AGGACTCCAATAGATTTGCCAGCCACCTAAAGATAG...ACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp ATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGCTATCTTTAGGTGGCTaGCAAATCTATTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MGQGIEVTNRNFRQSTNSLSLGG*QIYWSP
Trigger: AGGACTCCAATAGATTTGCCAGCCACCTAAAGATAG...CGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp AGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACAGCTTGGCTCCAGGTTCTTaGCACCTAGGTCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: SLHILLKSDGAQLLLIHSLAPGS*HLGLEM
Trigger: CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAA...GCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp AGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAGGTCTTGAAATGGGTGGCTCTGTTCACTaGAGAGCTACTTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: REQRLQLAPGSWHLGLEMGGSVH*RATCCF
Trigger: GAAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACC...CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCATTAGTTTGGTGGTaGCTCTGTTCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISLVWW*LCSLES
Trigger: GCTCTCCAGTGAACAGAGCCACCACCAAACTAATGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTAGGTCTTGAAATGCCCTTGAGAAAGTTCTaGAGGGCTGCCTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: REQRLQLAPGSWHLGLEMPLRKF*RAACNP
Trigger: TGGATTACAGGCAGCCCTCCAGAACTTTCTCAAGGG...CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR CAA 72 bp GGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTaGCAGTTCTTCCTTTCTTCTGCTGGGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPDLLGGYVISE*QFFLSSAGFVQ
Trigger: CTGGACAAACCCAGCAGAAGAAAGGAAGAACTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
3UTR CAA 72 bp CCGAGGGTTACTTTGCTCATGGTCCTCATCATTAGTTaGGTGGTGGCTCTGTTCACTGGAGAGCTACTTGTT +
Preference number: 4 (lower is better)
Translates to: PRVTLLMVLIIS*VVALFTGELLV
Trigger: AACAAGTAGCTCTCCAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCCTTCAACTCCTTGTTaGGCCACTGGCACAGGATCT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNPSTPC*ATGTGS
Trigger: AGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGATTAAGTTTGGCACTTaGAACCCTGCTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVIKFGT*NPAVQK
Trigger: TTTTTGGACAGCAGGGTTTCAAGTGCCAAACTTAAT...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTCATGCCGAACATGCATaGGCTGCACGGCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTHAEHA*AARQSC
Trigger: GCAGGATTGCCGTGCAGCTCATGCATGTTCGGCATG...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTTTCAGCTAGCCTGTaGAGAATATGGCCCAGTATG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFSASL*RIWPSM
Trigger: CATACTGGGCCATATTCTTCACAGGCTAGCTGAAAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTCTTTCCACTTCTGTaGGGTTTCTATTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFFPLL*GFYCSL
Trigger: CAGGCTGCAATAGAAACCTCACAGAAGTGGAAAGAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGTAGAGTCAGCAGGTaGTTTCTTTACTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTCRVSR*FLYWYF
Trigger: AAAGTACCAGTAAAGAAATCACCTGCTGACTCTACA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACACTATTGCAACAGGTaGTGTATCTGTAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIHYCNR*CICRVS
Trigger: GCTGACTCTACAGATACATCACCTGTTGCAATAGTG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGATAGACCCATTCTTCTaGTCCTGGCTTAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEIDPFF*SWLRWL
Trigger: CAGCCACCTAAGCCAGGATCAGAAGAATGGGTCTAT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGAGATCATTCACTCGTTaGTGTAGTTCAGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVRSFTR*CSSAFV
Trigger: AACAAAGGCTGAACTACATCAACGAGTGAATGATCT...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTTGGCTGGCATCTCTGACAGCCTTGAACTTCTaGAGGGTCTCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLKLPITVALTTFWLASLTALNF*RVSRSS
Trigger: GGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGT...CAGAGATGCCAGCCAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGACTTGTTGGAAGACATaGGTTCCAACAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFETCWKT*VPTATL
Trigger: CAGTGTGGCTGTTGGAACTCATGTCTTCCAACAAGT...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTGGTTATGTGATTTCTaGGTTGCAGTTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVWLCDF*VAVLPF
Trigger: GAAAGGAAGAACTGCAACTCAGAAATCACATAACCA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAGGCCCTAGTCTTGTTTaGTACATTTGGAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIGPSLV*YIWSIS
Trigger: GGAAATGCTCCAAATGTATCAAACAAGACTAGGGCC...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACAGCATGAAAGTGTGTGGCTaGATCCACCATGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLHILLKSDGAQLLLIHSMKVCG*IHHAFF
Trigger: AAAGAACGCATGGTGGATTCAGCCACACACTTTCAT...GCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp CAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGATGAAAGTGTGTGGCTaGATCCACCATGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: QEIPQLDLHQLRRSFLHLMKVCG*IHHAFF
Trigger: AAAGAACGCATGGTGGATTCAGCCACACACTTTCAT...CAAGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp TTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGCTGAGGCAGTTACCATaGAAGTGTGTGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: LESCASLPPLNTLSSVSMLRQLP*KCVAES
Trigger: GGATTCAGCCACACACTTTCATGGTAACTGCCTCAG...CATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp CAGTTGCCGAACAATTGCAGGATATCCCTTGAGAAAGTTCTGGAGGGCTGCCTGTTGGTCCATTTCATCTaGCTAAAGCCATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QLPNNCRISLEKVLEGCLLVHFI*LKPCSA
Trigger: AGCAGAACATGGCTTTAGTCAGATGAAATGGACCAA...CAGGCAGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCTTGTGTCACCAGTTaGAGACGGTGTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISCVTS*RRCSCI
Trigger: AATGCAAGAACACCGTCTTCAACTGGTGACACAAGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTTTCTGCTTTTCGGTaGCTCTATTCACACCATCCG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFSAFR*LYSHHP
Trigger: CGGATGGTGTGAATAGAGTCACCGAAAAGCAGAAAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTGGCACTTGAAACCCTaGTGTCCAAAAATTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVWHLKP*CPKILK
Trigger: TTTCAGAATTTTTGGACAGCAGGGTTTCAAGTGCCA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCGAACATGCATGAGCTaGACGGCAATCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIRTCMS*TAILRS
Trigger: GGAGCGCAGGATTGCCGTGCAGCTCATGCATGTTCG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAATCTTGGCTTGTTTTaGCAAAGCCGCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGINLGLF*QSRFSI
Trigger: GATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGCTAAAGAAGCCTGCTaGCAGGTGTCCATGACCAAC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNAKEAC*QVSMTN
Trigger: GTTGGTCATGGACACCTGGCAGCAGGCTTCTTTAGC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGCTATTTCTTCAAATTaGAAGGCAGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVAISSN*KAARCS
Trigger: AGAACACCTTGCTGCCTTGCAATTTGAAGAAATAGC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp GGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCAGGTTGGGTAAGGTaGATCCAATTACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGKQSKAASVCSQAGVDPSGWVR*IQLLGK
Trigger: CTTTCCTAGTAATTGGATGCACCTTACCCAACCTGA...AGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTCTATAAGATGCTCCTaGCTATTAAATGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVSIRCS*LLNGRG
Trigger: ACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTGGTAGAGATGGGTTTTaGCCTGTTGGCCAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIGRDGF*PVGQRG
Trigger: ACCCCGCTGGCCAACAGGGCAAAACCCATCTCTACC...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCCTCTGCCTGCTGAGTaGAGTTGCCGAACAATTGCA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNPLPAE*SCRTIA
Trigger: TGCAATTGTTCGGCAACTGCACTCAGCAGGCAGAGG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGGAATGGAAGCTTTGACTTGTTGGCTGAATCCACCATaGGTTCTTTTGGCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: PASVEEVFSALGMEALTCWLNPP*VLLALV
Trigger: GACTAGGGCCAAAAGAACGCATGGTGGATTCAGCCA...ACAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACCTCCTCAACTGATGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCCTGACTTCACTCCATaGTTACGACACAAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNPDFTP*LRHKAQ
Trigger: CTGCGCCTTGTGTCGTAAGCATGGAGTGAAGTCAGG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGACAGGATCTCCGACATaGTTCAGCCGGTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGTGSPT*FSRCLR
Trigger: TCTGAGGCACCGGCTGAACCATGTCGGAGATCCTGT...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTTGTCAGACGTTGCATaGTTTGCATCTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSLSDVA*FASPLQ
Trigger: CTGGAGTGGAGATGCAAACCATGCAACGTCTGACAA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTATTTAACAAATCGGTaGTTGTCTGGCCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVYLTNR*LSGLLY
Trigger: ATACAGCAGGCCAGACAACCACCGATTTGTTAAATA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGACATGTTGTGGATCCTaGCTTTCTTTAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVTCCGS*LSLISS
Trigger: AGAGGAGATTAAAGAAAGCCAGGATCCACAACATGT...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAGTCTCTTTGTATCTTaGAAACGGTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISLFVS*KRFSSA
Trigger: GGCAGAGCTGAACCGTTTCCAAGATACAAAGAGACT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCTTGTTGTCCTCTACTaGGATTTTACTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTLVVLY*DFTFHS
Trigger: GGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CTTTGTGGGCCACAATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTTGCCTCCTCCAAGGGAATaGGCCAAGGCATTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LCGPQFKTSNHGSPHHILPPPRE*AKALRL
Trigger: TAACCTCAATGCCTTGGCCCATTCCCTTGGAGGAGG...CAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATTGTGGCCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGGTAGTCAAGCTGGGGTaGATCCTTCTCATAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEVVKLG*ILLIVS
Trigger: GCTGACTATGAGAAGGATCCACCCCAGCTTGACTAC...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGAACAGCGACTTCAATTaGCTCCAGGTTCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISENSDFN*LQVLGT
Trigger: GGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGGAATGGAAGCTTTGACTTGTAACAGCGACTTCAATTaGCTCCAGGTTCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: PASVEEVFSALGMEALTCNSDFN*LQVLGT
Trigger: GGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTT...ACAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACCTCCTCAACTGATGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp TCTACTCTCCCGAGGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTGGTGTCATTAGTTTGGTGGTaGCTCTGTTCACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: STLPRVTLLMVLIISLVVSLVWW*LCSLES
Trigger: GCTCTCCAGTGAACAGAGCCACCACCAAACTAATGA...CACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGAGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp GCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCTCATCATTAGTTTGGTaGTGGCTCTGTTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ASKVKQHLCVVKLGWILLSSLVW*WLCSLE
Trigger: CTCCAGTGAACAGAGCCACCACCAAACTAATGATGA...GAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCATCATTAGTTTGGTaGTGGCTCTGTTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISSLVW*WLCSLE
Trigger: CTCCAGTGAACAGAGCCACCACCAAACTAATGATGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATGGGTTTCTTTTGACTaGTGTCACTTTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIWVSFD*CHFCLC
Trigger: GCAGAGGCAAAAGTGACACCAGTCAAAAGAAACCCA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp TTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGCCCTCACCACATTTTaGCTGGCATCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: LESCASLPPLNTLSSVSMALTTF*LASLKQ
Trigger: CTGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGC...CATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTAGCTCAGCCCAGCCCTaGCAGGACTTTGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCSSAQP*QDFVAH
Trigger: GTGGGCTACAAAGTCCTGCCAGGGCTGGGCTGAGCT...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR TCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCCATGGGCCACATTCTaGTCAAACTGCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERPWATF*SNCTPR
Trigger: TCTGGGTGTGCAGTTTGATCAGAATGTGGCCCATGG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCAGATTGAAATCAGTTTaGCGTGGTATCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTRLKSV*RGIMCL
Trigger: TAGACACATGATACCACGTCAAACTGATTTCAATCT...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTACATGCCGAACATGCATaGGCTGCACGGCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLHAEHA*AARQSC
Trigger: GCAGGATTGCCGTGCAGCTCATGCATGTTCGGCATG...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCATGCCGAACATGCATaGGCTGCACGGCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVHAEHA*AARQSC
Trigger: GCAGGATTGCCGTGCAGCTCATGCATGTTCGGCATG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTTTTCAGCTAGCCTGTaGAGAATATGGCCCAGTATG +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSFSASL*RIWPSM
Trigger: CATACTGGGCCATATTCTTCACAGGCTAGCTGAAAA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCAACTATCACTTGATTTaGCTTCTTCAGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTNYHLI*LLQLLV
Trigger: CACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTT...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTCTAGGATACAGTCTTaGTTCACAGGTATCTCATTA +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVSRIQS*FTGISL
Trigger: TAATGAGATACCTGTGAATCAAGACTGTATCCTAGA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCCAGCTACACGTTGACTaGTATCTTCGTGAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSQLHVD*YLREQF
Trigger: AAACTGCTCACGAAGATATCAGTCAACGTGTAGCTG...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTCCCTTTTCCTTCCTaGAGAGATTCTTGCTTACCA +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFPFPS*RDSCLP
Trigger: TGGTAAGCAAGAATCTCTTCAGGAAGGAAAAGGGAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTCAGCAGCCACCATGTaGGATACTGCTAAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNSAATM*DTAKEA
Trigger: GGCTTCTTTAGCAGTATCTCACATGGTGGCTGCTGA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SLSLGGWQIYWSPVLHFPAISKN*SRRLSS
Trigger: GCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGC...GGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp AAGAAGTGGGCAAATTTAACAATGTCAGCTTGGAGAAGGGACTCCAGAAGTTCTACAGCCTTGAACTTCTaGAGGGTCTCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KKWANLTMSAWRRDSRSSTALNF*RVSRSS
Trigger: GGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGT...AGAACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAATTTGCCCACTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp ATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACAGCCTTGAACCCTTATCCACAGCCTTaGACTTCTGAAGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: IYCSKVMVPNCSLSTALNPYPQP*TSEGSQ
Trigger: TTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGG...GTTCAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGTATACTGCTCAAAAGTaGTGGTGCCCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVYTAQK*WCPTAP
Trigger: AGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATA...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATATATACTGCTCAAAAGTaGTGGTGCCCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SKVKQHLCVVKLGWILLIYTAQK*WCPTAP
Trigger: AGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATA...TATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGACTTGTTGGAAGACATaGGTTCCAACAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISETCWKT*VPTATL
Trigger: CAGTGTGGCTGTTGGAACTCATGTCTTCCAACAAGT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp ATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACAGCCTTGAACACTTGTTGGAAGACATaGGTTCCAACAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: IYCSKVMVPNCSLSTALNTCWKT*VPTATL
Trigger: CAGTGTGGCTGTTGGAACTCATGTCTTCCAACAAGT...GTTCAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAATGGACCTGCATCAGTTaGGGAGGTCTTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKWTCIS*GGLFCT
Trigger: AGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCA...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCAAGACTGAGCTGGTCTaGTCAGAAACACTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSKTELV*SETLES
Trigger: AGACTCTAGTGTTTCTGATCAGACCAGCTCAGTCTT...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGAAGGTGAAGGCCTTTaGAAGCAGTTCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNEGEGL*KQFSEH
Trigger: GTGCTCTGAGAACTGCTTTCAAAGGCCTTCACCTTC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TTCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCATCACAGGTCGAAGGTaGAGGCCTTTGAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: FSIFRWLANLLESCASLPITGRR*RPLKAV
Trigger: AACTGCTTTCAAAGGCCTTCACCTTCGACCTGTGAT...GGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp GTTTCTCACAGCAGAAATGTTTTCTTTCCCTCTGAGGCAGTTACCATGAAAGTGGCTGCCTGTAATCCATaGAGCCACTTCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSHSRNVFFPSEAVTMKVAACNP*SHFLSP
Trigger: AGGAGACAGGAAGTGGCTTCATGGATTACAGGCAGC...CACTTTCATGGTAACTGCCTCAGAGGGAAAGAAAACATTTCTGCTGTGAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp AATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTTGGCTGGCATCTCTGCTGAGGCAGTTACCATaGAAGTGTGTGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: NLKLPITVALTTFWLASLLRQLP*KCVAES
Trigger: GGATTCAGCCACACACTTTCATGGTAACTGCCTCAG...CAGAGATGCCAGCCAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCTGAGGCAGTTACCATaGAAGTGTGTGGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNLRQLP*KCVAES
Trigger: GGATTCAGCCACACACTTTCATGGTAACTGCCTCAG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCTTGGTCCATTTCATCTaGCTAAAGCCATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASKVKQHLCVVKLGWILLLVHFI*LKPCSA
Trigger: AGCAGAACATGGCTTTAGTCAGATGAAATGGACCAA...GAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGAGACGTTGCATGGTTTaGATCTCCACTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVRRCMV*ISTPVS
Trigger: ACTGACTGGAGTGGAGATGCAAACCATGCAACGTCT...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTACGAACATGCATGAGCTaGACGGCAATCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVRTCMS*TAILRS
Trigger: GGAGCGCAGGATTGCCGTGCAGCTCATGCATGTTCG...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTTTCATGCCGAACATaGATGAGCTGCACGGCAATC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEFSCRT*MSCTAI
Trigger: GATTGCCGTGCAGCTCATGCATGTTCGGCATGAAAA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAAAACTTCCTTTTCATaGCGAACATGCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIKTSFS*RTCMSC
Trigger: GCAGCTCATGCATGTTCGGCATGAAAAGGAAGTTTT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTTCATTGTCATGAAATaGTTGGATAGCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVFIVMK*LDSFLD
Trigger: GTCCAAGAAGCTATCCAAGCATTTCATGACAATGAA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGAAACGGTTCAGCTCTaGCTGCATCAGGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVETVQL*LHQGKE
Trigger: TTCTTTTCCCTGATGCAGGCAGAGCTGAACCGTTTC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp AAGAAGTGGGCAAATTTAACAATGTCAGCTTGGAGAAGGGACTCCAGAAGTTCTGTGATGGTGCCCAACTaGTCCTTATCCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KKWANLTMSAWRRDSRSSVMVPN*SLSTAL
Trigger: CAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCAC...AGAACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAATTTGCCCACTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGTCTCTAATTTCAACATaGTCCATTCAGTATCCACTT +
Preference number: 4 (lower is better)
Translates to: LELLKGLKELLLQGNGPRSLIST*SIQYPL
Trigger: AAGTGGATACTGAATGGAGCATGTTGAAATTAGAGA...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTACAGGATCTCCGACATaGTTCAGCCGGTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAITGSPT*FSRCLR
Trigger: TCTGAGGCACCGGCTGAACCATGTCGGAGATCCTGT...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGTCCTTGTTGAGCCACTaGCACAGGATCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGSLLSH*HRISDM
Trigger: CATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGA...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCTCCATCCTTATCTTaGTTTTCAGCAGCTACACGT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISPSLS*FSAATR
Trigger: ACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTAGGAGGTGTAGGAAGTaGAAGCTCAGCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIRRCRK*KLSQGS
Trigger: GCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCT...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGTTCCTTCTCTTTTTCTaGTTCAGGAGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVFLLFF*FRRRSR
Trigger: CCTGCTCCTCCTCCTGAACCAGAAAAAGAGAAGGAA...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCGCTTTAGAAACTCCTaGAAACTTGTTCTAATCTCA +
Preference number: 4 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTRFRNS*KLVLIS
Trigger: TGAGATTAGAACAAGTTTCCAGGAGTTTCTAAAGCG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCCTGTAATTCAGGTTaGGTAAGGTGCATCCAATTA +
Preference number: 4 (lower is better)
Translates to: GGKQSKAASVCSQAGVDPSCNSG*VRCIQL
Trigger: TAATTGGATGCACCTTACCCAACCTGAATTACAGGA...AGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp GCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCGGTCTTTTCTGCACTTaGAATGGAAGCTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: ASKVKQHLCVVKLGWILLGLFCT*NGSFDL
Trigger: CAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACC...GAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGGGCTGGCAAATCTATTaGAGTCCTGTGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQGWQIY*SPVLHF
Trigger: GAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCC...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TTCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCGGCTGGCAAATCTATTaGAGTCCTGTGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: FSIFRWLANLLESCASLPGWQIY*SPVLHF
Trigger: GAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCC...GGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGTTGGCTCCAGGTTCTTaGCACCTAGGTCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQLAPGS*HLGLEM
Trigger: CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAA...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CTTTGTGGGCCACAATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTTGAACAGCGACTTCAATTaGCTCCAGGTTCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LCGPQFKTSNHGSPHHILNSDFN*LQVLGT
Trigger: GGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTT...CAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATTGTGGCCCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCATGTCTCCTCCTACATaGCAAAGAAGTTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSMSPPT*QRSWAL
Trigger: CAAAGCCCAACTTCTTTGCCATGTAGGAGGAGACAT...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCCCTTGAGAAAGTTCTaGAGGGCTGCCTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNPLRKF*RAACNP
Trigger: TGGATTACAGGCAGCCCTCCAGAACTTTCTCAAGGG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGTTAACAATGTCAGCTTaGAGAAGGGACTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QEIPQLDLHQLRRSFLHLLTMSA*RRDSRS
Trigger: ACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAA...CAAGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp ATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGCATTGACTCTAAAGTaGCAAATATGTCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: MGQGIEVTNRNFRQSTNSALTLK*QICQQL
