RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPECC1L (Homo sapiens)

Ensembl gene IDs: ENSG00000100014

Ensembl transcript IDs: ENST00000314328.14, ENST00000416735.5, ENST00000421374.5, ENST00000437398.5, ENST00000440893.1, ENST00000472799.1, ENST00000541492.1, ENST00000651059.1

Found 1047 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCACCCCAGCCCTaGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTAGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: ARKPSRVSAAAAPQP*RARTTPSRYSPSSG
Trigger: GCCTGAGCTAGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp CAGGGCTCACTGTCCCACAGCCCCAGGCCACACGGTGATGTGCTGTaGCCCAGGGGAGGCCACCCTGGACTCCTGGTCAGGATCTGCCCA +
Preference number: 1 (lower is better)
Translates to: QGSLSHSPRPHGDVL*PRGGHPGLLVRICP
Trigger: TGGGCAGATCCTGACCAGGAGTCCAGGGTGGCCTCCCCTGGGCCACAGCACATCACCGTGTGGCCTGGGGCTGTGGGACAGTGAGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR GCA 90 bp GGTTACAGGGCTCACTGTCCCACAGCCCCAGGCCACACGGTGATGTaGTGTGGCCCAGGGGAGGCCACCCTGGACTCCTGGTCAGGATCT +
Preference number: 1 (lower is better)
Translates to: GYRAHCPTAPGHTVM*CGPGEATLDSWSGS
Trigger: AGATCCTGACCAGGAGTCCAGGGTGGCCTCCCCTGGGCCACAGCACATCACCGTGTGGCCTGGGGCTGTGGGACAGTGAGCCCTGTAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR CCA 90 bp CGGGCTGGCTGGGCCTCCTGTGAGCCCCTCATTGCATCCAGTCTGTaGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGG +
Preference number: 1 (lower is better)
Translates to: RAGWASCEPLIASSL*GSDPASTGGWSSSW
Trigger: CCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCACAGACTGGATGCAATGAGGGGCTCACAGGAGGCCCAGCCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 90 bp TGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTAGCTCAGGCTaGACACGCCTGGATTGTGTCGGCCGGGACAGCCCCGTCAGGTGT +
Preference number: 1 (lower is better)
Translates to: WRARTTPSRYSPSSG*TRLDCVGRDSPVRC
Trigger: ACACCTGACGGGGCTGTCCCGGCCGACACAATCCAGGCGTGTTCAGCCTGAGCTAGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 90 bp GTACCTGGGGAGGGCGGGCATGGTGGTAGGAGACAACTCAACCACTaGGTCTTGGAGGTCCTGCCTTGGCCACGGAGGGCAGTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: VPGEGGHGGRRQLNH*VLEVLPWPRRAVAA
Trigger: GGCAGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCTCCTACCACCATGCCCGCCCTCCCCAGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 90 bp CCTGGATTGTGTCGGCCGGGACAGCCCCGTCAGGTGTGGGGCAGCTaGCCCACGTCTGTGGTGAACATGCTCCTCCAAACTAGGACGGTG +
Preference number: 1 (lower is better)
Translates to: PGLCRPGQPRQVWGS*PTSVVNMLLQTRTV
Trigger: CACCGTCCTAGTTTGGAGGAGCATGTTCACCACAGACGTGGGTCAGCTGCCCCACACCTGACGGGGCTGTCCCGGCCGACACAATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp GGGAGGGCGGGCATGGTGGTAGGAGACAACTCAACCACTGAGTCTTaGAGGTCCTGCCTTGGCCACGGAGGGCAGTGGCTGCCCTCACAA +
Preference number: 1 (lower is better)
Translates to: GRAGMVVGDNSTTES*RSCLGHGGQWLPSQ
Trigger: TTGTGAGGGCAGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCTCCTACCACCATGCCCGCCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp AGGTGCCCTTCTCTCCACAGCCAGTCCCAGGAGGGAGCTGGGTTCTaGTTTATGCGACGTCAGAGGGACGGCAGGGAGTGGAGGGCAAGC +
Preference number: 1 (lower is better)
Translates to: RCPSLHSQSQEGAGF*FMRRQRDGREWRAS
Trigger: GCTTGCCCTCCACTCCCTGCCGTCCCTCTGACGTCGCATAAACCAGAACCCAGCTCCCTCCTGGGACTGGCTGTGGAGAGAAGGGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR CCA 90 bp CTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTaGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTT +
Preference number: 1 (lower is better)
Translates to: LWATRLSSSNTEAPS*RLTRCGAAQSCWKL
Trigger: AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp GTGAACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTaGGAACTGCCAGGCGCTGACTCTCCTTCTGGGTTCTCACCAGCA +
Preference number: 1 (lower is better)
Translates to: VNMLLQTRTVKGPGR*ELPGADSPSGFSPA
Trigger: TGCTGGTGAGAACCCAGAAGGAGAGTCAGCGCCTGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp GCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTGGGGTCTTaGCATCTGTCACAGAACCCTAGTGGTTACAGGGCTCACTGTCCC +
Preference number: 1 (lower is better)
Translates to: ASALLGVALPRSLGS*HLSQNPSGYRAHCP
Trigger: GGGACAGTGAGCCCTGTAACCACTAGGGTTCTGTGACAGATGCCAAGACCCCAGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR CCA 90 bp GAGTTCTTCCAATACGGAAGCCCCGAGCTGGAGGCTCACACGCTGTaGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCT +
Preference number: 1 (lower is better)
Translates to: EFFQYGSPELEAHTL*GSPELLEALQGCVA
Trigger: AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGTATTGGAAGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp GGTTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTaGCGCGGCCGAGCCTTCATCAACCCTAGTGAGTTTCCCACAGAA +
Preference number: 1 (lower is better)
Translates to: GSHQHRNPPQPIVRK*RGRAFINPSEFPTE
Trigger: TTCTGTGGGAAACTCACTAGGGTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp GGCATGGTGGTAGGAGACAACTCAACCACTGAGTCTTGGAGGTCCTaGCTTGGCCACGGAGGGCAGTGGCTGCCCTCACAAGAAGAGTTA +
Preference number: 1 (lower is better)
Translates to: GMVVGDNSTTESWRS*LGHGGQWLPSQEEL
Trigger: TAACTCTTCTTGTGAGGGCAGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCTCCTACCACCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTaGTATGCAGGTGCCAAACACAGTTATATTCTCAAAGGTACAGGT +
Preference number: 1 (lower is better)
Translates to: WGSDPASTGGWSSSW*YAGAKHSYILKGTG
Trigger: ACCTGTACCTTTGAGAATATAACTGTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp CTGTGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATaGTGCTATGCAGGTGCCAAACACAGTTATATTCTCAAAGGTACA +
Preference number: 1 (lower is better)
Translates to: LWGSDPASTGGWSSS*CYAGAKHSYILKGT
Trigger: TGTACCTTTGAGAATATAACTGTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp ATTGCATCCAGTCTGTGGGGCAGTGACCCCGCTTCCACTGGTGGCTaGTCTTCCTCATGGTGCTATGCAGGTGCCAAACACAGTTATATT +
Preference number: 1 (lower is better)
Translates to: IASSLWGSDPASTGG*SSSWCYAGAKHSYI
Trigger: AATATAACTGTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCACAGACTGGATGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp CAGTGTCCTAAGGATCCTATTAGACGAGGCAAAAGGCAATGCTTCTaGAACCCTCTCCCTTGCAGCTCTGCACGCAAACCTTCCCCAAGG +
Preference number: 1 (lower is better)
Translates to: QCPKDPIRRGKRQCF*NPLPCSSARKPSPR
Trigger: CCTTGGGGAAGGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCAGAAGCATTGCCTTTTGCCTCGTCTAATAGGATCCTTAGGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp CCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTaGCAAACACAGTTATATTCTCAAAGGTACAGGTCTTGTCTGGAC +
Preference number: 1 (lower is better)
Translates to: PRFHWWLVFLMVLCR*QTQLYSQRYRSCLD
Trigger: GTCCAGACAAGACCTGTACCTTTGAGAATATAACTGTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp ATTCTAGGTTACGTAGACACGTTAAACTCCTATTCTAGAACATCGTaGTTGAATGCAGACCCCTCAGCCCACAATCGGGCTGGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: ILGYVDTLNSYSRTS*LNADPSAHNRAGWA
Trigger: GGCCCAGCCAGCCCGATTGTGGGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTAACCTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp GCAGTAAAGCTTGTGCTTGAAGGGAGAAGAGGCAAAGTGGCTTCTTaGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCATCTCCAAA +
Preference number: 1 (lower is better)
Translates to: AVKLVLEGRRGKVAS*RLRARCHRTESISK
Trigger: TTTGGAGATGCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTCTCCCTTCAAGCACAAGCTTTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp GAAGGGAGAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATaGCACAGGACTGAGAGCATCTCCAAATGTCACTTTAAACACGTG +
Preference number: 1 (lower is better)
Translates to: EGRRGKVASWRLRAR*HRTESISKCHFKHV
Trigger: CACGTGTTTAAAGTGACATTTGGAGATGCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 90 bp GGTGGAGTGGCCTCTGTGAAGGCAAATGAGAGCAAAAGTGGGAACTaGGGACACCTAAGTGGAGAGACACTTAAAAACAGTAATTCTCAC +
Preference number: 1 (lower is better)
Translates to: GGVASVKANESKSGN*GHLSGETLKNSNSH
Trigger: GTGAGAATTACTGTTTTTAAGTGTCTCTCCACTTAGGTGTCCTCAGTTCCCACTTTTGCTCTCATTTGCCTTCACAGAGGCCACTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp AGTGAGTTTCCCACAGAACTGAATCCCTTTTCCCAAATTCAGCTGTaGATGAGCCCTTTTTGTTTGGTGCCCTGGAGCACTAGTGTAGTT +
Preference number: 1 (lower is better)
Translates to: SEFPTELNPFSQIQL*MSPFCLVPWSTSVV
Trigger: AACTACACTAGTGCTCCAGGGCACCAAACAAAAAGGGCTCATGCACAGCTGAATTTGGGAAAAGGGATTCAGTTCTGTGGGAAACTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp GCAGGTGCCAAACACAGTTATATTCTCAAAGGTACAGGTCTTGTCTaGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAG +
Preference number: 1 (lower is better)
Translates to: AGAKHSYILKGTGLV*TLFKPIATALGTRE
Trigger: CTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACAAGACCTGTACCTTTGAGAATATAACTGTGTTTGGCACCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 90 bp AGTAATTCTCACATGAACATCAGTGGCTCATGCCAACAGCAGAGCTaGCCATCAACAGAGGAACAGCAACAAAAACACAACTCAGACAGG +
Preference number: 1 (lower is better)
Translates to: SNSHMNISGSCQQQS*PSTEEQQQKHNSDR
Trigger: CCTGTCTGAGTTGTGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCACTGATGTTCATGTGAGAATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 90 bp TGCCACAGGACTGAGAGCATCTCCAAATGTCACTTTAAACACGTGTaGGCATCTATAGTCATTCCTAAAGCCCACAGTGTCCTAAGGATC +
Preference number: 1 (lower is better)
Translates to: CHRTESISKCHFKHV*ASIVIPKAHSVLRI
Trigger: GATCCTTAGGACACTGTGGGCTTTAGGAATGACTATAGATGCTCACACGTGTTTAAAGTGACATTTGGAGATGCTCTCAGTCCTGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp GAGACACTTAAAAACAGTAATTCTCACATGAACATCAGTGGCTCATaGCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAA +
Preference number: 1 (lower is better)
Translates to: ETLKNSNSHMNISGS*QQQSWPSTEEQQQK
Trigger: TTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCACTGATGTTCATGTGAGAATTACTGTTTTTAAGTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp ACACTGCCTGGGCTCCCTAAAGTTGTTTACTTTTCTCCTATTTCCTaGTTTATTCCTTGCTCTCACCATGCTAATGTACAGATGTTGTTT +
Preference number: 1 (lower is better)
Translates to: TLPGLPKVVYFSPIS*FIPCSHHANVQMLF
Trigger: AAACAACATCTGTACATTAGCATGGTGAGAGCAAGGAATAAAGCAGGAAATAGGAGAAAAGTAAACAACTTTAGGGAGCCCAGGCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 90 bp CCTTGCTCTCACCATGCTAATGTACAGATGTTGTTTAGATTTCTATaGTTATTGAAACAATGTAACTTTGGTACTAACAGAACAGGAGCG +
Preference number: 1 (lower is better)
Translates to: PCSHHANVQMLFRFL*LLKQCNFGTNRTGA
Trigger: CGCTCCTGTTCTGTTAGTACCAAAGTTACATTGTTTCAATAAGCATAGAAATCTAAACAACATCTGTACATTAGCATGGTGAGAGCAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTACGGAAGCCCCGAGCTaGAGGCTCACACGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPTEAPS*RLTRCG
Trigger: CCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTCAGCAGCCACCGGCCTaGAGGATGTGTGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSQQPPA*RMCAEP
Trigger: GGGCTCAGCACACATCCTGCAGGCCGGTGGCTGCTG...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGGCCCAGCCGCGTGAGTaGAGCAGCAGCACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVAQPRE*SSSTPA
Trigger: GGCTGGGGTGCTGCTGCTGCACTCACGCGGCTGGGC...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRGYPRY*GGSSRH
Trigger: ATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
3UTR-3UTR GCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACCAGCAGCCACCGGCCTaGAGGATGTGTGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINQQPPA*RMCAEP
Trigger: GGGCTCAGCACACATCCTGCAGGCCGGTGGCTGCTG...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: HTLWGSPELLEALQGCVAGYPRY*GGSSRH
Trigger: ATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
3UTR-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTTTGGAGGTCCTGCCTTaGCCACGGAGGGCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSLEVLP*PRRAVA
Trigger: AGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAA...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGTCCAAACTAGGACGGTaGAGGGCCCAGGGCGCTGGG +
Preference number: 2 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVSKLGR*RAQGAG
Trigger: CCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGA...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: WGSPELLEALQGCVANGVGYPRY*GGSSRH
Trigger: ATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
3UTR-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCGTCGCTCGGTCGCTGTaGAGGGGTACCCCCGCTATT +
Preference number: 2 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVVARSL*RGTPAI
Trigger: AATAGCGGGGGTACCCCTCCACAGCGACCGAGCGAC...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTCCCCGCTTCCACTGGTaGCTGGTCTTCCTCATGGTG +
Preference number: 2 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSPRFHW*LVFLMV
Trigger: CACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGG...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR-3UTR CCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGAGGCTCACACGCTGTaGGGCAGCCCAGAGTTGCTG +
Preference number: 2 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAEAHTL*GSPELL
Trigger: CAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTC...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGTGTGCTGAGCCCACATaGCCTGAATGGACGGGTCAT +
Preference number: 2 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPCAEPT*PEWTGH
Trigger: ATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACA...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACGGGGCAGCCCAGAGTTaGTGGAAGCTTTACAGGGGT +
Preference number: 2 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINGAAQS*WKLYRG
Trigger: ACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCC...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTGATAAAGTTGGGAACTaGAGACCAGGGGAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSDKVGN*RPGEAP
Trigger: GGGGGCTTCCCCTGGTCTGCAGTTCCCAACTTTATC...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR-3UTR CCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCAGGCTGAACACGCCTaGATTGTGTCGGCCGGGACA +
Preference number: 2 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVQAEHA*IVSAGT
Trigger: TGTCCCGGCCGACACAATCCAGGCGTGTTCAGCCTG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACCAATAGTCAGGAAGTaGCGCGGCCGAGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPPIVRK*RGRAFI
Trigger: GATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGCCAATAGTCAGGAAGTaGCGCGGCCGAGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKPIVRK*RGRAFI
Trigger: GATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGG...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTGCTTCCACTGGTGGCTaGTCTTCCTCATGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSASTGG*SSSWCY
Trigger: ATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGC...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCTTCTGGCCATCTGGTaGCCAGGTGTGCCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: RGKVASWRLRARCHRTESLLAIW*PGVPPA
Trigger: AGCTGGCGGCACACCTGGTCACCAGATGGCCAGAAG...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTAGCAAAAGTGGGAACTaGGGACACCTAAGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSSKSGN*GHLSGE
Trigger: CTCTCCACTTAGGTGTCCTCAGTTCCCACTTTTGCT...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR-3UTR GCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCGCCCAGCCGCGTGAGTaGAGCAGCAGCACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPAQPRE*SSSTPA
Trigger: GGCTGGGGTGCTGCTGCTGCACTCACGCGGCTGGGC...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACACAATCGGGCTGGCTaGGCCTCCTGTGAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRHNRAG*ASCEPL
Trigger: GAGGGGCTCACAGGAGGCCCAGCCAGCCCGATTGTG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAAGACAACTCAACCACTaGGTCTTGGAGGTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: WGSDPASTGGWSSSWCYARQLNH*VLEVLP
Trigger: AGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCT...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCAAGGGCCCAGGGCGCTaGGAACTGCCAGGCGCTGAC +
Preference number: 2 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPKGPGR*ELPGAD
Trigger: GTCAGCGCCTGGCAGTTCCCAGCGCCCTGGGCCCTT...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATCCAAACTAGGACGGTaGAGGGCCCAGGGCGCTGGG +
Preference number: 2 (lower is better)
Translates to: WLMPTAELAINRGTATKTSKLGR*RAQGAG
Trigger: CCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCATGTGGGAGGGGCCCTaGTGGGAGCTGTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPMWEGP*WELWAT
Trigger: TGTGGCCCACAGCTCCCACCAGGGCCCCTCCCACAT...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACAATGTGGGAGGGGCCCTaGTGGGAGCTGTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: WLMPTAELAINRGTATKTMWEGP*WELWAT
Trigger: TGTGGCCCACAGCTCCCACCAGGGCCCCTCCCACAT...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTGTGGGCCACACGGCTaGGTTCTTCCAATACGGAAG +
Preference number: 2 (lower is better)
Translates to: RGKVASWRLRARCHRTESCGPHG*VLPIRK
Trigger: CTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACAAATTCAGCTGTGCATaGGCCCTTTTTGTTTGGTGC +
Preference number: 2 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINKFSCA*ALFVWC
Trigger: GCACCAAACAAAAAGGGCTCATGCACAGCTGAATTT...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACACCTGAGCTCCCAGGCTaGCATCTGGGCAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: WLMPTAELAINRGTATKTPELPG*HLGRAD
Trigger: ATCAGCCCTGCCCAGATGTCAGCCTGGGAGCTCAGG...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCACAAACCAATAGCTACTaGGTTAGGCACACGGGAGAT +
Preference number: 2 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAQTNSY*VRHTGD
Trigger: ATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTG...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCAAACCAATAGCTACTaGGTTAGGCACACGGGAGAT +
Preference number: 2 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVQTNSY*VRHTGD
Trigger: ATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGATAAAGTTGGGAACTaGAGACCAGGGGAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: RGKVASWRLRARCHRTESDKVGN*RPGEAP
Trigger: GGGGGCTTCCCCTGGTCTGCAGTTCCCAACTTTATC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTCTCCCTTGCAGCTCTaGACGCAAACCTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: RGKVASWRLRARCHRTESSPLQL*TQTFPK
Trigger: CTTGGGGAAGGTTTGCGTGCAGAGCTGCAAGGGAGA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGATAGCTGTTGAGTTCTaGCCTGAGAGCATCTCCAGT +
Preference number: 2 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVIAVEF*PESISS
Trigger: ACTGGAGATGCTCTCAGGCCAGAACTCAACAGCTAT...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGTCTGCGGGGGTCTCTaGTATGCTTTGTGGCATGAC +
Preference number: 2 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRVCGGL*YALWHD
Trigger: GTCATGCCACAAAGCATATCAGAGACCCCCGCAGAC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCAGCACCTGGGGAGGGTaGGCACAGGGGGCATGGACC +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPSTWGG*AQGAWT
Trigger: GGTCCATGCCCCCTGTGCCCACCCTCCCCAGGTGCT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGGCTGGTCTTCCTCATaGTGCTATGCAGGTGCCAAA +
Preference number: 2 (lower is better)
Translates to: RGKVASWRLRARCHRTESGWSSS*CYAGAK
Trigger: TTTGGCACCTGCATAGCACCATGAGGAAGACCAGCC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CAA 90 bp CTAGGTTACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTaGAATGCAGACCCCTCAGCCCACAATCGGGCTGGCTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: LGYVDTLNSYSRTSC*NADPSAHNRAGWAS
Trigger: GGAGGCCCAGCCAGCCCGATTGTGGGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCATATGCTTTGTGGCATaGCTTTGCTTGCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: RGKVASWRLRARCHRTESICFVA*LCLPGL
Trigger: GAGGCCAGGCAAGCAAAGTCATGCCACAAAGCATAT...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGAAGCTTTACAGGGGTaGGTAGCTAATGGCGTCGGT +
Preference number: 2 (lower is better)
Translates to: EEAKWLLGDFVPDATGLREALQG*VANGVG
Trigger: ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACAGCAGCCCAGAGTTGCTaGAAGCTTTACAGGGGTGCG +
Preference number: 2 (lower is better)
Translates to: WLMPTAELAINRGTATKTAAQSC*KLYRGA
Trigger: CGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGC...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTTCCACTGGTGGCTaGTCTTCCTCATGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRASTGG*SSSWCY
Trigger: ATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATGTGGGCCACACGGCTaGGTTCTTCCAATACGGAAG +
Preference number: 2 (lower is better)
Translates to: WLMPTAELAINRGTATKTCGPHG*VLPIRK
Trigger: CTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCCAGGTGTGGGGCAGCTaGCCCACGTCTGTGGTGAAC +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPQVWGS*PTSVVN
Trigger: GTTCACCACAGACGTGGGTCAGCTGCCCCACACCTG...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCCAGGGCGCTGGGAACTaGCAGGCGCTGACTCTCCTT +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPQGAGN*QALTLL
Trigger: AAGGAGAGTCAGCGCCTGGCAGTTCCCAGCGCCCTG...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTGTCGCTCGGTCGCTGTaGAGGGGTACCCCCGCTATT +
Preference number: 2 (lower is better)
Translates to: QCNFGTNRTGATFSSIARVARSL*RGTPAI
Trigger: AATAGCGGGGGTACCCCTCCACAGCGACCGAGCGAC...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGGGCAGCCCAGAGTTaGTGGAAGCTTTACAGGGGT +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGAAQS*WKLYRG
Trigger: ACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTTTTGTTTGGTGCCCTaGAGCACTAGTGTAGTTCAA +
Preference number: 2 (lower is better)
Translates to: RGKVASWRLRARCHRTESFCLVP*STSVVQ
Trigger: TTGAACTACACTAGTGCTCCAGGGCACCAAACAAAA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCATTGCATCCAGTCTGTaGGGCAGTGACCCCGCTTCC +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPIASSL*GSDPAS
Trigger: GGAAGCGGGGTCACTGCCCCACAGACTGGATGCAAT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCTGTGCTGAGCCCACATaGCCTGAATGGACGGGTCAT +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPCAEPT*PEWTGH
Trigger: ATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACA...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCAGACAACTCAACCACTaGGTCTTGGAGGTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPRQLNH*VLEVLP
Trigger: AGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCTGGTCTTCCTCATGGTaGTATGCAGGTGCCAAACAC +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPWSSSW*YAGAKH
Trigger: GTGTTTGGCACCTGCATAGCACCATGAGGAAGACCA...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CAA 90 bp GCCAAACACAGTTATATTCTCAAAGGTACAGGTCTTGTCTGGACATaGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCT +
Preference number: 2 (lower is better)
Translates to: AKHSYILKGTGLVWT*FKPIATALGTREIP
Trigger: AGGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACAAGACCTGTACCTTTGAGAATATAACTGTGTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCATAGCTGTTGAGTTCTaGCCTGAGAGCATCTCCAGT +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPIAVEF*PESISS
Trigger: ACTGGAGATGCTCTCAGGCCAGAACTCAACAGCTAT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CAA 90 bp CTGAATCCCTTTTCCCAAATTCAGCTGTGCATGAGCCCTTTTTGTTaGGTGCCCTGGAGCACTAGTGTAGTTCAATATTCTCTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: LNPFSQIQLCMSPFC*VPWSTSVVQYSLQK
Trigger: CTTCTGAAGAGAATATTGAACTACACTAGTGCTCCAGGGCACCAAACAAAAAGGGCTCATGCACAGCTGAATTTGGGAAAAGGGATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCTTTTCTCCTATTTCCTaGTTTATTCCTTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPFSPIS*FIPCSH
Trigger: GTGAGAGCAAGGAATAAAGCAGGAAATAGGAGAAAA...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCTTCCTCATGGTGCTATaGAGGTGCCAAACACAGTTA +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPFLMVL*RCQTQL
Trigger: TAACTGTGTTTGGCACCTGCATAGCACCATGAGGAA...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTAGTTTCCCACAGAACTaGATCCCTTTTCCCAAATTC +
Preference number: 2 (lower is better)
Translates to: QCNFGTNRTGATFSSIARSFPQN*IPFPKF
Trigger: GAATTTGGGAAAAGGGATTCAGTTCTGTGGGAAACT...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCATGGTGCTATGCAGGTaGCAAACACAGTTATATTCT +
Preference number: 2 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPMVLCR*QTQLYS
Trigger: AGAATATAACTGTGTTTGGCACCTGCATAGCACCAT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 72 bp CCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTaGGTGCAGCAGCAGCACCCCAGCCCTGGCGTGCCC +
Preference number: 3 (lower is better)
Translates to: PRNCFPPESPAA*VQQQHPSPGVP
Trigger: GGGCACGCCAGGGCTGGGGTGCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp GCTCACTGTCCCACAGCCCCAGGCCACACGGTGATGTaGTGTGGCCCAGGGGAGGCCACCCTGGACTCCTGG +
Preference number: 3 (lower is better)
Translates to: AHCPTAPGHTVM*CGPGEATLDSW
Trigger: CCAGGAGTCCAGGGTGGCCTCCCCTGGGCCACAGCACATCACCGTGTGGCCTGGGGCTGTGGGACAGTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR CCA 72 bp CCCAGCCGCGTGAGTGCAGCAGCAGCACCCCAGCCCTaGCGTGCCCGCACCACGCCCTCTAGATACTCTCCT +
Preference number: 3 (lower is better)
Translates to: PSRVSAAAAPQP*RARTTPSRYSP
Trigger: AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGCTGCACTCACGCGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp CAGGCTGACATCTGGGCAGGGCTGATGGGCAGCTTCTaGCCATCTGGTGACCAGGTGTGCCGCCAGCTGCAC +
Preference number: 3 (lower is better)
Translates to: QADIWAGLMGSF*PSGDQVCRQLH
Trigger: GTGCAGCTGGCGGCACACCTGGTCACCAGATGGCCAGAAGCTGCCCATCAGCCCTGCCCAGATGTCAGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 72 bp TGTCGGCCGGGACAGCCCCGTCAGGTGTGGGGCAGCTaGCCCACGTCTGTGGTGAACATGCTCCTCCAAACT +
Preference number: 3 (lower is better)
Translates to: CRPGQPRQVWGS*PTSVVNMLLQT
Trigger: AGTTTGGAGGAGCATGTTCACCACAGACGTGGGTCAGCTGCCCCACACCTGACGGGGCTGTCCCGGCCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 72 bp CGCACCACGCCCTCTAGATACTCTCCTAGCTCAGGCTaGACACGCCTGGATTGTGTCGGCCGGGACAGCCCC +
Preference number: 3 (lower is better)
Translates to: RTTPSRYSPSSG*TRLDCVGRDSP
Trigger: GGGGCTGTCCCGGCCGACACAATCCAGGCGTGTTCAGCCTGAGCTAGGAGAGTATCTAGAGGGCGTGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 72 bp GAGGGCGGGCATGGTGGTAGGAGACAACTCAACCACTaGGTCTTGGAGGTCCTGCCTTGGCCACGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: EGGHGGRRQLNH*VLEVLPWPRRA
Trigger: TGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCTCCTACCACCATGCCCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTaGGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTG +
Preference number: 3 (lower is better)
Translates to: WGSPELLEALQG*VANGVGVARSL
Trigger: CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
3UTR CCA 72 bp CAATACGGAAGCCCCGAGCTGGAGGCTCACACGCTGTaGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGG +
Preference number: 3 (lower is better)
Translates to: QYGSPELEAHTL*GSPELLEALQG
Trigger: CCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGTATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp ACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTaGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGC +
Preference number: 3 (lower is better)
Translates to: TRLSSSNTEAPS*RLTRCGAAQSC
Trigger: GCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CAA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGTGGGGCAGCCCAGAGTaGCTGGAAGCTTTACAGGGG +
Preference number: 3 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGWGSPE*LEALQG
Trigger: CCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CAA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATGGGGCAGCCCAGAGTaGCTGGAAGCTTTACAGGGG +
Preference number: 3 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAWGSPE*LEALQG
Trigger: CCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp TTGAATGCAGACCCCTCAGCCCACAATCGGGCTGGCTaGGCCTCCTGTGAGCCCCTCATTGCATCCAGTCTG +
Preference number: 3 (lower is better)
Translates to: LNADPSAHNRAG*ASCEPLIASSL
Trigger: CAGACTGGATGCAATGAGGGGCTCACAGGAGGCCCAGCCAGCCCGATTGTGGGCTGAGGGGTCTGCATTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp CAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTaGCGCGGCCGAGCCTTCATCAACCCTAGTGAGTTT +
Preference number: 3 (lower is better)
Translates to: QHRNPPQPIVRK*RGRAFINPSEF
Trigger: AAACTCACTAGGGTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp GCTTCTGGCCATCTGGTGACCAGGTGTGCCGCCAGCTaGACCCACATGCACAGCCCCTTTCCTAATAACCAC +
Preference number: 3 (lower is better)
Translates to: ASGHLVTRCAAS*THMHSPFPNNH
Trigger: GTGGTTATTAGGAAAGGGGCTGTGCATGTGGGTGCAGCTGGCGGCACACCTGGTCACCAGATGGCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp AGTCTGTGGGGCAGTGACCCCGCTTCCACTGGTGGCTaGTCTTCCTCATGGTGCTATGCAGGTGCCAAACAC +
Preference number: 3 (lower is better)
Translates to: SLWGSDPASTGG*SSSWCYAGAKH
Trigger: GTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCACAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp CTCCTGGGGGTAGCTCTGCCACGGTCTCTGGGGTCTTaGCATCTGTCACAGAACCCTAGTGGTTACAGGGCT +
Preference number: 3 (lower is better)
Translates to: LLGVALPRSLGS*HLSQNPSGYRA
Trigger: AGCCCTGTAACCACTAGGGTTCTGTGACAGATGCCAAGACCCCAGAGACCGTGGCAGAGCTACCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR GCA 72 bp GGGCTCGCATGGCCAGCAAGGGATAAAGTTGGGAACTaGAGACCAGGGGAAGCCCCCTCATTCTTAGGGCAA +
Preference number: 3 (lower is better)
Translates to: GLAWPARDKVGN*RPGEAPSFLGQ
Trigger: TTGCCCTAAGAATGAGGGGGCTTCCCCTGGTCTGCAGTTCCCAACTTTATCCCTTGCTGGCCATGCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp GAGTCTTGGAGGTCCTGCCTTGGCCACGGAGGGCAGTaGCTGCCCTCACAAGAAGAGTTAAGGCACTTTCTT +
Preference number: 3 (lower is better)
Translates to: ESWRSCLGHGGQ*LPSQEELRHFL
Trigger: AAGAAAGTGCCTTAACTCTTCTTGTGAGGGCAGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CAA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGTGCATGAGCCCTTTTaGTTTGGTGCCCTGGAGCAC +
Preference number: 3 (lower is better)
Translates to: RGKVASWRLRARCHRTESVHEPF*FGALEH
Trigger: GTGCTCCAGGGCACCAAACAAAAAGGGCTCATGCAC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 72 bp TCCCTGTTGCTGACCTCAGGCCTGATGCTGGACCCATaGGACTCCCAGAGGGAAAACACAGATACAGCCCAT +
Preference number: 3 (lower is better)
Translates to: SLLLTSGLMLDP*DSQRENTDTAH