Trigger: CAATTGCTGACATATTTGCCACTTTAGAGTCAATGC...CGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp GGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTGGTGGCTCTGTTCACTGTACCATGAAAGTGTGTaGCTGAATCCACCATGCGTT +
Preference number: 4 (lower is better)
Translates to: GLLCSWSSSLVWWWLCSLYHESV*LNPPCV
Trigger: AACGCATGGTGGATTCAGCCACACACTTTCATGGTA...CAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGCCCTCACCACATTTTaGCTGGCATCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNALTTF*LASLKQ
Trigger: CTGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTCCTTCAACTCCTTGTTaGGCCACTGGCACAGGATCT +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCPSTPC*ATGTGS
Trigger: AGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGG...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTCCTTCAACTCCTTGTTaGGCCACTGGCACAGGATCT +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTPSTPC*ATGTGS
Trigger: AGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGG...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGGATTTTGCACCAAGCTaGGCACGTGTAGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQDFAPS*ARVVSF
Trigger: AAAACTCACTACACGTGCTCAGCTTGGTGCAAAATC...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCTTCAGCAACTGTTCTaGTTTTGCACCAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNLQQLF*FCTKLS
Trigger: GCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCAGCTACACGTTGACTaGTATCTTCGTGAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEQLHVD*YLREQF
Trigger: AAACTGCTCACGAAGATATCAGTCAACGTGTAGCTG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGCTGCCAGGTGTCCATaGCCAACTTTTCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVAARCP*PTFHRP
Trigger: AGGCCGATGAAAAGTTGGTCATGGACACCTGGCAGC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GGCAGTTACCATGAAAGTGTGTGGCTGAATCCACCATGCGTTCTTTTGGCCCTACCACGAACTCGGAGTTaGCTGTTAATAAAGATGTTA +
Preference number: 4 (lower is better)
Translates to: GSYHESVWLNPPCVLLALPRTRS*LLIKML
Trigger: TAACATCTTTATTAACAGTCAACTCCGAGTTCGTGG...TAGGGCCAAAAGAACGCATGGTGGATTCAGCCACACACTTTCATGGTAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp GCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTACTTGTTGGAAGACATaGGTTCCAACAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: ANLLESCASLPPLNTLSSTCWKT*VPTATL
Trigger: CAGTGTGGCTGTTGGAACTCATGTCTTCCAACAAGT...ACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAGGGGTCTCGAACTCCTaGTTTCTGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRGVSNS*FLVICP
Trigger: TGGGCAGATCACCAGAAATCAGGAGTTCGAGACCCC...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCCAGAAACTTAAAGACTaGGCTGGTCTGATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSQKLKD*AGLIRN
Trigger: GTTTCTGATCAGACCAGCTCAGTCTTTAAGTTTCTG...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTGTACCCCAACAATTTaGCAGTGCACCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNCTPTI*QCTFPA
Trigger: TGCAGGAAAGGTGCACTGTCAAATTGTTGGGGTACA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATATCACAGGTCGAAGGTaGAGGCCTTTGAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNITGRR*RPLKAV
Trigger: AACTGCTTTCAAAGGCCTTCACCTTCGACCTGTGAT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCTCTGAAACAGCCTTaGAGTCTCTTGATAAGATGT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISLKQP*SLLIRC
Trigger: ACATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTTGGCTGGCATCTCTaGAACAGCCTTGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNFGWHL*NSLEVS
Trigger: AGAGACTTCAAGGCTGTTTCAGAGATGCCAGCCAAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCCAAGGGCAACCCTTTaGTATGGAAGCGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIPRATL*YGSVSR
Trigger: CCTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATGGCACTTGAAACCCTaGTGTCCAAAAATTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIWHLKP*CPKILK
Trigger: TTTCAGAATTTTTGGACAGCAGGGTTTCAAGTGCCA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACCGCTCCTGCTGGGACTaGCGCATCAGCCGGTTAATC +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHRSCWD*RISRLI
Trigger: GATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCG...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTTTCATGCCGAACATaGATGAGCTGCACGGCAATC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNFSCRT*MSCTAI
Trigger: GATTGCCGTGCAGCTCATGCATGTTCGGCATGAAAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACAACATTCGATAGTCTaGCACTTTAGTGGACAAATC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIQHSIV*HFSGQI
Trigger: GATTTGTCCACTAAAGTGGCAGACTATCGAATGTTG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGAATATGGCCCAGTATaGAATTGTTGGAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVEYGPV*NCWRVV
Trigger: TACCACCCTCCAACAATTGCATACTGGGCCATATTC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGACCTTTTCTTTTGAGTaGGGTCTCACCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISETFSFE*GLTFLP
Trigger: GGGAAGAAAGGTGAGACCGCACTCAAAAGAAAAGGT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTGGTCTTCCCTCAGATaGCTGAGTACTGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEWSSLR*LSTVLM
Trigger: CATCAAAACAGTACTCAGGCATCTGAGGGAAGACCA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCGGTTCAGCTCTGCCTaGATCAGGGAAAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERRFSSA*IREKKW
Trigger: CCATTTCTTTTCCCTGATGCAGGCAGAGCTGAACCG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGAAACGGTTCAGCTCTaGCTGCATCAGGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNETVQL*LHQGKE
Trigger: TTCTTTTCCCTGATGCAGGCAGAGCTGAACCGTTTC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAGCTATTTCTTCAAATTaGAAGGCAGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIAISSN*KAARCS
Trigger: AGAACACCTTGCTGCCTTGCAATTTGAAGAAATAGC...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGGTGATGGTGCCCAACTaGTCCTTATCCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLVMVPN*SLSTAL
Trigger: CAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCAC...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp GGCAAATTTAACAATGTCAGCTTGGAGAAGGGACTCCAGAAGTTCTTTGGGTTTCCAGCCTGCATATACTaGTCAAAAGTGATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GKFNNVSLEKGLQKFFGFPACIY*SKVMVP
Trigger: GGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG...AAACCCAAAGAACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAATTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp TCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTCCCGAGGGTTACTTTaGTCATGGTCCTCATCATTA +
Preference number: 4 (lower is better)
Translates to: SCASLPPLNTLSSVSMDISRGLL*SWSSSL
Trigger: TAATGATGAGGACCATGAGCAAAGTAACCCTCGGGA...GATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR GCA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTCTTTATTTCCTATTATaGCTTCTAGAACAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPREWAKALRLLTGTSASLYFLL*LLEQGE
Trigger: CTCTCCTTGTTCTAGAAGGCATAATAGGAAATAAAG...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637061.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTGGCAACCCTTTGCTATaGAAGCGTATCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCGNPLL*KRIQAG
Trigger: TCCAGCCTGGATACGCTTCCATAGCAAAGGGTTGCC...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTGTCAGACGTTGCATaGTTTGCATCTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNLSDVA*FASPLQ
Trigger: CTGGAGTGGAGATGCAAACCATGCAACGTCTGACAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCAAATCGGTGGTTGTCTaGCCTGCTGTATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSKSVVV*PAVSKE
Trigger: TTCTTTAGATACAGCAGGCCAGACAACCACCGATTT...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGTCCTCTTGTGCTTCGTaGGCTATTAACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQSSCAS*AINWSI
Trigger: AATGGACCAGTTAATAGCCCACGAAGCACAAGAGGA...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAACATGTTGTGGATCCTaGCTTTCTTTAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGITCCGS*LSLISS
Trigger: AGAGGAGATTAAAGAAAGCCAGGATCCACAACATGT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCAGGAGGTGTAGGAAGTaGAAGCTCAGCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVRRCRK*KLSQGS
Trigger: GCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTCCTTCTCTTTTTCTaGTTCAGGAGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNFLLFF*FRRRSR
Trigger: CCTGCTCCTCCTCCTGAACCAGAAAAAGAGAAGGAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGAGTCTCTTTGTATCTTaGAAACGGTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVSLFVS*KRFSSA
Trigger: GGCAGAGCTGAACCGTTTCCAAGATACAAAGAGACT...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCTTTACTATCCAGTTaGACCAAAGGGATTCGAGTA +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISLLSS*TKGIRV
Trigger: TACTCGAATCCCTTTGGTCCAACTGGATAGTAAAGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGGAGGAGATTTTTCTTTaGGGTCTGCTGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQEEIFL*GLLAGF
Trigger: AAAACCAGCCAGCAGACCCCAAAGAAAAATCTCCTC...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp GCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATAGTCAGCAAATAGGTCTTTTCTGCACTTaGAATGGAAGCTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: AASVCSQAGVDPSHSQQIGLFCT*NGSFDL
Trigger: CAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACC...TATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp GCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGGCTGGCAAATCTATTaGAGTCCTGTGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: ANLLESCASLPPLNTLSSGWQIY*SPVLHF
Trigger: GAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCC...ACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp GCAATAGCATGGCATGATCTGAATAAGTTCTCTACTCTCCCGAGGGTTACTTTGTTGGCTCCAGGTTCTTaGCACCTAGGTCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: AIAWHDLNKFSTLPRVTLLAPGS*HLGLEM
Trigger: CATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAA...CAAAGTAACCCTCGGGAGAGTAGAGAACTTATTCAGATCATGCCATGCTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp ACACAGGACAGAATGCTAAGGACATTCATGACATCCAACAAGAAGTGGGCAAATAACAGCGACTTCAATTaGCTCCAGGTTCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: TQDRMLRTFMTSNKKWANNSDFN*LQVLGT
Trigger: GGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTT...ATTTGCCCACTTCTTGTTGGATGTCATGAATGTCCTTAGCATTCTGTCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAGTCTTGGCAATAGCATaGCATGATCTGAATAAGTTC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIVLAIA*HDLNKF
Trigger: GAACTTATTCAGATCATGCCATGCTATTGCCAAGAC...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp GGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTACTCCAGAAGTTCTTTaGGTTTCTTTTGACTGGTGT +
Preference number: 4 (lower is better)
Translates to: GKQSKAASVCSQAGVDPSTPEVL*VSFDWC
Trigger: ACACCAGTCAAAAGAAACCCAAAGAACTTCTGGAGT...AGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAACTCCAGAAGTTCTTTaGGTTTCTTTTGACTGGTGT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGITPEVL*VSFDWC
Trigger: ACACCAGTCAAAAGAAACCCAAAGAACTTCTGGAGT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR CAA 72 bp TCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTaGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATC +
Preference number: 4 (lower is better)
Translates to: SGWVRCIQLLGK*FVPRFRVTKSI
Trigger: GATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR CAA 72 bp GATCTGAATAAGTTCTCTACTCTCCCGAGGGTTACTTaGCTCATGGTCCTCATCATTAGTTTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: DLNKFSTLPRVT*LMVLIISLVVA
Trigger: AGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGAGAGTAGAGAACTTATTCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTACCATGGGCCACATTCTaGTCAAACTGCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLPWATF*SNCTPR
Trigger: TCTGGGTGTGCAGTTTGATCAGAATGTGGCCCATGG...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGACCATGGGCCACATTCTaGTCAAACTGCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRPWATF*SNCTPR
Trigger: TCTGGGTGTGCAGTTTGATCAGAATGTGGCCCATGG...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAGATTGAAATCAGTTTaGCGTGGTATCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIRLKSV*RGIMCL
Trigger: TAGACACATGATACCACGTCAAACTGATTTCAATCT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTTCAAAGTACGATTTaGTGCAGGTTTAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFQSTI*CRFRNL
Trigger: CAGATTCCTAAACCTGCATCAAATCGTACTTTGAAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAACTATCACTTGATTTaGCTTCTTCAGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGINYHLI*LLQLLV
Trigger: CACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGATTTTGCACCAAGCTaGGCACGTGTAGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNDFAPS*ARVVSF
Trigger: AAAACTCACTACACGTGCTCAGCTTGGTGCAAAATC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCAGCTACACGTTGACTaGTATCTTCGTGAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNQLHVD*YLREQF
Trigger: AAACTGCTCACGAAGATATCAGTCAACGTGTAGCTG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGAAATCAGCCTGCCATTaGGCTACAAAATCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEKSACH*ATKSCL
Trigger: CAAGCAAGATTTTGTAGCTCAATGGCAGGCTGATTT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNAISKN*SRRLSS
Trigger: GCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GGCAAATTTAACAATGTCAGCTTGGAGAAGGGACTCCAGAAGTTCTTTGGGTTTCCTTATCCACAGCCTTaGACTTCTGAAGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GKFNNVSLEKGLQKFFGFPYPQP*TSEGSQ
Trigger: TTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGG...AAACCCAAAGAACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAATTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp GCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCACCTTATCCACAGCCTTaGACTTCTGAAGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ASLPPLNTLSSVSMDIFSPYPQP*TSEGSQ
Trigger: TTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGG...TGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp AAGAAGTGGGCAAATTTAACAATGTCAGCTTGGAGAAGGGACTCCAGAAGTTCTTATACTGCTCAAAAGTaGTGGTGCCCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KKWANLTMSAWRRDSRSSYTAQK*WCPTAP
Trigger: AGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATA...AGAACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAATTTGCCCACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp TCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTGGAATGGAAGCTTTaGCTTGTTGGAAGACATGAG +
Preference number: 4 (lower is better)
Translates to: SCASLPPLNTLSSVSMDILEWKL*LVGRHE
Trigger: CTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAA...GATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp CAATTACTAGGAAAGTTGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGATGTACCCCAACAATTTaGCAGTGCACCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLLGKLFVPRFRVTKSIRCTPTI*QCTFPA
Trigger: TGCAGGAAAGGTGCACTGTCAAATTGTTGGGGTACA...TCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACTCGACAGTCTAAGTTaGAGATTTATCTCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILDSLS*RFISRV
Trigger: AACTCTAGAGATAAATCTTCAACTTAGACTGTCGAG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGCTGCCTGTAATCCATaGAGCCACTTCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVAACNP*SHFLSP
Trigger: AGGAGACAGGAAGTGGCTTCATGGATTACAGGCAGC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATATGAAAGTGTGTGGCTaGATCCACCATGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNMKVCG*IHHAFF
Trigger: AAAGAACGCATGGTGGATTCAGCCACACACTTTCAT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATTTTGGCTGGCATCTCTaGAACAGCCTTGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RNFRQSTNSELTVNKDVNFGWHL*NSLEVS
Trigger: AGAGACTTCAAGGCTGTTTCAGAGATGCCAGCCAAA...ATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTACCAAGGGCAACCCTTTaGTATGGAAGCGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVPRATL*YGSVSR
Trigger: CCTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGG...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCCAAGGGCAACCCTTTaGTATGGAAGCGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVPRATL*YGSVSR
Trigger: CCTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTGGCACTTGAAACCCTaGTGTCCAAAAATTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSWHLKP*CPKILK
Trigger: TTTCAGAATTTTTGGACAGCAGGGTTTCAAGTGCCA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGAGACGTTGCATGGTTTaGATCTCCACTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGRRCMV*ISTPVS
Trigger: ACTGACTGGAGTGGAGATGCAAACCATGCAACGTCT...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGTTTTCATGCCGAACATaGATGAGCTGCACGGCAATC +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGFSCRT*MSCTAI
Trigger: GATTGCCGTGCAGCTCATGCATGTTCGGCATGAAAA...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTCATTGTCATGAAATaGTTGGATAGCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFIVMK*LDSFLD
Trigger: GTCCAAGAAGCTATCCAAGCATTTCATGACAATGAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGCAGCACATCAGGAATaGTCTTTCCTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNAAHQE*SFLSSA
Trigger: TGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGGCTCTGAAAACCATTaGTCCAATAAAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNGSENH*SNKGQL
Trigger: CAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATACCTTTTCTTTTGAGTaGGGTCTCACCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNTFSFE*GLTFLP
Trigger: GGGAAGAAAGGTGAGACCGCACTCAAAAGAAAAGGT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTGGTCTTCCCTCAGATaGCTGAGTACTGTTTTGATG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNWSSLR*LSTVLM
Trigger: CATCAAAACAGTACTCAGGCATCTGAGGGAAGACCA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCACTGCTAAAGAAGCCTaGTGCCAGGTGTCCATGACC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVTAKEA*CQVSMT
Trigger: GGTCATGGACACCTGGCAGCAGGCTTCTTTAGCAGT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGTCAGGTTGGGTAAGGTaGATCCAATTACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQSGWVR*IQLLGK
Trigger: CTTTCCTAGTAATTGGATGCACCTTACCCAACCTGA...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTCTATAAGATGCTCCTaGCTATTAAATGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFESIRCS*LLNGRG
Trigger: ACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGGTTCTTCCTTTCTTCTaGTGGGTTTGTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQVLPFF*WVCPVS
Trigger: AGAAACTGGACAAACCCAGCAGAAGAAAGGAAGAAC...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTGTTCTCTCCCTCTATaGTATGGGTACCATCACTTC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNCSLPL*YGYHHF
Trigger: GAAGTGATGGTACCCATAGCATAGAGGGAGAGAACA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp TCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCCAGTTGCCGAACAATTaGAGGATATCCCTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: SCASLPPLNTLSSVSMDIQLPNN*RISLEK
Trigger: TTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTG...GATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp AGATGCTCCTGCCTATTAAATGGAAGGGGTTCAAGAGGATTTTCTGGAATTTTTCCTCTGCCTGCTGAGTaGAGTTGCCGAACAATTGCA +
Preference number: 4 (lower is better)
Translates to: RCSCLLNGRGSRGFSGIFPLPAE*SCRTIA
Trigger: TGCAATTGTTCGGCAACTGCACTCAGCAGGCAGAGG...AAAAATTCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGTCACTTTTGCCTCTaGCTGCTGAGTGCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVCHFCL*LLSAVA
Trigger: GGCAACTGCACTCAGCAGGCAGAGGCAAAAGTGACA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATATACTGGTTCATAATGTaGAGTCAGGATGGATACCTC +
Preference number: 4 (lower is better)
Translates to: SKVKQHLCVVKLGWILLIYWFIM*SQDGYL
Trigger: GAGGTATCCATCCTGACTGCACATTATGAACCAGTA...TATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp TGTAGACTCCTTCCACGGTGTCTGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTCTCTAATTTCAACATaGTCCATTCAGTATCCACTT +
Preference number: 4 (lower is better)
Translates to: CRLLPRCLGGKQSKAASVSLIST*SIQYPL
Trigger: AAGTGGATACTGAATGGAGCATGTTGAAATTAGAGA...CACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTCGAGCACTGCAGAACTaGATGTTGCACCCAACCCTA +
Preference number: 4 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCRALQN*MLHPTL
Trigger: TAGGGTTGGGTGCAACATGCAGTTCTGCAGTGCTCG...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR GCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTATAGACCCCGAGCACTaGAGAACTGCATGTTGCACC +
Preference number: 4 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCIDPEH*RTACCT
Trigger: GGTGCAACATGCAGTTCTGCAGTGCTCGGGGTCTAT...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGGCAACCCTTTGCTATaGAAGCGTATCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVGNPLL*KRIQAG
Trigger: TCCAGCCTGGATACGCTTCCATAGCAAAGGGTTGCC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCCTTGTTGAGCCACTaGCACAGGATCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSLLSH*HRISDM
Trigger: CATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGTTGTCAGACGTTGCATaGTTTGCATCTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGLSDVA*FASPLQ
Trigger: CTGGAGTGGAGATGCAAACCATGCAACGTCTGACAA...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGAAATCGGTGGTTGTCTaGCCTGCTGTATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVKSVVV*PAVSKE
Trigger: TTCTTTAGATACAGCAGGCCAGACAACCACCGATTT...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTATTTAACAAATCGGTaGTTGTCTGGCCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSYLTNR*LSGLLY
Trigger: ATACAGCAGGCCAGACAACCACCGATTTGTTAAATA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTCCTCTTGTGCTTCGTaGGCTATTAACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNSSCAS*AINWSI
Trigger: AATGGACCAGTTAATAGCCCACGAAGCACAAGAGGA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCGCTTGGATAGCTTCTTaGACAAGAGTGTCAATAGAA +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSAWIAS*TRVSIE
Trigger: TTCTATTGACACTCTTGTCCAAGAAGCTATCCAAGC...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCATCGGCCTCAAAGTTaGACTCAACGTTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERHRPQS*TQRFLG
Trigger: CCCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp AAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTATCCTGTAATTCAGGTTaGGTAAGGTGCATCCAATTA +
Preference number: 4 (lower is better)
Translates to: KDASREQRLQLAPGSWHLSCNSG*VRCIQL
Trigger: TAATTGGATGCACCTTACCCAACCTGAATTACAGGA...TAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGTCCTTCCACGGTGTCTaGGTGGCAAGCAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLSFHGV*VASKVK
Trigger: CTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGA...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGCTATCTTTAGGTGGCTaGCAAATCTATTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQLSLGG*QIYWSP
Trigger: AGGACTCCAATAGATTTGCCAGCCACCTAAAGATAG...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGCTATCTTTAGGTGGCTaGCAAATCTATTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LESCASLPPLNTLSSVSMLSLGG*QIYWSP
Trigger: AGGACTCCAATAGATTTGCCAGCCACCTAAAGATAG...CATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp CCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGGAATGGAAGCTTTGACTTGTGGGTTACTTTGCTCATaGTCCTCATCATTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PASVEEVFSALGMEALTCGLLCS*SSSLVW
Trigger: CCAAACTAATGATGAGGACCATGAGCAAAGTAACCC...ACAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACCTCCTCAACTGATGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp TGTAATTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTTGTTTGTGCCACCCTTGAGAAAGTTCTaGAGGGCTGCCTGTAATCCA +
Preference number: 4 (lower is better)
Translates to: CNSGWVRCIQLLGKLFVPPLRKF*RAACNP
Trigger: TGGATTACAGGCAGCCCTCCAGAACTTTCTCAAGGG...TGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp GCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATAGTCAGCAAATAAATGTGCAGTCAGGATaGATACCTCTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AASVCSQAGVDPSHSQQINVQSG*IPLFLQ
Trigger: TTGGAGAAAAAGAGGTATCCATCCTGACTGCACATT...TATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGAATGTGCAGTCAGGATaGATACCTCTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFENVQSG*IPLFLQ
Trigger: TTGGAGAAAAAGAGGTATCCATCCTGACTGCACATT...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR CAA 72 bp CATGGTTGTATTTCTCTTAATAGTAGGGCCACCTCGTaGTTCTCTCCCTCTATGCTATGGGTACCATCACTT +
Preference number: 4 (lower is better)
Translates to: HGCISLNSRATS*FSPSMLWVPSL
Trigger: AAGTGATGGTACCCATAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACTATTAAGAGAAATACAACCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAAAATGCCTTTGCAAATaGCTTGGGACTCACGGTCCG +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVKCLCK*LGTHGP
Trigger: CGGACCGTGAGTCCCAAGTCATTTGCAAAGGCATTT...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGTTTTCAGCTAGCCTGTaGAGAATATGGCCCAGTATG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERFSASL*RIWPSM
Trigger: CATACTGGGCCATATTCTTCACAGGCTAGCTGAAAA...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGTTCTTTCCACTTCTGTaGGGTTTCTATTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERFFPLL*GFYCSL
Trigger: CAGGCTGCAATAGAAACCTCACAGAAGTGGAAAGAA...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATACAAAATCTTGCTTGTaGTCCGGACGCTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNTKSCL*SGRFRN
Trigger: GTTTCTAAAGCGTCCGGATCACAAGCAAGATTTTGT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAAATCAGCCTGCCATTaGGCTACAAAATCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNKSACH*ATKSCL
Trigger: CAAGCAAGATTTTGTAGCTCAATGGCAGGCTGATTT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCATCAGGAAGGGAGTTaGAATCAGCCTGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVHQEGS*NQPAIE
Trigger: CTCAATGGCAGGCTGATTTCAACTCCCTTCCTGATG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAAGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LKVISLHHFLVHVHSFGEAISKN*SRRLSS
Trigger: GCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGC...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCCACGAACTCGGAGTTaGCTGTTAATAAAGATGTTA +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEPRTRS*LLIKML
Trigger: TAACATCTTTATTAACAGTCAACTCCGAGTTCGTGG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTAATTCTAGGCTCACCTaGCCCACTGTGAAAACTGTC +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAINSRLT*PTVKTV
Trigger: GACAGTTTTCACAGTGGGTCAGGTGAGCCTAGAATT...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp GGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTGGTGGCTCTGTTCACTGCTCGACAGTCTAAGTTaGAGATTTATCTCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: GLLCSWSSSLVWWWLCSLLDSLS*RFISRV
Trigger: AACTCTAGAGATAAATCTTCAACTTAGACTGTCGAG...CAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTGGTCCATTTCATCTaGCTAAAGCCATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNLVHFI*LKPCSA
Trigger: AGCAGAACATGGCTTTAGTCAGATGAAATGGACCAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCAAGTTTCTCAAAATaGAAATGGGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISSFSK*KWARSS
Trigger: AGAAGATCTTGCCCATTTGCATTTTGAGAAACTTGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTTTTCATGCCGAACATaGATGAGCTGCACGGCAATC +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTFSCRT*MSCTAI
Trigger: GATTGCCGTGCAGCTCATGCATGTTCGGCATGAAAA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGAATCTTGGCTTGTTTTaGCAAAGCCGCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGNLGLF*QSRFSI
Trigger: GATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATT...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGAATCTTGGCTTGTTTTaGCAAAGCCGCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERNLGLF*QSRFSI
Trigger: GATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCAACATTCGATAGTCTaGCACTTTAGTGGACAAATC +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEQHSIV*HFSGQI
Trigger: GATTTGTCCACTAAAGTGGCAGACTATCGAATGTTG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTCTTTAATCTCCTCTTaGAGAACTGGTAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISESLISS*RTGRAS
Trigger: AGATGCTCTACCAGTTCTGCAAGAGGAGATTAAAGA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGGGCTCTGAAAACCATTaGTCCAATAAAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERGSENH*SNKGQL
Trigger: CAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCC...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATCTATTGGAGTCCTGTaGTTCACTTCCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LKVISLHHFLVHVHSFGESIGVL*FTSPFE
Trigger: TTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGACTCGCCATAGTGGATaGACATTTAGCATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERTRHSG*TFSMCG
Trigger: ACCACACATGCTAAATGTGCATCCACTATGGCGAGT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAACACCTTTCCTGCATGTaGAAACTGCACATAGACAAG +
Preference number: 4 (lower is better)
Translates to: LKVISLHHFLVHVHSFGEHLSCM*KLHIDK
Trigger: CTTGTCTATGTGCAGTTTGCACATGCAGGAAAGGTG...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCAGTTGCCGAACAATTaGAGGATATCCCTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNQLPNN*RISLEK
Trigger: TTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGCTGAATCCACCATaGGTTCTTTTGGCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVWLNPP*VLLALV
Trigger: GACTAGGGCCAAAAGAACGCATGGTGGATTCAGCCA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTACTGGTTCATAATGTaGAGTCAGGATGGATACCTC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNYWFIM*SQDGYL
Trigger: GAGGTATCCATCCTGACTGCACATTATGAACCAGTA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCTCTAATTTCAACATaGTCCATTCAGTATCCACTT +
Preference number: 4 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISLIST*SIQYPL
Trigger: AAGTGGATACTGAATGGAGCATGTTGAAATTAGAGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCAAGTAGATAGCCACTaGAAAATGCCTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVQVDSH*KMPLQM
Trigger: CATTTGCAAAGGCATTTTCCAGTGGCTATCTACTTG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCAGAAGGTTAAGTGTTaGCTCCAAGCGAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVQKVKC*LQARKI
Trigger: AATTTTTCTCGCTTGGAGCCAACACTTAACCTTCTG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAAATCGGTGGTTGTCTaGCCTGCTGTATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNKSVVV*PAVSKE
Trigger: TTCTTTAGATACAGCAGGCCAGACAACCACCGATTT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCGATCAAGAGCATCCTaGAAATCTTTAAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISERSRAS*KSLSRL
Trigger: AAGACGACTTAAAGATTTCCAGGATGCTCTTGATCG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGGCTTGGATAGCTTCTTaGACAAGAGTGTCAATAGAA +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQAWIAS*TRVSIE
Trigger: TTCTATTGACACTCTTGTCCAAGAAGCTATCCAAGC...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCGACTTCTTCAGCTTTTaGTGTTTTATCAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSDFFSF*CFISIS
Trigger: GCTAATGCTGATAAAACACCAAAAGCTGAAGAAGTC...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTCCAGAAGCTGTGCTTaGTTTAAAGTCATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSSRSCA*FKVIGK
Trigger: TTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTGGTCTCTTAAATTTTaGTCTCCATCCTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSWSLKF*SPSLSW
Trigger: CCAAGATAAGGATGGAGACCAAAATTTAAGAGACCA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGTCTTTACTATCCAGTTaGACCAAAGGGATTCGAGTA +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQSLLSS*TKGIRV
Trigger: TACTCGAATCCCTTTGGTCCAACTGGATAGTAAAGA...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTCCTGTAATTCAGGTTaGGTAAGGTGCATCCAATTA +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISESCNSG*VRCIQL
Trigger: TAATTGGATGCACCTTACCCAACCTGAATTACAGGA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATTCCTGTAATTCACCTCCTCCAAGGGAATaGGCCAAGGCATTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: QSTNSELTVNKDVNSCNSPPPRE*AKALRL
Trigger: TAACCTCAATGCCTTGGCCCATTCCCTTGGAGGAGG...TGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CCA 90 bp TGTTCTGGAACACCGCTTTGTAAGATAGTTCAAGGTGATGTGCAAAGCAATATAGTAGTCAAGCTGGGGTaGATCCTTCTCATAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CSGTPLCKIVQGDVQSNIVVKLG*ILLIVS
Trigger: GCTGACTATGAGAAGGATCCACCCCAGCTTGACTAC...TATATTGCTTTGCACATCACCTTGAACTATCTTACAAAGCGGTGTTCCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp AACTTGCAGGAAGGGTCAACACTAGGTCGACTAGTGTCAGGATATTTGGATACTGGTCTTTTCTGCACTTaGAATGGAAGCTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: NLQEGSTLGRLVSGYLDTGLFCT*NGSFDL
Trigger: CAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACC...AGTATCCAAATATCCTGACACTAGTCGACCTAGTGTTGACCCTTCCTGCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGTTTGTCCAGTTTCTCTaGGGTTTGTCCTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQFVQFL*GLSLVS
Trigger: AGAAACTAAGGACAAACCCCAGAGAAACTGGACAAA...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTATAGATACTCTTGACTaGAGCAAGCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTIDTLD*SKLRRS
Trigger: GCTCCTCCTCAGCTTGCTCCAGTCAAGAGTATCTAT...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGGTGGCTCTGTTCACTaGAGAGCTACTTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVGGSVH*RATCCF
Trigger: GAAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCAGCCTGCATATACTGCTCAAAAGTGATGGTGCCCAACTGCTCCTTATCCACATTTAGTTCTGAATACTaGGCCAATATCAACACCTTT +
Preference number: 4 (lower is better)
Translates to: PACIYCSKVMVPNCSLSTFSSEY*ANINTF
Trigger: AAAGGTGTTGATATTGGCCCAGTATTCAGAACTAAA...TGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTCTCCCTCTATGCTATaGGTACCATCACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNSPSML*VPSLPK
Trigger: TTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATGGGTTTCTTTTGACTaGTGTCACTTTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LKVISLHHFLVHVHSFGEWVSFD*CHFCLC
Trigger: GCAGAGGCAAAAGTGACACCAGTCAAAAGAAACCCA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp AGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATTACCATGAAAGTGTGTaGCTGAATCCACCATGCGTT +
Preference number: 4 (lower is better)
Translates to: RNFRQSTNSELTVNKDVNYHESV*LNPPCV
Trigger: AACGCATGGTGGATTCAGCCACACACTTTCATGGTA...ATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp CTGGTTCATAATGTGCAGTCAGGATGGATACCTCTTTTTCTCCAAATTCTTGATGCCCTCACCACATTTTaGCTGGCATCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: LVHNVQSGWIPLFLQILDALTTF*LASLKQ
Trigger: CTGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGC...ATCAAGAATTTGGAGAAAAAGAGGTATCCATCCTGACTGCACATTATGAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
3UTR CAA 72 bp GCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTaGAACACTTTGAGTAGTGTTTCCATGGACATCTTT +
Preference number: 4 (lower is better)
Translates to: ANLLESCASLPP*NTLSSVSMDIF
Trigger: AAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
3UTR CAA 72 bp CACATCCAAATAAAATCTTTGAGGGGACGTCCGGTCTaGGCAATAGCATGGCATGATCTGAATAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HIQIKSLRGRPV*AIAWHDLNKFS
Trigger: AGAGAACTTATTCAGATCATGCCATGCTATTGCCAAGACCGGACGTCCCCTCAAAGATTTTATTTGGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
3UTR CAA 72 bp AGGATCATTTCTTTCTACTATCTGTACCCCAACAATTaGACAGTGCACCTTTCCTGCATGTGCAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: RIISFYYLYPNN*TVHLSCMCKLH
Trigger: GTGCAGTTTGCACATGCAGGAAAGGTGCACTGTCAAATTGTTGGGGTACAGATAGTAGAAAGAAATGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTTCAAAGTACGATTTaGTGCAGGTTTAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEFQSTI*CRFRNL
Trigger: CAGATTCCTAAACCTGCATCAAATCGTACTTTGAAA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTGATTTTGCACCAAGCTaGGCACGTGTAGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIDFAPS*ARVVSF
Trigger: AAAACTCACTACACGTGCTCAGCTTGGTGCAAAATC...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTTCTTTCCACTTCTGTaGGGTTTCTATTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIFFPLL*GFYCSL
Trigger: CAGGCTGCAATAGAAACCTCACAGAAGTGGAAAGAA...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTGCAGTAGGAGTTTTTaGAGCCACATGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAICSRSF*SHMALM
Trigger: CATCAAAGCCATGTGGCTTCAAAAACTCCTACTGCA...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGTTCCCTTTTCCTTCCTaGAGAGATTCTTGCTTACCA +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERFPFPS*RDSCLP
Trigger: TGGTAAGCAAGAATCTCTTCAGGAAGGAAAAGGGAA...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAGATCATTCACTCGTTaGTGTAGTTCAGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNRSFTR*CSSAFV
Trigger: AACAAAGGCTGAACTACATCAACGAGTGAATGATCT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLAISKN*SRRLSS
Trigger: GCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGC...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp GGCAAATTTAACAATGTCAGCTTGGAGAAGGGACTCCAGAAGTTCTTTGGGTTTTTGGAATGGAAGCTTTaGCTTGTTGGAAGACATGAG +
Preference number: 4 (lower is better)
Translates to: GKFNNVSLEKGLQKFFGFLEWKL*LVGRHE
Trigger: CTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAA...AAACCCAAAGAACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAATTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGATCACCTGACCCACTGTaGAAACTGTCTTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRSPDPL*KLSSSV
Trigger: AACTGAGGAAGACAGTTTTCACAGTGGGTCAGGTGA...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATGTGAAGGAGGTCTTTaGCATCATTGTACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LKVISLHHFLVHVHSFGECEGGL*HHCTEE
Trigger: TTCCTCTGTACAATGATGTCAAAGACCTCCTTCACA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR TCA 90 bp CTGGTTCATAATGTGCAGTCAGGATGGATACCTCTTTTTCTCCAAATTCTTGATATCACAGGTCGAAGGTaGAGGCCTTTGAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LVHNVQSGWIPLFLQILDITGRR*RPLKAV
Trigger: AACTGCTTTCAAAGGCCTTCACCTTCGACCTGTGAT...ATCAAGAATTTGGAGAAAAAGAGGTATCCATCCTGACTGCACATTATGAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp CTGGTTCATAATGTGCAGTCAGGATGGATACCTCTTTTTCTCCAAATTCTTGATTTCCTGTCTCCTATTTaGGAAGGCATCACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LVHNVQSGWIPLFLQILDFLSPI*EGITGR
Trigger: TCGACCTGTGATGCCTTCTCAAATAGGAGACAGGAA...ATCAAGAATTTGGAGAAAAAGAGGTATCCATCCTGACTGCACATTATGAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTTCCTGTCTCCTATTTaGGAAGGCATCACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVFLSPI*EGITGR
Trigger: TCGACCTGTGATGCCTTCTCAAATAGGAGACAGGAA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGGGCCCTAGTCTTGTTTaGTACATTTGGAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLGPSLV*YIWSIS
Trigger: GGAAATGCTCCAAATGTATCAAACAAGACTAGGGCC...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp TGTAATTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTTGTTTGTGCCAGGCCCTAGTCTTGTTTaGTACATTTGGAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: CNSGWVRCIQLLGKLFVPGPSLV*YIWSIS
Trigger: GGAAATGCTCCAAATGTATCAAACAAGACTAGGGCC...TGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAATTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAAGACGTTGCATGGTTTaGATCTCCACTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRRRCMV*ISTPVS
Trigger: ACTGACTGGAGTGGAGATGCAAACCATGCAACGTCT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAAATTTGTCAGACGTTaGATGGTTTGCATCTCCACT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNKFVRR*MVCIST
Trigger: AGTGGAGATGCAAACCATGCAACGTCTGACAAATTT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGAAAACTTCCTTTTCATaGCGAACATGCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERKTSFS*RTCMSC
Trigger: GCAGCTCATGCATGTTCGGCATGAAAAGGAAGTTTT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTGGCTCTGAAAACCATTaGTCCAATAAAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTGSENH*SNKGQL
Trigger: CAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCC...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp CTTTGTGGGCCACAATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTTGTCTATAAGATGCTCCTaGCTATTAAATGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LCGPQFKTSNHGSPHHILSIRCS*LLNGRG
Trigger: ACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA...CAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATTGTGGCCCACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp TGTAATTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTTGTTTGTGCCATCTATTGGAGTCCTGTaGTTCACTTCCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: CNSGWVRCIQLLGKLFVPSIGVL*FTSPFE
Trigger: TTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGA...TGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAATTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR GCA 90 bp CATCCAATTACTAGGAAAGTTGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATTACTGGTTCATAATGTaGAGTCAGGATGGATACCTC +
Preference number: 4 (lower is better)
Translates to: HPITRKVVCAKVQGHQIDYWFIM*SQDGYL
Trigger: GAGGTATCCATCCTGACTGCACATTATGAACCAGTA...ATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTCCTTGTTGAGCCACTaGCACAGGATCTCCGACATG +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHSLLSH*HRISDM
Trigger: CATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCAAGTAGATAGCCACTaGAAAATGCCTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNQVDSH*KMPLQM
Trigger: CATTTGCAAAGGCATTTTCCAGTGGCTATCTACTTG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCAGAAGGTTAAGTGTTaGCTCCAAGCGAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNQKVKC*LQARKI
Trigger: AATTTTTCTCGCTTGGAGCCAACACTTAACCTTCTG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTATTTAACAAATCGGTaGTTGTCTGGCCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNYLTNR*LSGLLY
Trigger: ATACAGCAGGCCAGACAACCACCGATTTGTTAAATA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTTCCTCTTGTGCTTCGTaGGCTATTAACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCSSCAS*AINWSI
Trigger: AATGGACCAGTTAATAGCCCACGAAGCACAAGAGGA...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTCCTCTTGTGCTTCGTaGGCTATTAACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTSSCAS*AINWSI
Trigger: AATGGACCAGTTAATAGCCCACGAAGCACAAGAGGA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCCAGTATGCAATTGTTaGAGGGTGGTAAATTGTCAA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNPVCNC*RVVNCQ
Trigger: TTGACAATTTACCACCCTCCAACAATTGCATACTGG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGCTTGGATAGCTTCTTaGACAAGAGTGTCAATAGAA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNAWIAS*TRVSIE
Trigger: TTCTATTGACACTCTTGTCCAAGAAGCTATCCAAGC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGACTTCTTCAGCTTTTaGTGTTTTATCAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVDFFSF*CFISIS
Trigger: GCTAATGCTGATAAAACACCAAAAGCTGAAGAAGTC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTCCAGAAGCTGTGCTTaGTTTAAAGTCATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISESRSCA*FKVIGK
Trigger: TTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGTCTCCATCCTTATCTTaGTTTTCAGCAGCTACACGT +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERSPSLS*FSAATR
Trigger: ACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGA...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGTGGTCTCTTAAATTTTaGTCTCCATCCTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: FSMCGPDLLGGYVISELQWSLKF*SPSLSW
Trigger: CCAAGATAAGGATGGAGACCAAAATTTAAGAGACCA...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCATATGTTTACTGAGATaGCAGGAGCTTGTTTCTATA +
Preference number: 4 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSICLLR*QELVSI
Trigger: TATAGAAACAAGCTCCTGCCATCTCAGTAAACATAT...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACATGAGCCACCATGCTTaGCCTGTCTTCCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHMSHHA*PVFPSS
Trigger: AGAACTGGGGAAGACAGGCCAAGCATGGTGGCTCAT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp ACACAGGACAGAATGCTAAGGACATTCATGACATCCAACAAGAAGTGGGCAAATTCTCCCTCTATGCTATaGGTACCATCACTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: TQDRMLRTFMTSNKKWANSPSML*VPSLPK
Trigger: TTTTGGAAGTGATGGTACCCATAGCATAGAGGGAGA...ATTTGCCCACTTCTTGTTGGATGTCATGAATGTCCTTAGCATTCTGTCCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGTGGGTTTCTTTTGACTaGTGTCACTTTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLWVSFD*CHFCLC
Trigger: GCAGAGGCAAAAGTGACACCAGTCAAAAGAAACCCA...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp AACTTGCAGGAAGGGTCAACACTAGGTCGACTAGTGTCAGGATATTTGGATACTACTCCAGAAGTTCTTTaGGTTTCTTTTGACTGGTGT +
Preference number: 4 (lower is better)
Translates to: NLQEGSTLGRLVSGYLDTTPEVL*VSFDWC
Trigger: ACACCAGTCAAAAGAAACCCAAAGAACTTCTGGAGT...AGTATCCAAATATCCTGACACTAGTCGACCTAGTGTTGACCCTTCCTGCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAATGTGCAGTCAGGATaGATACCTCTTTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNNVQSG*IPLFLQ
Trigger: TTGGAGAAAAAGAGGTATCCATCCTGACTGCACATT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGATTAAGTTTGGCACTTaGAACCCTGCTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGIKFGT*NPAVQK
Trigger: TTTTTGGACAGCAGGGTTTCAAGTGCCAAACTTAAT...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTATCATGTTGCACTTACTaGCCTTCCGGGACTCATTTT +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVSCCTY*PSGTHF
Trigger: AAAATGAGTCCCGGAAGGTCAGTAAGTGCAACATGA...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTCTAGGATACAGTCTTaGTTCACAGGTATCTCATTA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNSRIQS*FTGISL
Trigger: TAATGAGATACCTGTGAATCAAGACTGTATCCTAGA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTCAGCTACACGTTGACTaGTATCTTCGTGAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCQLHVD*YLREQF
Trigger: AAACTGCTCACGAAGATATCAGTCAACGTGTAGCTG...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGCAGTAGGAGTTTTTaGAGCCACATGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVCSRSF*SHMALM
Trigger: CATCAAAGCCATGTGGCTTCAAAAACTCCTACTGCA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGAGAACCTTTTCTTTTaGGTGCGGTCTCACCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVENLFF*VRSHLS
Trigger: AGAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp AGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATCCACGAACTCGGAGTTaGCTGTTAATAAAGATGTTA +
Preference number: 4 (lower is better)
Translates to: RNFRQSTNSELTVNKDVNPRTRS*LLIKML
Trigger: TAACATCTTTATTAACAGTCAACTCCGAGTTCGTGG...ATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp GCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATCTCTGAAACAGCCTTaGAGTCTCTTGATAAGATGT +
Preference number: 4 (lower is better)
Translates to: ASLPPLNTLSSVSMDIFSSLKQP*SLLIRC
Trigger: ACATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGA...TGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTTTCTCCAAATTCTTaGTTTATCTTTGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNFSPNS*FIFVGH
Trigger: GTGGCCCACAAAGATAAATCAAGAATTTGGAGAAAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGAAATTTGTCAGACGTTaGATGGTTTGCATCTCCACT +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGKFVRR*MVCIST
Trigger: AGTGGAGATGCAAACCATGCAACGTCTGACAAATTT...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGAAATTTGTCAGACGTTaGATGGTTTGCATCTCCACT +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERKFVRR*MVCIST