Trigger: ATGGGCTGTATCTGTGTTTTCCCTCTGGGAGTCTCATGGGTCCAGCATCAGGCCTGAGGTCAGCAACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp CTTGTGCTTGAAGGGAGAAGAGGCAAAGTGGCTTCTTaGAGACTTCGTGCCAGATGCCACAGGACTGAGAGC +
Preference number: 3 (lower is better)
Translates to: LVLEGRRGKVAS*RLRARCHRTES
Trigger: GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTCTCCCTTCAAGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp AGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATaGTGCTATGCAGGTGCCAAACACAGTTATATTCTC +
Preference number: 3 (lower is better)
Translates to: SDPASTGGWSSS*CYAGAKHSYIL
Trigger: GAGAATATAACTGTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp GACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTaGTATGCAGGTGCCAAACACAGTTATATTCTCAAA +
Preference number: 3 (lower is better)
Translates to: DPASTGGWSSSW*YAGAKHSYILK
Trigger: TTTGAGAATATAACTGTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp AAGGATCCTATTAGACGAGGCAAAAGGCAATGCTTCTaGAACCCTCTCCCTTGCAGCTCTGCACGCAAACCT +
Preference number: 3 (lower is better)
Translates to: KDPIRRGKRQCF*NPLPCSSARKP
Trigger: AGGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCAGAAGCATTGCCTTTTGCCTCGTCTAATAGGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp CGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATaGAGGTGCCAAACACAGTTATATTCTCAAAGGTAC +
Preference number: 3 (lower is better)
Translates to: RFHWWLVFLMVL*RCQTQLYSQRY
Trigger: GTACCTTTGAGAATATAACTGTGTTTGGCACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTaGTTGAATGCAGACCCCTCAGCCCACAATCGGGCT +
Preference number: 3 (lower is better)
Translates to: YVDTLNSYSRTS*LNADPSAHNRA
Trigger: AGCCCGATTGTGGGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR-3UTR CAA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACGACCTTTTCCAGCATaGCTCGTAACAAAACAAAAA +
Preference number: 3 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRRPFPA*LVTKQK
Trigger: TTTTTGTTTTGTTACGAGCAATGCTGGAAAAGGTCG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 72 bp GCCTCTGTGAAGGCAAATGAGAGCAAAAGTGGGAACTaGGGACACCTAAGTGGAGAGACACTTAAAAACAGT +
Preference number: 3 (lower is better)
Translates to: ASVKANESKSGN*GHLSGETLKNS
Trigger: ACTGTTTTTAAGTGTCTCTCCACTTAGGTGTCCTCAGTTCCCACTTTTGCTCTCATTTGCCTTCACAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp AGGTCTTGTCTGGACATTGTTCAAACCAATAGCTACTaGGTTAGGCACACGGGAGATCCCTATTCCCAAAAA +
Preference number: 3 (lower is better)
Translates to: RSCLDIVQTNSY*VRHTGDPYSQK
Trigger: TTTTTGGGAATAGGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACAAGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR GCA 72 bp AAAAACAGTAATTCTCACATGAACATCAGTGGCTCATaGCAACAGCAGAGCTGGCCATCAACAGAGGAACAG +
Preference number: 3 (lower is better)
Translates to: KNSNSHMNISGS*QQQSWPSTEEQ
Trigger: CTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCACTGATGTTCATGTGAGAATTACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp ATTCAGCTGTGCATGAGCCCTTTTTGTTTGGTGCCCTaGAGCACTAGTGTAGTTCAATATTCTCTTCAGAAG +
Preference number: 3 (lower is better)
Translates to: IQLCMSPFCLVP*STSVVQYSLQK
Trigger: CTTCTGAAGAGAATATTGAACTACACTAGTGCTCCAGGGCACCAAACAAAAAGGGCTCATGCACAGCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR TCA 72 bp ACTGAGAGCATCTCCAAATGTCACTTTAAACACGTGTaGGCATCTATAGTCATTCCTAAAGCCCACAGTGTC +
Preference number: 3 (lower is better)
Translates to: TESISKCHFKHV*ASIVIPKAHSV
Trigger: GACACTGTGGGCTTTAGGAATGACTATAGATGCTCACACGTGTTTAAAGTGACATTTGGAGATGCTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CCA 72 bp AAACACAGTTATATTCTCAAAGGTACAGGTCTTGTCTaGACATTGTTCAAACCAATAGCTACTGCGTTAGGC +
Preference number: 3 (lower is better)
Translates to: KHSYILKGTGLV*TLFKPIATALG
Trigger: GCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACAAGACCTGTACCTTTGAGAATATAACTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTCCCCAGGCCACACGGTaGTGTGCTGTGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLPQATR*CAVAQG
Trigger: CCCCTGGGCCACAGCACATCACCGTGTGGCCTGGGG...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR GCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTGCCCAGCCGCGTGAGTaGAGCAGCAGCACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLAQPRE*SSSTPA
Trigger: GGCTGGGGTGCTGCTGCTGCACTCACGCGGCTGGGC...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCACGGAAGCCCCGAGCTaGAGGCTCACACGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSTEAPS*RLTRCG
Trigger: CCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGT...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGGTTTGGGCTGGGCGGTaGGCTCACCCGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPVWAGR*AHPVAQ
Trigger: CTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAAC...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCCCTGAGCTCCCAGGCTaGCATCTGGGCAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSPELPG*HLGRAD
Trigger: ATCAGCCCTGCCCAGATGTCAGCCTGGGAGCTCAGG...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTAGGGGCCCCCGTAACTaGTTCCCGCCAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPRGPRN*FPPESP
Trigger: TGGGCTTTCTGGCGGGAAGCAGTTACGGGGGCCCCT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCTCTCCTGGTTTGGGCTaGGCGGTGAGCTCACCCGGT +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSSPGLG*AVSSPG
Trigger: ACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGA...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTGGGCACAGGGGGCATaGACCCAGTACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLWAQGA*TQYLGR
Trigger: CCTCCCCAGGTACTGGGTCCATGCCCCCTGTGCCCA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTTCCAAACTAGGACGGTaGAGGGCCCAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSSKLGR*RAQGAG
Trigger: CCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGA...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGAAAGCCCAGCCGCGTaGGTGCAGCAGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRESPAA*VQQQHP
Trigger: GGGGTGCTGCTGCTGCACTCACGCGGCTGGGCTTTC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTGGCTGGGCCTCCTGTaGGCCCCTCATTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLWLGLL*APHCIQ
Trigger: CTGGATGCAATGAGGGGCTCACAGGAGGCCCAGCCA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCCCCAGGCCACACGGTaGTGTGCTGTGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVPQATR*CAVAQG
Trigger: CCCCTGGGCCACAGCACATCACCGTGTGGCCTGGGG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR GCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGGCCACACGGTGATGTaGTGTGGCCCAGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRGHTVM*CGPGEA
Trigger: GGCCTCCCCTGGGCCACAGCACATCACCGTGTGGCC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSSLAIS*FGLGGE
Trigger: CTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGA...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTGGGAGCGCTCTATGCTaGGGATGCCTTCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPGSALC*GCLPTL
Trigger: CAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCC...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTCATCGCAGGCACTCTTaGCAGGGAAGCAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLHRRHS*QGSRPA
Trigger: AGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATG...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELGYPRY*GGSSRH
Trigger: ATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCC...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTCACGGTGATGTGCTGTaGCCCAGGGGAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSHGDVL*PRGGHP
Trigger: AGGGTGGCCTCCCCTGGGCCACAGCACATCACCGTG...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTGTCTGGAGATCAGCCTaGAACTGCCGCCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPVWRSA*NCRHSA
Trigger: TGCGGAATGGCGGCAGTTTCAGGCTGATCTCCAGAC...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTCCAAACTAGGACGGTaGAGGGCCCAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRSKLGR*RAQGAG
Trigger: CCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCTCCAAACTAGGACGGTaGAGGGCCCAGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVSKLGR*RAQGAG
Trigger: CCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGA...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGGAAAGCCCAGCCGCGTaGGTGCAGCAGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWESPAA*VQQQHP
Trigger: GGGGTGCTGCTGCTGCACTCACGCGGCTGGGCTTTC...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGGAAAGCCCAGCCGCGTaGGTGCAGCAGCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKESPAA*VQQQHP
Trigger: GGGGTGCTGCTGCTGCACTCACGCGGCTGGGCTTTC...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTGGAAGACAGGTCGCTaGGTCCAGGCAAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGWKTGR*VQARGP
Trigger: GGGGCCCCTTGCCTGGACTCAGCGACCTGTCTTCCA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCAGTCTGTGGGGCAGTaGCCCCGCTTCCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGQSVGQ*PRFHWW
Trigger: CCACCAGTGGAAGCGGGGTCACTGCCCCACAGACTG...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGCCAGCGGCAGCAGCCTaGGCTCCCAGGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRPAAAA*APRLTS
Trigger: AGATGTCAGCCTGGGAGCTCAGGCTGCTGCCGCTGG...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACCCCAAGAACACGCGCTaGACCGCATCGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINPKNTR*TASLPR
Trigger: GCGAGGGAGCGATGCGGTGCAGCGCGTGTTCTTGGG...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS-3UTR GCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACCCAAGAACACGCGCTaGACCGCATCGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQPKNTR*TASLPR
Trigger: GCGAGGGAGCGATGCGGTGCAGCGCGTGTTCTTGGG...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS-3UTR GCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGCAGGGCGCTGGGAACTaGCAGGCGCTGACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPQGAGN*QALTLL
Trigger: AAGGAGAGTCAGCGCCTGGCAGTTCCCAGCGCCCTG...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGGAGTCTTGGAGGTCCTaGCTTGGCCACGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPESWRS*LGHGGQ
Trigger: CTGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTC...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAAAGGTGTGCCGCCAGCTaGACCCACATGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQRCAAS*THMHSP
Trigger: GGGGCTGTGCATGTGGGTGCAGCTGGCGGCACACCT...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTCTGGTGACCAGGTGTaGCGCCAGCTGCACCCACAT +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLSGDQV*RQLHPH
Trigger: ATGTGGGTGCAGCTGGCGGCACACCTGGTCACCAGA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGGCCACACGGTGATGTaGTGTGGCCCAGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAGHTVM*CGPGEA
Trigger: GGCCTCCCCTGGGCCACAGCACATCACCGTGTGGCC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGGTGAGCTCACCCGGTaGCTCAGCCGAGACCCGTTG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGGELTR*LSRDPL
Trigger: CAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTTTCGGCTTCGGGTGGTaGGAGTCACAGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPFGFGW*ESQMPL
Trigger: CAACGGCATCTGTGACTCCCACCACCCGAAGCCGAA...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGGYPRY*GGSSRH
Trigger: ATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCC...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAAAGGGCCCAGGGCGCTaGGAACTGCCAGGCGCTGAC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTKGPGR*ELPGAD
Trigger: GTCAGCGCCTGGCAGTTCCCAGCGCCCTGGGCCCTT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGAAGGGCCCAGGGCGCTaGGAACTGCCAGGCGCTGAC +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGKGPGR*ELPGAD
Trigger: GTCAGCGCCTGGCAGTTCCCAGCGCCCTGGGCCCTT...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCACAATCGGGCTGGCTaGGCCTCCTGTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGHNRAG*ASCEPL
Trigger: GAGGGGCTCACAGGAGGCCCAGCCAGCCCGATTGTG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTCAGCCGAGACCCGTTaGGTCCGGCCTCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRSAETR*VRPQES
Trigger: GCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTTCTGGTTACCAGGGGTaGTTTCTGGGCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPSGYQG*FLGSGT
Trigger: AGTCCCTGAGCCCAGAAATCACCCCTGGTAACCAGA...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTGATGCCTTCCGACTCTaGGGAGGATGGTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLDAFRL*GGWCIQ
Trigger: CTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATC...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGCAGGTGTGGGGCAGCTaGCCCACGTCTGTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRQVWGS*PTSVVN
Trigger: GTTCACCACAGACGTGGGTCAGCTGCCCCACACCTG...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTTCTCCTAGCTCAGGCTaGACACGCCTGGATTGTGTC +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPSPSSG*TRLDCV
Trigger: GACACAATCCAGGCGTGTTCAGCCTGAGCTAGGAGA...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATGGAAGACAGGTCGCTaGGTCCAGGCAAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAWKTGR*VQARGP
Trigger: GGGGCCCCTTGCCTGGACTCAGCGACCTGTCTTCCA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACATGGAAGACAGGTCGCTaGGTCCAGGCAAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTWKTGR*VQARGP
Trigger: GGGGCCCCTTGCCTGGACTCAGCGACCTGTCTTCCA...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTGGCTGGGCCTCCTGTaGGCCCCTCATTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGWLGLL*APHCIQ
Trigger: CTGGATGCAATGAGGGGCTCACAGGAGGCCCAGCCA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAATGGCTGGGCCTCCTGTaGGCCCCTCATTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQWLGLL*APHCIQ
Trigger: CTGGATGCAATGAGGGGCTCACAGGAGGCCCAGCCA...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCACTGGCATTCCCGCTaGTCCCCTTCCGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRHWHSR*SPSGSA
Trigger: AGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGCAGCAGCCACCGGCCTaGAGGATGTGTGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGQQPPA*RMCAEP
Trigger: GGGCTCAGCACACATCCTGCAGGCCGGTGGCTGCTG...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCAGCAGCCACCGGCCTaGAGGATGTGTGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVQQPPA*RMCAEP
Trigger: GGGCTCAGCACACATCCTGCAGGCCGGTGGCTGCTG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTCAGGGCGCTGGGAACTaGCAGGCGCTGACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRQGAGN*QALTLL
Trigger: AAGGAGAGTCAGCGCCTGGCAGTTCCCAGCGCCCTG...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAGGGGCCCCCGTAACTaGTTCCCGCCAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGRGPRN*FPPESP
Trigger: TGGGCTTTCTGGCGGGAAGCAGTTACGGGGGCCCCT...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGGGGCCCCCGTAACTaGTTCCCGCCAGAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRRGPRN*FPPESP
Trigger: TGGGCTTTCTGGCGGGAAGCAGTTACGGGGGCCCCT...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGAGGTGTGCCGCCAGCTaGACCCACATGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLRCAAS*THMHSP
Trigger: GGGGCTGTGCATGTGGGTGCAGCTGGCGGCACACCT...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTGAGCTCACCCGGTaGCTCAGCCGAGACCCGTTG +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTGELTR*LSRDPL
Trigger: CAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACC...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCATCGCAGGCACTCTTaGCAGGGAAGCAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGHRRHS*QGSRPA
Trigger: AGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGAGCCATCAGAGAGGCTaGCGACGCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELSHQRG*RRSLLC
Trigger: GCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCT...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGGYPRY*GGSSRH
Trigger: ATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTGTCGCTCGGTCGCTGTaGAGGGGTACCCCCGCTATT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGVARSL*RGTPAI
Trigger: AATAGCGGGGGTACCCCTCCACAGCGACCGAGCGAC...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACGTCGCTCGGTCGCTGTaGAGGGGTACCCCCGCTATT +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINVARSL*RGTPAI
Trigger: AATAGCGGGGGTACCCCTCCACAGCGACCGAGCGAC...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGAGGCTCACACGCTGTaGGGCAGCCCAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVREAHTL*GSPELL
Trigger: CAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTGAGGCTCACACGCTGTaGGGCAGCCCAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGEAHTL*GSPELL
Trigger: CAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTC...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGAGGCTCACACGCTGTaGGGCAGCCCAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGEAHTL*GSPELL
Trigger: CAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGACGGAAGCCCCGAGCTaGAGGCTCACACGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKTEAPS*RLTRCG
Trigger: CCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGT...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAACGGAAGCCCCGAGCTaGAGGCTCACACGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYATEAPS*RLTRCG
Trigger: CCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGT...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGACGGAAGCCCCGAGCTaGAGGCTCACACGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWTEAPS*RLTRCG
Trigger: CCCACAGCGTGTGAGCCTCCAGCTCGGGGCTTCCGT...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGATGTGGGAGGGGCCCTaGTGGGAGCTGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLMWEGP*WELWAT
Trigger: TGTGGCCCACAGCTCCCACCAGGGCCCCTCCCACAT...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAAGGCCACGGAGGGCAGTaGCTGCCCTCACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQGHGGQ*LPSQEE
Trigger: CTCTTCTTGTGAGGGCAGCCACTGCCCTCCGTGGCC...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTGGGCACAGGGGGCATaGACCCAGTACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRWAQGA*TQYLGR
Trigger: CCTCCCCAGGTACTGGGTCCATGCCCCCTGTGCCCA...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCAGCACCTGGGGAGGGTaGGCACAGGGGGCATGGACC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVSTWGG*AQGAWT
Trigger: GGTCCATGCCCCCTGTGCCCACCCTCCCCAGGTGCT...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGCACAATCGGGCTGGCTaGGCCTCCTGTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWHNRAG*ASCEPL
Trigger: GAGGGGCTCACAGGAGGCCCAGCCAGCCCGATTGTG...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGCACGGTGATGTGCTGTaGCCCAGGGGAGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGHGDVL*PRGGHP
Trigger: AGGGTGGCCTCCCCTGGGCCACAGCACATCACCGTG...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTCAGCCGAGACCCGTTaGGTCCGGCCTCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLSAETR*VRPQES
Trigger: GCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGA...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCAAGAGATCCTCCACTaGGCCAGGGGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGQEILH*ARGRAF
Trigger: GAAGGCTCTGCCCCTGGCTCAGTGGAGGATCTCTTG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCAAGAGATCCTCCACTaGGCCAGGGGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGQEILH*ARGRAF
Trigger: GAAGGCTCTGCCCCTGGCTCAGTGGAGGATCTCTTG...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCTTCTGGCCATCTGGTaGCCAGGTGTGCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVLLAIW*PGVPPA
Trigger: AGCTGGCGGCACACCTGGTCACCAGATGGCCAGAAG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCACATCTGGGCAGGGCTaGTGGGCAGCTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVTSGQG*WAASGH
Trigger: ATGGCCAGAAGCTGCCCATCAGCCCTGCCCAGATGT...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCCAGCGGCAGCAGCCTaGGCTCCCAGGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGPAAAA*APRLTS
Trigger: AGATGTCAGCCTGGGAGCTCAGGCTGCTGCCGCTGG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTCCGGGAGCGCTCTATaGTGGGGATGCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGSGSAL*WGCLPT
Trigger: AGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCGAAGCTTTACAGGGGTaGGTAGCTAATGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSEALQG*VANGVG
Trigger: ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGGGGGCAGCCCAGAGTTaGTGGAAGCTTTACAGGGGT +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPGAAQS*WKLYRG
Trigger: ACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCC...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCACAGGGCGCTGGGAACTaGCAGGCGCTGACTCTCCTT +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAQGAGN*QALTLL
Trigger: AAGGAGAGTCAGCGCCTGGCAGTTCCCAGCGCCCTG...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGCCCAGCCGCGTGAGTaGAGCAGCAGCACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESAQPRE*SSSTPA
Trigger: GGCTGGGGTGCTGCTGCTGCACTCACGCGGCTGGGC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAGTCTTGGAGGTCCTaGCTTGGCCACGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRESWRS*LGHGGQ
Trigger: CTGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTCTGGTGACCAGGTGTaGCGCCAGCTGCACCCACAT +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGSGDQV*RQLHPH
Trigger: ATGTGGGTGCAGCTGGCGGCACACCTGGTCACCAGA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGAGCTCACCCGGTaGCTCAGCCGAGACCCGTTG +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVGELTR*LSRDPL
Trigger: CAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRSLAIS*FGLGGE
Trigger: CTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTACCAGGGGTGATTTCTaGGCTCAGGGACTGATAGCC +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLTRGDF*AQGLIA
Trigger: GGCTATCAGTCCCTGAGCCCAGAAATCACCCCTGGT...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGGGAGCGCTCTATGCTaGGGATGCCTTCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRGSALC*GCLPTL
Trigger: CAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGCATCGCAGGCACTCTTaGCAGGGAAGCAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWHRRHS*QGSRPA
Trigger: AGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATG...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAAGCCATCAGAGAGGCTaGCGACGCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTSHQRG*RRSLLC
Trigger: GCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGAGCCATCAGAGAGGCTaGCGACGCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVSHQRG*RRSLLC
Trigger: GCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCT...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTGGACAGGGAAAGCTGTaGAGACGTGGTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLGQGKL*RRGSHS
Trigger: GCTATGGGAACCACGTCTCCACAGCTTTCCCTGTCC...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAGYPRY*GGSSRH
Trigger: ATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCC...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGGCAGCCCAGAGTTGCTaGAAGCTTTACAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPAAQSC*KLYRGA
Trigger: CGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGC...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCCACGGAGGGCAGTaGCTGCCCTCACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTGHGGQ*LPSQEE
Trigger: CTCTTCTTGTGAGGGCAGCCACTGCCCTCCGTGGCC...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGTTGGAGGTCCTGCCTTaGCCACGGAGGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGLEVLP*PRRAVA
Trigger: AGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAA...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTTGGAGGTCCTGCCTTaGCCACGGAGGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLLEVLP*PRRAVA
Trigger: AGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAA...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTAGCACCTGGGGAGGGTaGGCACAGGGGGCATGGACC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVASTWGG*AQGAWT
Trigger: GGTCCATGCCCCCTGTGCCCACCCTCCCCAGGTGCT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGATGAGGCACCAGGGCTaGGCTCGCATGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKMRHQG*ARMASK
Trigger: CTTGCTGGCCATGCGAGCCCAGCCCTGGTGCCTCAT...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGATGAGGCACCAGGGCTaGGCTCGCATGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRMRHQG*ARMASK
Trigger: CTTGCTGGCCATGCGAGCCCAGCCCTGGTGCCTCAT...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAATGAGGCACCAGGGCTaGGCTCGCATGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTMRHQG*ARMASK
Trigger: CTTGCTGGCCATGCGAGCCCAGCCCTGGTGCCTCAT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGTTTGGGCTGGGCGGTaGGCTCACCCGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESVWAGR*AHPVAQ
Trigger: CTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAAC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTGCCTCCCGTAGATGCTaGAGAGCTGTTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPASRRC*RAVFRF
Trigger: AAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGC...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACACAAGAGATCCTCCACTaGGCCAGGGGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTQEILH*ARGRAF
Trigger: GAAGGCTCTGCCCCTGGCTCAGTGGAGGATCTCTTG...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGCAAGAGATCCTCCACTaGGCCAGGGGCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWQEILH*ARGRAF
Trigger: GAAGGCTCTGCCCCTGGCTCAGTGGAGGATCTCTTG...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGCATCATCGCTCGATGTaGGGGGCTGGTAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRHHRSM*GAGRPH
Trigger: GTGAGGTCTACCAGCCCCTCACATCGAGCGATGATG...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGATGCCTTCCGACTCTaGGGAGGATGGTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRDAFRL*GGWCIQ
Trigger: CTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTATTCGCTCCATATGGTaGCTGCGTTCTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPIRSIW*LRSLSA
Trigger: GGCACTCAAAGAACGCAGTCACCATATGGAGCGAAT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCGCATCATTTCGGGTATaGGCCAGATCTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSASFRV*ARSSCK
Trigger: CTTGCAGGAAGATCTGGCTCATACCCGAAATGATGC...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGTCTGGAGATCAGCCTaGAACTGCCGCCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRVWRSA*NCRHSA
Trigger: TGCGGAATGGCGGCAGTTTCAGGCTGATCTCCAGAC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTCTGGAGATCAGCCTaGAACTGCCGCCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGVWRSA*NCRHSA
Trigger: TGCGGAATGGCGGCAGTTTCAGGCTGATCTCCAGAC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTTGTGCTGAGCCCACATaGCCTGAATGGACGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSCAEPT*PEWTGH
Trigger: ATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACA...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGAACTGCCAGGCGCTaGCTCTCCTTCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTGTARR*LSFWVL
Trigger: GAGAACCCAGAAGGAGAGTCAGCGCCTGGCAGTTCC...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGAACTGCCAGGCGCTaGCTCTCCTTCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRGTARR*LSFWVL
Trigger: GAGAACCCAGAAGGAGAGTCAGCGCCTGGCAGTTCC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCGGAACTGCCAGGCGCTaGCTCTCCTTCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSGTARR*LSFWVL
Trigger: GAGAACCCAGAAGGAGAGTCAGCGCCTGGCAGTTCC...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTCTCAGTGAGTTTAAATaGCACTGCCTGGGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPLSEFK*HCLGSL
Trigger: TAGGGAGCCCAGGCAGTGTCATTTAAACTCACTGAG...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCCCTGAGCTCCCAGGCTaGCATCTGGGCAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGPELPG*HLGRAD
Trigger: ATCAGCCCTGCCCAGATGTCAGCCTGGGAGCTCAGG...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGTTGGGAAGGTTGAAGTaGGAGGATCGCTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPLGRLK*EDRLSP
Trigger: CGGGCTCAAGCGATCCTCTCACTTCAACCTTCCCAA...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCGGAACGTTTGGCCAATaGCATGTCATTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSGTFGQ*HVISSL
Trigger: CAGGGAGCTAATGACATGGCATTGGCCAAACGTTCC...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGGCTCTATGCTGGGGATaGCTTCCGACTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELALCWG*LPTLRR
Trigger: CCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGC...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTGCTCTATGCTGGGGATaGCTTCCGACTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGALCWG*LPTLRR
Trigger: CCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGC...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCCGGGAGCGCTCTATaGTGGGGATGCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSSGSAL*WGCLPT
Trigger: AGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCACTGGCATTCCCGCTaGTCCCCTTCCGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAHWHSR*SPSGSA
Trigger: AGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCAAATCAGCTAGCTCTTaGAGGGTTGCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSKSASS*RVAWSS
Trigger: GGAACTCCAGGCAACCCTGCAAGAGCTAGCTGATTT...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTTCGAGGAATTGCAGCTaGAGCAGGGTTTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPSRNCS*SRVWYL
Trigger: CAAGTACCAAACCCTGCTGCAGCTGCAATTCCTCGA...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGGGCGTTCGAGGAATTaGAGCTGCAGCAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGGRSRN*SCSRVW
Trigger: CCAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCCAATAGTCAGGAAGTaGCGCGGCCGAGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGPIVRK*RGRAFI
Trigger: GATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTTGGTCTTCCTCATGGTaGTATGCAGGTGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPWSSSW*YAGAKH
Trigger: GTGTTTGGCACCTGCATAGCACCATGAGGAAGACCA...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCCTCCTGGTCAGGATCTaGCCACATGAGGAAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVLLVRI*PHEEVR