Trigger: AGTGGAGATGCAAACCATGCAACGTCTGACAAATTT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTCAAGTTTCTCAAAATaGAAATGGGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: CTFSMCGPDLLGGYVISESSFSK*KWARSS
Trigger: AGAAGATCTTGCCCATTTGCATTTTGAGAAACTTGA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTACGTCTTTTCTCCCTTTaGTCTCGTGCAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVRLFSL*SRAKAS
Trigger: AGATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACG...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCGTCTTTTCTCCCTTTaGTCTCGTGCAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVRLFSL*SRAKAS
Trigger: AGATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAAATCTTGGCTTGTTTTaGCAAAGCCGCTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRNLGLF*QSRFSI
Trigger: GATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGCAACATTCGATAGTCTaGCACTTTAGTGGACAAATC +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGQHSIV*HFSGQI
Trigger: GATTTGTCCACTAAAGTGGCAGACTATCGAATGTTG...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGAATATGGCCCAGTATaGAATTGTTGGAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVEYGPV*NCWRVV
Trigger: TACCACCCTCCAACAATTGCATACTGGGCCATATTC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTGGCTCTGAAAACCATTaGTCCAATAAAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCGSENH*SNKGQL
Trigger: CAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCC...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR GCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTTACCTGTTACTCTGTaGCTTTTCCTCTTCTCGTCT +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAILPVTL*LFLFSS
Trigger: AGACGAGAAGAGGAAAAGGCACAGAGTAACAGGTAA...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCCCGAGGGTTACTTTaGTCATGGTCCTCATCATTA +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSRGLL*SWSSSL
Trigger: TAATGATGAGGACCATGAGCAAAGTAACCCTCGGGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCACCTTTCCTGCATGTaGAAACTGCACATAGACAAG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVHLSCM*KLHIDK
Trigger: CTTGTCTATGTGCAGTTTGCACATGCAGGAAAGGTG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTCTCAGCCCAGGATCCTaGTGGTCTATAATATCATTC +
Preference number: 4 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCLSPGS*WSIISF
Trigger: GAATGATATTATAGACCAGCAGGATCCTGGGCTGAG...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTTCTGCGGCCTTTTCTaGTTTTCGGTGACTCTATTC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVFCGLF*FSVTLF
Trigger: GAATAGAGTCACCGAAAAGCAGAAAAGGCCGCAGAA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGCAAGTAGATAGCCACTaGAAAATGCCTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGQVDSH*KMPLQM
Trigger: CATTTGCAAAGGCATTTTCCAGTGGCTATCTACTTG...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTAAATCGGTGGTTGTCTaGCCTGCTGTATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCKSVVV*PAVSKE
Trigger: TTCTTTAGATACAGCAGGCCAGACAACCACCGATTT...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGCGATCAAGAGCATCCTaGAAATCTTTAAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGRSRAS*KSLSRL
Trigger: AAGACGACTTAAAGATTTCCAGGATGCTCTTGATCG...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCCAGTATGCAATTGTTaGAGGGTGGTAAATTGTCAA +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERPVCNC*RVVNCQ
Trigger: TTGACAATTTACCACCCTCCAACAATTGCATACTGG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGACTTCTTCAGCTTTTaGTGTTTTATCAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNDFFSF*CFISIS
Trigger: GCTAATGCTGATAAAACACCAAAAGCTGAAGAAGTC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTCTCCATCCTTATCTTaGTTTTCAGCAGCTACACGT +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTSPSLS*FSAATR
Trigger: ACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCGCTTTAGAAACTCCTaGAAACTTGTTCTAATCTCA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNRFRNS*KLVLIS
Trigger: TGAGATTAGAACAAGTTTCCAGGAGTTTCTAAAGCG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGAGAGGAATTCTAAGCTaGCTTTCAGAATTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVRGILS*LSELSL
Trigger: TAAAGACAATTCTGAAAGCCAGCTTAGAATTCCTCT...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCTGTTTCCAGAGAAATaGATATTCGAGGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERLFPEK*IFEELE
Trigger: CTCTAGTTCCTCGAATATCCATTTCTCTGGAAACAG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGAGGAGATTTTTCTTTaGGGTCTGCTGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVEEIFL*GLLAGF
Trigger: AAAACCAGCCAGCAGACCCCAAAGAAAAATCTCCTC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTACCATGAAAGTGTGTaGCTGAATCCACCATGCGTT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVYHESV*LNPPCV
Trigger: AACGCATGGTGGATTCAGCCACACACTTTCATGGTA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTATTAAGTTTGGCACTTaGAACCCTGCTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIIKFGT*NPAVQK
Trigger: TTTTTGGACAGCAGGGTTTCAAGTGCCAAACTTAAT...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTCCCACAAACCTTTGTTaGGTATGTACTATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCPTNLC*VCTISE
Trigger: TTCACTGATAGTACATACTCAACAAAGGTTTGTGGG...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACCTTCAGCAACTGTTCTaGTTTTGCACCAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHLQQLF*FCTKLS
Trigger: GCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAG...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTGTCAATCACCTGATTaGGGTTTTCCTTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTCQSPD*GFPFAV
Trigger: TACTGCAAAAGGAAAACCTCAATCAGGTGATTGACA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCACACAAATGGATACTaGCACTCTACCAATATCATG +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIHTNGY*HSTNIM
Trigger: CATGATATTGGTAGAGTGTCAGTATCCATTTGTGTG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGATATCTCAAATCTCCGTaGGGCAGAAAGACTATAGAG +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRYLKSP*GRKTIE
Trigger: CTCTATAGTCTTTCTGCCTCACGGAGATTTGAGATA...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGTGAAGGAGGTCTTTaGCATCATTGTACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVCEGGL*HHCTEE
Trigger: TTCCTCTGTACAATGATGTCAAAGACCTCCTTCACA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp TTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGAATGTCAGTAAATGCTTTATCTCTGAAACAGCCTTaGAGTCTCTTGATAAGATGT +
Preference number: 4 (lower is better)
Translates to: FVPRFRVTKSIRMSVNALSLKQP*SLLIRC
Trigger: ACATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGA...TAAAGCATTTACTGACATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR TCA 90 bp TTACTAGGAAAGTTGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGAATGTTTTCTCCAAATTCTTaGTTTATCTTTGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLGKLFVPRFRVTKSIRMFSPNS*FIFVGH
Trigger: GTGGCCCACAAAGATAAATCAAGAATTTGGAGAAAA...CATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTTGGCACTTGAAACCCTaGTGTCCAAAAATTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCWHLKP*CPKILK
Trigger: TTTCAGAATTTTTGGACAGCAGGGTTTCAAGTGCCA...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTAAATTTGTCAGACGTTaGATGGTTTGCATCTCCACT +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTKFVRR*MVCIST
Trigger: AGTGGAGATGCAAACCATGCAACGTCTGACAAATTT...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAAAAACTTCCTTTTCATaGCGAACATGCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVKTSFS*RTCMSC
Trigger: GCAGCTCATGCATGTTCGGCATGAAAAGGAAGTTTT...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGAGTTCCTTCCAATCATaGATCAACTTATACGGAATC +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYERSSFQS*INLYGI
Trigger: GATTCCGTATAAGTTGATGCATGATTGGAAGGAACT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR GCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTCTTTAATCTCCTCTTaGAGAACTGGTAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAISLISS*RTGRAS
Trigger: AGATGCTCTACCAGTTCTGCAAGAGGAGATTAAAGA...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTGTATCCTCTTGATCTaGCTGAAGTTACCTGTTACT +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTCILLI*LKLPVT
Trigger: AGTAACAGGTAACTTCAGGCAGATCAAGAGGATACA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAGAAAAACTCTATAAGATGCTCCTGCCTATTAAATGGAAGGGGTTCAAGAGGCAGTTGCCGAACAATTaGAGGATATCCCTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KEKLYKMLLPIKWKGFKRQLPNN*RISLEK
Trigger: TTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTG...CCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGAGTTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCAAGTAGATAGCCACTaGAAAATGCCTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIQVDSH*KMPLQM
Trigger: CATTTGCAAAGGCATTTTCCAGTGGCTATCTACTTG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGGAAATCAGTTTGACGTaGTATCATGTGTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: RLRVKLVSERDVVLQYEREISLT*YHVSKS
Trigger: AGACTTAGACACATGATACCACGTCAAACTGATTTC...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTATCGTGGGCTATTAACTaGTCCATTAACAATTTCCGC +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLSWAIN*SINNFR
Trigger: GCGGAAATTGTTAATGGACCAGTTAATAGCCCACGA...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGATCGTGGGCTATTAACTaGTCCATTAACAATTTCCGC +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRSWAIN*SINNFR
Trigger: GCGGAAATTGTTAATGGACCAGTTAATAGCCCACGA...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCGTGGGCTATTAACTaGTCCATTAACAATTTCCGC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSWAIN*SINNFR
Trigger: GCGGAAATTGTTAATGGACCAGTTAATAGCCCACGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCGATCAAGAGCATCCTaGAAATCTTTAAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIRSRAS*KSLSRL
Trigger: AAGACGACTTAAAGATTTCCAGGATGCTCTTGATCG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTACATGTTGTGGATCCTaGCTTTCTTTAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTTCCGS*LSLISS
Trigger: AGAGGAGATTAAAGAAAGCCAGGATCCACAACATGT...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTTCTCCATCCTTATCTTaGTTTTCAGCAGCTACACGT +
Preference number: 4 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCSPSLS*FSAATR
Trigger: ACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGA...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTTCCTTCTCTTTTTCTaGTTCAGGAGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHFLLFF*FRRRSR
Trigger: CCTGCTCCTCCTCCTGAACCAGAAAAAGAGAAGGAA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAGAGGAATTCTAAGCTaGCTTTCAGAATTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNRGILS*LSELSL
Trigger: TAAAGACAATTCTGAAAGCCAGCTTAGAATTCCTCT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTGTTCCCTTATTCTGGTaGAAAACCAGCTATACTCAT +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIVPLFW*KTSYTH
Trigger: ATGAGTATAGCTGGTTTTCCACCAGAATAAGGGAAC...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGGGTTACTTTGCTCATaGTCCTCATCATTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVGLLCS*SSSLVW
Trigger: CCAAACTAATGATGAGGACCATGAGCAAAGTAACCC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTTAACAATGTCAGCTTaGAGAAGGGACTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVLTMSA*RRDSRS
Trigger: ACTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAAACATCCAACAAGAAGTaGGCAAATTTAACAATGTCA +
Preference number: 4 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKTSNKK*ANLTMS
Trigger: TGACATTGTTAAATTTGCCCACTTCTTGTTGGATGT...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATACATCCAACAAGAAGTaGGCAAATTTAACAATGTCA +
Preference number: 4 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNTSNKK*ANLTMS
Trigger: TGACATTGTTAAATTTGCCCACTTCTTGTTGGATGT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
3UTR CAA 72 bp ACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTaGACTGTTAATAAAGATGTTAATTCCTGTAATTCA +
Preference number: 4 (lower is better)
Translates to: TNRNFRQSTNSE*TVNKDVNSCNS
Trigger: TGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCATTAAGTTTGGCACTTaGAACCCTGCTGTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVIKFGT*NPAVQK
Trigger: TTTTTGGACAGCAGGGTTTCAAGTGCCAAACTTAAT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTAGATTGAAATCAGTTTaGCGTGGTATCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIRLKSV*RGIMCL
Trigger: TAGACACATGATACCACGTCAAACTGATTTCAATCT...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTTTCAAAGTACGATTTaGTGCAGGTTTAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIFQSTI*CRFRNL
Trigger: CAGATTCCTAAACCTGCATCAAATCGTACTTTGAAA...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTTACCTTAACACAGGTTaGTACTGTCAAAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCYLNTG*YCQSIF
Trigger: GAAAATGCTTTGACAGTATCAACCTGTGTTAAGGTA...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGTAGAGTCAGCAGGTaGTTTCTTTACTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVCRVSR*FLYWYF
Trigger: AAAGTACCAGTAAAGAAATCACCTGCTGACTCTACA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATTCCTGTAATTCATTGGAATGGAAGCTTTaGCTTGTTGGAAGACATGAG +
Preference number: 4 (lower is better)
Translates to: QSTNSELTVNKDVNSCNSLEWKL*LVGRHE
Trigger: CTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAA...TGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR TCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACATACATAGATACTCTTaGCTGGAGCAAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHIHRYS*LEQAEE
Trigger: CTCCTCAGCTTGCTCCAGTCAAGAGTATCTATGTAT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCCACCAAAAGAGTGTaGAAGAACACAGGAATACAT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSTKRV*KNTGIH
Trigger: ATGTATTCCTGTGTTCTTTCACACTCTTTTGGTGGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGTCAAGTTTCTCAAAATaGAAATGGGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGSSFSK*KWARSS
Trigger: AGAAGATCTTGCCCATTTGCATTTTGAGAAACTTGA...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACCGTCTTTTCTCCCTTTaGTCTCGTGCAAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHRLFSL*SRAKAS
Trigger: AGATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACG...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGACAACATTCGATAGTCTaGCACTTTAGTGGACAAATC +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRQHSIV*HFSGQI
Trigger: GATTTGTCCACTAAAGTGGCAGACTATCGAATGTTG...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACGAATATGGCCCAGTATaGAATTGTTGGAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHEYGPV*NCWRVV
Trigger: TACCACCCTCCAACAATTGCATACTGGGCCATATTC...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCTTTAATCTCCTCTTaGAGAACTGGTAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSLISS*RTGRAS
Trigger: AGATGCTCTACCAGTTCTGCAAGAGGAGATTAAAGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACGCAGCACATCAGGAATaGTCTTTCCTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHAAHQE*SFLSSA
Trigger: TGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGC...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp CTGGTTCATAATGTGCAGTCAGGATGGATACCTCTTTTTCTCCAAATTCTTGATTCTATAAGATGCTCCTaGCTATTAAATGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVHNVQSGWIPLFLQILDSIRCS*LLNGRG
Trigger: ACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGA...ATCAAGAATTTGGAGAAAAAGAGGTATCCATCCTGACTGCACATTATGAACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp CTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTATTTTAATATCTGTTCTCTCCCTCTATaGTATGGGTACCATCACTTC +
Preference number: 4 (lower is better)
Translates to: LSITSLYMFTPLENYFNICSLPL*YGYHHF
Trigger: GAAGTGATGGTACCCATAGCATAGAGGGAGAGAACA...GATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTACAGAAGGTTAAGTGTTaGCTCCAAGCGAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVQKVKC*LQARKI
Trigger: AATTTTTCTCGCTTGGAGCCAACACTTAACCTTCTG...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGACAGAAGGTTAAGTGTTaGCTCCAAGCGAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRQKVKC*LQARKI
Trigger: AATTTTTCTCGCTTGGAGCCAACACTTAACCTTCTG...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTGAAATCAGTTTGACGTaGTATCATGTGTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCEISLT*YHVSKS
Trigger: AGACTTAGACACATGATACCACGTCAAACTGATTTC...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTGAAATCAGTTTGACGTaGTATCATGTGTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIEISLT*YHVSKS
Trigger: AGACTTAGACACATGATACCACGTCAAACTGATTTC...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTATATTTAACAAATCGGTaGTTGTCTGGCCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLYLTNR*LSGLLY
Trigger: ATACAGCAGGCCAGACAACCACCGATTTGTTAAATA...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCGATCAAGAGCATCCTaGAAATCTTTAAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVRSRAS*KSLSRL
Trigger: AAGACGACTTAAAGATTTCCAGGATGCTCTTGATCG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCTTGTTGTCCTCTACTaGGATTTTACTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVLVVLY*DFTFHS
Trigger: GGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCTGTTTCCAGAGAAATaGATATTCGAGGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVLFPEK*IFEELE
Trigger: CTCTAGTTCCTCGAATATCCATTTCTCTGGAAACAG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp CTGGTTCATAATGTGCAGTCAGGATGGATACCTCTTTTTCTCCAAATTCTTGATTCCTGTAATTCAGGTTaGGTAAGGTGCATCCAATTA +
Preference number: 4 (lower is better)
Translates to: LVHNVQSGWIPLFLQILDSCNSG*VRCIQL
Trigger: TAATTGGATGCACCTTACCCAACCTGAATTACAGGA...ATCAAGAATTTGGAGAAAAAGAGGTATCCATCCTGACTGCACATTATGAACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp CATCCAATTACTAGGAAAGTTGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATACATCCAACAAGAAGTaGGCAAATTTAACAATGTCA +
Preference number: 4 (lower is better)
Translates to: HPITRKVVCAKVQGHQIDTSNKK*ANLTMS
Trigger: TGACATTGTTAAATTTGCCCACTTCTTGTTGGATGT...ATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTGGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCACCGTAATCATAGTCTaGTCACCCTTAGGAATAACT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVTVIIV*SPLGIT
Trigger: AGTTATTCCTAAGGGTGACCAGACTATGATTACGGT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTAAGATTGAAATCAGTTTaGCGTGGTATCATGTGTCTA +
Preference number: 4 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLRLKSV*RGIMCL
Trigger: TAGACACATGATACCACGTCAAACTGATTTCAATCT...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTATTTCAAAGTACGATTTaGTGCAGGTTTAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVFQSTI*CRFRNL
Trigger: CAGATTCCTAAACCTGCATCAAATCGTACTTTGAAA...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR TCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAAACTATCACTTGATTTaGCTTCTTCAGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRNYHLI*LLQLLV
Trigger: CACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp AAAGAAAAACTCTATAAGATGCTCCTGCCTATTAAATGGAAGGGGTTCAAGAGGTTTTCTCCAAATTCTTaGTTTATCTTTGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KEKLYKMLLPIKWKGFKRFSPNS*FIFVGH
Trigger: GTGGCCCACAAAGATAAATCAAGAATTTGGAGAAAA...CCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGAGTTTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR GCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACAAAACTTCCTTTTCATaGCGAACATGCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHKTSFS*RTCMSC
Trigger: GCAGCTCATGCATGTTCGGCATGAAAAGGAAGTTTT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAAGTTCCTTCCAATCATaGATCAACTTATACGGAATC +
Preference number: 4 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVSSFQS*INLYGI
Trigger: GATTCCGTATAAGTTGATGCATGATTGGAAGGAACT...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR GCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCAGTTCCTTCCAATCATaGATCAACTTATACGGAATC +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSSFQS*INLYGI
Trigger: GATTCCGTATAAGTTGATGCATGATTGGAAGGAACT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp CAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATTCCTGTAATTCAGCTATTTCTTCAAATTaGAAGGCAGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QSTNSELTVNKDVNSCNSAISSN*KAARCS
Trigger: AGAACACCTTGCTGCCTTGCAATTTGAAGAAATAGC...TGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637061.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGAAATCAGTTTGACGTaGTATCATGTGTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVEISLT*YHVSKS
Trigger: AGACTTAGACACATGATACCACGTCAAACTGATTTC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCCAGAAGCTGTGCTTaGTTTAAAGTCATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSRSCA*FKVIGK
Trigger: TTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCTCTTAAATTTTaGTCTCCATCCTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVWSLKF*SPSLSW
Trigger: CCAAGATAAGGATGGAGACCAAAATTTAAGAGACCA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGATTTGTTCCCTTATTCTaGTGGAAAACCAGCTATACT +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRFVPLF*WKTSYT
Trigger: AGTATAGCTGGTTTTCCACCAGAATAAGGGAACAAA...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp TGTTCTGGAACACCGCTTTGTAAGATAGTTCAAGGTGATGTGCAAAGCAATATAGCATTGACTCTAAAGTaGCAAATATGTCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: CSGTPLCKIVQGDVQSNIALTLK*QICQQL
Trigger: CAATTGCTGACATATTTGCCACTTTAGAGTCAATGC...TATATTGCTTTGCACATCACCTTGAACTATCTTACAAAGCGGTGTTCCAGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGCATTGACTCTAAAGTaGCAAATATGTCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVALTLK*QICQQL
Trigger: CAATTGCTGACATATTTGCCACTTTAGAGTCAATGC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR GCA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGATCAAGTTTCTCAAAATaGAAATGGGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRSSFSK*KWARSS
Trigger: AGAAGATCTTGCCCATTTGCATTTTGAGAAACTTGA...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp CTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTATTTTAATATCGCTATTTCTTCAAATTaGAAGGCAGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSITSLYMFTPLENYFNIAISSN*KAARCS
Trigger: AGAACACCTTGCTGCCTTGCAATTTGAAGAAATAGC...GATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637061.1
CDS-3UTR CCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACCCAGTATGCAATTGTTaGAGGGTGGTAAATTGTCAA +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHPVCNC*RVVNCQ
Trigger: TTGACAATTTACCACCCTCCAACAATTGCATACTGG...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACAGAAACACTAGAGTCTaGTTTCAGGAAATGGCTCAA +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHRNTRV*FQEMAQ
Trigger: TTGAGCCATTTCCTGAAACCAGACTCTAGTGTTTCT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTTTAGTTCTGAATACTaGGCCAATATCAACACCTTT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVFSSEY*ANINTF
Trigger: AAAGGTGTTGATATTGGCCCAGTATTCAGAACTAAA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CCA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTTGATGGCTTCTTTTTaGAAGATAATGGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KNNELYARPKGTQTVIIVLMASF*KIMVKL
Trigger: AAGCTTGACCATTATCTTCCAAAAAGAAGCCATCAA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR TCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTCTAGGATACAGTCTTaGTTCACAGGTATCTCATTA +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHSRIQS*FTGISL
Trigger: TAATGAGATACCTGTGAATCAAGACTGTATCCTAGA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR TCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACCTTGTTTCATATGATTaGAGTTGCCCAAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHLVSYD*SCPKSE
Trigger: TTCAGACTTTGGGCAACTTCAATCATATGAAACAAG...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACAGTTCCTTCCAATCATaGATCAACTTATACGGAATC +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHSSFQS*INLYGI
Trigger: GATTCCGTATAAGTTGATGCATGATTGGAAGGAACT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR GCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTTCATTGTCATGAAATaGTTGGATAGCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHFIVMK*LDSFLD
Trigger: GTCCAAGAAGCTATCCAAGCATTTCATGACAATGAA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CCA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTTAATGCTAGACTTATaGTCCATAGCGGTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: TQMDTDTLPISCITTIKHLMLDL*SIAVKD
Trigger: ATCCTTAACCGCTATGGACCATAAGTCTAGCATTAA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS CCA 90 bp TTGGGACTCACGGTCCGGGACACCTTCAACTCCTTGTTGAGCCACTaGCACAGGATCTCCGACATGGTTCAGCCGGTGCCTCAGACCGCA +
Preference number: 5 (lower is better)
Translates to: LGLTVRDTFNSLLSH*HRISDMVQPVPQTA
Trigger: TGCGGTCTGAGGCACCGGCTGAACCATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTCCCGGACCGTGAGTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CCA 90 bp CCTGCCAGCCCGCGTCCTCCTGTAGCCAAGGGCAACCCTTTGCTATaGAAGCGTATCCAGGCTGGAACTAGGCGAAAGGCCTTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PASPRPPVAKGNPLL*KRIQAGTRRKALEK
Trigger: CTTCTCTAAGGCCTTTCGCCTAGTTCCAGCCTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGGCTACAGGAGGACGCGGGCTGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282469.10
ENST00000509059.5
ENST00000637569.1
CDS TCA 90 bp CAAATGACTTGGGACTCACGGTCCGGGACACCTTCAACTCCTTGTTaGGCCACTGGCACAGGATCTCCGACATGGTTCAGCCGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: QMTWDSRSGTPSTPC*ATGTGSPTWFSRCL
Trigger: GAGGCACCGGCTGAACCATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTCCCGGACCGTGAGTCCCAAGTCATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS GCA 90 bp TTTTCATGCCGAACATGCATGAGCTGCACGGCAATCCTGCGCTCCTaGTGGGACTGCCGCATCAGCCGGTTAATCAGCTGTTCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: FSCRTCMSCTAILRS*WDCRISRLISCSSR
Trigger: TCGGGAGGAACAGCTGATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGCTCATGCATGTTCGGCATGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS GCA 90 bp AGAGTGTCCTGTAACCAGCTCTCATTAATGATGTCAAGCCGCTCCTaGTCCGCCTCTTCCTTCCGGGCATCACAAATGTCCCACAGGCGG +
Preference number: 5 (lower is better)
Translates to: RVSCNQLSLMMSSRS*SASSFRASQMSHRR
Trigger: CCGCCTGTGGGACATTTGTGATGCCCGGAAGGAAGAGGCGGAGCAGGAGCGGCTTGACATCATTAATGAGAGCTGGTTACAGGACACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS GCA 90 bp AAGATGTTCTTCAGGTTCCTCCATAGACCCCGAGCACTGCAGAACTaGATGTTGCACCCAACCCTAGTGGCTAGGCTCCCACTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: KMFFRFLHRPRALQN*MLHPTLVARLPLSP
Trigger: TGGGCTGAGTGGGAGCCTAGCCACTAGGGTTGGGTGCAACATGCAGTTCTGCAGTGCTCGGGGTCTATGGAGGAACCTGAAGAACATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCGCCTTTGCAAATGACTaGGGACTCACGGTCCGGGAC +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTAFAND*GLTVRD
Trigger: GTCCCGGACCGTGAGTCCCAAGTCATTTGCAAAGGC...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCAGTATGAAAGGGGGTaGGTGTCAGCCTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTQYERG*VSASAL
Trigger: GAGGGCAGAGGCTGACACCAACCCCCTTTCATACTG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS TCA 90 bp TCAGAGGAAGGGGGAGGTGAGGGCTACCTTTGTTCAGCTGTAGTTTaGGGACATGAGATGATGGGGAGTCAGGAGACCTGGACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SEEGGGEGYLCSAVV*GHEMMGSQETWTLA
Trigger: AGCCAAAGTCCAGGTCTCCTGACTCCCCATCATCTCATGTCCTCAAACTACAGCTGAACAAAGGTAGCCCTCACCTCCCCCTTCCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGAACAGCGACTTCAATaGGCTCCAGGTTCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVEQRLQ*APGSWH
Trigger: GTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS TCA 90 bp GTTGCCACCCCAGGCTTTTCTGTGATGATGCCATGGGCCACATTCTaGTCAAACTGCACACCCAGAAGGTTAAGTGTTGGCTCCAAGCGA +
Preference number: 5 (lower is better)
Translates to: VATPGFSVMMPWATF*SNCTPRRLSVGSKR
Trigger: TCGCTTGGAGCCAACACTTAACCTTCTGGGTGTGCAGTTTGATCAGAATGTGGCCCATGGCATCATCACAGAAAAGCCTGGGGTGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCCGTCTTTTCTCCCTTaGCTCTCGTGCAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTPSFLP*LSCKSI
Trigger: GATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACGG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGGAATGGGCCAAGGCATaGAGGTTACTAACAGGAACT +
Preference number: 5 (lower is better)
Translates to: LELLKGLKELLLQGNGPREWAKA*RLLTGT
Trigger: AGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTC...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGCTGGAGAGCTACTTGTaGCTTCCATTAATGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LELLKGLKELLLQGNGPRLESYL*LPLMRP
Trigger: AGGCCTCATTAATGGAAGCAACAAGTAGCTCTCCAG...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCGCCAAGGGCAACCCTTaGCTATGGAAGCGTATCCAG +
Preference number: 5 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSAKGNP*LWKRIQ
Trigger: CTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGGC...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTGGCCCAGTATGCAATaGTTGGAGGGTGGTAAATTG +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVWPSMQ*LEGGKL
Trigger: CAATTTACCACCCTCCAACAATTGCATACTGGGCCA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGAAGGTAATTCAGGTGTaGTTGATTCCGCTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVKVIQV*LIPLEE
Trigger: CTCCTCGAGCGGAATCAACAACACCTGAATTACCTT...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTTCAGCAGCTACACGTaGACTGATATCTTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTFSSYT*TDIFVS
Trigger: GCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTCATCGGCCTCAAAGTaGGACTCAACGTTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTSSASK*DSTFSR
Trigger: CCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATGA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGAATGGGCCAAGGCATaGAGGTTACTAACAGGAACT +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVEWAKA*RLLTGT
Trigger: AGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTGAATGGGCCAAGGCATaGAGGTTACTAACAGGAACT +
Preference number: 5 (lower is better)
Translates to: PPREWAKALRLLTGTSASEWAKA*RLLTGT
Trigger: AGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTC...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTGGACCTGCATCAGTaGAGGAGGTCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: VASKVKQHLCVVKLGWILLDLHQ*RRSFLH
Trigger: GTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAG...AAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp CCTCCAAGGGAATGGGCCAAGGCATTGAGGTTACTAACAGGAACTTCCGCCAGTGTCCTCATCATTAGTTaGGTGGTGGCTCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: PPREWAKALRLLTGTSASVLIIS*VVALFT
Trigger: AGTGAACAGAGCCACCACCAAACTAATGATGAGGAC...ACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAGTAGGGCCACCTCGTaGTTCTCTCCCTCTATGCTA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISRATS*FSPSML
Trigger: TAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCAGCCCTCACCACATTTaGGCTGGCATCTCTGAAACA +
Preference number: 5 (lower is better)
Translates to: WVASKVKQHLCVVKLGWISPHHI*AGISET
Trigger: TGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGCT...GATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS CCA 90 bp CCCCCACGATTCAATCATCTCCCACCAGGTCCCTCCCACAACATGTaGGAATTATGGGAGCTACAATTCAAGATGAGATTTGGATGGGGA +
Preference number: 5 (lower is better)
Translates to: PPRFNHLPPGPSHNM*ELWELQFKMRFGWG
Trigger: TCCCCATCCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTTGTGGGAGGGACCTGGTGGGAGATGATTGAATCGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGAAAGTCAATCTTGGCTaGTTTTGCCAAAGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVKVNLG*FCQSRF
Trigger: GAAGCGGCTTTGGCAAAACAAGCCAAGATTGACTTT...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCCCAGTATGCAATTGTaGGAGGGTGGTAAATTGTCA +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTPSMQL*EGGKLS
Trigger: TGACAATTTACCACCCTCCAACAATTGCATACTGGG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTCCTGAAGAGATTCTaGCTTACCATGCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIFLKRF*LTMRGF
Trigger: GAAGCCCCGCATGGTAAGCAAGAATCTCTTCAGGAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CTTGAACTTCTGAAGGGTCTCAAGGAGCTCCTCCTCCAAGGGAATGGGCCAAGGCAATTACTAGGAAAGTaGTTTGTGCCAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LELLKGLKELLLQGNGPRQLLGK*FVPRFR
Trigger: CCTGAACCTTGGCACAAACAACTTTCCTAGTAATTG...CCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGACCTTCAACTCCTTGTaGAGCCACTGGCACAGGATC +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISETFNSL*SHWHRI
Trigger: GATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGACACCTTCAACTCCTaGTTGAGCCACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNDTFNS*LSHWHR
Trigger: CCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACAATCTTGGCTTGTTTaGCCAAAGCCGCTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIQSWLV*PKPLLD
Trigger: ATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATTG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAGTAATTCAGGTGTTGTaGATTCCGCTCGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIVIQVL*IPLEEE
Trigger: TTCCTCCTCGAGCGGAATCAACAACACCTGAATTAC...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAGGAGAACCTTTTCTTTaGAGTGCGGTCTCACCTTTC +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIGEPFL*SAVSPF
Trigger: GAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTCC...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCTGGACCTGCATCAGTaGAGGAGGTCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISELDLHQ*RRSFLH
Trigger: GTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CTTCCACGGTGTCTGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAACCCCCTTTGAACACTTaGAGTAGTGTTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: LPRCLGGKQSKAASVCSQPPLNT*SSVSMD
Trigger: GTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGG...TTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTTGGCTGGCAAATCTATaGGAGTCCTGTGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: VASKVKQHLCVVKLGWILWLANL*ESCASL
Trigger: AAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCA...AAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TGTAGACTCCTTCCACGGTGTCTGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGCTCTCCATCACTTCCTaGTACATGTTCACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: CRLLPRCLGGKQSKAASVLSITS*YMFTPL
Trigger: CAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG...CACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACTGGAGAGCTACTTGTaGCTTCCATTAATGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILESYL*LPLMRP
Trigger: AGGCCTCATTAATGGAAGCAACAAGTAGCTCTCCAG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAGGGGACGTCCGGTCTaGGCAATAGCATGGCATGAT +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNRGRPV*AIAWHD
Trigger: ATCATGCCATGCTATTGCCAAGACCGGACGTCCCCT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCATCCAAATAAAATCTTaGAGGGGACGTCCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: WVASKVKQHLCVVKLGWIIQIKS*RGRPVL
Trigger: CAAGACCGGACGTCCCCTCAAAGATTTTATTTGGAT...GATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS GCA 90 bp TCTTGGTCTCACTGTTTCCACATCCCACATCTCACTACTCAGTTCTaGTTCCTTACCTACTCTAAGTTGTCTGCAGCTCTTTCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SWSHCFHIPHLTTQF*FLTYSKLSAALSQG
Trigger: CCCCTGAGAAAGAGCTGCAGACAACTTAGAGTAGGTAAGGAAGCAGAACTGAGTAGTGAGATGTGGGATGTGGAAACAGTGAGACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CCA 90 bp ATAGATTTAGACTGGATCAAAGATTTCACACTGATGACTGTCATCTaGAGGAGCCTCAGGGGCAATGAGGATGGTACTGGTGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: IDLDWIKDFTLMTVI*RSLRGNEDGTGGRR
Trigger: CCTCCTTCCACCAGTACCATCCTCATTGCCCCTGAGGCTCCTCCAGATGACAGTCATCAGTGTGAAATCTTTGATCCAGTCTAAATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CCA 90 bp TCCCGAGGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTGGTaGCTCTGTTCACTGGAGAGCTACTTGTTGCTTCCATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: SRGLLCSWSSSLVWW*LCSLESYLLLPLMR
Trigger: CCTCATTAATGGAAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637569.1
CDS CCA 90 bp CTCTCCCGAGGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTaGTGGCTCTGTTCACTGGAGAGCTACTTGTTGCTTCCATTAATG +
Preference number: 5 (lower is better)
Translates to: LSRGLLCSWSSSLVW*WLCSLESYLLLPLM
Trigger: CATTAATGGAAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637569.1
CDS-3UTR CAA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGGACACCTTCAACTCCTaGTTGAGCCACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: RLRVKLVSERDVVLQYERDTFNS*LSHWHR
Trigger: CCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTC...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTGCCTTTGCAAATGACTaGGGACTCACGGTCCGGGAC +
Preference number: 5 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIAFAND*GLTVRD
Trigger: GTCCCGGACCGTGAGTCCCAAGTCATTTGCAAAGGC...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACACTGGAAAATGCCTTaGCAAATGACTTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIHWKMP*QMTWDS
Trigger: TGAGTCCCAAGTCATTTGCAAAGGCATTTTCCAGTG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCTTTTTCATCATTTTTaGGGCCTCGAGTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTLFHHF*GLECFQ
Trigger: TTGAAAGCACTCGAGGCCCAAAAAATGATGAAAAAG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTAACAAATCGGTGGTaGTCTGGCCTGCTGTATCTA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILTNRW*SGLLYL
Trigger: TAGATACAGCAGGCCAGACAACCACCGATTTGTTAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCCAATCTTGGCTTGTTTaGCCAAAGCCGCTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSQSWLV*PKPLLD
Trigger: ATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATTG...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAAAGTCAATCTTGGCTaGTTTTGCCAAAGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIKVNLG*FCQSRF
Trigger: GAAGCGGCTTTGGCAAAACAAGCCAAGATTGACTTT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGTCTTAACAGAGGCTaGTTCATATATGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTCLNRG*FIYGFC
Trigger: GCAAAACCCATATATGAACAAGCCTCTGTTAAGACA...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACCCAGTATGCAATTGTaGGAGGGTGGTAAATTGTCA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIPSMQL*EGGKLS
Trigger: TGACAATTTACCACCCTCCAACAATTGCATACTGGG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCGTAATTCAGGTGTTGTaGATTCCGCTCGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSVIQVL*IPLEEE
Trigger: TTCCTCCTCGAGCGGAATCAACAACACCTGAATTAC...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGGCAACTGTTCTGATTTaGCACCAAGCTGAGCACGTG +
Preference number: 5 (lower is better)
Translates to: FSMCGPDLLGGYVISELQATVLI*HQAEHV
Trigger: CACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGC...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGTCCAATAAAGGCCAGTaGTCCAAGAAGCCTATAATT +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVSNKGQ*SKKPII
Trigger: AATTATAGGCTTCTTGGACAACTGGCCTTTATTGGA...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTCCTGAAGAGATTCTaGCTTACCATGCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEFLKRF*LTMRGF
Trigger: GAAGCCCCGCATGGTAAGCAAGAATCTCTTCAGGAA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGGTGGCTGTGGCACTATaGCAACAGGTGATGTATCTG +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEVAVAL*QQVMYL
Trigger: CAGATACATCACCTGTTGCAATAGTGCCACAGCCAC...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATTGAGCTACAAAATCTaGCTTGTGATCCGGACGCTT +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILSYKI*LVIRTL
Trigger: AAGCGTCCGGATCACAAGCAAGATTTTGTAGCTCAA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCGAGTAAATCTCTTGTaGTCCTCTACTGGGATTTTA +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTRVNLL*SSTGIL
Trigger: TAAAATCCCAGTAGAGGACAACAAGAGATTTACTCG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCCAGTTCAAGTCGAAATaGCGTGGCTATTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTQFKSK*RGYFFK
Trigger: TTTGAAGAAATAGCCACGCAATTTCGACTTGAACTG...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGAAGAGCCAATGCTTTaGTCTTTATCAGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVEEPML*SLSVQV
Trigger: GACTTGAACTGATAAAGACAAAAGCATTGGCTCTTC...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CTTTGTGGGCCACAATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTTGCTGGACCTGCATCAGTaGAGGAGGTCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: LCGPQFKTSNHGSPHHILLDLHQ*RRSFLH
Trigger: GTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAG...CAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATTGTGGCCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp AAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTACCCCCTTTGAACACTTaGAGTAGTGTTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: KDASREQRLQLAPGSWHLPPLNT*SSVSMD
Trigger: GTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGG...TAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTGGCTGGCAAATCTATaGGAGTCCTGTGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: AGKSIGVLCFTSPFEHFEWLANL*ESCASL
Trigger: AAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCA...CTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp CAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGCTCTCCATCACTTCCTaGTACATGTTCACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: QEIPQLDLHQLRRSFLHLLSITS*YMFTPL
Trigger: CAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG...CAAGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCCAGACGTGTATCCTCTaGATCTGCCTGAAGTTACCT +
Preference number: 5 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSQTCIL*ICLKLP
Trigger: AGGTAACTTCAGGCAGATCAAGAGGATACACGTCTG...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp TGTAGACTCCTTCCACGGTGTCTGGGTGGCAAGCAAAGTAAAGCAGCATCTGTGCTTTTGGCCCTAGTCTaGTTTGATACATTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: CRLLPRCLGGKQSKAASVLLALV*FDTFGA
Trigger: TGCTCCAAATGTATCAAACAAGACTAGGGCCAAAAG...CACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp GGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTGGTGGCTCTGTTCACTGCCACCATGCGTTCTTTaGGCCCTAGTCTTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: GLLCSWSSSLVWWWLCSLPPCVL*ALVLFD
Trigger: ATCAAACAAGACTAGGGCCAAAAGAACGCATGGTGG...CAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS CCA 90 bp GGTAATTACAACTGTTATTCTTGCATATGGGTTAATTCTCCAGCTTaGGTGGGAGGAGGTGGTTCCTCACACAGAGAAAGCCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GNYNCYSCIWVNSPA*VGGGGSSHRESLLF
Trigger: GAAGAGGAGGCTTTCTCTGTGTGAGGAACCACCTCCTCCCACCCAAGCTGGAGAATTAACCCATATGCAAGAATAACAGTTGTAATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635995.1
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTGCCAAGGGCAACCCTTaGCTATGGAAGCGTATCCAG +
Preference number: 5 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCAKGNP*LWKRIQ
Trigger: CTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGGC...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTGACACCTTCAACTCCTaGTTGAGCCACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCDTFNS*LSHWHR
Trigger: CCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTC...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTGACACCTTCAACTCCTaGTTGAGCCACTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIDTFNS*LSHWHR
Trigger: CCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTC...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCCTTTGCAAATGACTaGGGACTCACGGTCCGGGAC +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVAFAND*GLTVRD
Trigger: GTCCCGGACCGTGAGTCCCAAGTCATTTGCAAAGGC...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGCCTTTGCAAATGACTaGGGACTCACGGTCCGGGAC +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVAFAND*GLTVRD
Trigger: GTCCCGGACCGTGAGTCCCAAGTCATTTGCAAAGGC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCGAAAAATTATTAAGTTaGGCACTTGAAACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTEKLLS*ALETLL
Trigger: CAGCAGGGTTTCAAGTGCCAAACTTAATAATTTTTC...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGGATATAACAGCTTTGTaGCCACCCCAGGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEDITAL*PPQAFL
Trigger: CAGAAAAGCCTGGGGTGGCAACAAAGCTGTTATATC...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGCTGTATAATAGCTGCTaGGATTTTGGCCATTATTTC +
Preference number: 5 (lower is better)
Translates to: GLAIVDAHLACVVQTCLVLYNSC*DFGHYF
Trigger: GAAATAATGGCCAAAATCCAAGCAGCTATTATACAG...CACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCAATCTTGGCTTGTTTaGCCAAAGCCGCTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVQSWLV*PKPLLD
Trigger: ATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATTG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACTTTTCATAACGAGCTaGAGCTCTTTCCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILFITS*SSFHSN
Trigger: ATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGTAATTCAGGTGTTGTaGATTCCGCTCGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVVIQVL*IPLEEE
Trigger: TTCCTCCTCGAGCGGAATCAACAACACCTGAATTAC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGCAACTGTTCTGATTTaGCACCAAGCTGAGCACGTG +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNATVLI*HQAEHV
Trigger: CACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGTCTCCATCCTTATCTaGGTTTTCAGCAGCTACACG +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVVSILI*VFSSYT
Trigger: CGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGAC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGGAGTCTCTTTGTATCTaGGAAACGGTTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEESLCI*ETVQLC
Trigger: GCAGAGCTGAACCGTTTCCAAGATACAAAGAGACTC...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACTTGAAGGAGTCTCTTaGTATCTTGGAAACGGTTCA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILEGVS*YLGNGS
Trigger: TGAACCGTTTCCAAGATACAAAGAGACTCCTTCAAG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAAGCTGGCTTTCAGAATaGTCTTTACTATCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISWLSE*SLLSSW
Trigger: CCAACTGGATAGTAAAGACAATTCTGAAAGCCAGCT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAGGCCTGGGACTCGCCATAGTGGATGCACATTTAGCATGTGTGGTCCAGACCGATTTTGTTTTTGGTTaGGGTGTAACTGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KGLGLAIVDAHLACVVQTDFVFG*GVTVSR
Trigger: TCTGGAAACAGTTACACCCAAACCAAAAACAAAATC...GGTCTGGACCACACATGCTAAATGTGCATCCACTATGGCGAGTCCCAGGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGCAATTACTAGGAAAGTaGTTTGTGCCAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: QEIPQLDLHQLRRSFLHLQLLGK*FVPRFR
Trigger: CCTGAACCTTGGCACAAACAACTTTCCTAGTAATTG...CAAGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTTGTTTGTGCCAAGGTTCTGGACCTGCATCAGTaGAGGAGGTCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: FRLGKVHPITRKVVCAKVLDLHQ*RRSFLH
Trigger: GTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAG...AACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGCCCCCTTTGAACACTTaGAGTAGTGTTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: FSMCGPDLLGGYVISELQPPLNT*SSVSMD
Trigger: GTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGG...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATAGTCAGCAAATAGCTTCACTTCCCCCTTaGAACACTTTGAGTAGTGTT +
Preference number: 5 (lower is better)
Translates to: AASVCSQAGVDPSHSQQIASLPP*NTLSSV