Trigger: GCGCACTTCCTCATGTGGGCAGATCCTGACCAGGAG...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR GCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAACAAGCAAATCGCGCTaGACCGCATCGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTTSKSR*TASLPR
Trigger: GCGAGGGAGCGATGCGGTGCAGCGCGATTTGCTTGT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437398.5
ENST00000541492.1
CDS-3UTR GCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGACAAGCAAATCGCGCTaGACCGCATCGCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLTSKSR*TASLPR
Trigger: GCGAGGGAGCGATGCGGTGCAGCGCGATTTGCTTGT...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRSLAIS*FGLGGE
Trigger: CTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGA...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCAGCCATCAGAGAGGCTaGCGACGCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGSHQRG*RRSLLC
Trigger: GCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCT...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTGGACAGGGAAAGCTGTaGAGACGTGGTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSGQGKL*RRGSHS
Trigger: GCTATGGGAACCACGTCTCCACAGCTTTCCCTGTCC...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGGTCGCTCGGTCGCTGTaGAGGGGTACCCCCGCTATT +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARVARSL*RGTPAI
Trigger: AATAGCGGGGGTACCCCTCCACAGCGACCGAGCGAC...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCAGGCTGAACACGCCTaGATTGTGTCGGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRQAEHA*IVSAGT
Trigger: TGTCCCGGCCGACACAATCCAGGCGTGTTCAGCCTG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGCCCCGCTTCCACTGGTaGCTGGTCTTCCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLPRFHW*LVFLMV
Trigger: CACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGG...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTAGGGCTGGGCTCGCATaGCCAGCAAGGGATAAAGTT +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSRAGLA*PARDKV
Trigger: AACTTTATCCCTTGCTGGCCATGCGAGCCCAGCCCT...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGCAGGGGAGGCCACCCTaGACTCCTGGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARQGRPP*TPGQDL
Trigger: CAGATCCTGACCAGGAGTCCAGGGTGGCCTCCCCTG...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGCTCTGCCACGGTCTCTaGGGTCTTGGCATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELLCHGL*GLGICH
Trigger: GTGACAGATGCCAAGACCCCAGAGACCGTGGCAGAG...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
3UTR CAA 72 bp GAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTaGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGC +
Preference number: 4 (lower is better)
Translates to: ELEAHTLWGSPE*LEALQGCVANG
Trigger: GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTAGACACTTTAGGCACTaGGCCAACACTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSRHFRH*ANTPAC
Trigger: GCAAGCAGGAGTGTTGGCTCAGTGCCTAAAGTGTCT...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTTCATCACCCTCAGAATaGTCCTCATTAATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPSSPSE*SSLMPS
Trigger: GCTGGGCATTAATGAGGATCATTCTGAGGGTGATGA...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTCTGGTTACCAGGGGTaGTTTCTGGGCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGSGYQG*FLGSGT
Trigger: AGTCCCTGAGCCCAGAAATCACCCCTGGTAACCAGA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGCAGAGCCTTCCACTaGAGAAGTCAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRGRAFH*RSQSSS
Trigger: GGAGGAACTCTGACTTCTTCAGTGGAAGGCTCTGCC...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGGATGCCTTCCGACTCTaGGGAGGATGGTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWDAFRL*GGWCIQ
Trigger: CTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATC...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCGTCTGGAGATCAGCCTaGAACTGCCGCCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSVWRSA*NCRHSA
Trigger: TGCGGAATGGCGGCAGTTTCAGGCTGATCTCCAGAC...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGTGTAGGAGTTGGCTCTaGGGAAGTCGAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPCRSWL*GSRGPS
Trigger: AGAAGGTCCTCGACTTCCTCAGAGCCAACTCCTACA...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTCAGGGGTTTGGATGTTaGGATTGGTCCACTTATGGA +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPQGFGC*DWSTYG
Trigger: TCCATAAGTGGACCAATCTCAACATCCAAACCCCTG...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCAGGTGTGGGGCAGCTaGCCCACGTCTGTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAQVWGS*PTSVVN
Trigger: GTTCACCACAGACGTGGGTCAGCTGCCCCACACCTG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTCTCCTAGCTCAGGCTaGACACGCCTGGATTGTGTC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRSPSSG*TRLDCV
Trigger: GACACAATCCAGGCGTGTTCAGCCTGAGCTAGGAGA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGAGTGAGAGGATCGCTTaGGCCCGGGAGGTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRSERIA*AREVKA
Trigger: AGCTTTGACCTCCCGGGCTCAAGCGATCCTCTCACT...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTGGAACGTTTGGCCAATaGCATGTCATTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLGTFGQ*HVISSL
Trigger: CAGGGAGCTAATGACATGGCATTGGCCAAACGTTCC...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCGCTCTATGCTGGGGATaGCTTCCGACTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSALCWG*LPTLRR
Trigger: CCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGC...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCGCTCCTCCTCTTGCTTaGGTGACTTTATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSAPPLA*VTLFPP
Trigger: TGGAGGAAATAAAGTCACGCAAGCAAGAGGAGGAGC...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTCGAGGAATTGCAGCTaGAGCAGGGTTTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLSRNCS*SRVWYL
Trigger: CAAGTACCAAACCCTGCTGCAGCTGCAATTCCTCGA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGGGGCGTTCGAGGAATTaGAGCTGCAGCAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLGRSRN*SCSRVW
Trigger: CCAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCC...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGGTGGGAGTCACAGATaGCGTTGGAGAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGGGSHR*RWRRGQ
Trigger: CTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCCAATAGTCAGGAAGTaGCGCGGCCGAGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAPIVRK*RGRAFI
Trigger: GATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGG...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTCTCCCTTGCAGCTCTaGACGCAAACCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRSPLQL*TQTFPK
Trigger: CTTGGGGAAGGTTTGCGTGCAGAGCTGCAAGGGAGA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGTCTCCCTTGCAGCTCTaGACGCAAACCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELSPLQL*TQTFPK
Trigger: CTTGGGGAAGGTTTGCGTGCAGAGCTGCAAGGGAGA...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACACTCCTGGTCAGGATCTaGCCACATGAGGAAGTGCGC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTLLVRI*PHEEVR
Trigger: GCGCACTTCCTCATGTGGGCAGATCCTGACCAGGAG...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTGCAACTGCAATAAAGTaGACTCCACATCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPATAIK*TPHQSA
Trigger: AGCCGACTGATGTGGAGTCCACTTTATTGCAGTTGC...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCACCAGGGGTGATTTCTaGGCTCAGGGACTGATAGCC +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVTRGDF*AQGLIA
Trigger: GGCTATCAGTCCCTGAGCCCAGAAATCACCCCTGGT...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTACCAGGGGTGATTTCTaGGCTCAGGGACTGATAGCC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGTRGDF*AQGLIA
Trigger: GGCTATCAGTCCCTGAGCCCAGAAATCACCCCTGGT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTCCTCCTCCATCGCTCTaGTTACCAGGGGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSPPPSL*LPGVIS
Trigger: AGAAATCACCCCTGGTAACCAGAGCGATGGAGGAGG...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGGGGAGCGCTCTATGCTaGGGATGCCTTCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARGSALC*GCLPTL
Trigger: CAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCC...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTAGCTGCAGCAGGGTTTaGTACTTGAGATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLSCSRV*YLRCTV
Trigger: GACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCT...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGGTTTTCATAGGACTTaGGCTCAGGGGCGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGGFHRT*AQGRSR
Trigger: CCTCGAACGCCCCTGAGCCCAAGTCCTATGAAAACC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCGGTTTTCATAGGACTTaGGCTCAGGGGCGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVGFHRT*AQGRSR
Trigger: CCTCGAACGCCCCTGAGCCCAAGTCCTATGAAAACC...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTTCGGCTTCGGGTGGTaGGAGTCACAGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLFGFGW*ESQMPL
Trigger: CAACGGCATCTGTGACTCCCACCACCCGAAGCCGAA...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTTATTCGGCTTCGGGTaGTGGGAGTCACAGATGCCG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGLFGFG*WESQMP
Trigger: CGGCATCTGTGACTCCCACCACCCGAAGCCGAATAA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGTTATTCGGCTTCGGGTaGTGGGAGTCACAGATGCCG +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELLFGFG*WESQMP
Trigger: CGGCATCTGTGACTCCCACCACCCGAAGCCGAATAA...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGCAGCCCAGAGTTGCTaGAAGCTTTACAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAAAQSC*KLYRGA
Trigger: CGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCAGGCTGAACACGCCTaGATTGTGTCGGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGQAEHA*IVSAGT
Trigger: TGTCCCGGCCGACACAATCCAGGCGTGTTCAGCCTG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTCAACCACTGAGTCTTaGAGGTCCTGCCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRSTTES*RSCLGH
Trigger: GTGGCCAAGGCAGGACCTCCAAGACTCAGTGGTTGA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTGGGCACAGGGGGCATaGACCCAGTACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESWAQGA*TQYLGR
Trigger: CCTCCCCAGGTACTGGGTCCATGCCCCCTGTGCCCA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTTGGTTCAAACAGCATaGACCCAGCACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGLVQTA*TQHLGR
Trigger: CCTCCCCAGGTGCTGGGTCCATGCTGTTTGAACCAA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTTGGTTCAAACAGCATaGACCCAGCACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRLVQTA*TQHLGR
Trigger: CCTCCCCAGGTGCTGGGTCCATGCTGTTTGAACCAA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAATTGCATCCAGTCTGTaGGGCAGTGACCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAIASSL*GSDPAS
Trigger: GGAAGCGGGGTCACTGCCCCACAGACTGGATGCAAT...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAGGGCTGGGCTCGCATaGCCAGCAAGGGATAAAGTT +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGRAGLA*PARDKV
Trigger: AACTTTATCCCTTGCTGGCCATGCGAGCCCAGCCCT...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGTCCCAGGAGGGAGCTaGGTTCTGGTTTATGCGACG +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAVPGGS*VLVYAT
Trigger: CGTCGCATAAACCAGAACCCAGCTCCCTCCTGGGAC...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCAGGGGAGGCCACCCTaGACTCCTGGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAQGRPP*TPGQDL
Trigger: CAGATCCTGACCAGGAGTCCAGGGTGGCCTCCCCTG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACCGGTCTCTGGGGTCTTaGCATCTGTCACAGAACCCT +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINRSLGS*HLSQNP
Trigger: AGGGTTCTGTGACAGATGCCAAGACCCCAGAGACCG...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTAGACACTTTAGGCACTaGGCCAACACTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGRHFRH*ANTPAC
Trigger: GCAAGCAGGAGTGTTGGCTCAGTGCCTAAAGTGTCT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGTCTGGTTACCAGGGGTaGTTTCTGGGCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKSGYQG*FLGSGT
Trigger: AGTCCCTGAGCCCAGAAATCACCCCTGGTAACCAGA...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCATCATCGCTCGATGTaGGGGGCTGGTAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGHHRSM*GAGRPH
Trigger: GTGAGGTCTACCAGCCCCTCACATCGAGCGATGATG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGATGCCTTCCGACTCTaGGGAGGATGGTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVDAFRL*GGWCIQ
Trigger: CTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTCTCCTCTTGCTTGCGTaGCTTTATTTCCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPLLLLA*LYFLQF
Trigger: GAATTGGAGGAAATAAAGTCACGCAAGCAAGAGGAG...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTGTAGGAGTTGGCTCTaGGGAAGTCGAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGCRSWL*GSRGPS
Trigger: AGAAGGTCCTCGACTTCCTCAGAGCCAACTCCTACA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTTGGCTGTTCAGTTCTTaGTATGGAATGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSWLFSS*YGMWAG
Trigger: CCCTGCCCACATTCCATATCAAGAACTGAACAGCCA...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTGTGGGCCACACGGCTaGGTTCTTCCAATACGGAAG +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWCGPHG*VLPIRK
Trigger: CTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATGTGGGCCACACGGCTaGGTTCTTCCAATACGGAAG +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYACGPHG*VLPIRK
Trigger: CTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGGTCTGCGGGGGTCTCTaGTATGCTTTGTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVVCGGL*YALWHD
Trigger: GTCATGCCACAAAGCATATCAGAGACCCCCGCAGAC...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACATGTCATTAGCTCCCTaGCCTGTAGAAGTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINMSLAP*PVEVLR
Trigger: GCGGAGCACTTCTACAGGTCAGGGAGCTAATGACAT...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACACTGGCATTCCCGCTaGTCCCCTTCCGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRHWHSR*SPSGSA
Trigger: AGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGTGGACACCAAGAAGCTaGTCCCGTTCAAAACGGGCA +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELWTPRS*SRSKRA
Trigger: TGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCA...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTGGACACCAAGAAGCTaGTCCCGTTCAAAACGGGCA +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRWTPRS*SRSKRA
Trigger: TGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGCGTGGCTGCCAAGGCTaGTTTTCCTTTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELRGCQG*FSFLLR
Trigger: TCTGAGCAGAAAGGAAAAGCAGCCTTGGCAGCCACG...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTCGTGGCTGCCAAGGCTaGTTTTCCTTTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRRGCQG*FSFLLR
Trigger: TCTGAGCAGAAAGGAAAAGCAGCCTTGGCAGCCACG...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGCGTGGCTGCCAAGGCTaGTTTTCCTTTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRRGCQG*FSFLLR
Trigger: TCTGAGCAGAAAGGAAAAGCAGCCTTGGCAGCCACG...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTATTTGCAATGACTACTaGAGTCTGGAGATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPICNDY*SLEISL
Trigger: CAGGCTGATCTCCAGACTGCAGTAGTCATTGCAAAT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGGGCGTTCGAGGAATTaGAGCTGCAGCAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGGRSRN*SCSRVW
Trigger: CCAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGGCGTTCGAGGAATTaGAGCTGCAGCAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVGRSRN*SCSRVW
Trigger: CCAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCGACGCTCCCTCCTGTaGAGAAATGTCCCGTTTCAC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVRRSLL*RNVPFH
Trigger: GTGAAACGGGACATTTCTGCACAGGAGGGAGCGTCG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCCGACGCTCCCTCCTGTaGAGAAATGTCCCGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSRRSLL*RNVPFH
Trigger: GTGAAACGGGACATTTCTGCACAGGAGGGAGCGTCG...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCACGACGCTCCCTCCTGTaGAGAAATGTCCCGTTTCAC +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYARRSLL*RNVPFH
Trigger: GTGAAACGGGACATTTCTGCACAGGAGGGAGCGTCG...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGGGTGGGAGTCACAGATaGCGTTGGAGAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVGGSHR*RWRRGQ
Trigger: CTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACC...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTGGGAGTCACAGATaGCGTTGGAGAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTGGSHR*RWRRGQ
Trigger: CTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACC...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTACAGCATCACGTTCTaGCAGTCGGGTCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRYSITF*QSGRSV
Trigger: GACTGAACGACCCGACTGGCAGAACGTGATGCTGTA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCACGGCTCCTCCCGGCATaGTCAGGTCTCAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYARLLPA*SGLKVL
Trigger: AAGTACTTTGAGACCTGAGCATGCCGGGAGGAGCCG...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCGGCTCCTCCCGGCATaGTCAGGTCTCAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVARLLPA*SGLKVL
Trigger: AAGTACTTTGAGACCTGAGCATGCCGGGAGGAGCCG...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGGGCAGCCCAGAGTTaGTGGAAGCTTTACAGGGGT +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVGAAQS*WKLYRG
Trigger: ACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTCAAACCAATAGCTACTaGGTTAGGCACACGGGAGAT +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLQTNSY*VRHTGD
Trigger: ATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTG...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCAACATCAGTGGCTCATaGCAACAGCAGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVNISGS*QQQSWP
Trigger: TGGCCAGCTCTGCTGTTGGCATGAGCCACTGATGTT...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGGATAAAGTTGGGAACTaGAGACCAGGGGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKDKVGN*RPGEAP
Trigger: GGGGGCTTCCCCTGGTCTGCAGTTCCCAACTTTATC...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCTCCCTTGCAGCTCTaGACGCAAACCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSSPLQL*TQTFPK
Trigger: CTTGGGGAAGGTTTGCGTGCAGAGCTGCAAGGGAGA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTGGAACCCTCTCCCTTaGAGCTCTGCACGCAAACCT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRWNPLP*SSARKP
Trigger: AGGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCA...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGCGAGGCAAAAGGCAATaGTTCTGGAACCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRRGKRQ*FWNPLP
Trigger: AGGGAGAGGGTTCCAGAAGCATTGCCTTTTGCCTCG...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCTGGGTTCTGGTTTATaGGACGTCAGAGGGACGGCA +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVALGSGL*DVRGTA
Trigger: TGCCGTCCCTCTGACGTCGCATAAACCAGAACCCAG...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR GCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGCTGGGTTCTGGTTTATaGGACGTCAGAGGGACGGCA +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGLGSGL*DVRGTA
Trigger: TGCCGTCCCTCTGACGTCGCATAAACCAGAACCCAG...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTCATTAATGCCCAGCTaGGCACGCATGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGSLMPS*ARMSRS
Trigger: ACTGCGAGACATGCGTGCCCAGCTGGGCATTAATGA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCCTCCTCCATCGCTCTaGTTACCAGGGGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGPPPSL*LPGVIS
Trigger: AGAAATCACCCCTGGTAACCAGAGCGATGGAGGAGG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGGGTTTTCATAGGACTTaGGCTCAGGGGCGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKGFHRT*AQGRSR
Trigger: CCTCGAACGCCCCTGAGCCCAAGTCCTATGAAAACC...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGGGGCTGTCAGGGGTTTaGATGTTGAGATTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELGLSGV*MLRLVH
Trigger: GTGGACCAATCTCAACATCCAAACCCCTGACAGCCC...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGGGCTGTCAGGGGTTTaGATGTTGAGATTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRGLSGV*MLRLVH
Trigger: GTGGACCAATCTCAACATCCAAACCCCTGACAGCCC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGGGAAGCAGGCCGGCTaGCTGAAGATGTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRGKQAG*LKMFLT
Trigger: TGTTAAGAACATCTTCAGCCAGCCGGCCTGCTTCCC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTACACTGAGAGGGTCTTaGCACTTTCCATCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGTLRGS*HFPSQA
Trigger: TGCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGGACAGGGAAAGCTGTaGAGACGTGGTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAGQGKL*RRGSHS
Trigger: GCTATGGGAACCACGTCTCCACAGCTTTCCCTGTCC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTTCGGCTTCGGGTGGTaGGAGTCACAGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARFGFGW*ESQMPL
Trigger: CAACGGCATCTGTGACTCCCACCACCCGAAGCCGAA...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTTATTCGGCTTCGGGTaGTGGGAGTCACAGATGCCG +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRLFGFG*WESQMP
Trigger: CGGCATCTGTGACTCCCACCACCCGAAGCCGAATAA...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTATCCTCCATATTCTCTaGCCAATGCTGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLILHIL*PMLREG
Trigger: ACCCTCTCTCAGCATTGGCCAGAGAATATGGAGGAT...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGGCAGCCCAGAGTTGCTaGAAGCTTTACAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARAAQSC*KLYRGA
Trigger: CGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGC...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTTGGAGGTCCTGCCTTaGCCACGGAGGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESLEVLP*PRRAVA
Trigger: AGCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTCAACCACTGAGTCTTaGAGGTCCTGCCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRSTTES*RSCLGH
Trigger: GTGGCCAAGGCAGGACCTCCAAGACTCAGTGGTTGA...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGTCAACCACTGAGTCTTaGAGGTCCTGCCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVSTTES*RSCLGH
Trigger: GTGGCCAAGGCAGGACCTCCAAGACTCAGTGGTTGA...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATTGGTTCAAACAGCATaGACCCAGCACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYALVQTA*TQHLGR
Trigger: CCTCCCCAGGTGCTGGGTCCATGCTGTTTGAACCAA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGGGCTGGTCTTCCTCATaGTGCTATGCAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELGWSSS*CYAGAK
Trigger: TTTGGCACCTGCATAGCACCATGAGGAAGACCAGCC...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGCTTCCACTGGTGGCTaGTCTTCCTCATGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGASTGG*SSSWCY
Trigger: ATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCCCCGCTTCCACTGGTaGCTGGTCTTCCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAPRFHW*LVFLMV
Trigger: CACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGATTGCATCCAGTCTGTaGGGCAGTGACCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARIASSL*GSDPAS
Trigger: GGAAGCGGGGTCACTGCCCCACAGACTGGATGCAAT...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTGCCAACAGCAGAGCTaGCCATCAACAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRCQQQS*PSTEEQ
Trigger: CTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGGGCAAAGTGGCTTCTTaGAGACTTCGTGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELGKVAS*RLRARC
Trigger: GCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCC...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCGAGGGAGCTGGGTTCTaGTTTATGCGACGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSEGAGF*FMRRQR
Trigger: CCTCTGACGTCGCATAAACCAGAACCCAGCTCCCTC...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAAGACACTTTAGGCACTaGGCCAACACTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTRHFRH*ANTPAC
Trigger: GCAAGCAGGAGTGTTGGCTCAGTGCCTAAAGTGTCT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTACTGATCTGATTGTCTaGCTTAGACTTGCTCATACG +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPTDLIV*LRLAHT
Trigger: CGTATGAGCAAGTCTAAGTCAGACAATCAGATCAGT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGTGGTTTTTGCCAGCGTaGGAAGATCCTTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPWFLPA*EDPSLW
Trigger: CCAAAGTGAAGGATCTTCTCACGCTGGCAAAAACCA...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGGCAGAGCCTTCCACTaGAGAAGTCAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGGRAFH*RSQSSS
Trigger: GGAGGAACTCTGACTTCTTCAGTGGAAGGCTCTGCC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTAGTGTATTTTCATCCTaGCTCAAGAGATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPSVFSS*LKRSST
Trigger: AGTGGAGGATCTCTTGAGTCAGGATGAAAATACACT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGGGTGACTGCGTTCTTTaGGTGCCCCTATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPGDCVL*VPLSFL
Trigger: AAGAAATGATAGGGGCACTCAAAGAACGCAGTCACC...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTATTCGCTCCATATGGTaGCTGCGTTCTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGIRSIW*LRSLSA
Trigger: GGCACTCAAAGAACGCAGTCACCATATGGAGCGAAT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTCTCTCCAGGAGGTCCTaGATATCAGATTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSLSRRS*ISDLSP
Trigger: TGGAGACAAATCTGATATTCAGGACCTCCTGGAGAG...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTTTCTTTGTCCAGCCTaGCACTCTCCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWFLCPA*HSPGGP
Trigger: AGGACCTCCTGGAGAGTGTCAGGCTGGACAAAGAAA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGTGTAGGAGTTGGCTCTaGGGAAGTCGAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKCRSWL*GSRGPS
Trigger: AGAAGGTCCTCGACTTCCTCAGAGCCAACTCCTACA...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGTTTGGTCTCTTATCTaGCAGGGCTGTCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRVWSLI*QGCQGF
Trigger: AAACCCCTGACAGCCCTGTCAGATAAGAGACCAAAC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTGTTTGGTCTCTTATCTaGCAGGGCTGTCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGVWSLI*QGCQGF
Trigger: AAACCCCTGACAGCCCTGTCAGATAAGAGACCAAAC...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGCAAGGCGTTCCTCTTTaGTCCTCCATATTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELQGVPL*SSIFSG
Trigger: GCCAGAGAATATGGAGGATCAAAGAGGAACGCCTTG...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACTGTCCAGTGTGGATTTaGTGCCGACACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINCPVWI*CRHFQL
Trigger: CAGCTGAAAGTGTCGGCATCAAATCCACACTGGACA...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAATGTCCAGTGTGGATTTaGTGCCGACACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQCPVWI*CRHFQL
Trigger: CAGCTGAAAGTGTCGGCATCAAATCCACACTGGACA...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTTGTGGGCCACACGGCTaGGTTCTTCCAATACGGAAG +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGCGPHG*VLPIRK
Trigger: CTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACA...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCTGTGCTGAGCCCACATaGCCTGAATGGACGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGCAEPT*PEWTGH
Trigger: ATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACA...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCAGACCCACGTCTGTGGTaGACATGCTCCTCCAAACTA +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPDPRLW*TCSSKL
Trigger: TAGTTTGGAGGAGCATGTTCACCACAGACGTGGGTC...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGGACCCACGTCTGTGGTaGACATGCTCCTCCAAACTA +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGDPRLW*TCSSKL
Trigger: TAGTTTGGAGGAGCATGTTCACCACAGACGTGGGTC...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCTCTCCTAGCTCAGGCTaGACACGCCTGGATTGTGTC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVSPSSG*TRLDCV
Trigger: GACACAATCCAGGCGTGTTCAGCCTGAGCTAGGAGA...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCAAGACAACTCAACCACTaGGTCTTGGAGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPRQLNH*VLEVLP
Trigger: AGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCT...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGAGACAACTCAACCACTaGGTCTTGGAGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVRQLNH*VLEVLP
Trigger: AGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCT...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAAGACAACTCAACCACTaGGTCTTGGAGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTRQLNH*VLEVLP
Trigger: AGGCAGGACCTCCAAGACTCAGTGGTTGAGTTGTCT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGCTAGAACATCGTGCTTaGATGCAGACCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARLEHRA*MQTPQP
Trigger: GGGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAG...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACTTCTGGCCATCTGGTaGCCAGGTGTGCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRLLAIW*PGVPPA
Trigger: AGCTGGCGGCACACCTGGTCACCAGATGGCCAGAAG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCACATCTGGGCAGGGCTaGTGGGCAGCTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESTSGQG*WAASGH
Trigger: ATGGCCAGAAGCTGCCCATCAGCCCTGCCCAGATGT...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACCTGAGCTCCCAGGCTaGCATCTGGGCAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRPELPG*HLGRAD
Trigger: ATCAGCCCTGCCCAGATGTCAGCCTGGGAGCTCAGG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATATGCTTTGTGGCATaGCTTTGCTTGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVICFVA*LCLPGL
Trigger: GAGGCCAGGCAAGCAAAGTCATGCCACAAAGCATAT...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTATATGCTTTGTGGCATaGCTTTGCTTGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGICFVA*LCLPGL
Trigger: GAGGCCAGGCAAGCAAAGTCATGCCACAAAGCATAT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAGCAAAAGTGGGAACTaGGGACACCTAAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGSKSGN*GHLSGE
Trigger: CTCTCCACTTAGGTGTCCTCAGTTCCCACTTTTGCT...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTAGTAAAGCTTGTGCTTaGAGGGAGAAGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLSKACA*REKRQS
Trigger: ACTTTGCCTCTTCTCCCTTCAAGCACAAGCTTTACT...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGAACGTTTGGCCAATaGCATGTCATTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRGTFGQ*HVISSL