Trigger: AACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC...TATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTGGCTGGCAAATCTATaGGAGTCCTGTGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEWLANL*ESCASL
Trigger: AAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GTTTCTCACAGCAGAAATGTTTTCTTTCCCTCTGAGGCAGTTACCATGAAAGTGGAACAGCGACTTCAATaGGCTCCAGGTTCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: VSHSRNVFFPSEAVTMKVEQRLQ*APGSWH
Trigger: GTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTC...CACTTTCATGGTAACTGCCTCAGAGGGAAAGAAAACATTTCTGCTGTGAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp TTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTTGTTTGTGCCAAGGTTGAACAGCGACTTCAATaGGCTCCAGGTTCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: FRLGKVHPITRKVVCAKVEQRLQ*APGSWH
Trigger: GTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTC...AACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp CAATTACTAGGAAAGTTGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGAGAACAGCGACTTCAATaGGCTCCAGGTTCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QLLGKLFVPRFRVTKSIREQRLQ*APGSWH
Trigger: GTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTC...TCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GGCAGTTACCATGAAAGTGTGTGGCTGAATCCACCATGCGTTCTTTTGGCCCTATTTCCTCTGTATGTCTaGAAGGTGATCTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: GSYHESVWLNPPCVLLALFPLYV*KVISLH
Trigger: ATGGAGAGAGATCACCTTCAAGACATACAGAGGAAA...TAGGGCCAAAAGAACGCATGGTGGATTCAGCCACACACTTTCATGGTAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAGATGAGCCACCATGCTaGGCCTGTCTTCCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRDEPPC*ACLPQF
Trigger: GAACTGGGGAAGACAGGCCAAGCATGGTGGCTCATC...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AATTTAAAACTTCCAATCACGGTAGCCCTCACCACATTTTGGCTGGCATCTCTGCTCCCGAGGGTTACTTaGCTCATGGTCCTCATCATT +
Preference number: 5 (lower is better)
Translates to: NLKLPITVALTTFWLASLLPRVT*LMVLII
Trigger: AATGATGAGGACCATGAGCAAAGTAACCCTCGGGAG...CAGAGATGCCAGCCAAAATGTGGTGAGGGCTACCGTGATTGGAAGTTTTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp TTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGAATGTCAGTAAATGCTTTAAGGGGACGTCCGGTCTaGGCAATAGCATGGCATGAT +
Preference number: 5 (lower is better)
Translates to: FVPRFRVTKSIRMSVNALRGRPV*AIAWHD
Trigger: ATCATGCCATGCTATTGCCAAGACCGGACGTCCCCT...TAAAGCATTTACTGACATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp TTACTAGGAAAGTTGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGAATGAGTAGGGCCACCTCGTaGTTCTCTCCCTCTATGCTA +
Preference number: 5 (lower is better)
Translates to: LLGKLFVPRFRVTKSIRMSRATS*FSPSML
Trigger: TAGCATAGAGGGAGAGAACAACGAGGTGGCCCTACT...CATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp TTCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCATTGCAGGATATCCCTaGAGAAAGTTCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: FSIFRWLANLLESCASLPIAGYP*RKFWRA
Trigger: AGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAAT...GGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp GTGGCAAGCAAAGTAAAGCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTGGAGCATTTCCAGCATaGACTCTAAAGTGGCAAATA +
Preference number: 5 (lower is better)
Translates to: VASKVKQHLCVVKLGWILGAFPA*TLKWQI
Trigger: TATTTGCCACTTTAGAGTCAATGCTGGAAATGCTCC...AAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACTTTTGGCCCTAGTCTaGTTTGATACATTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILLALV*FDTFGA
Trigger: TGCTCCAAATGTATCAAACAAGACTAGGGCCAAAAG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CAGTTGCCGAACAATTGCAGGATATCCCTTGAGAAAGTTCTGGAGGGCTGCCTGATCTCTGAAACAGCCTaGAAGTCTCTTGATAAGATG +
Preference number: 5 (lower is better)
Translates to: QLPNNCRISLEKVLEGCLISETA*KSLDKM
Trigger: CATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGAT...CAGGCAGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAATTGTTCGGCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS TCA 90 bp TGTCTCCTATTTGAGAAGGCATCACAGGTCGAAGGTGAAGGCCTTTaGAAGCAGTTCTCAGAGCACTCTTTAGGTGCCATATCTAAGAAC +
Preference number: 5 (lower is better)
Translates to: CLLFEKASQVEGEGL*KQFSEHSLGAISKN
Trigger: GTTCTTAGATATGGCACCTAAAGAGTGCTCTGAGAACTGCTTTCAAAGGCCTTCACCTTCGACCTGTGATGCCTTCTCAAATAGGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513078.1
CDS CCA 90 bp GTGCCATATCTAAGAACTGATCTCGAAGACTGTCAAGCTGTTCAATaGTCAGGGTACCATCTTCTTCCTTTTCTACAGGTGGAGGACGTA +
Preference number: 5 (lower is better)
Translates to: VPYLRTDLEDCQAVQ*SGYHLLPFLQVEDV
Trigger: TACGTCCTCCACCTGTAGAAAAGGAAGAAGATGGTACCCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
ENST00000637569.1
CDS CCA 90 bp ATTACAACTGTTATTCTTGCATATGGGTTAATTCTCCAGCTTGGGTaGGAGGAGGTGGTTCCTCACACAGAGAAAGCCTCCTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: ITTVILAYGLILQLG*EEVVPHTEKASSST
Trigger: AGTAGAAGAGGAGGCTTTCTCTGTGTGAGGAACCACCTCCTCCCACCCAAGCTGGAGAATTAACCCATATGCAAGAATAACAGTTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635995.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGCCAAGGGCAACCCTTaGCTATGGAAGCGTATCCAG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVAKGNP*LWKRIQ
Trigger: CTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGGC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCACTGGAAAATGCCTTaGCAAATGACTTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVHWKMP*QMTWDS
Trigger: TGAGTCCCAAGTCATTTGCAAAGGCATTTTCCAGTG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACTTTTTCATCATTTTTaGGGCCTCGAGTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILFHHF*GLECFQ
Trigger: TTGAAAGCACTCGAGGCCCAAAAAATGATGAAAAAG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTAACAAATCGGTGGTaGTCTGGCCTGCTGTATCTA +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISELTNRW*SGLLYL
Trigger: TAGATACAGCAGGCCAGACAACCACCGATTTGTTAA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCTGCTTGGATAGCTTCTaGGACAAGAGTGTCAATAGA +
Preference number: 5 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSCLDSF*DKSVNR
Trigger: TCTATTGACACTCTTGTCCAAGAAGCTATCCAAGCA...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGTCTGTGAGGTTTCTATaGCAGCCTGTAAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FSMCGPDLLGGYVISELQSVRFL*QPVRAS
Trigger: AGAAGCTCTTACAGGCTGCAATAGAAACCTCACAGA...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTCAGCAGCTACACGTaGACTGATATCTTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNFSSYT*TDIFVS
Trigger: GCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGAGCTACAAAATCTaGCTTGTGATCCGGACGCTT +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISELSYKI*LVIRTL
Trigger: AAGCGTCCGGATCACAAGCAAGATTTTGTAGCTCAA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGATGTAGTTCAGCCTTaGTTTCCTCATCATCCCACA +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVDVVQP*FPHHPT
Trigger: TGTGGGATGATGAGGAAACAAAGGCTGAACTACATC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGAGTCTCTTTGTATCTaGGAAACGGTTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNESLCI*ETVQLC
Trigger: GCAGAGCTGAACCGTTTCCAAGATACAAAGAGACTC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAATTCGAGTAAATCTCTaGTTGTCCTCTACTGGGATT +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIIRVNL*LSSTGI
Trigger: AATCCCAGTAGAGGACAACAAGAGATTTACTCGAAT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTCATCGGCCTCAAAGTaGGACTCAACGTTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNSSASK*DSTFSR
Trigger: CCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATGA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CAGGAAATTCCTCAGCTGGACCTGCATCAGTTGAGGAGGTCTTTTCTGCACTTGTCCACGAACTCGGAGTaGACTGTTAATAAAGATGTT +
Preference number: 5 (lower is better)
Translates to: QEIPQLDLHQLRRSFLHLSTNSE*TVNKDV
Trigger: AACATCTTTATTAACAGTCAACTCCGAGTTCGTGGA...CAAGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGAATGGGCCAAGGCATaGAGGTTACTAACAGGAACT +
Preference number: 5 (lower is better)
Translates to: ANLLESCASLPPLNTLSSEWAKA*RLLTGT
Trigger: AGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTC...ACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TCTACTCTCCCGAGGGTTACTTTGCTCATGGTCCTCATCATTAGTTTGGTGGTGAATGGAAGCTTTGACTaGTTGGAAGACATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: STLPRVTLLMVLIISLVVNGSFD*LEDMSS
Trigger: GGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATT...CACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGAGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGGCTTCACTTCCCCCTTaGAACACTTTGAGTAGTGTT +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVASLPP*NTLSSV
Trigger: AACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCAGTTTCTCTGGGGTTaGTCCTTAGTTTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVQFLWG*SLVSPS
Trigger: AGATGGAGAAACTAAGGACAAACCCCAGAGAAACTG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCAATAGCATGGCATGATCTGAATAAGTTCTCTACTCTCCCGAGGGTTACTTTGATTGCAGGATATCCCTaGAGAAAGTTCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: AIAWHDLNKFSTLPRVTLIAGYP*RKFWRA
Trigger: AGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAAT...CAAAGTAACCCTCGGGAGAGTAGAGAACTTATTCAGATCATGCCATGCTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATATTGCAGGATATCCCTaGAGAAAGTTCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNIAGYP*RKFWRA
Trigger: AGCCCTCCAGAACTTTCTCAAGGGATATCCTGCAAT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCCACCATGCGTTCTTTaGGCCCTAGTCTTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNPPCVL*ALVLFD
Trigger: ATCAAACAAGACTAGGGCCAAAAGAACGCATGGTGG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATATCACTAAGTTTCACATaGGCAGCTTCTAATACTGGT +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGISLSFT*AASNTG
Trigger: ACCAGTATTAGAAGCTGCCAATGTGAAACTTAGTGA...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTCTGCAGAACTGCATGTaGCACCCAACCCTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCLQNCM*HPTLVA
Trigger: AGCCACTAGGGTTGGGTGCAACATGCAGTTCTGCAG...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAACCTTCAACTCCTTGTaGAGCCACTGGCACAGGATC +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVTFNSL*SHWHRI
Trigger: GATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGT...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGATTGATATAACAGCTTaGTTGCCACCCCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEIDITA*LPPQAF
Trigger: AAAAGCCTGGGGTGGCAACAAAGCTGTTATATCAAT...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCTCTTCTCGTCTGTGGTCTTACTCTAATCAGTAGACCTAGGTGTGATGACTCCCAGATTGAAATCAGTTaGACGTGGTATCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: PLLVCGLTLISRPRCDDSQIEIS*TWYHVS
Trigger: AGACACATGATACCACGTCAAACTGATTTCAATCTG...GGAGTCATCACACCTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCCGTCTTTTCTCCCTTaGCTCTCGTGCAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIPSFLP*LSCKSI
Trigger: GATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACGG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGCAATCTTGGCTTGTTTaGCCAAAGCCGCTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGQSWLV*PKPLLD
Trigger: ATCGAGAAGCGGCTTTGGCAAAACAAGCCAAGATTG...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCTTTTCATAACGAGCTaGAGCTCTTTCCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISELFITS*SSFHSN
Trigger: ATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAACGGAATCAGATTATTaGTCAACATTCGATAGTCTG +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGITESDY*STFDSL
Trigger: CAGACTATCGAATGTTGACAAATAATCTGATTCCGT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTGCTTGGATAGCTTCTaGGACAAGAGTGTCAATAGA +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISECLDSF*DKSVNR
Trigger: TCTATTGACACTCTTGTCCAAGAAGCTATCCAAGCA...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATACTTGGTTTAAAGTCATaGGAAAACCATCTAGGATAC +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGILGLKS*ENHLGY
Trigger: GTATCCTAGATGGTTTTCCAATGACTTTAAACCAAG...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGGGAGAACCTTTTCTTTaGAGTGCGGTCTCACCTTTC +
Preference number: 5 (lower is better)
Translates to: RLRVKLVSERDVVLQYERGEPFL*SAVSPF
Trigger: GAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTCC...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGAGGGAGTTATCCATCTaGCCCTTCAGTACTGATTTT +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVRELSI*PFSTDF
Trigger: AAAATCAGTACTGAAGGGCAAGATGGATAACTCCCT...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCAATTACTAGGAAAGTaGTTTGTGCCAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVQLLGK*FVPRFR
Trigger: CCTGAACCTTGGCACAAACAACTTTCCTAGTAATTG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGAATGGAAGCTTTGACTaGTTGGAAGACATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: FSMCGPDLLGGYVISELQNGSFD*LEDMSS
Trigger: GGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATT...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGGTGGTGCCCAACCTTTaGCACACACTATCATTTCCA +
Preference number: 5 (lower is better)
Translates to: RLRVKLVSERDVVLQYERVVPNL*HTLSFP
Trigger: TGGAAATGATAGTGTGTGCAAAAGGTTGGGCACCAC...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GCAATAGCATGGCATGATCTGAATAAGTTCTCTACTCTCCCGAGGGTTACTTTGTCACTGGAGAGCTACTaGTTGCTTCCATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: AIAWHDLNKFSTLPRVTLSLESY*LLPLMR
Trigger: CCTCATTAATGGAAGCAACAAGTAGCTCTCCAGTGA...CAAAGTAACCCTCGGGAGAGTAGAGAACTTATTCAGATCATGCCATGCTATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATATCCAAATAAAATCTTaGAGGGGACGTCCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNIQIKS*RGRPVL
Trigger: CAAGACCGGACGTCCCCTCAAAGATTTTATTTGGAT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AACTTGCAGGAAGGGTCAACACTAGGTCGACTAGTGTCAGGATATTTGGATACTTTTAACAATGTCAGCTaGGAGAAGGGACTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: NLQEGSTLGRLVSGYLDTFNNVS*EKGLQK
Trigger: CTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAA...AGTATCCAAATATCCTGACACTAGTCGACCTAGTGTTGACCCTTCCTGCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTTTAACAATGTCAGCTaGGAGAAGGGACTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNFNNVS*EKGLQK
Trigger: CTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TTCTCTATCTTTAGGTGGCTGGCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCTTTTGGCCCTAGTCTaGTTTGATACATTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: FSIFRWLANLLESCASLPLLALV*FDTFGA
Trigger: TGCTCCAAATGTATCAAACAAGACTAGGGCCAAAAG...GGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp TTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTTGTTTGTGCCAAGGTTCCACCATGCGTTCTTTaGGCCCTAGTCTTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: FRLGKVHPITRKVVCAKVPPCVL*ALVLFD
Trigger: ATCAAACAAGACTAGGGCCAAAAGAACGCATGGTGG...AACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp AAGGATGCTTCAAGAGAACAGCGACTTCAATTGGCTCCAGGTTCTTGGCACCTATCACTAAGTTTCACATaGGCAGCTTCTAATACTGGT +
Preference number: 5 (lower is better)
Translates to: KDASREQRLQLAPGSWHLSLSFT*AASNTG
Trigger: ACCAGTATTAGAAGCTGCCAATGTGAAACTTAGTGA...TAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp GCAGCATCTGTGTGTAGTCAAGCTGGGGTGGATCCTTCTCATAGTCAGCAAATATCACTAAGTTTCACATaGGCAGCTTCTAATACTGGT +
Preference number: 5 (lower is better)
Translates to: AASVCSQAGVDPSHSQQISLSFT*AASNTG
Trigger: ACCAGTATTAGAAGCTGCCAATGTGAAACTTAGTGA...TATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp GCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGTCACCCTTAGGAATAATTGATGGCTTCTTTTaGGAAGATAATGGTCAAGCT +
Preference number: 5 (lower is better)
Translates to: ARPKGTQTVIIVWSPLGIIDGFF*EDNGQA
Trigger: AGCTTGACCATTATCTTCCAAAAAGAAGCCATCAAT...TATTCCTAAGGGTGACCAGACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS CCA 90 bp TGTCATGTGCCTCCCTTTCCTTACAGAAAAACGATAGATTTAGACTaGATCAAAGATTTCACACTGATGACTGTCATCTGGAGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: CHVPPFPYRKTIDLD*IKDFTLMTVIWRSL
Trigger: GAGGCTCCTCCAGATGACAGTCATCAGTGTGAAATCTTTGATCCAGTCTAAATCTATCGTTTTTCTGTAAGGAAAGGGAGGCACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCAGATTGAAATCAGTTaGACGTGGTATCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVQIEIS*TWYHVS
Trigger: AGACACATGATACCACGTCAAACTGATTTCAATCTG...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGTTAACAAATCGGTGGTaGTCTGGCCTGCTGTATCTA +
Preference number: 5 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGLTNRW*SGLLYL
Trigger: TAGATACAGCAGGCCAGACAACCACCGATTTGTTAA...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTACCGTCTTTTCTCCCTTaGCTCTCGTGCAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLPSFLP*LSCKSI
Trigger: GATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACGG...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCCGTCTTTTCTCCCTTaGCTCTCGTGCAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVPSFLP*LSCKSI
Trigger: GATGCTTTTGCACGAGAGCAAAGGGAGAAAAGACGG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTGGCCCAGTATGCAATaGTTGGAGGGTGGTAAATTG +
Preference number: 5 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIWPSMQ*LEGGKL
Trigger: CAATTTACCACCCTCCAACAATTGCATACTGGGCCA...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGATTGTCATGAAATGCTaGGATAGCTTCTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVIVMKC*DSFLDK
Trigger: CTTGTCCAAGAAGCTATCCAAGCATTTCATGACAAT...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAGCAACTGTTCTGATTTaGCACCAAGCTGAGCACGTG +
Preference number: 5 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRATVLI*HQAEHV
Trigger: CACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGC...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCATTCATGCGACTCATaGAGGAAGTATCTGAAACAT +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISEHSCDS*RKYLKH
Trigger: ATGTTTCAGATACTTCCTCAATGAGTCGCATGAATG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTGTCTCCATCCTTATCTaGGTTTTCAGCAGCTACACG +
Preference number: 5 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIVSILI*VFSSYT
Trigger: CGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGAC...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGTGGCTGTGGCACTATaGCAACAGGTGATGTATCTG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVVAVAL*QQVMYL
Trigger: CAGATACATCACCTGTTGCAATAGTGCCACAGCCAC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGGAGTCAAACAGGGAGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGTCCACGAACTCGGAGTaGACTGTTAATAAAGATGTT +
Preference number: 5 (lower is better)
Translates to: RSQTGRLRVKLVSERDVVSTNSE*TVNKDV
Trigger: AACATCTTTATTAACAGTCAACTCCGAGTTCGTGGA...CACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp GTTACTAACAGGAACTTCCGCCAGTCCACGAACTCGGAGTTGACTGTTAATAAAAATGGAAGCTTTGACTaGTTGGAAGACATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: VTNRNFRQSTNSELTVNKNGSFD*LEDMSS
Trigger: GGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATT...TTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GTTTCTCACAGCAGAAATGTTTTCTTTCCCTCTGAGGCAGTTACCATGAAAGTGGCTTCACTTCCCCCTTaGAACACTTTGAGTAGTGTT +
Preference number: 5 (lower is better)
Translates to: VSHSRNVFFPSEAVTMKVASLPP*NTLSSV
Trigger: AACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC...CACTTTCATGGTAACTGCCTCAGAGGGAAAGAAAACATTTCTGCTGTGAGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp TTCAGGTTGGGTAAGGTGCATCCAATTACTAGGAAAGTTGTTTGTGCCAAGGTTGCTTCACTTCCCCCTTaGAACACTTTGAGTAGTGTT +
Preference number: 5 (lower is better)
Translates to: FRLGKVHPITRKVVCAKVASLPP*NTLSSV
Trigger: AACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC...AACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCACTCTCCATCACTTCCTaGTACATGTTCACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: ASLPPLNTLSSVSMDIFSLSITS*YMFTPL
Trigger: CAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG...TGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp GCAAATCTATTGGAGTCCTGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTTTTCCTCTGTATGTCTaGAAGGTGATCTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: ANLLESCASLPPLNTLSSFPLYV*KVISLH
Trigger: ATGGAGAGAGATCACCTTCAAGACATACAGAGGAAA...ACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCTCCCGAGGGTTACTTaGCTCATGGTCCTCATCATT +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVLPRVT*LMVLII
Trigger: AATGATGAGGACCATGAGCAAAGTAACCCTCGGGAG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCTGTACCCCAACAATTaGACAGTGCACCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVLYPNN*TVHLSC
Trigger: GCAGGAAAGGTGCACTGTCAAATTGTTGGGGTACAG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTTAACAATGTCAGCTaGGAGAAGGGACTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LKVISLHHFLVHVHSFGEFNNVS*EKGLQK
Trigger: CTTCTGGAGTCCCTTCTCCAAGCTGACATTGTTAAA...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp AACTTGCAGGAAGGGTCAACACTAGGTCGACTAGTGTCAGGATATTTGGATACTGGAGCATTTCCAGCATaGACTCTAAAGTGGCAAATA +
Preference number: 5 (lower is better)
Translates to: NLQEGSTLGRLVSGYLDTGAFPA*TLKWQI
Trigger: TATTTGCCACTTTAGAGTCAATGCTGGAAATGCTCC...AGTATCCAAATATCCTGACACTAGTCGACCTAGTGTTGACCCTTCCTGCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp TGTTCTGGAACACCGCTTTGTAAGATAGTTCAAGGTGATGTGCAAAGCAATATAAGCCCTCACCACATTTaGGCTGGCATCTCTGAAACA +
Preference number: 5 (lower is better)
Translates to: CSGTPLCKIVQGDVQSNISPHHI*AGISET
Trigger: TGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGCT...TATATTGCTTTGCACATCACCTTGAACTATCTTACAAAGCGGTGTTCCAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCAGCCCTCACCACATTTaGGCTGGCATCTCTGAAACA +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSPHHI*AGISET
Trigger: TGTTTCAGAGATGCCAGCCAAAATGTGGTGAGGGCT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTGTAGCCCACGTGGCTTaGGATGTAGTGTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCVAHVA*DVVCFS
Trigger: AGAGAAACACACTACATCCAAAGCCACGTGGGCTAC...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS TCA 90 bp GTCCCTCCCACAACATGTGGGAATTATGGGAGCTACAATTCAAGATaGGATTTGGATGGGGACACAGTCAAACCATATCAACACTTTATT +
Preference number: 5 (lower is better)
Translates to: VPPTTCGNYGSYNSR*DLDGDTVKPYQHFI
Trigger: AATAAAGTGTTGATATGGTTTGACTGTGTCCCCATCCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTTGTGGGAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS TCA 90 bp ATGTGCATTGAGAAATTCAGTCCTTTAGGTGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGCTGTTCAATGGTCAGGGTACCATCT +
Preference number: 5 (lower is better)
Translates to: MCIEKFSPLGAISKN*SRRLSSCSMVRVPS
Trigger: AGATGGTACCCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGGACTGAATTTCTCAATGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTCACTGGAAAATGCCTTaGCAAATGACTTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTHWKMP*QMTWDS
Trigger: TGAGTCCCAAGTCATTTGCAAAGGCATTTTCCAGTG...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTAGATATAACAGCTTTGTaGCCACCCCAGGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLDITAL*PPQAFL
Trigger: CAGAAAAGCCTGGGGTGGCAACAAAGCTGTTATATC...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAGATATAACAGCTTTGTaGCCACCCCAGGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRDITAL*PPQAFL
Trigger: CAGAAAAGCCTGGGGTGGCAACAAAGCTGTTATATC...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGATATAACAGCTTTGTaGCCACCCCAGGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVDITAL*PPQAFL
Trigger: CAGAAAAGCCTGGGGTGGCAACAAAGCTGTTATATC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCAGATTGAAATCAGTTaGACGTGGTATCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNQIEIS*TWYHVS
Trigger: AGACACATGATACCACGTCAAACTGATTTCAATCTG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTAAAGTCAATCTTGGCTaGTTTTGCCAAAGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCKVNLG*FCQSRF