Trigger: CAGGGAGCTAATGACATGGCATTGGCCAAACGTTCC...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCTTCTGTTCCTGCAACTaGAATAAAGTGGACTCCACA +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSFCSCN*NKVDST
Trigger: TGTGGAGTCCACTTTATTGCAGTTGCAGGAACAGAA...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCGCAGTATTCTGTTCCTaGAACTGCAATAAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSAVFCS*NCNKVD
Trigger: GTCCACTTTATTGCAGTTGCAGGAACAGAATACTGC...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCAGTTCCTGGGTAATCTaGTGTAAATCAGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSSSWVI*CKSASS
Trigger: AGAGCTAGCTGATTTACAGCAGATTACCCAGGAACT...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGGACACCAAGAAGCTaGTCCCGTTCAAAACGGGCA +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSWTPRS*SRSKRA
Trigger: TGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTGGACACCAAGAAGCTaGTCCCGTTCAAAACGGGCA +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAWTPRS*SRSKRA
Trigger: TGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCA...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGCCTCGCTCCTCCTCTTaGTTGCGTGACTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELPRSSS*LRDFIS
Trigger: GGAAATAAAGTCACGCAAGCAAGAGGAGGAGCGAGG...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCTCAGTCCCATTCCCTaGCTTAAGGCTGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGLSPIP*LKAAKS
Trigger: AGATTTGGCAGCCTTAAGGCAGGGAATGGGACTGAG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCTCGAGGAATTGCAGCTaGAGCAGGGTTTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVSRNCS*SRVWYL
Trigger: CAAGTACCAAACCCTGCTGCAGCTGCAATTCCTCGA...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGGCCGACACTTTCAGCTaGCTGGAAAGCCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWADTFS*LESQHE
Trigger: TTCATGCTGGCTTTCCAGGCAGCTGAAAGTGTCGGC...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGCCGACACTTTCAGCTaGCTGGAAAGCCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAADTFS*LESQHE
Trigger: TTCATGCTGGCTTTCCAGGCAGCTGAAAGTGTCGGC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATACAGCATCACGTTCTaGCAGTCGGGTCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAYSITF*QSGRSV
Trigger: GACTGAACGACCCGACTGGCAGAACGTGATGCTGTA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCCGGCTCCTCCCGGCATaGTCAGGTCTCAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVRLLPA*SGLKVL
Trigger: AAGTACTTTGAGACCTGAGCATGCCGGGAGGAGCCG...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCCGGCTCCTCCCGGCATaGTCAGGTCTCAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGRLLPA*SGLKVL
Trigger: AAGTACTTTGAGACCTGAGCATGCCGGGAGGAGCCG...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAAGCTTTACAGGGGTaGGTAGCTAATGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYREALQG*VANGVG
Trigger: ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCTCCCAAATTCAGCTGTaGATGAGCCCTTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: APVTASRQKAQPRECSSSSQIQL*MSPFCL
Trigger: CAAACAAAAAGGGCTCATGCACAGCTGAATTTGGGA...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGAGTCTTGGAGGTCCTaGCTTGGCCACGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRESWRS*LGHGGQ
Trigger: CTGCCCTCCGTGGCCAAGGCAGGACCTCCAAGACTC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAATGGTCTTCCTCATGGTaGTATGCAGGTGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQWSSSW*YAGAKH
Trigger: GTGTTTGGCACCTGCATAGCACCATGAGGAAGACCA...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTCTGGTGACCAGGTGTaGCGCCAGCTGCACCCACAT +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESSGDQV*RQLHPH
Trigger: ATGTGGGTGCAGCTGGCGGCACACCTGGTCACCAGA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCAACATCAGTGGCTCATaGCAACAGCAGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSNISGS*QQQSWP
Trigger: TGGCCAGCTCTGCTGTTGGCATGAGCCACTGATGTT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGATAAAGTTGGGAACTaGAGACCAGGGGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGDKVGN*RPGEAP
Trigger: GGGGGCTTCCCCTGGTCTGCAGTTCCCAACTTTATC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCGAGGCAAAAGGCAATaGTTCTGGAACCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRRGKRQ*FWNPLP
Trigger: AGGGAGAGGGTTCCAGAAGCATTGCCTTTTGCCTCG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCAAGACTTCGTGCCAGATaGCACAGGACTGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPRLRAR*HRTESI
Trigger: GATGCTCTCAGTCCTGTGGCATCTGGCACGAAGTCT...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGAGACTTCGTGCCAGATaGCACAGGACTGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVRLRAR*HRTESI
Trigger: GATGCTCTCAGTCCTGTGGCATCTGGCACGAAGTCT...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGAGACTTCGTGCCAGATaGCACAGGACTGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGRLRAR*HRTESI
Trigger: GATGCTCTCAGTCCTGTGGCATCTGGCACGAAGTCT...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESSLAIS*FGLGGE
Trigger: CTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATCATTAATGCCCAGCTaGGCACGCATGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYASLMPS*ARMSRS
Trigger: ACTGCGAGACATGCGTGCCCAGCTGGGCATTAATGA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCATCATTAATGCCCAGCTaGGCACGCATGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPSLMPS*ARMSRS
Trigger: ACTGCGAGACATGCGTGCCCAGCTGGGCATTAATGA...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGCCTCCTCCATCGCTCTaGTTACCAGGGGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKPPPSL*LPGVIS
Trigger: AGAAATCACCCCTGGTAACCAGAGCGATGGAGGAGG...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGTCTTGCAGGGTTGCCTaGAGTTCCTCACTTGTACTG +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELSCRVA*SSSLVL
Trigger: CAGTACAAGTGAGGAACTCCAGGCAACCCTGCAAGA...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACGGTCACTGGCCACTGTaGCTTTGTATTCCTCTAACG +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINGHWPL*LCIPLT
Trigger: CGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACC...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTCGATTCATCTCTATCTaGTCACTGGCCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRRFISI*SLATVA
Trigger: AGCCACAGTGGCCAGTGACCAGATAGAGATGAATCG...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCGATTCATCTCTATCTaGTCACTGGCCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGRFISI*SLATVA
Trigger: AGCCACAGTGGCCAGTGACCAGATAGAGATGAATCG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCAGCTGCAGCAGGGTTTaGTACTTGAGATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVSCSRV*YLRCTV
Trigger: GACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCT...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGGGGAAGCAGGCCGGCTaGCTGAAGATGTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGGKQAG*LKMFLT
Trigger: TGTTAAGAACATCTTCAGCCAGCCGGCCTGCTTCCC...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGGAAGCAGGCCGGCTaGCTGAAGATGTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRGKQAG*LKMFLT
Trigger: TGTTAAGAACATCTTCAGCCAGCCGGCCTGCTTCCC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTACACTGAGAGGGTCTTaGCACTTTCCATCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVATLRGS*HFPSQA
Trigger: TGCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGT...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGACACTGAGAGGGTCTTaGCACTTTCCATCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWTLRGS*HFPSQA
Trigger: TGCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGT...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTTATTCGGCTTCGGGTaGTGGGAGTCACAGATGCCG +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARLFGFG*WESQMP
Trigger: CGGCATCTGTGACTCCCACCACCCGAAGCCGAATAA...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACAAGCACCTGGGGAGGGTaGGCACAGGGGGCATGGACC +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTSTWGG*AQGAWT
Trigger: GGTCCATGCCCCCTGTGCCCACCCTCCCCAGGTGCT...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTATAGCTGTTGAGTTCTaGCCTGAGAGCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSIAVEF*PESISS
Trigger: ACTGGAGATGCTCTCAGGCCAGAACTCAACAGCTAT...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCTGGTCTTCCTCATaGTGCTATGCAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTGWSSS*CYAGAK
Trigger: TTTGGCACCTGCATAGCACCATGAGGAAGACCAGCC...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCGGCTGGTCTTCCTCATaGTGCTATGCAGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSGWSSS*CYAGAK
Trigger: TTTGGCACCTGCATAGCACCATGAGGAAGACCAGCC...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAAAAGGCAATGCTTCTaGAACCCTCTCCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRKRQCF*NPLPCS
Trigger: GCTGCAAGGGAGAGGGTTCCAGAAGCATTGCCTTTT...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGGGCAAAGTGGCTTCTTaGAGACTTCGTGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLGKVAS*RLRARC
Trigger: GCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCC...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGGGCAAAGTGGCTTCTTaGAGACTTCGTGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKGKVAS*RLRARC
Trigger: GCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCC...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGCGGTCTCTGGGGTCTTaGCATCTGTCACAGAACCCT +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARRSLGS*HLSQNP
Trigger: AGGGTTCTGTGACAGATGCCAAGACCCCAGAGACCG...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGTCACTGCTCTTGGTCTaGGCAAAGTGGCACATGCCT +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKSLLLV*AKWHMP
Trigger: AGGCATGTGCCACTTTGCCCAGACCAAGAGCAGTGA...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGTGGGCTGCCTCTTCGTaGTGCATTTACAAGCAAATT +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPWAASS*CIYKQI
Trigger: AATTTGCTTGTAAATGCATCACGAAGAGGCAGCCCA...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCAGACACTTTAGGCACTaGGCCAACACTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVRHFRH*ANTPAC
Trigger: GCAAGCAGGAGTGTTGGCTCAGTGCCTAAAGTGTCT...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCCTCCCGTAGATGCTaGAGAGCTGTTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRASRRC*RAVFRF
Trigger: AAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACTGGTTTTTGCCAGCGTaGGAAGATCCTTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINWFLPA*EDPSLW
Trigger: CCAAAGTGAAGGATCTTCTCACGCTGGCAAAAACCA...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTCATCACCCTCAGAATaGTCCTCATTAATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGSSPSE*SSLMPS
Trigger: GCTGGGCATTAATGAGGATCATTCTGAGGGTGATGA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCATTTTTCAGCTGGTTaGGTTCTTCACGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGHFSAG*VLHGWQ
Trigger: CTGCCATCCGTGAAGAACTCAACCAGCTGAAAAATG...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCATCATCGCTCGATGTaGGGGGCTGGTAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESHHRSM*GAGRPH
Trigger: GTGAGGTCTACCAGCCCCTCACATCGAGCGATGATG...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTTTTCATTCTCCAGCTaGGCCTTCAGGCGATTCATC +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGFSFSS*AFRRFI
Trigger: GATGAATCGCCTGAAGGCTCAGCTGGAGAATGAAAA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCTTTCTTTGTCCAGCCTaGCACTCTCCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVFLCPA*HSPGGP
Trigger: AGGACCTCCTGGAGAGTGTCAGGCTGGACAAAGAAA...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTTTCTTTGTCCAGCCTaGCACTCTCCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARFLCPA*HSPGGP
Trigger: AGGACCTCCTGGAGAGTGTCAGGCTGGACAAAGAAA...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGCATCATTTCGGGTATaGGCCAGATCTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAASFRV*ARSSCK
Trigger: CTTGCAGGAAGATCTGGCTCATACCCGAAATGATGC...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCGCATCATTTCGGGTATaGGCCAGATCTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSASFRV*ARSSCK
Trigger: CTTGCAGGAAGATCTGGCTCATACCCGAAATGATGC...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTTGTAGGAGTTGGCTCTaGGGAAGTCGAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGCRSWL*GSRGPS
Trigger: AGAAGGTCCTCGACTTCCTCAGAGCCAACTCCTACA...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGCAAGGCGTTCCTCTTTaGTCCTCCATATTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWQGVPL*SSIFSG
Trigger: GCCAGAGAATATGGAGGATCAAAGAGGAACGCCTTG...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTGGCTGTTCAGTTCTTaGTATGGAATGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWWLFSS*YGMWAG
Trigger: CCCTGCCCACATTCCATATCAAGAACTGAACAGCCA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACATGTCCAGTGTGGATTTaGTGCCGACACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTCPVWI*CRHFQL
Trigger: CAGCTGAAAGTGTCGGCATCAAATCCACACTGGACA...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTAAATTCAGCTGTGCATaGGCCCTTTTTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSKFSCA*ALFVWC
Trigger: GCACCAAACAAAAAGGGCTCATGCACAGCTGAATTT...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTAGTTTCCCACAGAACTaGATCCCTTTTCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLSFPQN*IPFPKF
Trigger: GAATTTGGGAAAAGGGATTCAGTTCTGTGGGAAACT...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACACAGTCTGTGGGGCAGTaGCCCCGCTTCCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTQSVGQ*PRFHWW
Trigger: CCACCAGTGGAAGCGGGGTCACTGCCCCACAGACTG...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACACCAGCGGCAGCAGCCTaGGCTCCCAGGCTGACATCT +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTPAAAA*APRLTS
Trigger: AGATGTCAGCCTGGGAGCTCAGGCTGCTGCCGCTGG...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGAGCAAAAGTGGGAACTaGGGACACCTAAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVSKSGN*GHLSGE
Trigger: CTCTCCACTTAGGTGTCCTCAGTTCCCACTTTTGCT...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGGTGGAGTGGCCTCTGTaGAGGCAAATGAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWVEWPL*RQMRAK
Trigger: TTTTGCTCTCATTTGCCTTCACAGAGGCCACTCCAC...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGGTGGAGTGGCCTCTGTaGAGGCAAATGAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGVEWPL*RQMRAK
Trigger: TTTTGCTCTCATTTGCCTTCACAGAGGCCACTCCAC...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGTGGAGTGGCCTCTGTaGAGGCAAATGAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAVEWPL*RQMRAK
Trigger: TTTTGCTCTCATTTGCCTTCACAGAGGCCACTCCAC...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGGGAACGTTTGGCCAATaGCATGTCATTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVGTFGQ*HVISSL
Trigger: CAGGGAGCTAATGACATGGCATTGGCCAAACGTTCC...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTGCTGGTAGACCTCACTaGACTCACTGTCTAAATTGT +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSAGRPH*THCLNC
Trigger: ACAATTTAGACAGTGAGTGCAGTGAGGTCTACCAGC...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGATCCGGGAGCGCTCTATaGTGGGGATGCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRSGSAL*WGCLPT
Trigger: AGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGA...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCGTGGCTGCCAAGGCTaGTTTTCCTTTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGRGCQG*FSFLLR
Trigger: TCTGAGCAGAAAGGAAAAGCAGCCTTGGCAGCCACG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCCTCGCTCCTCCTCTTaGTTGCGTGACTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRPRSSS*LRDFIS
Trigger: GGAAATAAAGTCACGCAAGCAAGAGGAGGAGCGAGG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACTCAGTCCCATTCCCTaGCTTAAGGCTGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPLSPIP*LKAAKS
Trigger: AGATTTGGCAGCCTTAAGGCAGGGAATGGGACTGAG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGCTCAGTCCCATTCCCTaGCTTAAGGCTGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGLSPIP*LKAAKS
Trigger: AGATTTGGCAGCCTTAAGGCAGGGAATGGGACTGAG...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCGAGGAATTGCAGCTaGAGCAGGGTTTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSSRNCS*SRVWYL
Trigger: CAAGTACCAAACCCTGCTGCAGCTGCAATTCCTCGA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGACGCTCCCTCCTGTaGAGAAATGTCCCGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVARRSLL*RNVPFH
Trigger: GTGAAACGGGACATTTCTGCACAGGAGGGAGCGTCG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTACAGCATCACGTTCTaGCAGTCGGGTCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARYSITF*QSGRSV
Trigger: GACTGAACGACCCGACTGGCAGAACGTGATGCTGTA...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGAAGCTTTACAGGGGTaGGTAGCTAATGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVEALQG*VANGVG
Trigger: ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGAAGCTTTACAGGGGTaGGTAGCTAATGGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGEALQG*VANGVG
Trigger: ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCCAGCAGCCACCGGCCTaGAGGATGTGTGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPQQPPA*RMCAEP
Trigger: GGGCTCAGCACACATCCTGCAGGCCGGTGGCTGCTG...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCCAATAGTCAGGAAGTaGCGCGGCCGAGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESPIVRK*RGRAFI
Trigger: GATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGG...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTATGGTGCTATGCAGGTaGCAAACACAGTTATATTCT +
Preference number: 4 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPMVLCR*QTQLYS
Trigger: AGAATATAACTGTGTTTGGCACCTGCATAGCACCAT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAAACATCGTGCTTGAATaGAGACCCCTCAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTNIVLE*RPLSPQ
Trigger: TTGTGGGCTGAGGGGTCTGCATTCAAGCACGATGTT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAAACATCGTGCTTGAATaGAGACCCCTCAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYANIVLE*RPLSPQ
Trigger: TTGTGGGCTGAGGGGTCTGCATTCAAGCACGATGTT...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCCAGCTGCACCCACATaGACAGCCCCTTTCCTAATA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGPAAPT*TAPFLI
Trigger: TATTAGGAAAGGGGCTGTGCATGTGGGTGCAGCTGG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCCGAGGCAAAAGGCAATaGTTCTGGAACCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVRGKRQ*FWNPLP
Trigger: AGGGAGAGGGTTCCAGAAGCATTGCCTTTTGCCTCG...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGCAACTGCAATAAAGTaGACTCCACATCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRATAIK*TPHQSA
Trigger: AGCCGACTGATGTGGAGTCCACTTTATTGCAGTTGC...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCCCTCCTCCATCGCTCTaGTTACCAGGGGTGATTTCT +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVPPPSL*LPGVIS
Trigger: AGAAATCACCCCTGGTAACCAGAGCGATGGAGGAGG...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGTGGTTCTCTTCCATCTaGTGTATCCGTTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELWFSSI*CIRSVR
Trigger: CCTGACTGAACGGATACACCAGATGGAAGAGAACCA...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACATCTTGCAGGGTTGCCTaGAGTTCCTCACTTGTACTG +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTSCRVA*SSSLVL
Trigger: CAGTACAAGTGAGGAACTCCAGGCAACCCTGCAAGA...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTTGCTTAAATGCTGCTaGACACCAAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGLLKCC*TPRSCS
Trigger: GGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTTGCTTAAATGCTGCTaGACACCAAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRLLKCC*TPRSCS
Trigger: GGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGGGTCACTGGCCACTGTaGCTTTGTATTCCTCTAACG +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLGHWPL*LCIPLT
Trigger: CGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACC...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACGATTCATCTCTATCTaGTCACTGGCCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPRFISI*SLATVA
Trigger: AGCCACAGTGGCCAGTGACCAGATAGAGATGAATCG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCAGCTGCAGCAGGGTTTaGTACTTGAGATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSSCSRV*YLRCTV
Trigger: GACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGAGCTGCAGCAGGGTTTaGTACTTGAGATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRSCSRV*YLRCTV
Trigger: GACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCT...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGGGGAAGCAGGCCGGCTaGCTGAAGATGTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARGKQAG*LKMFLT
Trigger: TGTTAAGAACATCTTCAGCCAGCCGGCCTGCTTCCC...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTACACTGAGAGGGTCTTaGCACTTTCCATCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGTLRGS*HFPSQA
Trigger: TGCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGT...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGCAGCCCAGAGTTGCTaGAAGCTTTACAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESAAQSC*KLYRGA
Trigger: CGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGATAGCTGTTGAGTTCTaGCCTGAGAGCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRIAVEF*PESISS
Trigger: ACTGGAGATGCTCTCAGGCCAGAACTCAACAGCTAT...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGCTTCCACTGGTGGCTaGTCTTCCTCATGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGASTGG*SSSWCY
Trigger: ATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCTCACATGAACATCAGTaGCTCATGCCAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVSHEHQ*LMPTAE
Trigger: CTCTGCTGTTGGCATGAGCCACTGATGTTCATGTGA...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTCACATGAACATCAGTaGCTCATGCCAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRSHEHQ*LMPTAE
Trigger: CTCTGCTGTTGGCATGAGCCACTGATGTTCATGTGA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCAAAAGGCAATGCTTCTaGAACCCTCTCCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSKRQCF*NPLPCS
Trigger: GCTGCAAGGGAGAGGGTTCCAGAAGCATTGCCTTTT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGCCTCCCGTAGATGCTaGAGAGCTGTTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGASRRC*RAVFRF
Trigger: AAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGATGTCATTAGCTCCCTaGCCTGCAGAAGGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRMSLAP*PAEGSF
Trigger: AAAACTACCTTCTGCAGGTCAGGGAGCTAATGACAT...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTGGTTTTTGCCAGCGTaGGAAGATCCTTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWWFLPA*EDPSLW
Trigger: CCAAAGTGAAGGATCTTCTCACGCTGGCAAAAACCA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATCATCACCCTCAGAATaGTCCTCATTAATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYASSPSE*SSLMPS
Trigger: GCTGGGCATTAATGAGGATCATTCTGAGGGTGATGA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCACATCAGTCGGCTGGTaGGCCATAATAGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSTSVGW*AIIVSF
Trigger: GAAGGAAACTATTATGGCTCACCAGCCGACTGATGT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGACATCAGTCGGCTGGTaGGCCATAATAGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRTSVGW*AIIVSF
Trigger: GAAGGAAACTATTATGGCTCACCAGCCGACTGATGT...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCATTTTTCAGCTGGTTaGGTTCTTCACGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRHFSAG*VLHGWQ
Trigger: CTGCCATCCGTGAAGAACTCAACCAGCTGAAAAATG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGGGTGACTGCGTTCTTTaGGTGCCCCTATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLGDCVL*VPLSFL
Trigger: AAGAAATGATAGGGGCACTCAAAGAACGCAGTCACC...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGGGTGACTGCGTTCTTTaGGTGCCCCTATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWGDCVL*VPLSFL
Trigger: AAGAAATGATAGGGGCACTCAAAGAACGCAGTCACC...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACATTTTCATTCTCCAGCTaGGCCTTCAGGCGATTCATC +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTFSFSS*AFRRFI
Trigger: GATGAATCGCCTGAAGGCTCAGCTGGAGAATGAAAA...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTTTCATTCTCCAGCTaGGCCTTCAGGCGATTCATC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSFSFSS*AFRRFI
Trigger: GATGAATCGCCTGAAGGCTCAGCTGGAGAATGAAAA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACTCTCCAGGAGGTCCTaGATATCAGATTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPLSRRS*ISDLSP
Trigger: TGGAGACAAATCTGATATTCAGGACCTCCTGGAGAG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTTTCTTTGTCCAGCCTaGCACTCTCCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAFLCPA*HSPGGP
Trigger: AGGACCTCCTGGAGAGTGTCAGGCTGGACAAAGAAA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGCATCATTTCGGGTATaGGCCAGATCTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGASFRV*ARSSCK
Trigger: CTTGCAGGAAGATCTGGCTCATACCCGAAATGATGC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCCTCCTCTTGCTTGCGTaGCTTTATTTCCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVLLLLA*LYFLQF
Trigger: GAATTGGAGGAAATAAAGTCACGCAAGCAAGAGGAG...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCAGGGGTTTGGATGTTaGGATTGGTCCACTTATGGA +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRQGFGC*DWSTYG
Trigger: TCCATAAGTGGACCAATCTCAACATCCAAACCCCTG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTTTGGTCTCTTATCTaGCAGGGCTGTCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGVWSLI*QGCQGF
Trigger: AAACCCCTGACAGCCCTGTCAGATAAGAGACCAAAC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCAAGGCGTTCCTCTTTaGTCCTCCATATTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGQGVPL*SSIFSG
Trigger: GCCAGAGAATATGGAGGATCAAAGAGGAACGCCTTG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTGGCTGTTCAGTTCTTaGTATGGAATGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARWLFSS*YGMWAG
Trigger: CCCTGCCCACATTCCATATCAAGAACTGAACAGCCA...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCATATGCTTTGTGGCATaGCTTTGCTTGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVICFVA*LCLPGL
Trigger: GAGGCCAGGCAAGCAAAGTCATGCCACAAAGCATAT...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGTCTGCGGGGGTCTCTaGTATGCTTTGTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESVCGGL*YALWHD
Trigger: GTCATGCCACAAAGCATATCAGAGACCCCCGCAGAC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGACAGTAATTCTCACATaGACATCAGTGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGTVILT*TSVAHA
Trigger: GGCATGAGCCACTGATGTTCATGTGAGAATTACTGT...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCAGCAAAAGTGGGAACTaGGGACACCTAAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGSKSGN*GHLSGE
Trigger: CTCTCCACTTAGGTGTCCTCAGTTCCCACTTTTGCT...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGAGTAAAGCTTGTGCTTaGAGGGAGAAGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELSKACA*REKRQS
Trigger: ACTTTGCCTCTTCTCCCTTCAAGCACAAGCTTTACT...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTAGTAAAGCTTGTGCTTaGAGGGAGAAGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGSKACA*REKRQS
Trigger: ACTTTGCCTCTTCTCCCTTCAAGCACAAGCTTTACT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGGGCTGCCTCTTCGTaGTGCATTTACAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSWAASS*CIYKQI
Trigger: GATTTGCTTGTAAATGCATCACGAAGAGGCAGCCCA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437398.5
ENST00000541492.1
CDS-3UTR GCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAAGCTGGTAGACCTCACTaGACTCACTGTCTAAATTGT +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQAGRPH*THCLNC
Trigger: ACAATTTAGACAGTGAGTGCAGTGAGGTCTACCAGC...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGTTCCTGGGTAATCTaGTGTAAATCAGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPSSWVI*CKSASS
Trigger: AGAGCTAGCTGATTTACAGCAGATTACCCAGGAACT...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTATTGCTTAAATGCTaGTGGACACCAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGVLLKC*WTPRSC
Trigger: GCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATAC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCACTGCGTTCTTTGAGTaGCCCTATCATTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVTAFFE*PYHFLS
Trigger: GCTCAAGAAATGATAGGGGCACTCAAAGAACGCAGT...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTACTGCGTTCTTTGAGTaGCCCTATCATTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRTAFFE*PYHFLS
Trigger: GCTCAAGAAATGATAGGGGCACTCAAAGAACGCAGT...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCTCCTCCTCTTGCTTaGGTGACTTTATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRAPPLA*VTLFPP
Trigger: TGGAGGAAATAAAGTCACGCAAGCAAGAGGAGGAGC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGCCTCGCTCCTCCTCTTaGTTGCGTGACTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARPRSSS*LRDFIS
Trigger: GGAAATAAAGTCACGCAAGCAAGAGGAGGAGCGAGG...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTGCCGACACTTTCAGCTaGCTGGAAAGCCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAADTFS*LESQHE
Trigger: TTCATGCTGGCTTTCCAGGCAGCTGAAAGTGTCGGC...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCAAACCAATAGCTACTaGGTTAGGCACACGGGAGAT +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAQTNSY*VRHTGD
Trigger: ATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTG...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTTCCTCATGGTGCTATaGAGGTGCCAAACACAGTTA +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRFLMVL*RCQTQL
Trigger: TAACTGTGTTTGGCACCTGCATAGCACCATGAGGAA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTAACATCGTGCTTGAATaGAGACCCCTCAGCCCACAA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGNIVLE*RPLSPQ
Trigger: TTGTGGGCTGAGGGGTCTGCATTCAAGCACGATGTT...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGTATTCTAGAACATCGTaGTTGAATGCAGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPYSRTS*LNADPS
Trigger: TGAGGGGTCTGCATTCAAGCACGATGTTCTAGAATA...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTAACATCAGTGGCTCATaGCAACAGCAGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVANISGS*QQQSWP
Trigger: TGGCCAGCTCTGCTGTTGGCATGAGCCACTGATGTT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTGGTCATCACTGCTCTTaGTCTTTGACAATGATGCTG +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGGHHCS*SLTMML
Trigger: CAGCATCATTGTCAAAGACCAAGAGCAGTGATGACC...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGGAAGATCCTTCACTTTaGCCTCCAAAGCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVEDPSL*PPKQLC
Trigger: ACAGAGCTGCTTTGGAGGCCAAAGTGAAGGATCTTC...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAAGATCCTTCACTTTaGCCTCCAAAGCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYREDPSL*PPKQLC
Trigger: ACAGAGCTGCTTTGGAGGCCAAAGTGAAGGATCTTC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGTGGTTCTCTTCCATCTaGTGTATCCGTTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGWFSSI*CIRSVR
Trigger: CCTGACTGAACGGATACACCAGATGGAAGAGAACCA...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCATGGTTCTCTTCCATCTaGTGTATCCGTTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPWFSSI*CIRSVR
Trigger: CCTGACTGAACGGATACACCAGATGGAAGAGAACCA...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCTCTTGCAGGGTTGCCTaGAGTTCCTCACTTGTACTG +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGSCRVA*SSSLVL
Trigger: CAGTACAAGTGAGGAACTCCAGGCAACCCTGCAAGA...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTTGCTTAAATGCTGCTaGACACCAAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWLLKCC*TPRSCS
Trigger: GGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTTGCTTAAATGCTGCTaGACACCAAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVALLKCC*TPRSCS
Trigger: GGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAA...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCTCTCTATCTGGTCACTaGCCACTGTGGCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVSLSGH*PLWLCI
Trigger: AATACAAAGCCACAGTGGCCAGTGACCAGATAGAGA...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCGATTCATCTCTATCTaGTCACTGGCCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGRFISI*SLATVA
Trigger: AGCCACAGTGGCCAGTGACCAGATAGAGATGAATCG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGGTTTTCATAGGACTTaGGCTCAGGGGCGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESGFHRT*AQGRSR
Trigger: CCTCGAACGCCCCTGAGCCCAAGTCCTATGAAAACC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGGACAGGGAAAGCTGTaGAGACGTGGTTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESGQGKL*RRGSHS
Trigger: GCTATGGGAACCACGTCTCCACAGCTTTCCCTGTCC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGATCCTCCATATTCTCTaGCCAATGCTGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGILHIL*PMLREG
Trigger: ACCCTCTCTCAGCATTGGCCAGAGAATATGGAGGAT...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCAATCCTCCATATTCTCTaGCCAATGCTGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPILHIL*PMLREG
Trigger: ACCCTCTCTCAGCATTGGCCAGAGAATATGGAGGAT...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACAGAGGCTCACACGCTGTaGGGCAGCCCAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTEAHTL*GSPELL
Trigger: CAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTC...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGAAAAGGCAATGCTTCTaGAACCCTCTCCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARKRQCF*NPLPCS
Trigger: GCTGCAAGGGAGAGGGTTCCAGAAGCATTGCCTTTT...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTGGGCTGCCTCTTCGTaGTGCATTTACAAGCAAATT +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAWAASS*CIYKQI
Trigger: AATTTGCTTGTAAATGCATCACGAAGAGGCAGCCCA...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTGCCTCCCGTAGATGCTaGAGAGCTGTTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAASRRC*RAVFRF
Trigger: AAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGC...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCAATGTCATTAGCTCCCTaGCCTGCAGAAGGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPMSLAP*PAEGSF
Trigger: AAAACTACCTTCTGCAGGTCAGGGAGCTAATGACAT...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAATGTCATTAGCTCCCTaGCCTGCAGAAGGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTMSLAP*PAEGSF
Trigger: AAAACTACCTTCTGCAGGTCAGGGAGCTAATGACAT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR TCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTACTGATCTGATTGTCTaGCTTAGACTTGCTCATACG +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGTDLIV*LRLAHT
Trigger: CGTATGAGCAAGTCTAAGTCAGACAATCAGATCAGT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGGCTCTGTCACTGATCTaGTTGTCTGACTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWALSLI*LSDLDL
Trigger: CAAGTCTAAGTCAGACAATCAGATCAGTGACAGAGC...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGCTCTGTCACTGATCTaGTTGTCTGACTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAALSLI*LSDLDL
Trigger: CAAGTCTAAGTCAGACAATCAGATCAGTGACAGAGC...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCACATCAGTCGGCTGGTaGGCCATAATAGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVTSVGW*AIIVSF
Trigger: GAAGGAAACTATTATGGCTCACCAGCCGACTGATGT...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCCATTTTTCAGCTGGTTaGGTTCTTCACGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGHFSAG*VLHGWQ
Trigger: CTGCCATCCGTGAAGAACTCAACCAGCTGAAAAATG...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCAGTGTATTTTCATCCTaGCTCAAGAGATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVSVFSS*LKRSST
Trigger: AGTGGAGGATCTCTTGAGTCAGGATGAAAATACACT...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCTCTCCAGGAGGTCCTaGATATCAGATTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGLSRRS*ISDLSP
Trigger: TGGAGACAAATCTGATATTCAGGACCTCCTGGAGAG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCCTCTCCAGGAGGTCCTaGATATCAGATTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGLSRRS*ISDLSP
Trigger: TGGAGACAAATCTGATATTCAGGACCTCCTGGAGAG...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGATAATGAGGTTGTCATaGAGTTTCACAGCACGATGT +
Preference number: 4 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPIMRLS*SFTARC
Trigger: ACATCGTGCTGTGAAACTTCATGACAACCTCATTAT...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGCTCCTCTTGCTTGCGTaGCTTTATTTCCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWLLLLA*LYFLQF
Trigger: GAATTGGAGGAAATAAAGTCACGCAAGCAAGAGGAG...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTGTCCAGTGTGGATTTaGTGCCGACACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVACPVWI*CRHFQL
Trigger: CAGCTGAAAGTGTCGGCATCAAATCCACACTGGACA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGAAATTCAGCTGTGCATaGGCCCTTTTTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVKFSCA*ALFVWC
Trigger: GCACCAAACAAAAAGGGCTCATGCACAGCTGAATTT...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGTTTCCCACAGAACTaGATCCCTTTTCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRSFPQN*IPFPKF
Trigger: GAATTTGGGAAAAGGGATTCAGTTCTGTGGGAAACT...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAGTTTCCCACAGAACTaGATCCCTTTTCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGSFPQN*IPFPKF
Trigger: GAATTTGGGAAAAGGGATTCAGTTCTGTGGGAAACT...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGACCCACGTCTGTGGTaGACATGCTCCTCCAAACTA +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESDPRLW*TCSSKL
Trigger: TAGTTTGGAGGAGCATGTTCACCACAGACGTGGGTC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCTCAGTGAGTTTAAATaGCACTGCCTGGGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVALSEFK*HCLGSL
Trigger: TAGGGAGCCCAGGCAGTGTCATTTAAACTCACTGAG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACTAGAACATCGTGCTTaGATGCAGACCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRLEHRA*MQTPQP
Trigger: GGGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGACAGTAATTCTCACATaGACATCAGTGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRTVILT*TSVAHA
Trigger: GGCATGAGCCACTGATGTTCATGTGAGAATTACTGT...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCACAGTAATTCTCACATaGACATCAGTGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSTVILT*TSVAHA
Trigger: GGCATGAGCCACTGATGTTCATGTGAGAATTACTGT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTACGTCTTTGGTTTTTaGCAGCGTGAGAAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGYVFGF*QREKIL
Trigger: AAGGATCTTCTCACGCTGGCAAAAACCAAAGACGTA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAATTCTGTTCCTGCAACTaGAATAAAGTGGACTCCACA +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQFCSCN*NKVDST
Trigger: TGTGGAGTCCACTTTATTGCAGTTGCAGGAACAGAA...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGGAATTGTCTAACCTCTaGTCTAGGGAAAAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELELSNL*SREKPN
Trigger: ATTGGGCTTTTCCCTAGAGCAGAGGTTAGACAATTC...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGCTGGTAGACCTCACTaGACTCACTGTCTAAATTGT +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTAGRPH*THCLNC
Trigger: ACAATTTAGACAGTGAGTGCAGTGAGGTCTACCAGC...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATCCGGGAGCGCTCTATaGTGGGGATGCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTSGSAL*WGCLPT
Trigger: AGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTAAATCAGCTAGCTCTTaGAGGGTTGCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAKSASS*RVAWSS
Trigger: GGAACTCCAGGCAACCCTGCAAGAGCTAGCTGATTT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGGTATTGCTTAAATGCTaGTGGACACCAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVVLLKC*WTPRSC
Trigger: GCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATAC...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGACTGCGTTCTTTGAGTaGCCCTATCATTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKTAFFE*PYHFLS
Trigger: GCTCAAGAAATGATAGGGGCACTCAAAGAACGCAGT...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCTCAGTCCCATTCCCTaGCTTAAGGCTGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVALSPIP*LKAAKS
Trigger: AGATTTGGCAGCCTTAAGGCAGGGAATGGGACTGAG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAATCCCAAATTCAGCTGTaGATGAGCCCTTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQSQIQL*MSPFCL
Trigger: CAAACAAAAAGGGCTCATGCACAGCTGAATTTGGGA...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATTCCTCATGGTGCTATaGAGGTGCCAAACACAGTTA +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAFLMVL*RCQTQL
Trigger: TAACTGTGTTTGGCACCTGCATAGCACCATGAGGAA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTTCCTCATGGTGCTATaGAGGTGCCAAACACAGTTA +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLFLMVL*RCQTQL
Trigger: TAACTGTGTTTGGCACCTGCATAGCACCATGAGGAA...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGATAAAGTTGGGAACTaGAGACCAGGGGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRDKVGN*RPGEAP
Trigger: GGGGGCTTCCCCTGGTCTGCAGTTCCCAACTTTATC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGGGTCATCACTGCTCTTaGTCTTTGACAATGATGCTG +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKGHHCS*SLTMML
Trigger: CAGCATCATTGTCAAAGACCAAGAGCAGTGATGACC...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGAAGATCCTTCACTTTaGCCTCCAAAGCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGEDPSL*PPKQLC
Trigger: ACAGAGCTGCTTTGGAGGCCAAAGTGAAGGATCTTC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGCAACTGCAATAAAGTaGACTCCACATCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGATAIK*TPHQSA
Trigger: AGCCGACTGATGTGGAGTCCACTTTATTGCAGTTGC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCTGGTTCTCTTCCATCTaGTGTATCCGTTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVWFSSI*CIRSVR
Trigger: CCTGACTGAACGGATACACCAGATGGAAGAGAACCA...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTTGTATTCCTCTAACGTaGCTGCCAAGGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGCIPLT*LPRLLF
Trigger: GAAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACA...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCTGTATTCCTCTAACGTaGCTGCCAAGGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVCIPLT*LPRLLF
Trigger: GAAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACA...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTGGTCACTGGCCACTGTaGCTTTGTATTCCTCTAACG +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAGHWPL*LCIPLT
Trigger: CGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACC...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGTCTCTATCTGGTCACTaGCCACTGTGGCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKSLSGH*PLWLCI
Trigger: AATACAAAGCCACAGTGGCCAGTGACCAGATAGAGA...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTCTCTATCTGGTCACTaGCCACTGTGGCTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLSLSGH*PLWLCI
Trigger: AATACAAAGCCACAGTGGCCAGTGACCAGATAGAGA...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTTGTCTCCAGAGTTATaGATAGAATACAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRLSPEL*IEYSSA
Trigger: GGCAGAGCTGTATTCTATCCATAACTCTGGAGACAA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGCATCCTGTAATCGATTaGCATCATTTCGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELHPVID*HHFGYE
Trigger: CTCATACCCGAAATGATGCCAATCGATTACAGGATG...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACTTCTTAGCTTCTTCTTaGAAGGCTCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINFLASS*KARYSS
Trigger: GGATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAA...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAATTCTTAGCTTCTTCTTaGAAGGCTCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQFLASS*KARYSS
Trigger: GGATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAA...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCATCCTCCATATTCTCTaGCCAATGCTGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGILHIL*PMLREG
Trigger: ACCCTCTCTCAGCATTGGCCAGAGAATATGGAGGAT...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCGTTCAGTTCTTGATATaGAATGTGGGCAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVVQFLI*NVGREI
Trigger: TATCTCCCTGCCCACATTCCATATCAAGAACTGAAC...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTTTTGTTTGGTGCCCTaGAGCACTAGTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRFCLVP*STSVVQ
Trigger: TTGAACTACACTAGTGCTCCAGGGCACCAAACAAAA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTTTTGTTTGGTGCCCTaGAGCACTAGTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LQGCVANGVGVARSLWRGFCLVP*STSVVQ
Trigger: TTGAACTACACTAGTGCTCCAGGGCACCAAACAAAA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACACAGGCTGAACACGCCTaGATTGTGTCGGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTQAEHA*IVSAGT
Trigger: TGTCCCGGCCGACACAATCCAGGCGTGTTCAGCCTG...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTGGTACAGGTCTTGTCTaGACATTGTTCAAACCAATA +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSGTGLV*TLFKPI
Trigger: TATTGGTTTGAACAATGTCCAGACAAGACCTGTACC...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAAGGGCTGGGCTCGCATaGCCAGCAAGGGATAAAGTT +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRRAGLA*PARDKV
Trigger: AACTTTATCCCTTGCTGGCCATGCGAGCCCAGCCCT...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGACTGATCTGATTGTCTaGCTTAGACTTGCTCATACG +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLTDLIV*LRLAHT
Trigger: CGTATGAGCAAGTCTAAGTCAGACAATCAGATCAGT...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAACTGATCTGATTGTCTaGCTTAGACTTGCTCATACG +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTTDLIV*LRLAHT
Trigger: CGTATGAGCAAGTCTAAGTCAGACAATCAGATCAGT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGCTCTGTCACTGATCTaGTTGTCTGACTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGALSLI*LSDLDL
Trigger: CAAGTCTAAGTCAGACAATCAGATCAGTGACAGAGC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTGGTTTTTGCCAGCGTaGGAAGATCCTTCACTTTGG +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAWFLPA*EDPSLW
Trigger: CCAAAGTGAAGGATCTTCTCACGCTGGCAAAAACCA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCATTTTTCAGCTGGTTaGGTTCTTCACGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAHFSAG*VLHGWQ
Trigger: CTGCCATCCGTGAAGAACTCAACCAGCTGAAAAATG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAAACTTATCGCTCTGCTaGCATAAAGACTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYANLSLC*HKDSIR
Trigger: TCTGATGGAGTCTTTATGTCAGCAGAGCGATAAGTT...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGATAATGAGGTTGTCATaGAGTTTCACAGCACGATGT +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRIMRLS*SFTARC
Trigger: ACATCGTGCTGTGAAACTTCATGACAACCTCATTAT...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCCTCCTCTTGCTTGCGTaGCTTTATTTCCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVLLLLA*LYFLQF
Trigger: GAATTGGAGGAAATAAAGTCACGCAAGCAAGAGGAG...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCAGGGGTTTGGATGTTaGGATTGGTCCACTTATGGA +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAQGFGC*DWSTYG
Trigger: TCCATAAGTGGACCAATCTCAACATCCAAACCCCTG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGTTTGGTCTCTTATCTaGCAGGGCTGTCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESVWSLI*QGCQGF
Trigger: AAACCCCTGACAGCCCTGTCAGATAAGAGACCAAAC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACCACTTTAAACACGTGTaGGCATCTATAGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINHFKHV*ASIVIP
Trigger: AGGAATGACTATAGATGCTCACACGTGTTTAAAGTG...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACATTCTTCATTCTGGGCTaGCTCTTCGTGATGCATTTA +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTFFILG*LFVMHL
Trigger: TAAATGCATCACGAAGAGGCAGCCCAGAATGAAGAA...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTTCTTCATTCTGGGCTaGCTCTTCGTGATGCATTTA +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAFFILG*LFVMHL
Trigger: TAAATGCATCACGAAGAGGCAGCCCAGAATGAAGAA...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTACGTCTTTGGTTTTTaGCAGCGTGAGAAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLYVFGF*QREKIL
Trigger: AAGGATCTTCTCACGCTGGCAAAAACCAAAGACGTA...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATTCTGTTCCTGCAACTaGAATAAAGTGGACTCCACA +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAFCSCN*NKVDST
Trigger: TGTGGAGTCCACTTTATTGCAGTTGCAGGAACAGAA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCGCAGTATTCTGTTCCTaGAACTGCAATAAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSAVFCS*NCNKVD
Trigger: GTCCACTTTATTGCAGTTGCAGGAACAGAATACTGC...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGGAATTGTCTAACCTCTaGTCTAGGGAAAAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWELSNL*SREKPN
Trigger: ATTGGGCTTTTCCCTAGAGCAGAGGTTAGACAATTC...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGGAATTGTCTAACCTCTaGTCTAGGGAAAAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKELSNL*SREKPN
Trigger: ATTGGGCTTTTCCCTAGAGCAGAGGTTAGACAATTC...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGCTGGTAGACCTCACTaGACTCACTGTCTAAATTGT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGAGRPH*THCLNC
Trigger: ACAATTTAGACAGTGAGTGCAGTGAGGTCTACCAGC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCAAATCAGCTAGCTCTTaGAGGGTTGCCTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESKSASS*RVAWSS
Trigger: GGAACTCCAGGCAACCCTGCAAGAGCTAGCTGATTT...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTATTGCTTAAATGCTaGTGGACACCAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGVLLKC*WTPRSC
Trigger: GCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATAC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCAGCTGCTTTTCCTTTCTaGTCAGACTCAATAATTCGC +
Preference number: 4 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPAAFPF*SDSIIR
Trigger: GCGAATTATTGAGTCTGAGCAGAAAGGAAAAGCAGC...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAACTAGCCAAAGTCTCTaGTTTTTCTTTGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYATSQSL*FFFVQP
Trigger: AGGCTGGACAAAGAAAAAGCAGAGACTTTGGCTAGT...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCACTAGCCAAAGTCTCTaGTTTTTCTTTGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSTSQSL*FFFVQP
Trigger: AGGCTGGACAAAGAAAAAGCAGAGACTTTGGCTAGT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCCTCGCTCCTCCTCTTaGTTGCGTGACTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESPRSSS*LRDFIS
Trigger: GGAAATAAAGTCACGCAAGCAAGAGGAGGAGCGAGG...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCGACACTTTCAGCTaGCTGGAAAGCCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRADTFS*LESQHE
Trigger: TTCATGCTGGCTTTCCAGGCAGCTGAAAGTGTCGGC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGATGGTGCTATGCAGGTaGCAAACACAGTTATATTCT +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELMVLCR*QTQLYS
Trigger: AGAATATAACTGTGTTTGGCACCTGCATAGCACCAT...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTGGTCTTCCTCATGGTaGTATGCAGGTGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESWSSSW*YAGAKH
Trigger: GTGTTTGGCACCTGCATAGCACCATGAGGAAGACCA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACCAGCTGCACCCACATaGACAGCCCCTTTCCTAATA +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRPAAPT*TAPFLI
Trigger: TATTAGGAAAGGGGCTGTGCATGTGGGTGCAGCTGG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCAGGTGTGCCGCCAGCTaGACCCACATGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPRCAAS*THMHSP
Trigger: GGGGCTGTGCATGTGGGTGCAGCTGGCGGCACACCT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGTGAGCTCACCCGGTaGCTCAGCCGAGACCCGTTG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGELTR*LSRDPL
Trigger: CAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGGGTCATCACTGCTCTTaGTCTTTGACAATGATGCTG +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARGHHCS*SLTMML
Trigger: CAGCATCATTGTCAAAGACCAAGAGCAGTGATGACC...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CCA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTGTCTAAATTGTCCATaGAGTTACTGTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRCLNCP*SYCADG
Trigger: ACCATCAGCACAGTAACTCCATGGACAATTTAGACA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTGTATTCCTCTAACGTaGCTGCCAAGGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVACIPLT*LPRLLF
Trigger: GAAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGTTGTCTCCAGAGTTATaGATAGAATACAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVLSPEL*IEYSSA
Trigger: GGCAGAGCTGTATTCTATCCATAACTCTGGAGACAA...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTGTCTCCAGAGTTATaGATAGAATACAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSLSPEL*IEYSSA
Trigger: GGCAGAGCTGTATTCTATCCATAACTCTGGAGACAA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGTTGTCTCCAGAGTTATaGATAGAATACAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGLSPEL*IEYSSA
Trigger: GGCAGAGCTGTATTCTATCCATAACTCTGGAGACAA...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTTCTTAGCTTCTTCTTaGAAGGCTCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAFLASS*KARYSS
Trigger: GGATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAA...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCTCCCGAAGTCTTCTGTaGAGTGTCTTTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVSRSLL*SVFISL
Trigger: AAGAGAAATAAAGACACTCCACAGAAGACTTCGGGA...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGTCCCGAAGTCTTCTGTaGAGTGTCTTTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELSRSLL*SVFISL
Trigger: AAGAGAAATAAAGACACTCCACAGAAGACTTCGGGA...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGGGCTGTCAGGGGTTTaGATGTTGAGATTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRGLSGV*MLRLVH
Trigger: GTGGACCAATCTCAACATCCAAACCCCTGACAGCCC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATTCGGCTTCGGGTGGTaGGAGTCACAGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTFGFGW*ESQMPL
Trigger: CAACGGCATCTGTGACTCCCACCACCCGAAGCCGAA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGTTCAGTTCTTGATATaGAATGTGGGCAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAVQFLI*NVGREI
Trigger: TATCTCCCTGCCCACATTCCATATCAAGAACTGAAC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTTTTGTTTGGTGCCCTaGAGCACTAGTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRFCLVP*STSVVQ
Trigger: TTGAACTACACTAGTGCTCCAGGGCACCAAACAAAA...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCGTCCCAGGAGGGAGCTaGGTTCTGGTTTATGCGACG +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPVPGGS*VLVYAT
Trigger: CGTCGCATAAACCAGAACCCAGCTCCCTCCTGGGAC...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTTCAGCCGAGACCCGTTaGGTCCGGCCTCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARSAETR*VRPQES
Trigger: GCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGA...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATCTGGTTACCAGGGGTaGTTTCTGGGCTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTSGYQG*FLGSGT
Trigger: AGTCCCTGAGCCCAGAAATCACCCCTGGTAACCAGA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTAGTGTATTTTCATCCTaGCTCAAGAGATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGSVFSS*LKRSST
Trigger: AGTGGAGGATCTCTTGAGTCAGGATGAAAATACACT...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGATGGAGTTACTGTGCTaGTGGTCCATTAGTGTATTT +
Preference number: 4 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVMELLC*WSISVF
Trigger: AAATACACTAATGGACCATCAGCACAGTAACTCCAT...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGATGGAGTTACTGTGCTaGTGGTCCATTAGTGTATTT +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWMELLC*WSISVF
Trigger: AAATACACTAATGGACCATCAGCACAGTAACTCCAT...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTAACTTATCGCTCTGCTaGCATAAAGACTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGNLSLC*HKDSIR
Trigger: TCTGATGGAGTCTTTATGTCAGCAGAGCGATAAGTT...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAATTCGCTCCATATGGTaGCTGCGTTCTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRIRSIW*LRSLSA
Trigger: GGCACTCAAAGAACGCAGTCACCATATGGAGCGAAT...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCATAATGAGGTTGTCATaGAGTTTCACAGCACGATGT +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSIMRLS*SFTARC
Trigger: ACATCGTGCTGTGAAACTTCATGACAACCTCATTAT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACAAGGCGTTCCTCTTTaGTCCTCCATATTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRQGVPL*SSIFSG
Trigger: GCCAGAGAATATGGAGGATCAAAGAGGAACGCCTTG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTAAATTCAGCTGTGCATaGGCCCTTTTTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAKFSCA*ALFVWC
Trigger: GCACCAAACAAAAAGGGCTCATGCACAGCTGAATTT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTCAGGTGTGGGGCAGCTaGCCCACGTCTGTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARQVWGS*PTSVVN
Trigger: GTTCACCACAGACGTGGGTCAGCTGCCCCACACCTG...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCACTTTAAACACGTGTaGGCATCTATAGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRHFKHV*ASIVIP
Trigger: AGGAATGACTATAGATGCTCACACGTGTTTAAAGTG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTGGGCTGCCTCTTCGTaGTGCATTTACAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESWAASS*CIYKQI
Trigger: GATTTGCTTGTAAATGCATCACGAAGAGGCAGCCCA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437398.5
CDS-3UTR GCA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCTACGTCTTTGGTTTTTaGCAGCGTGAGAAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LWGSPELLEALQGCVANGYVFGF*QREKIL
Trigger: AAGGATCTTCTCACGCTGGCAAAAACCAAAGACGTA...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTTTCTGTTCCTGCAACTaGAATAAAGTGGACTCCACA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGFCSCN*NKVDST
Trigger: TGTGGAGTCCACTTTATTGCAGTTGCAGGAACAGAA...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGCAGTATTCTGTTCCTaGAACTGCAATAAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGAVFCS*NCNKVD
Trigger: GTCCACTTTATTGCAGTTGCAGGAACAGAATACTGC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGAGTTCCTGGGTAATCTaGTGTAAATCAGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARSSWVI*CKSASS
Trigger: AGAGCTAGCTGATTTACAGCAGATTACCCAGGAACT...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGAAAGTATTGCTTAAATaGTGCTGGACACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGKVLLK*CWTPRS
Trigger: GCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTT...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAAAGTATTGCTTAAATaGTGCTGGACACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: EALQGCVANGVGVARSLWKVLLK*CWTPRS
Trigger: GCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTT...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAAAGTATTGCTTAAATaGTGCTGGACACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: HTLWGSPELLEALQGCVAKVLLK*CWTPRS
Trigger: GCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTT...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTACTGCGTTCTTTGAGTaGCCCTATCATTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVATAFFE*PYHFLS
Trigger: GCTCAAGAAATGATAGGGGCACTCAAAGAACGCAGT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGCTGCTTTTCCTTTCTaGTCAGACTCAATAATTCGC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVAAFPF*SDSIIR
Trigger: GCGAATTATTGAGTCTGAGCAGAAAGGAAAAGCAGC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGCTGCTTTTCCTTTCTaGTCAGACTCAATAATTCGC +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGAAFPF*SDSIIR
Trigger: GCGAATTATTGAGTCTGAGCAGAAAGGAAAAGCAGC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTACTAGCCAAAGTCTCTaGTTTTTCTTTGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGTSQSL*FFFVQP
Trigger: AGGCTGGACAAAGAAAAAGCAGAGACTTTGGCTAGT...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTATTTGCAATGACTACTaGAGTCTGGAGATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAICNDY*SLEISL
Trigger: CAGGCTGATCTCCAGACTGCAGTAGTCATTGCAAAT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGCTCCTCCTCTTGCTTaGGTGACTTTATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESAPPLA*VTLFPP
Trigger: TGGAGGAAATAAAGTCACGCAAGCAAGAGGAGGAGC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGTTTTCTCCTATTTCCTaGTTTATTCCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ALQGCVANGVGVARSLWRFSPIS*FIPCSH
Trigger: GTGAGAGCAAGGAATAAAGCAGGAAATAGGAGAAAA...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAACTTTTCTCCTATTTCCTaGTTTATTCCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: RNPPQPIVRKCRGRAFINFSPIS*FIPCSH