Trigger: GAAGCGGCTTTGGCAAAACAAGCCAAGATTGACTTT...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTAAAGTCAATCTTGGCTaGTTTTGCCAAAGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTKVNLG*FCQSRF
Trigger: GAAGCGGCTTTGGCAAAACAAGCCAAGATTGACTTT...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp TTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGTTGCAGACGGAATCAGATTATTaGTCAACATTCGATAGTCTG +
Preference number: 5 (lower is better)
Translates to: FSMCGPDLLGGYVISELQTESDY*STFDSL
Trigger: CAGACTATCGAATGTTGACAAATAATCTGATTCCGT...CTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGTCACTCCTCATTCCATaGCTGTTGATCCACTCAAAA +
Preference number: 5 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGSLLIP*LLIHSK
Trigger: TTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGA...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTCCCAGTATGCAATTGTaGGAGGGTGGTAAATTGTCA +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTPSMQL*EGGKLS
Trigger: TGACAATTTACCACCCTCCAACAATTGCATACTGGG...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGGCCCAGTATGCAATaGTTGGAGGGTGGTAAATTG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVWPSMQ*LEGGKL
Trigger: CAATTTACCACCCTCCAACAATTGCATACTGGGCCA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCAAGGTAATTCAGGTGTaGTTGATTCCGCTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVKVIQV*LIPLEE
Trigger: CTCCTCGAGCGGAATCAACAACACCTGAATTACCTT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGCACATTTAGCATGTGTGGTCCAGACCTGCTTGGTGGTTATGTGATTTCTGAGCTTGGTTTAAAGTCATaGGAAAACCATCTAGGATAC +
Preference number: 5 (lower is better)
Translates to: CTFSMCGPDLLGGYVISELGLKS*ENHLGY
Trigger: GTATCCTAGATGGTTTTCCAATGACTTTAAACCAAG...CTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTCTGTGAGGTTTCTATaGCAGCCTGTAAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTSVRFL*QPVRAS
Trigger: AGAAGCTCTTACAGGCTGCAATAGAAACCTCACAGA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTTTCAGCAGCTACACGTaGACTGATATCTTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCFSSYT*TDIFVS
Trigger: GCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAA...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGATTCAGCAGCTACACGTaGACTGATATCTTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRFSSYT*TDIFVS
Trigger: GCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAA...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTGTCTCCATCCTTATCTaGGTTTTCAGCAGCTACACG +
Preference number: 5 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCVSILI*VFSSYT
Trigger: CGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGAC...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGTCTCCATCCTTATCTaGGTTTTCAGCAGCTACACG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVVSILI*VFSSYT
Trigger: CGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGAC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATTCCAATAAAGGCCAGTaGTCCAAGAAGCCTATAATT +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNSNKGQ*SKKPII
Trigger: AATTATAGGCTTCTTGGACAACTGGCCTTTATTGGA...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGCTTGAAGGAGTCTCTTaGTATCTTGGAAACGGTTCA +
Preference number: 5 (lower is better)
Translates to: RLRVKLVSERDVVLQYERLEGVS*YLGNGS
Trigger: TGAACCGTTTCCAAGATACAAAGAGACTCCTTCAAG...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCGAGTAAATCTCTTGTaGTCCTCTACTGGGATTTTA +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNRVNLL*SSTGIL
Trigger: TAAAATCCCAGTAGAGGACAACAAGAGATTTACTCG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGAGCTGGCTTTCAGAATaGTCTTTACTATCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: RLRVKLVSERDVVLQYERSWLSE*SLLSSW
Trigger: CCAACTGGATAGTAAAGACAATTCTGAAAGCCAGCT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCAGTTCAAGTCGAAATaGCGTGGCTATTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNQFKSK*RGYFFK
Trigger: TTTGAAGAAATAGCCACGCAATTTCGACTTGAACTG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATGAAGAGCCAATGCTTTaGTCTTTATCAGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNEEPML*SLSVQV
Trigger: GACTTGAACTGATAAAGACAAAAGCATTGGCTCTTC...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGTCCTCATCATTAGTTaGGTGGTGGCTCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVVLIIS*VVALFT
Trigger: AGTGAACAGAGCCACCACCAAACTAATGATGAGGAC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATATCTCTGAAACAGCCTaGAAGTCTCTTGATAAGATG +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNISETA*KSLDKM
Trigger: CATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGAT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATAGGAAAAATAATGAATaGTATGCCAGGCCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNRKNNE*YARPKG
Trigger: TCCCTTAGGCCTGGCATACAATTCATTATTTTTCCT...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS CCA 90 bp CAGTTGGACCAAAGGGATTCGAGTAAATCTCTTGTTGTCCTCTACTaGGATTTTACTTTCCATTCCCCAGTAATAATCTTGAAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: QLDQRDSSKSLVVLY*DFTFHSPVIILKES
Trigger: AGACTCCTTCAAGATTATTACTGGGGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAGAGATTTACTCGAATCCCTTTGGTCCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS-3UTR CAA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTACACTGGAAAATGCCTTaGCAAATGACTTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLHWKMP*QMTWDS
Trigger: TGAGTCCCAAGTCATTTGCAAAGGCATTTTCCAGTG...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp CCATTGTGTAGCAGCATACAGCTCCACCAAAAGAGTGTGAAAGAACACAGGAATCTGTATAATAGCTGCTaGGATTTTGGCCATTATTTC +
Preference number: 5 (lower is better)
Translates to: PLCSSIQLHQKSVKEHRNLYNSC*DFGHYF
Trigger: GAAATAATGGCCAAAATCCAAGCAGCTATTATACAG...ATTCCTGTGTTCTTTCACACTCTTTTGGTGGAGCTGTATGCTGCTACACAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTCTTTTCATAACGAGCTaGAGCTCTTTCCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCLFITS*SSFHSN
Trigger: ATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAG...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCTGTGAGGTTTCTATaGCAGCCTGTAAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSVRFL*QPVRAS
Trigger: AGAAGCTCTTACAGGCTGCAATAGAAACCTCACAGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGATGTAGTTCAGCCTTaGTTTCCTCATCATCCCACA +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVDVVQP*FPHHPT
Trigger: TGTGGGATGATGAGGAAACAAAGGCTGAACTACATC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGTCCCCAGTAATAATCTaGAAGGAGTCTCTTTGTATC +
Preference number: 5 (lower is better)
Translates to: RLRVKLVSERDVVLQYERSPVII*KESLCI
Trigger: GATACAAAGAGACTCCTTCAAGATTATTACTGGGGA...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp AGACTTCGTGTTAAACTGGTATCTGAGAGGGATGTAGTGCTACAGTATGAAAGGATTCGAGTAAATCTCTaGTTGTCCTCTACTGGGATT +
Preference number: 5 (lower is better)
Translates to: RLRVKLVSERDVVLQYERIRVNL*LSSTGI
Trigger: AATCCCAGTAGAGGACAACAAGAGATTTACTCGAAT...CCTTTCATACTGTAGCACTACATCCCTCTCAGATACCAGTTTAACACGAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440995.6
CDS-3UTR CAA 90 bp TTGAAGGTGATCTCTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAACAGTTCAAGTCGAAATaGCGTGGCTATTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LKVISLHHFLVHVHSFGEQFKSK*RGYFFK
Trigger: TTTGAAGAAATAGCCACGCAATTTCGACTTGAACTG...TTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637061.1
CDS-3UTR CAA 90 bp TTACTAGGAAAGTTGTTTGTGCCAAGGTTCAGGGTCACCAAATCGATCAGAATGGAAGAGCCAATGCTTTaGTCTTTATCAGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: LLGKLFVPRFRVTKSIRMEEPML*SLSVQV
Trigger: GACTTGAACTGATAAAGACAAAAGCATTGGCTCTTC...CATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637061.1
CDS-3UTR CAA 90 bp ACACAGGACAGAATGCTAAGGACATTCATGACATCCAACAAGAAGTGGGCAAATTCCACGAACTCGGAGTaGACTGTTAATAAAGATGTT +
Preference number: 5 (lower is better)
Translates to: TQDRMLRTFMTSNKKWANSTNSE*TVNKDV
Trigger: AACATCTTTATTAACAGTCAACTCCGAGTTCGTGGA...ATTTGCCCACTTCTTGTTGGATGTCATGAATGTCCTTAGCATTCTGTCCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp TGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCCACGAACTCGGAGTaGACTGTTAATAAAGATGTT +
Preference number: 5 (lower is better)
Translates to: CASLPPLNTLSSVSMDIFSTNSE*TVNKDV
Trigger: AACATCTTTATTAACAGTCAACTCCGAGTTCGTGGA...AAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTTCATTGAATGGAAGCTTTGACTaGTTGGAAGACATGAGTTCC +
Preference number: 5 (lower is better)
Translates to: SLPPLNTLSSVSMDIFSLNGSFD*LEDMSS
Trigger: GGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATT...CAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp CAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATTCCTGTAATTCACCCCCTTTGAACACTTaGAGTAGTGTTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: QSTNSELTVNKDVNSCNSPPLNT*SSVSMD
Trigger: GTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGG...TGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTTACATGGCAAAGAAGTaGGGCTTTGTAACAACTACG +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTYMAKK*GFVTTT
Trigger: CGTAGTTGTTACAAAGCCCAACTTCTTTGCCATGTA...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCACTGGAGAGCTACTaGTTGCTTCCATTAATGAGG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSLESY*LLPLMR
Trigger: CCTCATTAATGGAAGCAACAAGTAGCTCTCCAGTGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTATTTTAATATCCTGTACCCCAACAATTaGACAGTGCACCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LSITSLYMFTPLENYFNILYPNN*TVHLSC
Trigger: GCAGGAAAGGTGCACTGTCAAATTGTTGGGGTACAG...GATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS-3UTR CAA 90 bp TGTGCTTCACTTCCCCCTTTGAACACTTTGAGTAGTGTTTCCATGGACATCTTTATCTCTGAAACAGCCTaGAAGTCTCTTGATAAGATG +
Preference number: 5 (lower is better)
Translates to: CASLPPLNTLSSVSMDIFISETA*KSLDKM
Trigger: CATCTTATCAAGAGACTTCAAGGCTGTTTCAGAGAT...AAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAATTGATATAACAGCTTaGTTGCCACCCCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVIDITA*LPPQAF
Trigger: AAAAGCCTGGGGTGGCAACAAAGCTGTTATATCAAT...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGAATTGATATAACAGCTTaGTTGCCACCCCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRIDITA*LPPQAF
Trigger: AAAAGCCTGGGGTGGCAACAAAGCTGTTATATCAAT...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCATTGATATAACAGCTTaGTTGCCACCCCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVIDITA*LPPQAF
Trigger: AAAAGCCTGGGGTGGCAACAAAGCTGTTATATCAAT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAAGCTATGATTGTTACACCTTTACTTCTAAGGGTGAGATGGAGTGGGATGGGCTGTATAATAGCTGCTaGGATTTTGGCCATTATTTC +
Preference number: 5 (lower is better)
Translates to: KSYDCYTFTSKGEMEWDGLYNSC*DFGHYF
Trigger: GAAATAATGGCCAAAATCCAAGCAGCTATTATACAG...CCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTCTTTTTCATCATTTTTaGGGCCTCGAGTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAILFHHF*GLECFQ
Trigger: TTGAAAGCACTCGAGGCCCAAAAAATGATGAAAAAG...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACAAGGTAATTCAGGTGTaGTTGATTCCGCTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: TQMDTDTLPISCITTIKHKVIQV*LIPLEE
Trigger: CTCCTCGAGCGGAATCAACAACACCTGAATTACCTT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGCTTGGATAGCTTCTaGGACAAGAGTGTCAATAGA +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVCLDSF*DKSVNR
Trigger: TCTATTGACACTCTTGTCCAAGAAGCTATCCAAGCA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTCATTCATGCGACTCATaGAGGAAGTATCTGAAACAT +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTHSCDS*RKYLKH
Trigger: ATGTTTCAGATACTTCCTCAATGAGTCGCATGAATG...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCAGGGAGTTATCCATCTaGCCCTTCAGTACTGATTTT +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVRELSI*PFSTDF
Trigger: AAAATCAGTACTGAAGGGCAAGATGGATAACTCCCT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CTGGTTCATAATGTGCAGTCAGGATGGATACCTCTTTTTCTCCAAATTCTTGATCAATTACTAGGAAAGTaGTTTGTGCCAAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LVHNVQSGWIPLFLQILDQLLGK*FVPRFR
Trigger: CCTGAACCTTGGCACAAACAACTTTCCTAGTAATTG...ATCAAGAATTTGGAGAAAAAGAGGTATCCATCCTGACTGCACATTATGAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000513078.1
CDS-3UTR CAA 90 bp ACACAGTATCAAAGATACTTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTATGGTTGCTGTTAATTaGTTCCCTTATTCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: TQYQRYLGRHGVTAQSAIMVAVN*FPYSGG
Trigger: TCCACCAGAATAAGGGAACAAATTAACAGCAACCAT...AATGGCTGACTGTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGGAGCATTTCCAGCATaGACTCTAAAGTGGCAAATA +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVGAFPA*TLKWQI
Trigger: TATTTGCCACTTTAGAGTCAATGCTGGAAATGCTCC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAGCTCTAGTCTGTGAAAAATTATTAAGTTaGGCACTTGAAACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PKVTQLVVGNFSNVALVCEKLLS*ALETLL
Trigger: CAGCAGGGTTTCAAGTGCCAAACTTAATAATTTTTC...ACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTGAAAAATTATTAAGTTaGGCACTTGAAACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTEKLLS*ALETLL
Trigger: CAGCAGGGTTTCAAGTGCCAAACTTAATAATTTTTC...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTACAGATTGAAATCAGTTaGACGTGGTATCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLQIEIS*TWYHVS
Trigger: AGACACATGATACCACGTCAAACTGATTTCAATCTG...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTACTTTTTCATCATTTTTaGGGCCTCGAGTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVLFHHF*GLECFQ
Trigger: TTGAAAGCACTCGAGGCCCAAAAAATGATGAAAAAG...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTTAACAAATCGGTGGTaGTCTGGCCTGCTGTATCTA +
Preference number: 5 (lower is better)
Translates to: TQMDTDTLPISCITTIKHLTNRW*SGLLYL
Trigger: TAGATACAGCAGGCCAGACAACCACCGATTTGTTAA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTATGTCTTAACAGAGGCTaGTTCATATATGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVCLNRG*FIYGFC
Trigger: GCAAAACCCATATATGAACAAGCCTCTGTTAAGACA...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGATGTCTTAACAGAGGCTaGTTCATATATGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRCLNRG*FIYGFC
Trigger: GCAAAACCCATATATGAACAAGCCTCTGTTAAGACA...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTGTCTTAACAGAGGCTaGTTCATATATGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVCLNRG*FIYGFC
Trigger: GCAAAACCCATATATGAACAAGCCTCTGTTAAGACA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CTCACTCCTCATTCCATTGCTGTTGATCCACTCAAAATTTCTATCCAAAAGCTATTGTCCCACAAACCTTaGTTGAGTATGTACTATCAG +
Preference number: 5 (lower is better)
Translates to: LTPHSIAVDPLKISIQKLLSHKP*LSMYYQ
Trigger: CTGATAGTACATACTCAACAAAGGTTTGTGGGACAA...TAGCTTTTGGATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTACATTTTATTCACCCTTaGTCCCACAAACCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVHFIHP*SHKPLL
Trigger: CAACAAAGGTTTGTGGGACAAAGGGTGAATAAAATG...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCATTGTCATGAAATGCTaGGATAGCTTCTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVIVMKC*DSFLDK
Trigger: CTTGTCCAAGAAGCTATCCAAGCATTTCATGACAAT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TGCCACTTAATGCTAGACTTATGGTCCATAGCGGTTAAGGATCTAGAACAAACTCTTGGTTTAAAGTCATaGGAAAACCATCTAGGATAC +
Preference number: 5 (lower is better)
Translates to: CHLMLDLWSIAVKDLEQTLGLKS*ENHLGY
Trigger: GTATCCTAGATGGTTTTCCAATGACTTTAAACCAAG...AGTTTGTTCTAGATCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTCATTCATGCGACTCATaGAGGAAGTATCTGAAACAT +
Preference number: 5 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCHSCDS*RKYLKH
Trigger: ATGTTTCAGATACTTCCTCAATGAGTCGCATGAATG...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCCATTCATGCGACTCATaGAGGAAGTATCTGAAACAT +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVHSCDS*RKYLKH
Trigger: ATGTTTCAGATACTTCCTCAATGAGTCGCATGAATG...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp GAAAACCATTGCTCCAATAAAGGCCAGTTGTCCAAGAAGCCTATAATTCTATGTTCCAATAAAGGCCAGTaGTCCAAGAAGCCTATAATT +
Preference number: 5 (lower is better)
Translates to: ENHCSNKGQLSKKPIILCSNKGQ*SKKPII
Trigger: AATTATAGGCTTCTTGGACAACTGGCCTTTATTGGA...ACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTCCCCAGTAATAATCTaGAAGGAGTCTCTTTGTATC +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVSPVII*KESLCI
Trigger: GATACAAAGAGACTCCTTCAAGATTATTACTGGGGA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCATCAAAATAACACCATaGTGTAGCAGCATACAGCTC +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVIKITP*CSSIQL
Trigger: GAGCTGTATGCTGCTACACAATGGTGTTATTTTGAT...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGAAAAATTATTAAGTTaGGCACTTGAAACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVEKLLS*ALETLL
Trigger: CAGCAGGGTTTCAAGTGCCAAACTTAATAATTTTTC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp TTAGGTAGACATGGTGTAACTGCACAGTCAGCCATTTATAAAGCTGAAACTAGACTGTATAATAGCTGCTaGGATTTTGGCCATTATTTC +
Preference number: 5 (lower is better)
Translates to: LGRHGVTAQSAIYKAETRLYNSC*DFGHYF
Trigger: GAAATAATGGCCAAAATCCAAGCAGCTATTATACAG...TCTAGTTTCAGCTTTATAAATGGCTGACTGTGCAGTTACACCATGTCTACCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACCTTTTCATAACGAGCTaGAGCTCTTTCCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: TQMDTDTLPISCITTIKHLFITS*SSFHSN
Trigger: ATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAG...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTAACGGAATCAGATTATTaGTCAACATTCGATAGTCTG +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVTESDY*STFDSL
Trigger: CAGACTATCGAATGTTGACAAATAATCTGATTCCGT...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp ATGAACTGGTCACCTAAGGTCACACAGTTAGTAGTTGGCAATTTCAGTAATGTACTCATTCCATTGCTGTaGATCCACTCAAAATTTCTA +
Preference number: 5 (lower is better)
Translates to: MNWSPKVTQLVVGNFSNVLIPLL*IHSKFL
Trigger: TAGAAATTTTGAGTGGATCAACAGCAATGGAATGAG...TACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282469.10
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCGATTTTGTTTTTGGTTaGGGTGTAACTGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVDFVFG*GVTVSR
Trigger: TCTGGAAACAGTTACACCCAAACCAAAAACAAAATC...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp CAGTCCACGAACTCGGAGTTGACTGTTAATAAAGATGTTAATTCCTGTAATTCACAGTTCAAGTCGAAATaGCGTGGCTATTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: QSTNSELTVNKDVNSCNSQFKSK*RGYFFK
Trigger: TTTGAAGAAATAGCCACGCAATTTCGACTTGAACTG...TGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637061.1
CDS-3UTR CAA 90 bp AAAAATAATGAATTGTATGCCAGGCCTAAGGGAACTCAGACCGTAATCATAGTCTTTTACTCTGTATGTTaGGAAGAAGCCAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: KNNELYARPKGTQTVIIVFYSVC*EEAKCL
Trigger: AAGGCATTTGGCTTCTTCCAAACATACAGAGTAAAA...GACTATGATTACGGTCTGAGTTCCCTTAGGCCTGGCATACAATTCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS-3UTR CAA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACATTGTCATGAAATGCTaGGATAGCTTCTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: TQMDTDTLPISCITTIKHIVMKC*DSFLDK
Trigger: CTTGTCCAAGAAGCTATCCAAGCATTTCATGACAAT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACTCCAATAAAGGCCAGTaGTCCAAGAAGCCTATAATT +
Preference number: 5 (lower is better)
Translates to: TQMDTDTLPISCITTIKHSNKGQ*SKKPII
Trigger: AATTATAGGCTTCTTGGACAACTGGCCTTTATTGGA...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS-3UTR CAA 90 bp CTCTCCATCACTTCCTTGTACATGTTCACTCCTTTGGAGAATTATTTTAATATCGAAGAGCCAATGCTTTaGTCTTTATCAGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: LSITSLYMFTPLENYFNIEEPML*SLSVQV
Trigger: GACTTGAACTGATAAAGACAAAAGCATTGGCTCTTC...GATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637061.1
CDS GCA 90 bp CTAGGGCAAATAGAGCCCTCTTTGAAAACTAATACATTGATGTTCTaGTCTGTTAAGTTAGAATCAGTGTGCTTGATTACTACAAATAAG +
Preference number: 5 (lower is better)
Translates to: LGQIEPSLKTNTLMF*SVKLESVCLITTNK
Trigger: CTTATTTGTAGTAATCAAGCACACTGATTCTAACTTAACAGAGCAGAACATCAATGTATTAGTTTTCAAAGAGGGCTCTATTTGCCCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504054.1
CDS CCA 90 bp TTGAAACCTGTATGTAATCCGCATCAGATTGAAATCAGTTTGACGTaGTATCATGTGTCTAAGTCTCTCTTGAAAAGTATCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: LKPVCNPHQIEISLT*YHVSKSLLKSITFH
Trigger: ATGAAAAGTGATACTTTTCAAGAGAGACTTAGACACATGATACCACGTCAAACTGATTTCAATCTGATGCGGATTACATACAGGTTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS-3UTR CAA 90 bp ACACAAATGGATACTGACACTCTACCAATATCATGCATTACAACAATTAAGCACACGGAATCAGATTATTaGTCAACATTCGATAGTCTG +
Preference number: 5 (lower is better)
Translates to: TQMDTDTLPISCITTIKHTESDY*STFDSL
Trigger: CAGACTATCGAATGTTGACAAATAATCTGATTCCGT...GTGCTTAATTGTTGTAATGCATGATATTGGTAGAGTGTCAGTATCCATTTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509059.5
CDS GCA 72 bp ATGAGCTGCACGGCAATCCTGCGCTCCTGCTGGGACTaGCGCATCAGCCGGTTAATCAGCTGTTCCTCCCGA +
Preference number: 6 (lower is better)
Translates to: MSCTAILRSCWD*RISRLISCSSR
Trigger: TCGGGAGGAACAGCTGATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS CAA 72 bp GCCAGCCCGCGTCCTCCTGTAGCCAAGGGCAACCCTTaGCTATGGAAGCGTATCCAGGCTGGAACTAGGCGA +
Preference number: 6 (lower is better)
Translates to: ASPRPPVAKGNP*LWKRIQAGTRR
Trigger: TCGCCTAGTTCCAGCCTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGGCTACAGGAGGACGCGGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000509059.5
ENST00000637569.1
CDS GCA 72 bp CGAACATGCATGAGCTGCACGGCAATCCTGCGCTCCTaGTGGGACTGCCGCATCAGCCGGTTAATCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RTCMSCTAILRS*WDCRISRLISC
Trigger: ACAGCTGATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGCTCATGCATGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS CCA 72 bp CCGCGTCCTCCTGTAGCCAAGGGCAACCCTTTGCTATaGAAGCGTATCCAGGCTGGAACTAGGCGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: PRPPVAKGNPLL*KRIQAGTRRKA
Trigger: GGCCTTTCGCCTAGTTCCAGCCTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGGCTACAGGAGGACGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282469.10
ENST00000509059.5
ENST00000637569.1
CDS CCA 72 bp ACGGTCCGGGACACCTTCAACTCCTTGTTGAGCCACTaGCACAGGATCTCCGACATGGTTCAGCCGGTGCCT +
Preference number: 6 (lower is better)
Translates to: TVRDTFNSLLSH*HRISDMVQPVP
Trigger: AGGCACCGGCTGAACCATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTCCCGGACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CCA 72 bp ACATGCATGAGCTGCACGGCAATCCTGCGCTCCTGCTaGGACTGCCGCATCAGCCGGTTAATCAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: TCMSCTAILRSC*DCRISRLISCS
Trigger: GGAACAGCTGATTAACCGGCTGATGCGGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGCTCATGCATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS CAA 90 bp ACCAAGCCTGCCAGCCCGCGTCCTCCTGTAGCCAAGGGCAACCCTTaGCTATGGAAGCGTATCCAGGCTGGAACTAGGCGAAAGGCCTTA +
Preference number: 6 (lower is better)
Translates to: TKPASPRPPVAKGNP*LWKRIQAGTRRKAL
Trigger: TAAGGCCTTTCGCCTAGTTCCAGCCTGGATACGCTTCCATAGCAAAGGGTTGCCCTTGGCTACAGGAGGACGCGGGCTGGCAGGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282469.10
ENST00000509059.5
ENST00000637569.1
CDS CAA 90 bp GCAAATGACTTGGGACTCACGGTCCGGGACACCTTCAACTCCTTGTaGAGCCACTGGCACAGGATCTCCGACATGGTTCAGCCGGTGCCT +
Preference number: 6 (lower is better)
Translates to: ANDLGLTVRDTFNSL*SHWHRISDMVQPVP
Trigger: AGGCACCGGCTGAACCATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTCCCGGACCGTGAGTCCCAAGTCATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CAA 90 bp TTCTTCAGGTTCCTCCATAGACCCCGAGCACTGCAGAACTGCATGTaGCACCCAACCCTAGTGGCTAGGCTCCCACTCAGCCCAGGATCC +
Preference number: 6 (lower is better)
Translates to: FFRFLHRPRALQNCM*HPTLVARLPLSPGS