Trigger: GTGAGAGCAAGGAATAAAGCAGGAAATAGGAGAAAA...GTTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTTATTCTAGAACATCGTaGTTGAATGCAGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGYSRTS*LNADPS
Trigger: TGAGGGGTCTGCATTCAAGCACGATGTTCTAGAATA...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCTGGAACCCTCTCCCTTaGAGCTCTGCACGCAAACCT +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPWNPLP*SSARKP
Trigger: AGGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCA...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATGGAACCCTCTCCCTTaGAGCTCTGCACGCAAACCT +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTWNPLP*SSARKP
Trigger: AGGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTTTCCAAGATGATACATaGCTCAAAACAAACAAAACC +
Preference number: 4 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSFQDDT*LKTNKT
Trigger: GGTTTTGTTTGTTTTGAGGCATGTATCATCTTGGAA...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR GCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAAAAAGTTTATCTGGTTaGCTCTGGGTAGGATACCTT +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTKSLSG*LWVGYL
Trigger: AAGGTATCCTACCCAGAGGCAACCAGATAAACTTTT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGTGTCTAAATTGTCCATaGAGTTACTGTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRCLNCP*SYCADG
Trigger: ACCATCAGCACAGTAACTCCATGGACAATTTAGACA...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGTCTAAATTGTCCATaGAGTTACTGTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSCLNCP*SYCADG
Trigger: ACCATCAGCACAGTAACTCCATGGACAATTTAGACA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTCACTATTCAGTTCCTaGGTAATCTGCTGTAAATCA +
Preference number: 4 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGSLFSS*VICCKS
Trigger: TGATTTACAGCAGATTACCCAGGAACTGAATAGTGA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCATCCTGTAATCGATTaGCATCATTTCGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGHPVID*HHFGYE
Trigger: CTCATACCCGAAATGATGCCAATCGATTACAGGATG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTTCTTAGCTTCTTCTTaGAAGGCTCGGTATTCATCC +
Preference number: 4 (lower is better)
Translates to: ELLEALQGCVANGVGVARFLASS*KARYSS
Trigger: GGATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAA...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACATCCCGAAGTCTTCTGTaGAGTGTCTTTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTSRSLL*SVFISL
Trigger: AAGAGAAATAAAGACACTCCACAGAAGACTTCGGGA...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTCATCGCAGGCACTCTTaGCAGGGAAGCAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARHRRHS*QGSRPA
Trigger: AGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATG...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGTTCAGTTCTTGATATaGAATGTGGGCAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVVQFLI*NVGREI
Trigger: TATCTCCCTGCCCACATTCCATATCAAGAACTGAAC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGCCACGGAGGGCAGTaGCTGCCCTCACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGHGGQ*LPSQEE
Trigger: CTCTTCTTGTGAGGGCAGCCACTGCCCTCCGTGGCC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGGGTACAGGTCTTGTCTaGACATTGTTCAAACCAATA +
Preference number: 4 (lower is better)
Translates to: LEALQGCVANGVGVARSLGTGLV*TLFKPI
Trigger: TATTGGTTTGAACAATGTCCAGACAAGACCTGTACC...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTAGTGTATTTTCATCCTaGCTCAAGAGATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVASVFSS*LKRSST
Trigger: AGTGGAGGATCTCTTGAGTCAGGATGAAAATACACT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTAACTTATCGCTCTGCTaGCATAAAGACTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVANLSLC*HKDSIR
Trigger: TCTGATGGAGTCTTTATGTCAGCAGAGCGATAAGTT...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTACATCTGGGCAGGGCTaGTGGGCAGCTTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARTSGQG*WAASGH
Trigger: ATGGCCAGAAGCTGCCCATCAGCCCTGCCCAGATGT...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTTCTTCATTCTGGGCTaGCTCTTCGTGATGCATTTA +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAFFILG*LFVMHL
Trigger: TAAATGCATCACGAAGAGGCAGCCCAGAATGAAGAA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTGCAGTATTCTGTTCCTaGAACTGCAATAAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVAAVFCS*NCNKVD
Trigger: GTCCACTTTATTGCAGTTGCAGGAACAGAATACTGC...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGTATTGCTTAAATGCTaGTGGACACCAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESVLLKC*WTPRSC
Trigger: GCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATAC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCAAAGTATTGCTTAAATaGTGCTGGACACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WGSPELLEALQGCVANGVKVLLK*CWTPRS
Trigger: GCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTT...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATACAGCATCACGTTCTaGCAGTCGGGTCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTYSITF*QSGRSV
Trigger: GACTGAACGACCCGACTGGCAGAACGTGATGCTGTA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACACCAGCTGCACCCACATaGACAGCCCCTTTCCTAATA +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTPAAPT*TAPFLI
Trigger: TATTAGGAAAGGGGCTGTGCATGTGGGTGCAGCTGG...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATCATTAATGCCCAGCTaGGCACGCATGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTSLMPS*ARMSRS
Trigger: ACTGCGAGACATGCGTGCCCAGCTGGGCATTAATGA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGGAGCGCTCTATGCTaGGGATGCCTTCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGSALC*GCLPTL
Trigger: CAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATCACTATTCAGTTCCTaGGTAATCTGCTGTAAATCA +
Preference number: 4 (lower is better)
Translates to: WGSDPASTGGWSSSWCYASLFSS*VICCKS
Trigger: TGATTTACAGCAGATTACCCAGGAACTGAATAGTGA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCACTATTCAGTTCCTaGGTAATCTGCTGTAAATCA +
Preference number: 4 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSSLFSS*VICCKS
Trigger: TGATTTACAGCAGATTACCCAGGAACTGAATAGTGA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCCCCCGCTTCCACTGGTaGCTGGTCTTCCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPPRFHW*LVFLMV
Trigger: CACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGG...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCTGCCAACAGCAGAGCTaGCCATCAACAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPCQQQS*PSTEEQ
Trigger: CTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCA...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CAA 72 bp GTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTaGAATGCAGACCCCTCAGCCCACAATCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VDTLNSYSRTSC*NADPSAHNRAG
Trigger: GCCAGCCCGATTGTGGGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTCTGTCACTGATCTaGTTGTCTGACTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRALSLI*LSDLDL
Trigger: CAAGTCTAAGTCAGACAATCAGATCAGTGACAGAGC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTCATCATCGCTCGATGTaGGGGGCTGGTAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARHHRSM*GAGRPH
Trigger: GTGAGGTCTACCAGCCCCTCACATCGAGCGATGATG...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTAGGTCAAAGCTGCACTaGGCTGTGATCACGCCACCG +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARRSKLH*AVITPP
Trigger: CGGTGGCGTGATCACAGCTCAGTGCAGCTTTGACCT...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS-3UTR GCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTGGGGCAGCCCAGAGTTaGTGGAAGCTTTACAGGGGT +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARGAAQS*WKLYRG
Trigger: ACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCC...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTTTTTCTCCTATTTCCTaGTTTATTCCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GSPELLEALQGCVANGVGFSPIS*FIPCSH
Trigger: GTGAGAGCAAGGAATAAAGCAGGAAATAGGAGAAAA...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGTTCCAAGATGATACATaGCTCAAAACAAACAAAACC +
Preference number: 4 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKFQDDT*LKTNKT
Trigger: GGTTTTGTTTGTTTTGAGGCATGTATCATCTTGGAA...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTATTGCATCCAGTCTGTaGGGCAGTGACCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARIASSL*GSDPAS
Trigger: GGAAGCGGGGTCACTGCCCCACAGACTGGATGCAAT...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCCTCTGCCACGGTCTCTaGGGTCTTGGCATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPLCHGL*GLGICH
Trigger: GTGACAGATGCCAAGACCCCAGAGACCGTGGCAGAG...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR TCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCACATCAGTCGGCTGGTaGGCCATAATAGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPTSVGW*AIIVSF
Trigger: GAAGGAAACTATTATGGCTCACCAGCCGACTGATGT...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGCAGAGCCTTCCACTaGAGAAGTCAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGRAFH*RSQSSS
Trigger: GGAGGAACTCTGACTTCTTCAGTGGAAGGCTCTGCC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCATGGAGTTACTGTGCTaGTGGTCCATTAGTGTATTT +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESMELLC*WSISVF
Trigger: AAATACACTAATGGACCATCAGCACAGTAACTCCAT...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCCAGGGGTTTGGATGTTaGGATTGGTCCACTTATGGA +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPQGFGC*DWSTYG
Trigger: TCCATAAGTGGACCAATCTCAACATCCAAACCCCTG...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTCTAGAACATCGTGCTTaGATGCAGACCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARLEHRA*MQTPQP
Trigger: GGGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAG...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTGTCTGCGGGGGTCTCTaGTATGCTTTGTGGCATGAC +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARVCGGL*YALWHD
Trigger: GTCATGCCACAAAGCATATCAGAGACCCCCGCAGAC...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGAATTGTCTAACCTCTaGTCTAGGGAAAAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRELSNL*SREKPN
Trigger: ATTGGGCTTTTCCCTAGAGCAGAGGTTAGACAATTC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGTGGGAGTCACAGATaGCGTTGGAGAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGGSHR*RWRRGQ
Trigger: CTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCCAAACCAATAGCTACTaGGTTAGGCACACGGGAGAT +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPQTNSY*VRHTGD
Trigger: ATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTG...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACAGCAACTGCAATAAAGTaGACTCCACATCAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTATAIK*TPHQSA
Trigger: AGCCGACTGATGTGGAGTCCACTTTATTGCAGTTGC...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTCACTATTCAGTTCCTaGGTAATCTGCTGTAAATCA +
Preference number: 4 (lower is better)
Translates to: PELLEALQGCVANGVGVASLFSS*VICCKS
Trigger: TGATTTACAGCAGATTACCCAGGAACTGAATAGTGA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCTGTATTCCTCTAACGTaGCTGCCAAGGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPCIPLT*LPRLLF
Trigger: GAAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACA...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGACATCCTGTAATCGATTaGCATCATTTCGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRHPVID*HHFGYE
Trigger: CTCATACCCGAAATGATGCCAATCGATTACAGGATG...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGGTACAGGTCTTGTCTaGACATTGTTCAAACCAATA +
Preference number: 4 (lower is better)
Translates to: RGKVASWRLRARCHRTESGTGLV*TLFKPI
Trigger: TATTGGTTTGAACAATGTCCAGACAAGACCTGTACC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCTCACATGAACATCAGTaGCTCATGCCAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPSHEHQ*LMPTAE
Trigger: CTCTGCTGTTGGCATGAGCCACTGATGTTCATGTGA...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGAGGGAGCTGGGTTCTaGTTTATGCGACGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPEGAGF*FMRRQR
Trigger: CCTCTGACGTCGCATAAACCAGAACCCAGCTCCCTC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCTGCCAACAGCAGAGCTaGCCATCAACAGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPCQQQS*PSTEEQ
Trigger: CTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCA...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCATTCGCTCCATATGGTaGCTGCGTTCTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPIRSIW*LRSLSA
Trigger: GGCACTCAAAGAACGCAGTCACCATATGGAGCGAAT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCACTAGCCAAAGTCTCTaGTTTTTCTTTGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPTSQSL*FFFVQP
Trigger: AGGCTGGACAAAGAAAAAGCAGAGACTTTGGCTAGT...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACATCCCAAATTCAGCTGTaGATGAGCCCTTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTSQIQL*MSPFCL
Trigger: CAAACAAAAAGGGCTCATGCACAGCTGAATTTGGGA...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTTCTTGCAGGGTTGCCTaGAGTTCCTCACTTGTACTG +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARSCRVA*SSSLVL
Trigger: CAGTACAAGTGAGGAACTCCAGGCAACCCTGCAAGA...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGTCACTGGCCACTGTaGCTTTGTATTCCTCTAACG +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGHWPL*LCIPLT
Trigger: CGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGGTGACTGCGTTCTTTaGGTGCCCCTATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPGDCVL*VPLSFL
Trigger: AAGAAATGATAGGGGCACTCAAAGAACGCAGTCACC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCTTTTCATTCTCCAGCTaGGCCTTCAGGCGATTCATC +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPFSFSS*AFRRFI
Trigger: GATGAATCGCCTGAAGGCTCAGCTGGAGAATGAAAA...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACAATGGTGCTATGCAGGTaGCAAACACAGTTATATTCT +
Preference number: 4 (lower is better)
Translates to: WLMPTAELAINRGTATKTMVLCR*QTQLYS
Trigger: AGAATATAACTGTGTTTGGCACCTGCATAGCACCAT...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CCA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCTCCCGAAGTCTTCTGTaGAGTGTCTTTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPSRSLL*SVFISL
Trigger: AAGAGAAATAAAGACACTCCACAGAAGACTTCGGGA...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCAGTTCCTGGGTAATCTaGTGTAAATCAGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPSSWVI*CKSASS
Trigger: AGAGCTAGCTGATTTACAGCAGATTACCCAGGAACT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCGCTGCTTTTCCTTTCTaGTCAGACTCAATAATTCGC +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPAAFPF*SDSIIR
Trigger: GCGAATTATTGAGTCTGAGCAGAAAGGAAAAGCAGC...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR GCA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTTATTCTAGAACATCGTaGTTGAATGCAGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: QCNFGTNRTGATFSSIARYSRTS*LNADPS
Trigger: TGAGGGGTCTGCATTCAAGCACGATGTTCTAGAATA...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
3UTR CAA 72 bp AGTTATATTCTCAAAGGTACAGGTCTTGTCTGGACATaGTTCAAACCAATAGCTACTGCGTTAGGCACACGG +
Preference number: 4 (lower is better)
Translates to: SYILKGTGLVWT*FKPIATALGTR
Trigger: CCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACAAGACCTGTACCTTTGAGAATATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR TCA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCATAATGAGGTTGTCATaGAGTTTCACAGCACGATGT +
Preference number: 4 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPIMRLS*SFTARC
Trigger: ACATCGTGCTGTGAAACTTCATGACAACCTCATTAT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp TTGGGCTGGGCGGTGAGCTCACCCGGTGGCTCAGCCGAGACCCGTTaGGTCCGGCCTCAGGAAAGCAGCCTACCCCGCAGCGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: LGWAVSSPGGSAETR*VRPQESSLPRSAAC
Trigger: GCAAGCGGCGCTGCGGGGTAGGCTGCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp TGCACCGCATCGCTCCCTCGCAATCTCCTGGTTTGGGCTGGGCGGTaGGCTCACCCGGTGGCTCAGCCGAGACCCGTTGAGTCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: CTASLPRNLLVWAGR*AHPVAQPRPVESGL
Trigger: GAGGCCGGACTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTCTTGGAGGTCCTGCCTaGGCCACGGAGGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLLGGPA*ATEGSG
Trigger: GCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAAG...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS CCA 90 bp TCCCCAAGAACACGCGCTGCACCGCATCGCTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAGCTCACCCGGTGGCTCAGCCGAGAC +
Preference number: 5 (lower is better)
Translates to: SPRTRAAPHRSLAIS*FGLGGELTRWLSRD
Trigger: GTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCAGCGCGTGTTCTTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS CCA 90 bp TCCCTCGCAATCTCCTGGTTTGGGCTGGGCGGTGAGCTCACCCGGTaGCTCAGCCGAGACCCGTTGAGTCCGGCCTCAGGAAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SLAISWFGLGGELTR*LSRDPLSPASGKQP
Trigger: AGGCTGCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTCTGAACACGCCTGGATaGTGTCGGCCGGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSLNTPG*CRPGQP
Trigger: GGGCTGTCCCGGCCGACACAATCCAGGCGTGTTCAG...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGCTGAACACGCCTGGATaGTGTCGGCCGGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPLNTPG*CRPGQP
Trigger: GGGCTGTCCCGGCCGACACAATCCAGGCGTGTTCAG...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTCCTGTGAGCCCCTCATaGCATCCAGTCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPPVSPS*HPVCGA
Trigger: TGCCCCACAGACTGGATGCAATGAGGGGCTCACAGG...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCCCATCGCAGGCACTCTaGGCAGGGAAGCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSPSQAL*AGKQAG
Trigger: GCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGG...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACCATCGCAGGCACTCTaGGCAGGGAAGCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPPSQAL*AGKQAG
Trigger: GCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACACCATCGCAGGCACTCTaGGCAGGGAAGCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTPSQAL*AGKQAG
Trigger: GCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGG...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGCTTGGAGGTCCTGCCTaGGCCACGGAGGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKLGGPA*ATEGSG
Trigger: GCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAAG...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp GCTCCCCTTCCGGGAGCGCTCTATGCTGGGGATGCCTTCCGACTCTaGGGAGGATGGTGCATCCAGCGCATCATCGCTCGATGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: APLPGALYAGDAFRL*GGWCIQRIIARCEG
Trigger: CCCCTCACATCGAGCGATGATGCGCTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp TGGCATTCCCGCTGCTCCCCTTCCGGGAGCGCTCTATGCTGGGGATaGCTTCCGACTCTGAGGAGGATGGTGCATCCAGCGCATCATCGC +
Preference number: 5 (lower is better)
Translates to: WHSRCSPSGSALCWG*LPTLRRMVHPAHHR
Trigger: GCGATGATGCGCTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 90 bp TTACAAGCAAATCGCGCTGCACCGCATCGCTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAGCTCACCCGGTGGCTCAGCCGAGAC +
Preference number: 5 (lower is better)
Translates to: LQANRAAPHRSLAIS*FGLGGELTRWLSRD
Trigger: GTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCAGCGCGATTTGCTTGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CAA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTGGGGCGTTCGAGGAATaGCAGCTGCAGCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSGAFEE*QLQQGL
Trigger: CAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCCC...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCCATCGCAGGCACTCTaGGCAGGGAAGCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: GSPELLEALQGCVANGVGPSQAL*AGKQAG
Trigger: GCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGCTGAACACGCCTGGATaGTGTCGGCCGGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKLNTPG*CRPGQP
Trigger: GGGCTGTCCCGGCCGACACAATCCAGGCGTGTTCAG...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCCTTGGAGGTCCTGCCTaGGCCACGGAGGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: WGSPELLEALQGCVANGVLGGPA*ATEGSG
Trigger: GCCACTGCCCTCCGTGGCCAAGGCAGGACCTCCAAG...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGCTGGAACCCTCTCCCTaGCAGCTCTGCACGCAAACC +
Preference number: 5 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPLEPSP*QLCTQT
Trigger: GGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCAG...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS GCA 90 bp ACACTTCACTGGCATTCCCGCTGCTCCCCTTCCGGGAGCGCTCTATaGTGGGGATGCCTTCCGACTCTGAGGAGGATGGTGCATCCAGCG +
Preference number: 5 (lower is better)
Translates to: TLHWHSRCSPSGSAL*WGCLPTLRRMVHPA
Trigger: CGCTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTGAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 90 bp CTTCACTGGCATTCCCGCTGCTCCCCTTCCGGGAGCGCTCTATGCTaGGGATGCCTTCCGACTCTGAGGAGGATGGTGCATCCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: LHWHSRCSPSGSALC*GCLPTLRRMVHPAH
Trigger: ATGCGCTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACTCAGCCGAGACCCGTaGAGTCCGGCCTCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPLSRDP*SPASGK
Trigger: CTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCTCAGCCGAGACCCGTaGAGTCCGGCCTCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRLSRDP*SPASGK
Trigger: CTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCCGCTCCTCCTCTTGCTaGCGTGACTTTATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: APVTASRQKAQPRECSSSRSSSC*RDFISS
Trigger: GGAGGAAATAAAGTCACGCAAGCAAGAGGAGGAGCG...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGGGCGTTCGAGGAATaGCAGCTGCAGCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: ALQGCVANGVGVARSLWRGAFEE*QLQQGL
Trigger: CAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCCC...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGGGGCGTTCGAGGAATaGCAGCTGCAGCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGGAFEE*QLQQGL
Trigger: CAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCCC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTTGGGGCAGCCCAGAGTaGCTGGAAGCTTTACAGGGG +
Preference number: 5 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRWGSPE*LEALQG
Trigger: CCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTGGGGCAGCCCAGAGTaGCTGGAAGCTTTACAGGGG +
Preference number: 5 (lower is better)
Translates to: LQGCVANGVGVARSLWRGWGSPE*LEALQG
Trigger: CCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTAGGCAAAGTGGCTTCTaGGAGACTTCGTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPRQSGF*ETSCQM
Trigger: CATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS GCA 90 bp CTCTACCTGGTGCCACAACAAACCTATGCTGGGAGCCTGAGCTTCTaGATCTGCACCAAGTACCCTGCACTAGGCCCGGCCACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LYLVPQQTYAGSLSF*ICTKYPALGPATLP
Trigger: GGGGAGGGTGGCCGGGCCTAGTGCAGGGTACTTGGTGCAGATGCAGAAGCTCAGGCTCCCAGCATAGGTTTGTTGTGGCACCAGGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS CCA 90 bp CCATCTGGTGTATCCGTTCAGTCAGGCAAGCCACGGACACTTCACTaGCATTCCCGCTGCTCCCCTTCCGGGAGCGCTCTATGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PSGVSVQSGKPRTLH*HSRCSPSGSALCWG
Trigger: TCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTGAAGTGTCCGTGGCTTGCCTGACTGAACGGATACACCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCATCGCAATCTCCTGGTTaGGGCTGGGCGGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPSQSPG*GWAVSS
Trigger: TGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGA...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTCAGCTGCAGCAGGGTTaGGTACTTGAGATGCACTGT +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLQLQQG*VLEMHC
Trigger: ACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCTG...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGGGGGCGTTCGAGGAATaGCAGCTGCAGCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LEALQGCVANGVGVARSLGAFEE*QLQQGL
Trigger: CAAACCCTGCTGCAGCTGCAATTCCTCGAACGCCCC...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGACACTGAGAGGGTCTaGGCACTTTCCATCGCAGGC +
Preference number: 5 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGDTERV*ALSIAG
Trigger: GCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGTC...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAAGACACTGAGAGGGTCTaGGCACTTTCCATCGCAGGC +
Preference number: 5 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQDTERV*ALSIAG
Trigger: GCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGTC...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTGGGGCAGCCCAGAGTaGCTGGAAGCTTTACAGGGG +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVAWGSPE*LEALQG
Trigger: CCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGGTGCATGAGCCCTTTTaGTTTGGTGCCCTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPVHEPF*FGALEH
Trigger: GTGCTCCAGGGCACCAAACAAAAAGGGCTCATGCAC...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGCCTGTGAGCCCCTCATaGCATCCAGTCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKPVSPS*HPVCGA
Trigger: TGCCCCACAGACTGGATGCAATGAGGGGCTCACAGG...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTCTAGAACATCGTGCTaGAATGCAGACCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLSRTSC*NADPSA
Trigger: GGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAGA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCTGGAACCCTCTCCCTaGCAGCTCTGCACGCAAACC +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVALEPSP*QLCTQT
Trigger: GGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCAG...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCTGGAACCCTCTCCCTaGCAGCTCTGCACGCAAACC +
Preference number: 5 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVLEPSP*QLCTQT
Trigger: GGTTTGCGTGCAGAGCTGCAAGGGAGAGGGTTCCAG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGACGGTCTCTGGGGTCTaGGCATCTGTCACAGAACCC +
Preference number: 5 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELTVSGV*ASVTEP
Trigger: GGGTTCTGTGACAGATGCCAAGACCCCAGAGACCGT...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS CCA 90 bp GGTGGGAGTCACAGATGCCGTTGGAGAAGAGGACAGGGAAAGCTGTaGAGACGTGGTTCCCATAGCCATCAGAGAGGCTGGCGACGCTCC +
Preference number: 5 (lower is better)
Translates to: GGSHRCRWRRGQGKL*RRGSHSHQRGWRRS
Trigger: GGAGCGTCGCCAGCCTCTCTGATGGCTATGGGAACCACGTCTCCACAGCTTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCTCAGCCGAGACCCGTaGAGTCCGGCCTCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: PELLEALQGCVANGVGVALSRDP*SPASGK
Trigger: CTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTCTCACTTGTACTGTGTaGGTTCTCTTCCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPLTCTV*VLFHLV
Trigger: CACCAGATGGAAGAGAACCAACACAGTACAAGTGAG...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGCAGCTGCAGCAGGGTTaGGTACTTGAGATGCACTGT +
Preference number: 5 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPQLQQG*VLEMHC
Trigger: ACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCTG...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGGACACTGAGAGGGTCTaGGCACTTTCCATCGCAGGC +
Preference number: 5 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGDTERV*ALSIAG
Trigger: GCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGTC...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTGGGGCAGCCCAGAGTaGCTGGAAGCTTTACAGGGG +
Preference number: 5 (lower is better)
Translates to: ELLEALQGCVANGVGVARWGSPE*LEALQG
Trigger: CCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCGTGCATGAGCCCTTTTaGTTTGGTGCCCTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVVHEPF*FGALEH
Trigger: GTGCTCCAGGGCACCAAACAAAAAGGGCTCATGCAC...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GTGGGAGCTGTGGGCCACACGGCTGAGTTCTTCCAATACGGAAGCCCCGAGCTGGTGCATGAGCCCTTTTaGTTTGGTGCCCTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: VGAVGHTAEFFQYGSPELVHEPF*FGALEH
Trigger: GTGCTCCAGGGCACCAAACAAAAAGGGCTCATGCAC...CAGCTCGGGGCTTCCGTATTGGAAGAACTCAGCCGTGTGGCCCACAGCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGCCTGTGAGCCCCTCATaGCATCCAGTCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: ELLEALQGCVANGVGVARPVSPS*HPVCGA
Trigger: TGCCCCACAGACTGGATGCAATGAGGGGCTCACAGG...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTACGGTCTCTGGGGTCTaGGCATCTGTCACAGAACCC +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVATVSGV*ASVTEP
Trigger: GGGTTCTGTGACAGATGCCAAGACCCCAGAGACCGT...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAGGTCATCACTGCTCTaGGTCTGGGCAAAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGRSSLL*VWAKWH
Trigger: GTGCCACTTTGCCCAGACCAAGAGCAGTGATGACCT...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTCACTGCTCTTGGTCTTaGACAATGATGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLHCSWS*TMMLLF
Trigger: GAACAGCAGCATCATTGTCAAAGACCAAGAGCAGTG...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CAA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTGTAGAAGTGCTCCGCTaGGTTGAAGAAGCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: LQGCVANGVGVARSLWRGVEVLR*VEEAVP
Trigger: AGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTAC...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TCTGGGCTGTGTAGGGGCTTCCGCTCTCCTGGGGGTAGCTCTGCCACGGTCTCTAGAAGATCCTTCACTTaGGCCTCCAAAGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SGLCRGFRSPGGSSATVSRRSFT*ASKAAL
Trigger: CAGAGCTGCTTTGGAGGCCAAAGTGAAGGATCTTCT...AGAGACCGTGGCAGAGCTACCCCCAGGAGAGCGGAAGCCCCTACACAGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGCTAGCTCTTGCAGGGTaGCCTGGAGTTCCTCACTTG +
Preference number: 5 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGLALAG*PGVPHL
Trigger: CAAGTGAGGAACTCCAGGCAACCCTGCAAGAGCTAG...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCTAGCTCTTGCAGGGTaGCCTGGAGTTCCTCACTTG +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRLALAG*PGVPHL
Trigger: CAAGTGAGGAACTCCAGGCAACCCTGCAAGAGCTAG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACTAGCTCTTGCAGGGTaGCCTGGAGTTCCTCACTTG +
Preference number: 5 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPLALAG*PGVPHL
Trigger: CAAGTGAGGAACTCCAGGCAACCCTGCAAGAGCTAG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCCTGGCCACTGTGGCTTaGTATTCCTCTAACGTGGCT +
Preference number: 5 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVLATVA*YSSNVA