Trigger: GGATCCTGGGCTGAGTGGGAGCCTAGCCACTAGGGTTGGGTGCAACATGCAGTTCTGCAGTGCTCGGGGTCTATGGAGGAACCTGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS TCA 72 bp TGGGACTCACGGTCCGGGACACCTTCAACTCCTTGTTaGGCCACTGGCACAGGATCTCCGACATGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: WDSRSGTPSTPC*ATGTGSPTWFS
Trigger: GCTGAACCATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTCCCGGACCGTGAGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CAA 72 bp TTCCTCCATAGACCCCGAGCACTGCAGAACTGCATGTaGCACCCAACCCTAGTGGCTAGGCTCCCACTCAGC +
Preference number: 6 (lower is better)
Translates to: FLHRPRALQNCM*HPTLVARLPLS
Trigger: GCTGAGTGGGAGCCTAGCCACTAGGGTTGGGTGCAACATGCAGTTCTGCAGTGCTCGGGGTCTATGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS GCA 72 bp TTCAGGTTCCTCCATAGACCCCGAGCACTGCAGAACTaGATGTTGCACCCAACCCTAGTGGCTAGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: FRFLHRPRALQN*MLHPTLVARLP
Trigger: TGGGAGCCTAGCCACTAGGGTTGGGTGCAACATGCAGTTCTGCAGTGCTCGGGGTCTATGGAGGAACCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS CAA 72 bp TTGGGACTCACGGTCCGGGACACCTTCAACTCCTTGTaGAGCCACTGGCACAGGATCTCCGACATGGTTCAG +
Preference number: 6 (lower is better)
Translates to: LGLTVRDTFNSL*SHWHRISDMVQ
Trigger: CTGAACCATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTCCCGGACCGTGAGTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CAA 72 bp GACTTGGGACTCACGGTCCGGGACACCTTCAACTCCTaGTTGAGCCACTGGCACAGGATCTCCGACATGGTT +
Preference number: 6 (lower is better)
Translates to: DLGLTVRDTFNS*LSHWHRISDMV
Trigger: AACCATGTCGGAGATCCTGTGCCAGTGGCTCAACAAGGAGTTGAAGGTGTCCCGGACCGTGAGTCCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS TCA 72 bp GGGGGAGGTGAGGGCTACCTTTGTTCAGCTGTAGTTTaGGGACATGAGATGATGGGGAGTCAGGAGACCTGG +
Preference number: 6 (lower is better)
Translates to: GGGEGYLCSAVV*GHEMMGSQETW
Trigger: CCAGGTCTCCTGACTCCCCATCATCTCATGTCCTCAAACTACAGCTGAACAAAGGTAGCCCTCACCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS GCA 72 bp CATAAAACTTCCTTTTCATGCCGAACATGCATGAGCTaGACGGCAATCCTGCGCTCCTGCTGGGACTGCCGC +
Preference number: 6 (lower is better)
Translates to: HKTSFSCRTCMS*TAILRSCWDCR
Trigger: GCGGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGCTCATGCATGTTCGGCATGAAAAGGAAGTTTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000503074.1
ENST00000509059.5
ENST00000637569.1
CDS TCA 72 bp CACAGTCACAGAAGCCACTTCAGAGGAAGGGGGAGGTaGGGGCTACCTTTGTTCAGCTGTAGTTTGAGGACA +
Preference number: 6 (lower is better)
Translates to: HSHRSHFRGRGR*GLPLFSCSLRT
Trigger: TGTCCTCAAACTACAGCTGAACAAAGGTAGCCCTCACCTCCCCCTTCCTCTGAAGTGGCTTCTGTGACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS GCA 72 bp TGTAACCAGCTCTCATTAATGATGTCAAGCCGCTCCTaGTCCGCCTCTTCCTTCCGGGCATCACAAATGTCC +
Preference number: 6 (lower is better)
Translates to: CNQLSLMMSSRS*SASSFRASQMS
Trigger: GGACATTTGTGATGCCCGGAAGGAAGAGGCGGAGCAGGAGCGGCTTGACATCATTAATGAGAGCTGGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CCA 72 bp TCACGGCAGAAGGCAAGGAGGAGAAAGTCACATGGATaGCAGCAGGCAAATCGAGAGCTTGTGCAGAGAAAC +
Preference number: 6 (lower is better)
Translates to: SRQKARRRKSHG*QQANRELVQRN
Trigger: GTTTCTCTGCACAAGCTCTCGATTTGCCTGCTGCCATCCATGTGACTTTCTCCTCCTTGCCTTCTGCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 72 bp GCCCAGCCCTGGCAGGACTTTGTAGCCCACGTGGCTTaGGATGTAGTGTGTTTCTCTGTGAAGATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: AQPWQDFVAHVA*DVVCFSVKMFF
Trigger: GAAGAACATCTTCACAGAGAAACACACTACATCCAAAGCCACGTGGGCTACAAAGTCCTGCCAGGGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS CAA 90 bp TTCAGCTCAGCCCAGCCCTGGCAGGACTTTGTAGCCCACGTGGCTTaGGATGTAGTGTGTTTCTCTGTGAAGATGTTCTTCAGGTTCCTC +
Preference number: 6 (lower is better)
Translates to: FSSAQPWQDFVAHVA*DVVCFSVKMFFRFL
Trigger: GAGGAACCTGAAGAACATCTTCACAGAGAAACACACTACATCCAAAGCCACGTGGGCTACAAAGTCCTGCCAGGGCTGGGCTGAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508817.1
CDS CCA 72 bp TTTGGCTGGGGCTATACCACTAGCCAGACATGTAACTaGAGCACCTCACTGAACTGTCATGTGCCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: FGWGYTTSQTCN*STSLNCHVPPF
Trigger: AAAGGGAGGCACATGACAGTTCAGTGAGGTGCTCCAGTTACATGTCTGGCTAGTGGTATAGCCCCAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 90 bp GCCTGCTGCCAGGTGTCCATGACCAACTTTTCATCGGCCTCAAAGTaGGACTCAACGTTTTCTAGGGAGTTATCCATCTTGCCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: ACCQVSMTNFSSASK*DSTFSRELSILPFS
Trigger: ACTGAAGGGCAAGATGGATAACTCCCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATGAAAAGTTGGTCATGGACACCTGGCAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CCA 72 bp CTCCCACCAGGTCCCTCCCACAACATGTGGGAATTATaGGAGCTACAATTCAAGATGAGATTTGGATGGGGA +
Preference number: 6 (lower is better)
Translates to: LPPGPSHNMWEL*ELQFKMRFGWG
Trigger: TCCCCATCCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTTGTGGGAGGGACCTGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CCA 72 bp GTTATTCTTGCATATGGGTTAATTCTCCAGCTTGGGTaGGAGGAGGTGGTTCCTCACACAGAGAAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: VILAYGLILQLG*EEVVPHTEKAS
Trigger: GGAGGCTTTCTCTGTGTGAGGAACCACCTCCTCCCACCCAAGCTGGAGAATTAACCCATATGCAAGAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635995.1
CDS TCA 72 bp AATGGTCAAGCTTCTGCGGCCTTTTCTGCTTTTCGGTaGCTCTATTCACACCATCCGAAGGATTCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: NGQASAAFSAFR*LYSHHPKDSCL
Trigger: AAGGCAGGAATCCTTCGGATGGTGTGAATAGAGTCACCGAAAAGCAGAAAAGGCCGCAGAAGCTTGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS CAA 72 bp CAGGTCATCAGGAAGGGAGTTGAAATCAGCCTGCCATaGAGCTACAAAATCTTGCTTGTGATCCGGACGCTT +
Preference number: 6 (lower is better)
Translates to: QVIRKGVEISLP*SYKILLVIRTL
Trigger: AAGCGTCCGGATCACAAGCAAGATTTTGTAGCTCAATGGCAGGCTGATTTCAACTCCCTTCCTGATGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 72 bp CTCGCAGATCATTCACTCGTTGATGTAGTTCAGCCTTaGTTTCCTCATCATCCCACAGGTCATCAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: LADHSLVDVVQP*FPHHPTGHQEG
Trigger: CCCTTCCTGATGACCTGTGGGATGATGAGGAAACAAAGGCTGAACTACATCAACGAGTGAATGATCTGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 72 bp TTAGTTTGGTGGTGGCTCTGTTCACTGGAGAGCTACTaGTTGCTTCCATTAATGAGGCCTTGGCATGAGCCT +
Preference number: 6 (lower is better)
Translates to: LVWWWLCSLESY*LLPLMRPWHEP
Trigger: AGGCTCATGCCAAGGCCTCATTAATGGAAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACCACCAAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637569.1
CDS CAA 90 bp ATGCATTTTAAAAACGCAGCACAGAGCTTAGCAAGTACTGGATACTaGTACTGCCAACCTGGAGAGCTCTTCCTATCCCACCCAAGCCTG +
Preference number: 6 (lower is better)
Translates to: MHFKNAAQSLASTGY*YCQPGELFLSHPSL
Trigger: CAGGCTTGGGTGGGATAGGAAGAGCTCTCCAGGTTGGCAGTACAAGTATCCAGTACTTGCTAAGCTCTGTGCTGCGTTTTTAAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 90 bp TCTACTCTCCCGAGGGTTACTTTGCTCATGGTCCTCATCATTAGTTaGGTGGTGGCTCTGTTCACTGGAGAGCTACTTGTTGCTTCCATT +
Preference number: 6 (lower is better)
Translates to: STLPRVTLLMVLIIS*VVALFTGELLVASI
Trigger: AATGGAAGCAACAAGTAGCTCTCCAGTGAACAGAGCCACCACCAAACTAATGATGAGGACCATGAGCAAAGTAACCCTCGGGAGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506526.5
ENST00000637569.1
CDS CAA 90 bp CACACAGAGAAAGCCTCCTCTTCTACTCGCCTGGAGTTCATGCAGTaGGAGAAAGAAAAGCAGAGCAGTCTCCTAAACATTTCCCAAACA +
Preference number: 6 (lower is better)
Translates to: HTEKASSSTRLEFMQ*EKEKQSSLLNISQT
Trigger: TGTTTGGGAAATGTTTAGGAGACTGCTCTGCTTTTCTTTCTCCAACTGCATGAACTCCAGGCGAGTAGAAGAGGAGGCTTTCTCTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635995.1
CDS CCA 72 bp AACTGTTATTCTTGCATATGGGTTAATTCTCCAGCTTaGGTGGGAGGAGGTGGTTCCTCACACAGAGAAAGC +
Preference number: 6 (lower is better)
Translates to: NCYSCIWVNSPA*VGGGGSSHRES
Trigger: GCTTTCTCTGTGTGAGGAACCACCTCCTCCCACCCAAGCTGGAGAATTAACCCATATGCAAGAATAACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635995.1
CDS CAA 72 bp CATTTCCCAAACATCATGCTCCTATCCTCACGCTTCTaGTCTACAGAGTTTCCAGCAGCTGTTCCCCTAACT +
Preference number: 6 (lower is better)
Translates to: HFPNIMLLSSRF*STEFPAAVPLT
Trigger: AGTTAGGGGAACAGCTGCTGGAAACTCTGTAGACAAGAAGCGTGAGGATAGGAGCATGATGTTTGGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635995.1
CDS TCA 72 bp ATACCACTAGCCAGACATGTAACTGGAGCACCTCACTaGACTGTCATGTGCCTCCCTTTCCTTACAGAAAAA +
Preference number: 6 (lower is better)
Translates to: IPLARHVTGAPH*TVMCLPFLTEK
Trigger: TTTTTCTGTAAGGAAAGGGAGGCACATGACAGTTCAGTGAGGTGCTCCAGTTACATGTCTGGCTAGTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS TCA 72 bp GAAGGATTCCTGCCTTTAGGTGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGCTGTTCAATGGTCAGG +
Preference number: 6 (lower is better)
Translates to: EGFLPLGAISKN*SRRLSSCSMVR
Trigger: CCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGGCAGGAATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637569.1
CDS GCA 72 bp CACTGTTTCCACATCCCACATCTCACTACTCAGTTCTaGTTCCTTACCTACTCTAAGTTGTCTGCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: HCFHIPHLTTQF*FLTYSKLSAAL
Trigger: AAGAGCTGCAGACAACTTAGAGTAGGTAAGGAAGCAGAACTGAGTAGTGAGATGTGGGATGTGGAAACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CCA 72 bp AGAAAGAGATTTAATTGGTCTTACAGTTTCACATGGTaGGGGAAGCCTCACAATCACGGCAGAAGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: RKRFNWSYSFTW*GKPHNHGRRQG
Trigger: TCCTTGCCTTCTGCCGTGATTGTGAGGCTTCCCCCACCATGTGAAACTGTAAGACCAATTAAATCTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 72 bp CAGGTGTCCATGACCAACTTTTCATCGGCCTCAAAGTaGGACTCAACGTTTTCTAGGGAGTTATCCATCTTG +
Preference number: 6 (lower is better)
Translates to: QVSMTNFSSASK*DSTFSRELSIL
Trigger: CAAGATGGATAACTCCCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATGAAAAGTTGGTCATGGACACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS TCA 72 bp TTCTCAGAGCACTCTTTAGGTGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGCTGTTCAATGGTCAGG +
Preference number: 6 (lower is better)
Translates to: FSEHSLGAISKN*SRRLSSCSMVR
Trigger: CCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGAGTGCTCTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513078.1
CDS GCA 72 bp AGTCACATGGATGGCAGCAGGCAAATCGAGAGCTTGTaGAGAGAAACTCCCGTTTTTAAAAACATCACATCT +
Preference number: 6 (lower is better)
Translates to: SHMDGSRQIESL*RETPVFKNITS
Trigger: AGATGTGATGTTTTTAAAAACGGGAGTTTCTCTGCACAAGCTCTCGATTTGCCTGCTGCCATCCATGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CCA 72 bp CTAAGAACTGATCTCGAAGACTGTCAAGCTGTTCAATaGTCAGGGTACCATCTTCTTCCTTTTCTACAGGTG +
Preference number: 6 (lower is better)
Translates to: LRTDLEDCQAVQ*SGYHLLPFLQV
Trigger: CACCTGTAGAAAAGGAAGAAGATGGTACCCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000506526.5
ENST00000513078.1
ENST00000637061.1
ENST00000637569.1
CDS CCA 72 bp TTCAATCATCTCCCACCAGGTCCCTCCCACAACATGTaGGAATTATGGGAGCTACAATTCAAGATGAGATTT +
Preference number: 6 (lower is better)
Translates to: FNHLPPGPSHNM*ELWELQFKMRF
Trigger: AAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTTGTGGGAGGGACCTGGTGGGAGATGATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 72 bp TCCCCAGTAATAATCTTGAAGGAGTCTCTTTGTATCTaGGAAACGGTTCAGCTCTGCCTGCATCAGGGAAAA +
Preference number: 6 (lower is better)
Translates to: SPVIILKESLCI*ETVQLCLHQGK
Trigger: TTTTCCCTGATGCAGGCAGAGCTGAACCGTTTCCAAGATACAAAGAGACTCCTTCAAGATTATTACTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 72 bp AATGGAATCCCCTTTCCAAAGGTTTCTGAGTCTACTTaGGGGCCTGCATGTGATCCTTCCAATAGTGTAACA +
Preference number: 6 (lower is better)
Translates to: NGIPFPKVSEST*GPACDPSNSVT
Trigger: TGTTACACTATTGGAAGGATCACATGCAGGCCCCAAAGTAGACTCAGAAACCTTTGGAAAGGGGATTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 72 bp GAAAGTCACATGGATGGCAGCAGGCAAATCGAGAGCTaGTGCAGAGAAACTCCCGTTTTTAAAAACATCACA +
Preference number: 6 (lower is better)
Translates to: ESHMDGSRQIES*CRETPVFKNIT
Trigger: TGTGATGTTTTTAAAAACGGGAGTTTCTCTGCACAAGCTCTCGATTTGCCTGCTGCCATCCATGTGACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 90 bp GTTGTCCTCTACTGGGATTTTACTTTCCATTCCCCAGTAATAATCTaGAAGGAGTCTCTTTGTATCTTGGAAACGGTTCAGCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: VVLYWDFTFHSPVII*KESLCILETVQLCL
Trigger: CAGGCAGAGCTGAACCGTTTCCAAGATACAAAGAGACTCCTTCAAGATTATTACTGGGGAATGGAAAGTAAAATCCCAGTAGAGGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 90 bp TCTCCTAAACATTTCCCAAACATCATGCTCCTATCCTCACGCTTCTaGTCTACAGAGTTTCCAGCAGCTGTTCCCCTAACTGTAAACATT +
Preference number: 6 (lower is better)
Translates to: SPKHFPNIMLLSSRF*STEFPAAVPLTVNI
Trigger: AATGTTTACAGTTAGGGGAACAGCTGCTGGAAACTCTGTAGACAAGAAGCGTGAGGATAGGAGCATGATGTTTGGGAAATGTTTAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635995.1
CDS TCA 72 bp ATCAGGAATGCTCTTTCCTTTCTTCAGCAACTGTTCTaGTTTTGCACCAAGCTGAGCACGTGTAGTGAGTTT +
Preference number: 6 (lower is better)
Translates to: IRNALSFLQQLF*FCTKLSTCSEF
Trigger: AAACTCACTACACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAGAAAGGAAAGAGCATTCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000503074.1
ENST00000504054.1
ENST00000509059.5
ENST00000637569.1
CDS TCA 72 bp GAGAAATTCAGTCCTTTAGGTGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGCTGTTCAATGGTCAGG +
Preference number: 6 (lower is better)
Translates to: EKFSPLGAISKN*SRRLSSCSMVR
Trigger: CCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGGACTGAATTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506526.5
CDS CAA 72 bp CTATCCAGTTGGACCAAAGGGATTCGAGTAAATCTCTaGTTGTCCTCTACTGGGATTTTACTTTCCATTCCC +
Preference number: 6 (lower is better)
Translates to: LSSWTKGIRVNL*LSSTGILLSIP
Trigger: GGGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAGAGATTTACTCGAATCCCTTTGGTCCAACTGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 90 bp ATATTAAACAATGGAATCCCCTTTCCAAAGGTTTCTGAGTCTACTTaGGGGCCTGCATGTGATCCTTCCAATAGTGTAACAAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: ILNNGIPFPKVSEST*GPACDPSNSVTRKE
Trigger: CTCCTTCCTTGTTACACTATTGGAAGGATCACATGCAGGCCCCAAAGTAGACTCAGAAACCTTTGGAAAGGGGATTCCATTGTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS TCA 72 bp TTTCCTATTATGCCTTTAGGTGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGCTGTTCAATGGTCAGG +
Preference number: 6 (lower is better)
Translates to: FPIMPLGAISKN*SRRLSSCSMVR
Trigger: CCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGGCATAATAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356031.8
ENST00000440995.6
CDS TCA 72 bp GTACATAGCTATTCTTTAGGTGCCATATCTAAGAACTaGTCTCGAAGACTGTCAAGCTGTTCAATGGTCAGG +
Preference number: 6 (lower is better)
Translates to: VHSYSLGAISKN*SRRLSSCSMVR
Trigger: CCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGAATAGCTATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637061.1
CDS CCA 72 bp TGTACTCGTCATCTGAGTAAGTATTTAACAAATCGGTaGTTGTCTGGCCTGCTGTATCTAAAGAAGTCTTGG +
Preference number: 6 (lower is better)
Translates to: CTRHLSKYLTNR*LSGLLYLKKSW
Trigger: CCAAGACTTCTTTAGATACAGCAGGCCAGACAACCACCGATTTGTTAAATACTTACTCAGATGACGAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000502454.1
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CCA 72 bp AAATCTCAGTTAGATTATAGGACGCTGAAGTGCAATTaGGTTTTTGCACTCAGCACAGTGTCCTCTTTAGAG +
Preference number: 6 (lower is better)
Translates to: KSQLDYRTLKCN*VFALSTVSSLE
Trigger: CTCTAAAGAGGACACTGTGCTGAGTGCAAAAACCCAATTGCACTTCAGCGTCCTATAATCTAACTGAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 72 bp ACTCGTCATCTGAGTAAGTATTTAACAAATCGGTGGTaGTCTGGCCTGCTGTATCTAAAGAAGTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: TRHLSKYLTNRW*SGLLYLKKSWM
Trigger: CATCCAAGACTTCTTTAGATACAGCAGGCCAGACAACCACCGATTTGTTAAATACTTACTCAGATGACGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000502454.1
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CAA 90 bp AGGGAGTTATCCATCTTGCCCTTCAGTACTGATTTTGTTTTTGGTTaGGGTGTAACTGTTTCCAGAGAAATGGATATTCGAGGAACTAGA +
Preference number: 6 (lower is better)
Translates to: RELSILPFSTDFVFG*GVTVSREMDIRGTR
Trigger: TCTAGTTCCTCGAATATCCATTTCTCTGGAAACAGTTACACCCAAACCAAAAACAAAATCAGTACTGAAGGGCAAGATGGATAACTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 90 bp ACCACGGACCTAGGGCAAATAGAGCCCTCTTTGAAAACTAATACATaGATGTTCTGCTCTGTTAAGTTAGAATCAGTGTGCTTGATTACT +
Preference number: 6 (lower is better)
Translates to: TTDLGQIEPSLKTNT*MFCSVKLESVCLIT
Trigger: AGTAATCAAGCACACTGATTCTAACTTAACAGAGCAGAACATCAATGTATTAGTTTTCAAAGAGGGCTCTATTTGCCCTAGGTCCGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504054.1
CDS TCA 72 bp CCTTTCTTCAGCAACTGTTCTGATTTTGCACCAAGCTaGGCACGTGTAGTGAGTTTTAAGAAACTATCACTT +
Preference number: 6 (lower is better)
Translates to: PFFSNCSDFAPS*ARVVSFKKLSL
Trigger: AAGTGATAGTTTCTTAAAACTCACTACACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000503074.1
ENST00000504054.1
ENST00000509059.5
ENST00000637569.1
CDS GCA 72 bp ATTTTTCAGCTAGCCTGTGAAGAATATGGCCCAGTATaGAATTGTTGGAGGGTGGTAAATTGTCAACCATTT +
Preference number: 6 (lower is better)
Translates to: IFQLACEEYGPV*NCWRVVNCQPF
Trigger: AAATGGTTGACAATTTACCACCCTCCAACAATTGCATACTGGGCCATATTCTTCACAGGCTAGCTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000503074.1
ENST00000504054.1
ENST00000509059.5
ENST00000637569.1
CDS CCA 72 bp ATTCTGATCAAACTGCACACCCAGAAGGTTAAGTGTTaGCTCCAAGCGAGAAAAATTATTAAGTTTGGCACT +
Preference number: 6 (lower is better)
Translates to: ILIKLHTQKVKC*LQARKIIKFGT
Trigger: AGTGCCAAACTTAATAATTTTTCTCGCTTGGAGCCAACACTTAACCTTCTGGGTGTGCAGTTTGATCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CCA 72 bp TCATGTTTTGAAGTCTTAAATTTGTCAGACGTTGCATaGTTTGCATCTCCACTCCAGTCAGTCCACTTTTCT +
Preference number: 6 (lower is better)
Translates to: SCFEVLNLSDVA*FASPLQSVHFS
Trigger: AGAAAAGTGGACTGACTGGAGTGGAGATGCAAACCATGCAACGTCTGACAAATTTAAGACTTCAAAACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CCA 72 bp CCTCCCTTTCCTTACAGAAAAACGATAGATTTAGACTaGATCAAAGATTTCACACTGATGACTGTCATCTGG +
Preference number: 6 (lower is better)
Translates to: PPFPYRKTIDLD*IKDFTLMTVIW
Trigger: CCAGATGACAGTCATCAGTGTGAAATCTTTGATCCAGTCTAAATCTATCGTTTTTCTGTAAGGAAAGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 72 bp AGCCAATGCTTTTGTCTTTATCAGTTCAAGTCGAAATaGCGTGGCTATTTCTTCAAATTGCAAGGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: SQCFCLYQFKSK*RGYFFKLQGSK
Trigger: CTTGCTGCCTTGCAATTTGAAGAAATAGCCACGCAATTTCGACTTGAACTGATAAAGACAAAAGCATTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000506526.5
ENST00000637061.1
ENST00000637569.1
CDS CAA 72 bp CTCTCCAACCATGTTCTTGTCTCCAGTGTTAATAATTaGAAGCCAAATACCCTTCACATGACCCAAGTTCAT +
Preference number: 6 (lower is better)
Translates to: LSNHVLVSSVNN*KPNTLHMTQVH
Trigger: ATGAACTTGGGTCATGTGAAGGGTATTTGGCTTCAAATTATTAACACTGGAGACAAGAACATGGTTGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504054.1
CDS TCA 72 bp TGGGGTGTGGAGGTTTCAGTTCCACTGAAACTAAAGTaGAGAACTGCTTTATATCTGATGCTTTTCATATAC +
Preference number: 6 (lower is better)
Translates to: WGVEVSVPLKLK*RTALYLMLFIY
Trigger: GTATATGAAAAGCATCAGATATAAAGCAGTTCTTCACTTTAGTTTCAGTGGAACTGAAACCTCCACACCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CAA 72 bp TACTGGGATTTTACTTTCCATTCCCCAGTAATAATCTaGAAGGAGTCTCTTTGTATCTTGGAAACGGTTCAG +
Preference number: 6 (lower is better)
Translates to: YWDFTFHSPVII*KESLCILETVQ
Trigger: CTGAACCGTTTCCAAGATACAAAGAGACTCCTTCAAGATTATTACTGGGGAATGGAAAGTAAAATCCCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 72 bp TCCATCTTGCCCTTCAGTACTGATTTTGTTTTTGGTTaGGGTGTAACTGTTTCCAGAGAAATGGATATTCGA +
Preference number: 6 (lower is better)
Translates to: SILPFSTDFVFG*GVTVSREMDIR
Trigger: TCGAATATCCATTTCTCTGGAAACAGTTACACCCAAACCAAAAACAAAATCAGTACTGAAGGGCAAGATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000637569.1
CDS CAA 90 bp ACAATTGAGTCTTTCCCTTGGCTTTTCCAATTACTCAATTTCTCATaGAATTCCCCACAGGTAATAGAACCTGACTTTATTCACATCTGG +
Preference number: 6 (lower is better)
Translates to: TIESFPWLFQLLNFS*NSPQVIEPDFIHIW
Trigger: CCAGATGTGAATAAAGTCAGGTTCTATTACCTGTGGGGAATTCAATGAGAAATTGAGTAATTGGAAAAGCCAAGGGAAAGACTCAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS TCA 72 bp CAATTTCTCATTGAATTCCCCACAGGTAATAGAACCTaGCTTTATTCACATCTGGGTAAAAGAAGTCAAGCT +
Preference number: 6 (lower is better)
Translates to: QFLIEFPTGNRT*LYSHLGKRSQA
Trigger: AGCTTGACTTCTTTTACCCAGATGTGAATAAAGTCAGGTTCTATTACCTGTGGGGAATTCAATGAGAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS CCA 72 bp GTATGTAATCCGCATCAGATTGAAATCAGTTTGACGTaGTATCATGTGTCTAAGTCTCTCTTGAAAAGTATC +
Preference number: 6 (lower is better)
Translates to: VCNPHQIEISLT*YHVSKSLLKSI
Trigger: GATACTTTTCAAGAGAGACTTAGACACATGATACCACGTCAAACTGATTTCAATCTGATGCGGATTACATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS CAA 72 bp TTAAGTGTTGGCTCCAAGCGAGAAAAATTATTAAGTTaGGCACTTGAAACCCTGCTGTCCAAAAATTCTGAA +
Preference number: 6 (lower is better)
Translates to: LSVGSKREKLLS*ALETLLSKNSE
Trigger: TTCAGAATTTTTGGACAGCAGGGTTTCAAGTGCCAAACTTAATAATTTTTCTCGCTTGGAGCCAACACTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000505088.1
ENST00000505847.5
ENST00000509059.5
ENST00000510777.5
ENST00000637569.1
CDS CAA 72 bp AAACCTGTATGTAATCCGCATCAGATTGAAATCAGTTaGACGTGGTATCATGTGTCTAAGTCTCTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: KPVCNPHQIEIS*TWYHVSKSLLK
Trigger: TTTCAAGAGAGACTTAGACACATGATACCACGTCAAACTGATTTCAATCTGATGCGGATTACATACAGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS CAA 90 bp CATCAACCACCTTTGTTACTAAATCTTCAAGAAGAGCCAATGCTTTaGTCTTTATCAGTTCAAGTCGAAATTGCGTGGCTATTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: HQPPLLLNLQEEPML*SLSVQVEIAWLFLQ
Trigger: TTGAAGAAATAGCCACGCAATTTCGACTTGAACTGATAAAGACAAAAGCATTGGCTCTTCTTGAAGATTTAGTAACAAAGGTGGTTGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000506526.5
ENST00000637061.1
ENST00000637569.1
CDS CAA 90 bp TTTTTCTTGAAACCTGTATGTAATCCGCATCAGATTGAAATCAGTTaGACGTGGTATCATGTGTCTAAGTCTCTCTTGAAAAGTATCACT +
Preference number: 6 (lower is better)
Translates to: FFLKPVCNPHQIEIS*TWYHVSKSLLKSIT
Trigger: AGTGATACTTTTCAAGAGAGACTTAGACACATGATACCACGTCAAACTGATTTCAATCTGATGCGGATTACATACAGGTTTCAAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1
CDS CAA 72 bp GACTTTTTCATTGTCATGAAATGCTTGGATAGCTTCTaGGACAAGAGTGTCAATAGAAAGTATCTGTATAGG +
Preference number: 6 (lower is better)
Translates to: DFFIVMKCLDSF*DKSVNRKYLYR
Trigger: CCTATACAGATACTTTCTATTGACACTCTTGTCCAAGAAGCTATCCAAGCATTTCATGACAATGAAAAAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356031.8
ENST00000440995.6
ENST00000503074.1
ENST00000504054.1
ENST00000509059.5
ENST00000637569.1
CDS CAA 72 bp TCTTTCCCTTGGCTTTTCCAATTACTCAATTTCTCATaGAATTCCCCACAGGTAATAGAACCTGACTTTATT +
Preference number: 6 (lower is better)
Translates to: SFPWLFQLLNFS*NSPQVIEPDFI
Trigger: AATAAAGTCAGGTTCTATTACCTGTGGGGAATTCAATGAGAAATTGAGTAATTGGAAAAGCCAAGGGAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503074.1
CDS GCA 72 bp ATACGGAATCAGATTATTTGTCAACATTCGATAGTCTaGCACTTTAGTGGACAAATCAACTATTTGATCCAA +
Preference number: 6 (lower is better)
Translates to: IRNQIICQHSIV*HFSGQINYLIQ
Trigger: TTGGATCAAATAGTTGATTTGTCCACTAAAGTGGCAGACTATCGAATGTTGACAAATAATCTGATTCCGTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000503074.1
ENST00000509059.5
ENST00000637569.1
CDS GCA 72 bp ATAGAGCCCTCTTTGAAAACTAATACATTGATGTTCTaGTCTGTTAAGTTAGAATCAGTGTGCTTGATTACT +
Preference number: 6 (lower is better)
Translates to: IEPSLKTNTLMF*SVKLESVCLIT
Trigger: AGTAATCAAGCACACTGATTCTAACTTAACAGAGCAGAACATCAATGTATTAGTTTTCAAAGAGGGCTCTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504054.1
CDS CAA 72 bp ATGGGCAAGATCTTCTTTCACGTGTTTATATTTTTCTaGAAACCTGTATGTAATCCGCATCAGATTGAAATC +
Preference number: 6 (lower is better)
Translates to: MGKIFFHVFIFF*KPVCNPHQIEI
Trigger: GATTTCAATCTGATGCGGATTACATACAGGTTTCAAGAAAAATATAAACACGTGAAAGAAGATCTTGCCCAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282469.10
ENST00000356031.8
ENST00000440995.6
ENST00000509059.5
ENST00000637569.1