Trigger: AGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAG...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGCTGGCCACTGTGGCTTaGTATTCCTCTAACGTGGCT +
Preference number: 5 (lower is better)
Translates to: ALQGCVANGVGVARSLWRLATVA*YSSNVA
Trigger: AGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAG...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCCGCTCCTCCTCTTGCTaGCGTGACTTTATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVRSSSC*RDFISS
Trigger: GGAGGAAATAAAGTCACGCAAGCAAGAGGAGGAGCG...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCAGCTGCAGCAGGGTTaGGTACTTGAGATGCACTGT +
Preference number: 5 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGQLQQG*VLEMHC
Trigger: ACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCTG...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTCAGGGGTTTGGATGTaGAGATTGGTCCACTTATGG +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLSGVWM*RLVHLW
Trigger: CCATAAGTGGACCAATCTCAACATCCAAACCCCTGA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAATCTAGAACATCGTGCTaGAATGCAGACCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQSRTSC*NADPSA
Trigger: GGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAGA...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACACAGCAAGGGATAAAGTaGGGAACTGCAGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTQQGIK*GTADQG
Trigger: CCCCTGGTCTGCAGTTCCCAACTTTATCCCTTGCTG...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGAGGCAAAGTGGCTTCTaGGAGACTTCGTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: ALQGCVANGVGVARSLWRRQSGF*ETSCQM
Trigger: CATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCT...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTAGGTCATCACTGCTCTaGGTCTTTGACAATGATGCT +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLRSSLL*VFDNDA
Trigger: AGCATCATTGTCAAAGACCAAGAGCAGTGATGACCT...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CAA 90 bp CTGGGACTCCAAACCCCTTCCAGGCTGGAAGACAGGTCGCTGAGTCCAGGCAAGGTAGAAGTGCTCCGCTaGGTTGAAGAAGCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: LGLQTPSRLEDRSLSPGKVEVLR*VEEAVP
Trigger: AGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTAC...CTTGCCTGGACTCAGCGACCTGTCTTCCAGCCTGGAAGGGGTTTGGAGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTAGAAGTGCTCCGCTaGGTTGAAGAAGCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRVEVLR*VEEAVP
Trigger: AGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTAC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCCGTAACTGCTTCCCGCCAGAAAGCCCAGCCGCGTGAGTGCAGCAGCAGCGCAGAAGGTAGTTTTTaGCTCTGGTTTAATCGGGTA +
Preference number: 5 (lower is better)
Translates to: APVTASRQKAQPRECSSSAEGSF*LWFNRV
Trigger: TACCCGATTAAACCAGAGCAAAAAACTACCTTCTGC...GCTGCTGCTGCACTCACGCGGCTGGGCTTTCTGGCGGGAAGCAGTTACGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGCGACTGCGGGAACGTTaGGCCAATGCCATGTCATTA +
Preference number: 5 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGRLRER*ANAMSL
Trigger: TAATGACATGGCATTGGCCAAACGTTCCCGCAGTCG...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCGACTGCGGGAACGTTaGGCCAATGCCATGTCATTA +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVARLRER*ANAMSL
Trigger: TAATGACATGGCATTGGCCAAACGTTCCCGCAGTCG...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAAAGAAGATCCTTCACTTaGGCCTCCAAAGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQRRSFT*ASKAAL
Trigger: CAGAGCTGCTTTGGAGGCCAAAGTGAAGGATCTTCT...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTCTGGCCACTGTGGCTTaGTATTCCTCTAACGTGGCT +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVALATVA*YSSNVA
Trigger: AGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAG...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCACGCTCCTCCTCTTGCTaGCGTGACTTTATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPRSSSC*RDFISS
Trigger: GGAGGAAATAAAGTCACGCAAGCAAGAGGAGGAGCG...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGAGGGCTGTCAGGGGTTaGGATGTTGAGATTGGTCCA +
Preference number: 5 (lower is better)
Translates to: LEALQGCVANGVGVARSLRAVRG*DVEIGP
Trigger: TGGACCAATCTCAACATCCAAACCCCTGACAGCCCT...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCAGGGCTGTCAGGGGTTaGGATGTTGAGATTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSRAVRG*DVEIGP
Trigger: TGGACCAATCTCAACATCCAAACCCCTGACAGCCCT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGCTGTCAGGGGTTaGGATGTTGAGATTGGTCCA +
Preference number: 5 (lower is better)
Translates to: EALQGCVANGVGVARSLWRAVRG*DVEIGP
Trigger: TGGACCAATCTCAACATCCAAACCCCTGACAGCCCT...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGGAGTCACAGATGCCGTaGGAGAAGAGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGESQMP*EKRTGK
Trigger: TTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTC...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGAGTCACAGATGCCGTaGGAGAAGAGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRESQMP*EKRTGK
Trigger: TTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTGGTCTTGTCTGGACATaGTTCAAACCAATAGCTACT +
Preference number: 5 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPGLVWT*FKPIAT
Trigger: AGTAGCTATTGGTTTGAACAATGTCCAGACAAGACC...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATCTAGAACATCGTGCTaGAATGCAGACCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: WGSDPASTGGWSSSWCYASRTSC*NADPSA
Trigger: GGCTGAGGGGTCTGCATTCAAGCACGATGTTCTAGA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGCAGCACCCCAGCCCTGGCGTGCCCGCACCACGCCCTCTAGATACTCTCCTAAAAAGTTTATCTGGTaGCCTCTGGGTAGGATACCT +
Preference number: 5 (lower is better)
Translates to: AAAPQPWRARTTPSRYSPKKFIW*PLGRIP
Trigger: AGGTATCCTACCCAGAGGCAACCAGATAAACTTTTT...AGGAGAGTATCTAGAGGGCGTGGTGCGGGCACGCCAGGGCTGGGGTGCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS CCA 90 bp CAGGGAAAGCTGTGGAGACGTGGTTCCCATAGCCATCAGAGAGGCTaGCGACGCTCCCTCCTGTGCAGAAATGTCCCGTTTCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGKLWRRGSHSHQRG*RRSLLCRNVPFHFF
Trigger: GAAGAAGTGAAACGGGACATTTCTGCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCTATGGGAACCACGTCTCCACAGCTTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGATCGCAATCTCCTGGTTaGGGCTGGGCGGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRSQSPG*GWAVSS
Trigger: TGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGA...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCCCAGGTTTTACAAGTTaGCCTCCCGTAGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVPGFTS*PPVDAE
Trigger: TTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGG...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCCAGGTTTTACAAGTTaGCCTCCCGTAGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGPGFTS*PPVDAE
Trigger: TTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGG...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCGACTGCGGGAACGTTaGGCCAATGCCATGTCATTA +
Preference number: 5 (lower is better)
Translates to: GSPELLEALQGCVANGVGRLRER*ANAMSL
Trigger: TAATGACATGGCATTGGCCAAACGTTCCCGCAGTCG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGAAGATCCTTCACTTaGGCCTCCAAAGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: EALQGCVANGVGVARSLWRRSFT*ASKAAL
Trigger: CAGAGCTGCTTTGGAGGCCAAAGTGAAGGATCTTCT...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTTTCTTAGCTTCTTCTaGGAAGGCTCGGTATTCATC +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLFLSFF*EGSVFI
Trigger: GATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAAA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTCGCTCCTCCTCTTGCTaGCGTGACTTTATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GSPELLEALQGCVANGVGRSSSC*RDFISS
Trigger: GGAGGAAATAAAGTCACGCAAGCAAGAGGAGGAGCG...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCCAGCTGCAGCAGGGTTaGGTACTTGAGATGCACTGT +
Preference number: 5 (lower is better)
Translates to: WGSPELLEALQGCVANGVQLQQG*VLEMHC
Trigger: ACAGTGCATCTCAAGTACCAAACCCTGCTGCAGCTG...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTGGATTTCCCCATAGTTaGGTCTCTTATCTGACAGGG +
Preference number: 5 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRGFPHS*VSYLTG
Trigger: CCCTGTCAGATAAGAGACCAAACTATGGGGAAATCC...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGAGTCACAGATGCCGTaGGAGAAGAGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: GSPELLEALQGCVANGVGESQMP*EKRTGK
Trigger: TTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTC...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGAGTCACAGATGCCGTaGGAGAAGAGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: WGSPELLEALQGCVANGVESQMP*EKRTGK
Trigger: TTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCAAGGCGTTCCTCTTaGATCCTCCATATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRARRSS*ILHILW
Trigger: CCAGAGAATATGGAGGATCAAAGAGGAACGCCTTGC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGGCAAGGCGTTCCTCTTaGATCCTCCATATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LEALQGCVANGVGVARSLARRSS*ILHILW
Trigger: CCAGAGAATATGGAGGATCAAAGAGGAACGCCTTGC...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTATGTCCAGTGTGGATTaGATGCCGACACTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LQGCVANGVGVARSLWRGMSSVD*MPTLSA
Trigger: AGCTGAAAGTGTCGGCATCAAATCCACACTGGACAT...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTCCTTTAAATAAGGCTTaGGTTCAAACAGCATGGACC +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLPLNKA*VQTAWT
Trigger: GGTCCATGCTGTTTGAACCAAAGCCTTATTTAAAGG...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCAGCAAGGGATAAAGTaGGGAACTGCAGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: PELLEALQGCVANGVGVAQQGIK*GTADQG
Trigger: CCCCTGGTCTGCAGTTCCCAACTTTATCCCTTGCTG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp CCGACTCTGAGGAGGATGGTGCATCCAGCGCATCATCGCTCGATGTaGGGGGCTGGTAGACCTCACTGCACTCACTGTCTAAATTGTCCA +
Preference number: 5 (lower is better)
Translates to: PTLRRMVHPAHHRSM*GAGRPHCTHCLNCP
Trigger: TGGACAATTTAGACAGTGAGTGCAGTGAGGTCTACCAGCCCCTCACATCGAGCGATGATGCGCTGGATGCACCATCCTCCTCAGAGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp CGTGGTTCCCATAGCCATCAGAGAGGCTGGCGACGCTCCCTCCTGTaGAGAAATGTCCCGTTTCACTTCTTCACTACTTCGTCGAGACAC +
Preference number: 5 (lower is better)
Translates to: RGSHSHQRGWRRSLL*RNVPFHFFTTSSRH
Trigger: GTGTCTCGACGAAGTAGTGAAGAAGTGAAACGGGACATTTCTGCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCTATGGGAACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp CCCACCAACACCCGTTCTTTCCTCACTCCTGAAGAATCCTACTTCTaGCGCACCAATGCTGTGGCACCTGAACACGCACCCCCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: PTNTRSFLTPEESYF*RTNAVAPEHAPPKA
Trigger: AGCTTTTGGGGGTGCGTGTTCAGGTGCCACAGCATTGGTGCGGCAGAAGTAGGATTCTTCAGGAGTGAGGAAAGAACGGGTGTTGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS CCA 90 bp GAAGGACGACACTCACCTCTACCTGGTGCCACAACAAACCTATGCTaGGAGCCTGAGCTTCTGCATCTGCACCAAGTACCCTGCACTAGG +
Preference number: 5 (lower is better)
Translates to: EGRHSPLPGATTNLC*EPELLHLHQVPCTR
Trigger: CCTAGTGCAGGGTACTTGGTGCAGATGCAGAAGCTCAGGCTCCCAGCATAGGTTTGTTGTGGCACCAGGTAGAGGTGAGTGTCGTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCCAGGTTTTACAAGTTaGCCTCCCGTAGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRPGFTS*PPVDAE
Trigger: TTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCACACTGCTCTTGGTCTTaGACAATGATGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WGSDPASTGGWSSSWCYAHCSWS*TMMLLF
Trigger: GAACAGCAGCATCATTGTCAAAGACCAAGAGCAGTG...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGAGAAGATCCTTCACTTaGGCCTCCAAAGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: ELLEALQGCVANGVGVARRRSFT*ASKAAL
Trigger: CAGAGCTGCTTTGGAGGCCAAAGTGAAGGATCTTCT...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCACTCACTGTCTAAATaGTCCATGGAGTTACTGTGC +
Preference number: 5 (lower is better)
Translates to: LQGCVANGVGVARSLWRGHSLSK*SMELLC
Trigger: GCACAGTAACTCCATGGACAATTTAGACAGTGAGTG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGCTCACTTGTACTGTGTaGGTTCTCTTCCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRLTCTV*VLFHLV
Trigger: CACCAGATGGAAGAGAACCAACACAGTACAAGTGAG...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCTAGCTCTTGCAGGGTaGCCTGGAGTTCCTCACTTG +
Preference number: 5 (lower is better)
Translates to: RGKVASWRLRARCHRTESLALAG*PGVPHL
Trigger: CAAGTGAGGAACTCCAGGCAACCCTGCAAGAGCTAG...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCCCCGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTTTCACAGCACGATGTaGTTCTACTTCATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: APSWRLTRCGAAQSCWKLFHSTM*FYFIFK
Trigger: CTTGAAGATGAAGTAGAACAACATCGTGCTGTGAAA...AAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCAGCAGGGTTTGGTACTaGAGATGCACTGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSSRVWY*RCTVKG
Trigger: TCCTTTGACAGTGCATCTCAAGTACCAAACCCTGCT...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCATCAGGGGTTTGGATGTaGAGATTGGTCCACTTATGG +
Preference number: 5 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPSGVWM*RLVHLW
Trigger: CCATAAGTGGACCAATCTCAACATCCAAACCCCTGA...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGGATTTCCCCATAGTTaGGTCTCTTATCTGACAGGG +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVAGFPHS*VSYLTG
Trigger: CCCTGTCAGATAAGAGACCAAACTATGGGGAAATCC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGATTTCCCCATAGTTaGGTCTCTTATCTGACAGGG +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRGFPHS*VSYLTG
Trigger: CCCTGTCAGATAAGAGACCAAACTATGGGGAAATCC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGATGTCCAGTGTGGATTaGATGCCGACACTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LEALQGCVANGVGVARSLMSSVD*MPTLSA
Trigger: AGCTGAAAGTGTCGGCATCAAATCCACACTGGACAT...CAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGATGTCCAGTGTGGATTaGATGCCGACACTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: EALQGCVANGVGVARSLWMSSVD*MPTLSA
Trigger: AGCTGAAAGTGTCGGCATCAAATCCACACTGGACAT...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGTCAAAGGTACAGGTCTaGTCTGGACATTGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPSKVQV*SGHCSN
Trigger: GTTTGAACAATGTCCAGACAAGACCTGTACCTTTGA...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCAGCAAGGGATAAAGTaGGGAACTGCAGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: RGKVASWRLRARCHRTESQQGIK*GTADQG
Trigger: CCCCTGGTCTGCAGTTCCCAACTTTATCCCTTGCTG...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS GCA 90 bp TCTGAAGGACGACACTCACCTCTACCTGGTGCCACAACAAACCTATaGTGGGAGCCTGAGCTTCTGCATCTGCACCAAGTACCCTGCACT +
Preference number: 5 (lower is better)
Translates to: SEGRHSPLPGATTNL*WEPELLHLHQVPCT
Trigger: AGTGCAGGGTACTTGGTGCAGATGCAGAAGCTCAGGCTCCCAGCATAGGTTTGTTGTGGCACCAGGTAGAGGTGAGTGTCGTCCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS CCA 90 bp TGGCACTTTCCATCGCAGGCACTCTTGGCAGGGAAGCAGGCCGGCTaGCTGAAGATGTTCTTAACAGATGCTCTTGAACAGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: WHFPSQALLAGKQAG*LKMFLTDALEQGFP
Trigger: GGGAAATCCCTGTTCAAGAGCATCTGTTAAGAACATCTTCAGCCAGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGGAAAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 90 bp TTCTTCTCTTATTCGGCTTCGGGTGGTGGGAGTCACAGATGCCGTTaGAGAAGAGGACAGGGAAAGCTGTGGAGACGTGGTTCCCATAGC +
Preference number: 5 (lower is better)
Translates to: FFSYSASGGGSHRCR*RRGQGKLWRRGSHS
Trigger: GCTATGGGAACCACGTCTCCACAGCTTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACCACCCGAAGCCGAATAAGAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCCACTGCTCTTGGTCTTaGACAATGATGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WGSPELLEALQGCVANGVHCSWS*TMMLLF
Trigger: GAACAGCAGCATCATTGTCAAAGACCAAGAGCAGTG...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CAA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGAGGTCATCACTGCTCTaGGTCTTTGACAATGATGCT +
Preference number: 5 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGRSSLL*VFDNDA
Trigger: AGCATCATTGTCAAAGACCAAGAGCAGTGATGACCT...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTTTGTCTGACTTAGACTaGCTCATACGAACGTCACAT +
Preference number: 5 (lower is better)
Translates to: LQGCVANGVGVARSLWRGLSDLD*LIRTSH
Trigger: ATGTGACGTTCGTATGAGCAAGTCTAAGTCAGACAA...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCATGTGGGAGGGGCACTCACTGTCTAAATaGTCCATGGAGTTACTGTGC +
Preference number: 5 (lower is better)
Translates to: AGCVLSPHDLNGRVMWEGHSLSK*SMELLC
Trigger: GCACAGTAACTCCATGGACAATTTAGACAGTGAGTG...CCCCTCCCACATGACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGCACTCACTGTCTAAATaGTCCATGGAGTTACTGTGC +
Preference number: 5 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVHSLSK*SMELLC
Trigger: GCACAGTAACTCCATGGACAATTTAGACAGTGAGTG...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGCACTCACTGTCTAAATaGTCCATGGAGTTACTGTGC +
Preference number: 5 (lower is better)
Translates to: EALQGCVANGVGVARSLWHSLSK*SMELLC
Trigger: GCACAGTAACTCCATGGACAATTTAGACAGTGAGTG...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTGCCCCTATCATTTCTaGAGCTTCCTTATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGCPYHF*SFLIVL
Trigger: CAAGACAATAAGGAAGCTCAAGAAATGATAGGGGCA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTTTCTTAGCTTCTTCTaGGAAGGCTCGGTATTCATC +
Preference number: 5 (lower is better)
Translates to: AGGSHAVGQPRVAGSFTGFLSFF*EGSVFI
Trigger: GATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAAA...CCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAAATCACCAATCTCCTCTaGGGCTTCAGATTTAATGTC +
Preference number: 5 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQITNLL*GFRFNV
Trigger: GACATTAAATCTGAAGCCCAAGAGGAGATTGGTGAT...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGCACTGTCAAAGGACTaGATGAGGGTTTTTACTGTA +
Preference number: 5 (lower is better)
Translates to: ALQGCVANGVGVARSLWRALSKD*MRVFTV
Trigger: TACAGTAAAAACCCTCATCAAGTCCTTTGACAGTGC...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCCACCGGCCTGCAGGATGTGTGCTGAGCCCACATGACCTGAATGGACGGGTCGTTTGGATGTTGAGATaGGTCCACTTATGGAATGTC +
Preference number: 5 (lower is better)
Translates to: SHRPAGCVLSPHDLNGRVVWMLR*VHLWNV
Trigger: GACATTCCATAAGTGGACCAATCTCAACATCCAAAC...GACCCGTCCATTCAGGTCATGTGGGCTCAGCACACATCCTGCAGGCCGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGTTTGGATGTTGAGATaGGTCCACTTATGGAATGTC +
Preference number: 5 (lower is better)
Translates to: ALQGCVANGVGVARSLWRVWMLR*VHLWNV
Trigger: GACATTCCATAAGTGGACCAATCTCAACATCCAAAC...CCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTTCAGGGGTTTGGATGTaGAGATTGGTCCACTTATGG +
Preference number: 5 (lower is better)
Translates to: GSPELLEALQGCVANGVGSGVWM*RLVHLW
Trigger: CCATAAGTGGACCAATCTCAACATCCAAACCCCTGA...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGGGATTTCCCCATAGTTaGGTCTCTTATCTGACAGGG +
Preference number: 5 (lower is better)
Translates to: ELLEALQGCVANGVGVARGFPHS*VSYLTG
Trigger: CCCTGTCAGATAAGAGACCAAACTATGGGGAAATCC...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTGCAAGGCGTTCCTCTTaGATCCTCCATATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PELLEALQGCVANGVGVAARRSS*ILHILW
Trigger: CCAGAGAATATGGAGGATCAAAGAGGAACGCCTTGC...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TTCTCACCAGCACCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGCTGGGCTCCCTAAAGTaGTTTACTTTTCTCCTATTT +
Preference number: 5 (lower is better)
Translates to: FSPAPEPTPANSQEVPRPLGSLK*FTFLLF
Trigger: AAATAGGAGAAAAGTAAACAACTTTAGGGAGCCCAG...CGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGGTGCTGGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS GCA 90 bp TTTCCTTTCTTCTCTTATTCGGCTTCGGGTGGTGGGAGTCACAGATaGCGTTGGAGAAGAGGACAGGGAAAGCTGTGGAGACGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: FPFFSYSASGGGSHR*RWRRGQGKLWRRGS
Trigger: GGAACCACGTCTCCACAGCTTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACCACCCGAAGCCGAATAAGAGAAGAAAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 90 bp GCTAGCTCTTGCAGGGTTGCCTGGAGTTCCTCACTTGTACTGTGTTaGTTCTCTTCCATCTGGTGTATCCGTTCAGTCAGGCAAGCCACG +
Preference number: 5 (lower is better)
Translates to: ASSCRVAWSSSLVLC*FSSIWCIRSVRQAT
Trigger: CGTGGCTTGCCTGACTGAACGGATACACCAGATGGAAGAGAACCAACACAGTACAAGTGAGGAACTCCAGGCAACCCTGCAAGAGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 90 bp CATTCTCCAGCTGAGCCTTCAGGCGATTCATCTCTATCTGGTCACTaGCCACTGTGGCTTTGTATTCCTCTAACGTGGCTGCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: HSPAEPSGDSSLSGH*PLWLCIPLTWLPRL
Trigger: CAGCCTTGGCAGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACCAGATAGAGATGAATCGCCTGAAGGCTCAGCTGGAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCAGGTCATCACTGCTCTaGGTCTTTGACAATGATGCT +
Preference number: 5 (lower is better)
Translates to: LWGSPELLEALQGCVANGRSSLL*VFDNDA
Trigger: AGCATCATTGTCAAAGACCAAGAGCAGTGATGACCT...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGCAGAAGGTAGTTTTTaGCTCTGGTTTAATCGGGTA +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRAEGSF*LWFNRV
Trigger: TACCCGATTAAACCAGAGCAAAAAACTACCTTCTGC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
CDS-3UTR CAA 90 bp CCGGAACCCACCCCAGCCAATAGTCAGGAAGTGCCGCGGCCGAGCCTTCATCAAAAAATTTCTACGTCTTaGGTTTTTGCCAGCGTGAGA +
Preference number: 5 (lower is better)
Translates to: PEPTPANSQEVPRPSLHQKISTS*VFASVR
Trigger: TCTCACGCTGGCAAAAACCAAAGACGTAGAAATTTT...TTGATGAAGGCTCGGCCGCGGCACTTCCTGACTATTGGCTGGGGTGGGTTCCGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTGCCATTTTCAAAGTATaGCTTAAATGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: LQGCVANGVGVARSLWRGAIFKV*LKCCWT
Trigger: TGTCCAGCAGCATTTAAGCAATACTTTGAAAATGGC...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTGCCCCTATCATTTCTaGAGCTTCCTTATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: EALQGCVANGVGVARSLWCPYHF*SFLIVL
Trigger: CAAGACAATAAGGAAGCTCAAGAAATGATAGGGGCA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AACATGCTCCTCCAAACTAGGACGGTGAAGGGCCCAGGGCGCTGGGAACTGCCATGCCCCTATCATTTCTaGAGCTTCCTTATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: NMLLQTRTVKGPGRWELPCPYHF*SFLIVL
Trigger: CAAGACAATAAGGAAGCTCAAGAAATGATAGGGGCA...TGGCAGTTCCCAGCGCCCTGGGCCCTTCACCGTCCTAGTTTGGAGGAGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTTCTTAGCTTCTTCTaGGAAGGCTCGGTATTCATC +
Preference number: 5 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSFLSFF*EGSVFI
Trigger: GATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAAA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGCACTGTCAAAGGACTaGATGAGGGTTTTTACTGTA +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVAALSKD*MRVFTV
Trigger: TACAGTAAAAACCCTCATCAAGTCCTTTGACAGTGC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGTTTGGATGTTGAGATaGGTCCACTTATGGAATGTC +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRVWMLR*VHLWNV
Trigger: GACATTCCATAAGTGGACCAATCTCAACATCCAAAC...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCGACACTGAGAGGGTCTaGGCACTTTCCATCGCAGGC +
Preference number: 5 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPDTERV*ALSIAG
Trigger: GCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGTC...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTCGACCTTTTCCAGCATaGCTCGTAACAAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: GSHAVGQPRVAGSFTGVRRPFPA*LVTKQK
Trigger: TTTTTGTTTTGTTACGAGCAATGCTGGAAAAGGTCG...ACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGAGGGGTCTGGGCTCCCTAAAGTaGTTTACTTTTCTCCTATTT +
Preference number: 5 (lower is better)
Translates to: LQGCVANGVGVARSLWRGLGSLK*FTFLLF
Trigger: AAATAGGAGAAAAGTAAACAACTTTAGGGAGCCCAG...ACCCCTCCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCAGGTGGGTCTTGTCTGGACATaGTTCAAACCAATAGCTACT +
Preference number: 5 (lower is better)
Translates to: AVTPLPLVAGLPHGAMQVGLVWT*FKPIAT
Trigger: AGTAGCTATTGGTTTGAACAATGTCCAGACAAGACC...CACCTGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTCAAAGGTACAGGTCTaGTCTGGACATTGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: EALQGCVANGVGVARSLWSKVQV*SGHCSN
Trigger: GTTTGAACAATGTCCAGACAAGACCTGTACCTTTGA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGTGACCCCGCTTCCACTGGTGGCTGGTCTTCCTCATGGTGCTATGCATCAAAGGTACAGGTCTaGTCTGGACATTGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: WGSDPASTGGWSSSWCYASKVQV*SGHCSN
Trigger: GTTTGAACAATGTCCAGACAAGACCTGTACCTTTGA...TGCATAGCACCATGAGGAAGACCAGCCACCAGTGGAAGCGGGGTCACTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS GCA 90 bp AACGTCACATTCTGTAGCAGTTCGACTGCGGGAACGTTTGGCCAATaGCATGTCATTAGCTCCCTGACCTGTAGAAGTGCTCCGCTTGGT +
Preference number: 5 (lower is better)
Translates to: NVTFCSSSTAGTFGQ*HVISSLTCRSAPLG
Trigger: ACCAAGCGGAGCACTTCTACAGGTCAGGGAGCTAATGACATGGCATTGGCCAAACGTTCCCGCAGTCGAACTGCTACAGAATGTGACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS CCA 90 bp GTTGCCTGGAGTTCCTCACTTGTACTGTGTTGGTTCTCTTCCATCTaGTGTATCCGTTCAGTCAGGCAAGCCACGGACACTTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: VAWSSSLVLCWFSSI*CIRSVRQATDTSLA
Trigger: TGCCAGTGAAGTGTCCGTGGCTTGCCTGACTGAACGGATACACCAGATGGAAGAGAACCAACACAGTACAAGTGAGGAACTCCAGGCAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 90 bp GCTGAGCCTTCAGGCGATTCATCTCTATCTGGTCACTGGCCACTGTaGCTTTGTATTCCTCTAACGTGGCTGCCAAGGCTGCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: AEPSGDSSLSGHWPL*LCIPLTWLPRLLFL
Trigger: AAGGAAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACCAGATAGAGATGAATCGCCTGAAGGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CGAGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAAAAATTTCTACGTCTTaGGTTTTTGCCAGCGTGAGA +
Preference number: 5 (lower is better)
Translates to: RAGGSHAVGQPRVAGSFTKISTS*VFASVR
Trigger: TCTCACGCTGGCAAAAACCAAAGACGTAGAAATTTT...TGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGAAAATTTCTACGTCTTaGGTTTTTGCCAGCGTGAGA +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRKISTS*VFASVR
Trigger: TCTCACGCTGGCAAAAACCAAAGACGTAGAAATTTT...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp AGCTGGAGGCTCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGAACAGTTTTTCAGAATaGTCTAACCTCTGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: SWRLTRCGAAQSCWKLYRNSFSE*SNLCSR
Trigger: CCTAGAGCAGAGGTTAGACAATTCTGAAAAACTGTT...CCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGAGCCTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTGCCATTTTCAAAGTATaGCTTAAATGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: HTLWGSPELLEALQGCVAAIFKV*LKCCWT
Trigger: TGTCCAGCAGCATTTAAGCAATACTTTGAAAATGGC...AGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCTTTCTTAGCTTCTTCTaGGAAGGCTCGGTATTCATC +
Preference number: 5 (lower is better)
Translates to: WGSPELLEALQGCVANGVFLSFF*EGSVFI
Trigger: GATGAATACCGAGCCTTCCAAGAAGAAGCTAAGAAA...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TCACACGCTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTTTCACAGCACGATGTaGTTCTACTTCATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SHAVGQPRVAGSFTGVRSFHSTM*FYFIFK
Trigger: CTTGAAGATGAAGTAGAACAACATCGTGCTGTGAAA...GCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAGCGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGTCGCTGTGGTTTCACAGCACGATGTaGTTCTACTTCATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: EALQGCVANGVGVARSLWFHSTM*FYFIFK
Trigger: CTTGAAGATGAAGTAGAACAACATCGTGCTGTGAAA...CCACAGCGACCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTATCACCAATCTCCTCTaGGGCTTCAGATTTAATGTC +
Preference number: 5 (lower is better)
Translates to: GSPELLEALQGCVANGVGITNLL*GFRFNV
Trigger: GACATTAAATCTGAAGCCCAAGAGGAGATTGGTGAT...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCATCACCAATCTCCTCTaGGGCTTCAGATTTAATGTC +
Preference number: 5 (lower is better)
Translates to: LWGSPELLEALQGCVANGITNLL*GFRFNV
Trigger: GACATTAAATCTGAAGCCCAAGAGGAGATTGGTGAT...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGCACTGTCAAAGGACTaGATGAGGGTTTTTACTGTA +
Preference number: 5 (lower is better)
Translates to: LWGSPELLEALQGCVANGALSKD*MRVFTV
Trigger: TACAGTAAAAACCCTCATCAAGTCCTTTGACAGTGC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGCACTGTCAAAGGACTaGATGAGGGTTTTTACTGTA +
Preference number: 5 (lower is better)
Translates to: WGSPELLEALQGCVANGVALSKD*MRVFTV
Trigger: TACAGTAAAAACCCTCATCAAGTCCTTTGACAGTGC...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCAAGGCGTTCCTCTTaGATCCTCCATATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRARRSS*ILHILW
Trigger: CCAGAGAATATGGAGGATCAAAGAGGAACGCCTTGC...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCAAAAAGTTTATCTGGTaGCCTCTGGGTAGGATACCT +
Preference number: 5 (lower is better)
Translates to: LWGSPELLEALQGCVANGKKFIW*PLGRIP
Trigger: AGGTATCCTACCCAGAGGCAACCAGATAAACTTTTT...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCGTAGAAGTGCTCCGCTaGGTTGAAGAAGCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPVEVLR*VEEAVP
Trigger: AGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTAC...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTTGTCTGACTTAGACTaGCTCATACGAACGTCACAT +
Preference number: 5 (lower is better)
Translates to: PELLEALQGCVANGVGVALSDLD*LIRTSH
Trigger: ATGTGACGTTCGTATGAGCAAGTCTAAGTCAGACAA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp GGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTAACAGTTTTTCAGAATaGTCTAACCTCTGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: GSPELLEALQGCVANGVGNSFSE*SNLCSR
Trigger: CCTAGAGCAGAGGTTAGACAATTCTGAAAAACTGTT...ACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCAACAGTTTTTCAGAATaGTCTAACCTCTGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: WGSPELLEALQGCVANGVNSFSE*SNLCSR
Trigger: CCTAGAGCAGAGGTTAGACAATTCTGAAAAACTGTT...GACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CTGTGGGGCAGCCCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGCCATTTTCAAAGTATaGCTTAAATGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: LWGSPELLEALQGCVANGAIFKV*LKCCWT
Trigger: TGTCCAGCAGCATTTAAGCAATACTTTGAAAATGGC...GCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGGGCTGCCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCCTGGCCACTGTGGCTTaGTATTCCTCTAACGTGGCT +
Preference number: 5 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPLATVA*YSSNVA
Trigger: AGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAG...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCGGCTGGGCTCCCTAAAGTaGTTTACTTTTCTCCTATTT +
Preference number: 5 (lower is better)
Translates to: ELLEALQGCVANGVGVARLGSLK*FTFLLF
Trigger: AAATAGGAGAAAAGTAAACAACTTTAGGGAGCCCAG...CCGAGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTCCTTTAAATAAGGCTTaGGTTCAAACAGCATGGACC +
Preference number: 5 (lower is better)
Translates to: PELLEALQGCVANGVGVAPLNKA*VQTAWT
Trigger: GGTCCATGCTGTTTGAACCAAAGCCTTATTTAAAGG...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTGGTCTTGTCTGGACATaGTTCAAACCAATAGCTACT +
Preference number: 5 (lower is better)
Translates to: PELLEALQGCVANGVGVAGLVWT*FKPIAT
Trigger: AGTAGCTATTGGTTTGAACAATGTCCAGACAAGACC...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCAGGCAAAGTGGCTTCTaGGAGACTTCGTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPRQSGF*ETSCQM
Trigger: CATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCT...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCTTGTCTGACTTAGACTaGCTCATACGAACGTCACAT +
Preference number: 5 (lower is better)
Translates to: RGKVASWRLRARCHRTESLSDLD*LIRTSH
Trigger: ATGTGACGTTCGTATGAGCAAGTCTAAGTCAGACAA...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CCAGAGTTGCTGGAAGCTTTACAGGGGTGCGTAGCTAATGGCGTCGGTGTCGCTTTTCACAGCACGATGTaGTTCTACTTCATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: PELLEALQGCVANGVGVAFHSTM*FYFIFK
Trigger: CTTGAAGATGAAGTAGAACAACATCGTGCTGTGAAA...AGCGACACCGACGCCATTAGCTACGCACCCCTGTAAAGCTTCCAGCAACTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS TCA 90 bp CTGAAGAAGTCAGAGTTCCTCCTCCATCGCTCTGGTTACCAGGGGTaGTTTCTGGGCTCAGGGACTGATAGCCAAACAGTTTTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: LKKSEFLLHRSGYQG*FLGSGTDSQTVFQN
Trigger: ATTCTGAAAAACTGTTTGGCTATCAGTCCCTGAGCCCAGAAATCACCCCTGGTAACCAGAGCGATGGAGGAGGAACTCTGACTTCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACACCAGGTTTTACAAGTTaGCCTCCCGTAGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: WLMPTAELAINRGTATKTPGFTS*PPVDAE
Trigger: TTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGG...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCAACAGTTTTTCAGAATaGTCTAACCTCTGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: RGKVASWRLRARCHRTESNSFSE*SNLCSR
Trigger: CCTAGAGCAGAGGTTAGACAATTCTGAAAAACTGTT...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCGCCATTTTCAAAGTATaGCTTAAATGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: RGKVASWRLRARCHRTESAIFKV*LKCCWT
Trigger: TGTCCAGCAGCATTTAAGCAATACTTTGAAAATGGC...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TGTCTGGACATTGTTCAAACCAATAGCTACTGCGTTAGGCACACGGGAGATCCCAGCAGGGTTTGGTACTaGAGATGCACTGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: CLDIVQTNSYCVRHTGDPSRVWY*RCTVKG
Trigger: TCCTTTGACAGTGCATCTCAAGTACCAAACCCTGCT...GGGATCTCCCGTGTGCCTAACGCAGTAGCTATTGGTTTGAACAATGTCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp AGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAGCCGACCTTTTCCAGCATaGCTCGTAACAAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: RGKVASWRLRARCHRTESRPFPA*LVTKQK
Trigger: TTTTTGTTTTGTTACGAGCAATGCTGGAAAAGGTCG...GCTCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp GATTTAATGTCATTTGCAATGACTACTGCAGTCTGGAGATCAGCCTaGAACTGCCGCCATTCCGCAGATTCTTCCCGAAGTCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: DLMSFAMTTAVWRSA*NCRHSADSSRSLLW
Trigger: CCACAGAAGACTTCGGGAAGAATCTGCGGAATGGCGGCAGTTTCAGGCTGATCTCCAGACTGCAGTAGTCATTGCAAATGACATTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTCGACTGCGGGAACGTTaGGCCAATGCCATGTCATTA +
Preference number: 5 (lower is better)
Translates to: QCNFGTNRTGATFSSIARRLRER*ANAMSL
Trigger: TAATGACATGGCATTGGCCAAACGTTCCCGCAGTCG...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp GAAGAGGCAAAGTGGCTTCTTGGAGACTTCGTGCCAGATGCCACAGGACTGAGAAAAATTTCTACGTCTTaGGTTTTTGCCAGCGTGAGA +
Preference number: 5 (lower is better)
Translates to: EEAKWLLGDFVPDATGLRKISTS*VFASVR
Trigger: TCTCACGCTGGCAAAAACCAAAGACGTAGAAATTTT...TCTCAGTCCTGTGGCATCTGGCACGAAGTCTCCAAGAAGCCACTTTGCCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp CTTCACTTTGGCCTCCAAAGCAGCTCTGTCACTGATCTGATTGTCTaGCTTAGACTTGCTCATACGAACGTCACATTCTGTAGCAGTTCG +
Preference number: 5 (lower is better)
Translates to: LHFGLQSSSVTDLIV*LRLAHTNVTFCSSS
Trigger: CGAACTGCTACAGAATGTGACGTTCGTATGAGCAAGTCTAAGTCAGACAATCAGATCAGTGACAGAGCTGCTTTGGAGGCCAAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000440893.1
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp TCTTCTCCAAGCCTTTCGTTTTCACTATTCAGTTCCTGGGTAATCTaGTGTAAATCAGCTAGCTCTTGCAGGGTTGCCTGGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SSPSLSFSLFSSWVI*CKSASSCRVAWSSS
Trigger: TGAGGAACTCCAGGCAACCCTGCAAGAGCTAGCTGATTTACAGCAGATTACCCAGGAACTGAATAGTGAAAACGAAAGGCTTGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp AATCTCCTCTTGGGCTTCAGATTTAATGTCATTTGCAATGACTACTaGAGTCTGGAGATCAGCCTGAAACTGCCGCCATTCCGCAGATTC +
Preference number: 5 (lower is better)
Translates to: NLLLGFRFNVICNDY*SLEISLKLPPFRRF
Trigger: GAATCTGCGGAATGGCGGCAGTTTCAGGCTGATCTCCAGACTGCAGTAGTCATTGCAAATGACATTAAATCTGAAGCCCAAGAGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACAGCAGAAGGTAGTTTTTaGCTCTGGTTTAATCGGGTA +
Preference number: 5 (lower is better)
Translates to: WLMPTAELAINRGTATKTAEGSF*LWFNRV
Trigger: TACCCGATTAAACCAGAGCAAAAAACTACCTTCTGC...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000437398.5
CDS-3UTR CAA 90 bp TGGCTCATGCCAACAGCAGAGCTGGCCATCAACAGAGGAACAGCAACAAAAACACCTTTAAATAAGGCTTaGGTTCAAACAGCATGGACC +
Preference number: 5 (lower is better)
Translates to: WLMPTAELAINRGTATKTPLNKA*VQTAWT
Trigger: GGTCCATGCTGTTTGAACCAAAGCCTTATTTAAAGG...TGTTTTTGTTGCTGTTCCTCTGTTGATGGCCAGCTCTGCTGTTGGCATGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp ACCTTAGCAATGGCATCCTGTAATCGATTGGCATCATTTCGGGTATaGGCCAGATCTTCCTGCAAGCTACTAGCCAAAGTCTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TLAMASCNRLASFRV*ARSSCKLLAKVSAF
Trigger: AAAAGCAGAGACTTTGGCTAGTAGCTTGCAGGAAGATCTGGCTCATACCCGAAATGATGCCAATCGATTACAGGATGCCATTGCTAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCCTCACTTGTACTGTGTaGGTTCTCTTCCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPLTCTV*VLFHLV
Trigger: CACCAGATGGAAGAGAACCAACACAGTACAAGTGAG...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCAGCAGGGTTTGGTACTaGAGATGCACTGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPSRVWY*RCTVKG
Trigger: TCCTTTGACAGTGCATCTCAAGTACCAAACCCTGCT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTTCAGGGGTTTGGATGTaGAGATTGGTCCACTTATGG +
Preference number: 5 (lower is better)
Translates to: QCNFGTNRTGATFSSIARSGVWM*RLVHLW
Trigger: CCATAAGTGGACCAATCTCAACATCCAAACCCCTGA...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCATGTCCAGTGTGGATTaGATGCCGACACTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPMSSVD*MPTLSA
Trigger: AGCTGAAAGTGTCGGCATCAAATCCACACTGGACAT...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp TGTTCCTGCAACTGCAATAAAGTGGACTCCACATCAGTCGGCTGGTaGGCCATAATAGTTTCCTTCTCAGATTTTTCATCACCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: CSCNCNKVDSTSVGW*AIIVSFSDFSSPSE
Trigger: TTCTGAGGGTGATGAAAAATCTGAGAAGGAAACTATTATGGCTCACCAGCCGACTGATGTGGAGTCCACTTTATTGCAGTTGCAGGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp GCTTCCTTATTGTCTTGTTCTGCCATTTTCAAAGTATTGCTTAAATaGTGCTGGACACCAAGAAGCTGCTCCCGTTCAAAACGGGCATTC +
Preference number: 5 (lower is better)
Translates to: ASLLSCSAIFKVLLK*CWTPRSCSRSKRAF
Trigger: GAATGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTTGAAAATGGCAGAACAAGACAATAAGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 90 bp TTATTGTCTTGTTCTGCCATTTTCAAAGTATTGCTTAAATGCTGCTaGACACCAAGAAGCTGCTCCCGTTCAAAACGGGCATTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LLSCSAIFKVLLKCC*TPRSCSRSKRAFSA
Trigger: CGCTGAGAATGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTTGAAAATGGCAGAACAAGACAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp TCCTTATTGTCTTGTTCTGCCATTTTCAAAGTATTGCTTAAATGCTaGTGGACACCAAGAAGCTGCTCCCGTTCAAAACGGGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: SLLSCSAIFKVLLKC*WTPRSCSRSKRAFS
Trigger: TGAGAATGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTTGAAAATGGCAGAACAAGACAATAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 90 bp CTCAGACTCAATAATTCGCTCCATATGGTGACTGCGTTCTTTGAGTaGCCCTATCATTTCTTGAGCTTCCTTATTGTCTTGTTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: LRLNNSLHMVTAFFE*PYHFLSFLIVLFCH
Trigger: ATGGCAGAACAAGACAATAAGGAAGCTCAAGAAATGATAGGGGCACTCAAAGAACGCAGTCACCATATGGAGCGAATTATTGAGTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS-3UTR CAA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCTTGTCTGACTTAGACTaGCTCATACGAACGTCACAT +
Preference number: 5 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPLSDLD*LIRTSH
Trigger: ATGTGACGTTCGTATGAGCAAGTCTAAGTCAGACAA...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp CAATGTAACTTTGGTACTAACAGAACAGGAGCGACCTTTTCCAGCATTGCTCGTTGCCCCTATCATTTCTaGAGCTTCCTTATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: QCNFGTNRTGATFSSIARCPYHF*SFLIVL
Trigger: CAAGACAATAAGGAAGCTCAAGAAATGATAGGGGCA...ACGAGCAATGCTGGAAAAGGTCGCTCCTGTTCTGTTAGTACCAAAGTTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS-3UTR CAA 90 bp TACGTAGACACGTTAAACTCCTATTCTAGAACATCGTGCTTGAATGCAGACCCCCGACCTTTTCCAGCATaGCTCGTAACAAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: YVDTLNSYSRTSCLNADPRPFPA*LVTKQK
Trigger: TTTTTGTTTTGTTACGAGCAATGCTGGAAAAGGTCG...GGGGTCTGCATTCAAGCACGATGTTCTAGAATAGGAGTTTAACGTGTCTACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000651059.1
CDS TCA 90 bp AAGTATTCAATCTGTCGACTAAAGTGTTCCAACTTATCGCTCTGCTaGCATAAAGACTCCATCAGAATAACCTTCTCTTCTCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: KYSICRLKCSNLSLC*HKDSIRITFSSPSL
Trigger: AAGGCTTGGAGAAGAGAAGGTTATTCTGATGGAGTCTTTATGTCAGCAGAGCGATAAGTTGGAACACTTTAGTCGACAGATTGAATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS TCA 90 bp GTTGCTCTAATTCCATATAGCGCCCACTTTTTACATCTTCATCTATaGCATAAGAAATGTGATGCTCATCTAGAAGAGAGCGGAAGTATT +
Preference number: 5 (lower is better)
Translates to: VALIPYSAHFLHLHL*HKKCDAHLEESGSI
Trigger: AATACTTCCGCTCTCTTCTAGATGAGCATCACATTTCTTATGTCATAGATGAAGATGTAAAAAGTGGGCGCTATATGGAATTAGAGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 90 bp TTTGGGCTGGGCGGTGAGCTCACCCGGTGGCTCAGCCGAGACCCGTaGAGTCCGGCCTCAGGAAAGCAGCCTACCCCGCAGCGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: FGLGGELTRWLSRDP*SPASGKQPTPQRRL
Trigger: CAAGCGGCGCTGCGGGGTAGGCTGCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000651059.1
CDS TCA 72 bp GCGGTGAGCTCACCCGGTGGCTCAGCCGAGACCCGTTaGGTCCGGCCTCAGGAAAGCAGCCTACCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: AVSSPGGSAETR*VRPQESSLPRS
Trigger: GCTGCGGGGTAGGCTGCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000651059.1
CDS CAA 72 bp GGCGGTGAGCTCACCCGGTGGCTCAGCCGAGACCCGTaGAGTCCGGCCTCAGGAAAGCAGCCTACCCCGCAG +
Preference number: 6 (lower is better)
Translates to: GGELTRWLSRDP*SPASGKQPTPQ
Trigger: CTGCGGGGTAGGCTGCTTTCCTGAGGCCGGACTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000651059.1
CDS CAA 72 bp GCGCTGCACCGCATCGCTCCCTCGCAATCTCCTGGTTaGGGCTGGGCGGTGAGCTCACCCGGTGGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: ALHRIAPSQSPG*GWAVSSPGGSA
Trigger: GGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp CACCGCATCGCTCCCTCGCAATCTCCTGGTTTGGGCTaGGCGGTGAGCTCACCCGGTGGCTCAGCCGAGACC +
Preference number: 6 (lower is better)
Translates to: HRIAPSQSPGLG*AVSSPGGSAET
Trigger: GGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp ACACGCGCTGCACCGCATCGCTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAGCTCACCCGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: TRAAPHRSLAIS*FGLGGELTRWL
Trigger: GAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCAGCGCGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS CAA 90 bp CAAGAACACGCGCTGCACCGCATCGCTCCCTCGCAATCTCCTGGTTaGGGCTGGGCGGTGAGCTCACCCGGTGGCTCAGCCGAGACCCGT +
Preference number: 6 (lower is better)
Translates to: QEHALHRIAPSQSPG*GWAVSSPGGSAETR
Trigger: ACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCAGCGCGTGTTCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS TCA 72 bp TCGCTCCCTCGCAATCTCCTGGTTTGGGCTGGGCGGTaGGCTCACCCGGTGGCTCAGCCGAGACCCGTTGAG +
Preference number: 6 (lower is better)
Translates to: SLPRNLLVWAGR*AHPVAQPRPVE
Trigger: CTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp ATCTCCTGGTTTGGGCTGGGCGGTGAGCTCACCCGGTaGCTCAGCCGAGACCCGTTGAGTCCGGCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: ISWFGLGGELTR*LSRDPLSPASG
Trigger: TCCTGAGGCCGGACTCAACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp TGTCGCTCGGTCGCTGTGGAGGGGTACCCCCGCTATTaGGGCGGCTCCTCCCGGCATGCTCAGGTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: CRSVAVEGYPRY*GGSSRHAQVSK
Trigger: CTTTGAGACCTGAGCATGCCGGGAGGAGCCGCCCCAATAGCGGGGGTACCCCTCCACAGCGACCGAGCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000472799.1
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp AATCGCGCTGCACCGCATCGCTCCCTCGCAATCTCCTaGTTTGGGCTGGGCGGTGAGCTCACCCGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: NRAAPHRSLAIS*FGLGGELTRWL
Trigger: GAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCAGCGCGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
CDS CAA 90 bp AAGCAAATCGCGCTGCACCGCATCGCTCCCTCGCAATCTCCTGGTTaGGGCTGGGCGGTGAGCTCACCCGGTGGCTCAGCCGAGACCCGT +
Preference number: 6 (lower is better)
Translates to: KQIALHRIAPSQSPG*GWAVSSPGGSAETR
Trigger: ACGGGTCTCGGCTGAGCCACCGGGTGAGCTCACCGCCCAGCCCAAACCAGGAGATTGCGAGGGAGCGATGCGGTGCAGCGCGATTTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
CDS GCA 72 bp CGCTGCTCCCCTTCCGGGAGCGCTCTATGCTGGGGATaGCTTCCGACTCTGAGGAGGATGGTGCATCCAGCG +
Preference number: 6 (lower is better)
Translates to: RCSPSGSALCWG*LPTLRRMVHPA
Trigger: CGCTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp TGGCATTCCCGCTGCTCCCCTTCCGGGAGCGCTCTATaGTGGGGATGCCTTCCGACTCTGAGGAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: WHSRCSPSGSAL*WGCLPTLRRMV
Trigger: CACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp TCAGGCAAGCCACGGACACTTCACTGGCATTCCCGCTaGTCCCCTTCCGGGAGCGCTCTATGCTGGGGATGC +
Preference number: 6 (lower is better)
Translates to: SGKPRTLHWHSR*SPSGSALCWGC
Trigger: GCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTGAAGTGTCCGTGGCTTGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS TCA 72 bp CCGGGAGCGCTCTATGCTGGGGATGCCTTCCGACTCTaGGGAGGATGGTGCATCCAGCGCATCATCGCTCGA +
Preference number: 6 (lower is better)
Translates to: PGALYAGDAFRL*GGWCIQRIIAR
Trigger: TCGAGCGATGATGCGCTGGATGCACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp CATTCCCGCTGCTCCCCTTCCGGGAGCGCTCTATGCTaGGGATGCCTTCCGACTCTGAGGAGGATGGTGCAT +
Preference number: 6 (lower is better)
Translates to: HSRCSPSGSALC*GCLPTLRRMVH
Trigger: ATGCACCATCCTCCTCAGAGTCGGAAGGCATCCCCAGCATAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp GTATCCGTTCAGTCAGGCAAGCCACGGACACTTCACTaGCATTCCCGCTGCTCCCCTTCCGGGAGCGCTCTA +
Preference number: 6 (lower is better)
Translates to: VSVQSGKPRTLH*HSRCSPSGSAL
Trigger: TAGAGCGCTCCCGGAAGGGGAGCAGCGGGAATGCCAGTGAAGTGTCCGTGGCTTGCCTGACTGAACGGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp CAACAAACCTATGCTGGGAGCCTGAGCTTCTGCATCTaGACCAAGTACCCTGCACTAGGCCCGGCCACCCTC +
Preference number: 6 (lower is better)
Translates to: QQTYAGSLSFCI*TKYPALGPATL
Trigger: GAGGGTGGCCGGGCCTAGTGCAGGGTACTTGGTGCAGATGCAGAAGCTCAGGCTCCCAGCATAGGTTTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS GCA 72 bp GTGCCACAACAAACCTATGCTGGGAGCCTGAGCTTCTaGATCTGCACCAAGTACCCTGCACTAGGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: VPQQTYAGSLSF*ICTKYPALGPA
Trigger: GGCCGGGCCTAGTGCAGGGTACTTGGTGCAGATGCAGAAGCTCAGGCTCCCAGCATAGGTTTGTTGTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS CAA 72 bp CTGAGAGGGTCTTGGCACTTTCCATCGCAGGCACTCTaGGCAGGGAAGCAGGCCGGCTGGCTGAAGATGTTC +
Preference number: 6 (lower is better)
Translates to: LRGSWHFPSQAL*AGKQAGWLKMF
Trigger: GAACATCTTCAGCCAGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGGAAAGTGCCAAGACCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp CTGTGGAGACGTGGTTCCCATAGCCATCAGAGAGGCTaGCGACGCTCCCTCCTGTGCAGAAATGTCCCGTTT +
Preference number: 6 (lower is better)
Translates to: LWRRGSHSHQRG*RRSLLCRNVPF
Trigger: AAACGGGACATTTCTGCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCTATGGGAACCACGTCTCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS TCA 72 bp AGGAGGATGGTGCATCCAGCGCATCATCGCTCGATGTaGGGGGCTGGTAGACCTCACTGCACTCACTGTCTA +
Preference number: 6 (lower is better)
Translates to: RRMVHPAHHRSM*GAGRPHCTHCL
Trigger: TAGACAGTGAGTGCAGTGAGGTCTACCAGCCCCTCACATCGAGCGATGATGCGCTGGATGCACCATCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp CACAGATGCCGTTGGAGAAGAGGACAGGGAAAGCTGTaGAGACGTGGTTCCCATAGCCATCAGAGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: HRCRWRRGQGKL*RRGSHSHQRGW
Trigger: CCAGCCTCTCTGATGGCTATGGGAACCACGTCTCCACAGCTTTCCCTGTCCTCTTCTCCAACGGCATCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 72 bp TTATTCGGCTTCGGGTGGTGGGAGTCACAGATGCCGTaGGAGAAGAGGACAGGGAAAGCTGTGGAGACGTGG +
Preference number: 6 (lower is better)
Translates to: LFGFGWWESQMP*EKRTGKAVETW
Trigger: CCACGTCTCCACAGCTTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACCACCCGAAGCCGAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 90 bp GTCGAGACACTGAGAGGGTCTTGGCACTTTCCATCGCAGGCACTCTaGGCAGGGAAGCAGGCCGGCTGGCTGAAGATGTTCTTAACAGAT +
Preference number: 6 (lower is better)
Translates to: VETLRGSWHFPSQAL*AGKQAGWLKMFLTD
Trigger: ATCTGTTAAGAACATCTTCAGCCAGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGGAAAGTGCCAAGACCCTCTCAGTGTCTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp ACCCGTTCTTTCCTCACTCCTGAAGAATCCTACTTCTaGCGCACCAATGCTGTGGCACCTGAACACGCACCC +
Preference number: 6 (lower is better)
Translates to: TRSFLTPEESYF*RTNAVAPEHAP
Trigger: GGGTGCGTGTTCAGGTGCCACAGCATTGGTGCGGCAGAAGTAGGATTCTTCAGGAGTGAGGAAAGAACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS CCA 72 bp CCATCGCAGGCACTCTTGGCAGGGAAGCAGGCCGGCTaGCTGAAGATGTTCTTAACAGATGCTCTTGAACAG +
Preference number: 6 (lower is better)
Translates to: PSQALLAGKQAG*LKMFLTDALEQ
Trigger: CTGTTCAAGAGCATCTGTTAAGAACATCTTCAGCCAGCCGGCCTGCTTCCCTGCCAAGAGTGCCTGCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp CACTCACCTCTACCTGGTGCCACAACAAACCTATGCTaGGAGCCTGAGCTTCTGCATCTGCACCAAGTACCC +
Preference number: 6 (lower is better)
Translates to: HSPLPGATTNLC*EPELLHLHQVP
Trigger: GGGTACTTGGTGCAGATGCAGAAGCTCAGGCTCCCAGCATAGGTTTGTTGTGGCACCAGGTAGAGGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS GCA 72 bp CATAGCCATCAGAGAGGCTGGCGACGCTCCCTCCTGTaGAGAAATGTCCCGTTTCACTTCTTCACTACTTCG +
Preference number: 6 (lower is better)
Translates to: HSHQRGWRRSLL*RNVPFHFFTTS
Trigger: CGAAGTAGTGAAGAAGTGAAACGGGACATTTCTGCACAGGAGGGAGCGTCGCCAGCCTCTCTGATGGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp TTCTCTTATTCGGCTTCGGGTGGTGGGAGTCACAGATaGCGTTGGAGAAGAGGACAGGGAAAGCTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: FSYSASGGGSHR*RWRRGQGKLWR
Trigger: TCTCCACAGCTTTCCCTGTCCTCTTCTCCAACGGCATCTGTGACTCCCACCACCCGAAGCCGAATAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp CGACACTCACCTCTACCTGGTGCCACAACAAACCTATaGTGGGAGCCTGAGCTTCTGCATCTGCACCAAGTA +
Preference number: 6 (lower is better)
Translates to: RHSPLPGATTNL*WEPELLHLHQV
Trigger: TACTTGGTGCAGATGCAGAAGCTCAGGCTCCCAGCATAGGTTTGTTGTGGCACCAGGTAGAGGTGAGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472799.1
CDS CCA 72 bp GGTCACTGGCCACTGTGGCTTTGTATTCCTCTAACGTaGCTGCCAAGGCTGCTTTTCCTTTCTGCTCAGACT +
Preference number: 6 (lower is better)
Translates to: GHWPLWLCIPLT*LPRLLFLSAQT
Trigger: AGTCTGAGCAGAAAGGAAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp TCAGGCGATTCATCTCTATCTGGTCACTGGCCACTGTaGCTTTGTATTCCTCTAACGTGGCTGCCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: SGDSSLSGHWPL*LCIPLTWLPRL
Trigger: CAGCCTTGGCAGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACCAGATAGAGATGAATCGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp GCTGAGCCTTCAGGCGATTCATCTCTATCTGGTCACTaGCCACTGTGGCTTTGTATTCCTCTAACGTGGCTG +
Preference number: 6 (lower is better)
Translates to: AEPSGDSSLSGH*PLWLCIPLTWL
Trigger: CAGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACCAGATAGAGATGAATCGCCTGAAGGCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 90 bp GCCTTCAGGCGATTCATCTCTATCTGGTCACTGGCCACTGTGGCTTaGTATTCCTCTAACGTGGCTGCCAAGGCTGCTTTTCCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: AFRRFISIWSLATVA*YSSNVAAKAAFPFC
Trigger: GCAGAAAGGAAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACCAGATAGAGATGAATCGCCTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp TTCTGTAGCAGTTCGACTGCGGGAACGTTTGGCCAATaGCATGTCATTAGCTCCCTGACCTGTAGAAGTGCT +
Preference number: 6 (lower is better)
Translates to: FCSSSTAGTFGQ*HVISSLTCRSA
Trigger: AGCACTTCTACAGGTCAGGGAGCTAATGACATGGCATTGGCCAAACGTTCCCGCAGTCGAACTGCTACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS CCA 72 bp TCCTCCTCCATCGCTCTGGTTACCAGGGGTGATTTCTaGGCTCAGGGACTGATAGCCAAACAGTTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: SSSIALVTRGDF*AQGLIAKQFFR
Trigger: TCTGAAAAACTGTTTGGCTATCAGTCCCTGAGCCCAGAAATCACCCCTGGTAACCAGAGCGATGGAGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp AAAGTATTGCTTAAATGCTGCTGGACACCAAGAAGCTaGTCCCGTTCAAAACGGGCATTCTCAGCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: KVLLKCCWTPRS*SRSKRAFSARS
Trigger: GGACCTCGCTGAGAATGCCCGTTTTGAACGGGAGCAGCTTCTTGGTGTCCAGCAGCATTTAAGCAATACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp AGTTCCTCACTTGTACTGTGTTGGTTCTCTTCCATCTaGTGTATCCGTTCAGTCAGGCAAGCCACGGACACT +
Preference number: 6 (lower is better)
Translates to: SSSLVLCWFSSI*CIRSVRQATDT
Trigger: AGTGTCCGTGGCTTGCCTGACTGAACGGATACACCAGATGGAAGAGAACCAACACAGTACAAGTGAGGAACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 72 bp CGATTCATCTCTATCTGGTCACTGGCCACTGTGGCTTaGTATTCCTCTAACGTGGCTGCCAAGGCTGCTTTT +
Preference number: 6 (lower is better)
Translates to: RFISIWSLATVA*YSSNVAAKAAF
Trigger: AAAAGCAGCCTTGGCAGCCACGTTAGAGGAATACAAAGCCACAGTGGCCAGTGACCAGATAGAGATGAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp TGGTTGAGTTCTTCACGGATGGCAGTATTCTGTTCCTaGAACTGCAATAAAGTGGACTCCACATCAGTCGGC +
Preference number: 6 (lower is better)
Translates to: WLSSSRMAVFCS*NCNKVDSTSVG
Trigger: GCCGACTGATGTGGAGTCCACTTTATTGCAGTTGCAGGAACAGAATACTGCCATCCGTGAAGAACTCAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 72 bp CTCGGTATTCATCCTCTACCTGTAGAAGTGCTCCGCTaGGTTGAAGAAGCTGTGCCTGTGCTAATCTTGGAT +
Preference number: 6 (lower is better)
Translates to: LGIHPLPVEVLR*VEEAVPVLILD
Trigger: ATCCAAGATTAGCACAGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTACAGGTAGAGGATGAATACCGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416735.5
CDS TCA 72 bp GGCCTCCAAAGCAGCTCTGTCACTGATCTGATTGTCTaGCTTAGACTTGCTCATACGAACGTCACATTCTGT +
Preference number: 6 (lower is better)
Translates to: GLQSSSVTDLIV*LRLAHTNVTFC
Trigger: ACAGAATGTGACGTTCGTATGAGCAAGTCTAAGTCAGACAATCAGATCAGTGACAGAGCTGCTTTGGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000440893.1
ENST00000541492.1
ENST00000651059.1
CDS TCA 72 bp ATTAGCTCCCTGACCTGTAGAAGTGCTCCGCTTGGTTaGAGAAGCTGTGCCTGTGCTAATCTTGGATTTGTT +
Preference number: 6 (lower is better)
Translates to: ISSLTCRSAPLG*RSCACANLGFV
Trigger: AACAAATCCAAGATTAGCACAGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTACAGGTCAGGGAGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS GCA 72 bp AGCCTTTCGTTTTCACTATTCAGTTCCTGGGTAATCTaGTGTAAATCAGCTAGCTCTTGCAGGGTTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SLSFSLFSSWVI*CKSASSCRVAW
Trigger: CCAGGCAACCCTGCAAGAGCTAGCTGATTTACAGCAGATTACCCAGGAACTGAATAGTGAAAACGAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 72 bp TTAACAGATGCTCTTGAACAGGGATTTCCCCATAGTTaGGTCTCTTATCTGACAGGGCTGTCAGGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: LTDALEQGFPHS*VSYLTGLSGVW
Trigger: CCAAACCCCTGACAGCCCTGTCAGATAAGAGACCAAACTATGGGGAAATCCCTGTTCAAGAGCATCTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS GCA 72 bp GAGCCAACACTCCTGCTTGCTTTCTTCATTCTGGGCTaGCTCTTCGTGATGCATTTACAAGCAAATTGTGAT +
Preference number: 6 (lower is better)
Translates to: EPTLLLAFFILG*LFVMHLQANCD
Trigger: ATCACAATTTGCTTGTAAATGCATCACGAAGAGGCAGCCCAGAATGAAGAAAGCAAGCAGGAGTGTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314328.14
ENST00000651059.1
CDS GCA 72 bp TTGGGCTTCAGATTTAATGTCATTTGCAATGACTACTaGAGTCTGGAGATCAGCCTGAAACTGCCGCCATTC +
Preference number: 6 (lower is better)
Translates to: LGFRFNVICNDY*SLEISLKLPPF
Trigger: GAATGGCGGCAGTTTCAGGCTGATCTCCAGACTGCAGTAGTCATTGCAAATGACATTAAATCTGAAGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CCA 72 bp AGTTTGGTCTCTTATCTGACAGGGCTGTCAGGGGTTTaGATGTTGAGATTGGTCCACTTATGGAATGTCTCT +
Preference number: 6 (lower is better)
Translates to: SLVSYLTGLSGV*MLRLVHLWNVS
Trigger: AGAGACATTCCATAAGTGGACCAATCTCAACATCCAAACCCCTGACAGCCCTGTCAGATAAGAGACCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 90 bp AAGATGTTCTTAACAGATGCTCTTGAACAGGGATTTCCCCATAGTTaGGTCTCTTATCTGACAGGGCTGTCAGGGGTTTGGATGTTGAGA +
Preference number: 6 (lower is better)
Translates to: KMFLTDALEQGFPHS*VSYLTGLSGVWMLR
Trigger: TCTCAACATCCAAACCCCTGACAGCCCTGTCAGATAAGAGACCAAACTATGGGGAAATCCCTGTTCAAGAGCATCTGTTAAGAACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314328.14
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS TCA 72 bp ATAGTTTCCTTCTCAGATTTTTCATCACCCTCAGAATaGTCCTCATTAATGCCCAGCTGGGCACGCATGTCT +
Preference number: 6 (lower is better)
Translates to: IVSFSDFSSPSE*SSLMPSWARMS
Trigger: AGACATGCGTGCCCAGCTGGGCATTAATGAGGATCATTCTGAGGGTGATGAAAAATCTGAGAAGGAAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000440893.1
ENST00000541492.1
ENST00000651059.1
CDS TCA 72 bp TATTCATCCTCTACCTGTAGAAGTGCTCCGCTTGGTTaGAGAAGCTGTGCCTGTGCTAATCTTGGATTTGTT +
Preference number: 6 (lower is better)
Translates to: YSSSTCRSAPLG*RSCACANLGFV
Trigger: AACAAATCCAAGATTAGCACAGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTACAGGTAGAGGATGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416735.5
CDS CCA 72 bp TCTTCTCCAAGCCTTTCGTTTTCACTATTCAGTTCCTaGGTAATCTGCTGTAAATCAGCTAGCTCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: SSPSLSFSLFSS*VICCKSASSCR
Trigger: CCTGCAAGAGCTAGCTGATTTACAGCAGATTACCCAGGAACTGAATAGTGAAAACGAAAGGCTTGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 72 bp GAACTGGATTCTTTATTACCTGTAGAAGTGCTCCGCTaGGTTGAAGAAGCTGTGCCTGTGCTAATCTTGGAT +
Preference number: 6 (lower is better)
Translates to: ELDSLLPVEVLR*VEEAVPVLILD
Trigger: ATCCAAGATTAGCACAGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTACAGGTAATAAAGAATCCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000440893.1
ENST00000541492.1
CDS TCA 72 bp GGATTCTTTATTACCTGTAGAAGTGCTCCGCTTGGTTaGAGAAGCTGTGCCTGTGCTAATCTTGGATTTGTT +
Preference number: 6 (lower is better)
Translates to: GFFITCRSAPLG*RSCACANLGFV
Trigger: AACAAATCCAAGATTAGCACAGGCACAGCTTCTTCAACCAAGCGGAGCACTTCTACAGGTAATAAAGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000440893.1
ENST00000541492.1
CDS CCA 72 bp GGTAGACCTCACTGCACTCACTGTCTAAATTGTCCATaGAGTTACTGTGCTGATGGTCCATTAGTGTATTTT +
Preference number: 6 (lower is better)
Translates to: GRPHCTHCLNCP*SYCADGPLVYF
Trigger: AAAATACACTAATGGACCATCAGCACAGTAACTCCATGGACAATTTAGACAGTGAGTGCAGTGAGGTCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 72 bp TCATCACTGCTCTTGGTTGTGAGCAGCAGTAGTGTTTaGTATTTACAAAAGCTCCAACCAGCAGTGAAGTGT +
Preference number: 6 (lower is better)
Translates to: SSLLLVVSSSSV*YLQKLQPAVKC
Trigger: ACACTTCACTGCTGGTTGGAGCTTTTGTAAATACAAAACACTACTGCTGCTCACAACCAAGAGCAGTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440893.1
CDS CAA 90 bp TCGCTCCATATGGTGACTGCGTTCTTTGAGTGCCCCTATCATTTCTaGAGCTTCCTTATTGTCTTGTTCTGCCATTTTCAAAGTATTGCT +
Preference number: 6 (lower is better)
Translates to: SLHMVTAFFECPYHF*SFLIVLFCHFQSIA
Trigger: AGCAATACTTTGAAAATGGCAGAACAAGACAATAAGGAAGCTCAAGAAATGATAGGGGCACTCAAAGAACGCAGTCACCATATGGAGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 90 bp GTGAGACCCTTTGACAATGATGCTGCTGTTCCAGGTTTTACAAGTTaGCCTCCCGTAGATGCTGAAGAGCTGTTTTCAGGTTTAATTTTT +
Preference number: 6 (lower is better)
Translates to: VRPFDNDAAVPGFTS*PPVDAEELFSGLIF
Trigger: AAAAATTAAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGGAACAGCAGCATCATTGTCAAAGGGTCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651059.1
CDS TCA 72 bp AACTGCAATAAAGTGGACTCCACATCAGTCGGCTGGTaGGCCATAATAGTTTCCTTCTCAGATTTTTCATCA +
Preference number: 6 (lower is better)
Translates to: NCNKVDSTSVGW*AIIVSFSDFSS
Trigger: TGATGAAAAATCTGAGAAGGAAACTATTATGGCTCACCAGCCGACTGATGTGGAGTCCACTTTATTGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 72 bp ATGGTGACTGCGTTCTTTGAGTGCCCCTATCATTTCTaGAGCTTCCTTATTGTCTTGTTCTGCCATTTTCAA +
Preference number: 6 (lower is better)
Translates to: MVTAFFECPYHF*SFLIVLFCHFQ
Trigger: TTGAAAATGGCAGAACAAGACAATAAGGAAGCTCAAGAAATGATAGGGGCACTCAAAGAACGCAGTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS CAA 90 bp CTCTTGGTCTTTGACAATGATGCTGCTGTTCCAGGTTTTACAAGTTaGCCTCCCGTAGATGCTGAAGAGCTGTTTTCAGGTTTAATTTTT +
Preference number: 6 (lower is better)
Translates to: LLVFDNDAAVPGFTS*PPVDAEELFSGLIF
Trigger: AAAAATTAAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGGAACAGCAGCATCATTGTCAAAGACCAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000416735.5
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
CDS TCA 72 bp ATCTGTCGACTAAAGTGTTCCAACTTATCGCTCTGCTaGCATAAAGACTCCATCAGAATAACCTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: ICRLKCSNLSLC*HKDSIRITFSS
Trigger: AGAAGAGAAGGTTATTCTGATGGAGTCTTTATGTCAGCAGAGCGATAAGTTGGAACACTTTAGTCGACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1
CDS TCA 72 bp ACTGTATTCTCTAGATCAGAAATAATGAGGTTGTCATaGAGTTTCACAGCACGATGTTGTTCTACTTCATCT +
Preference number: 6 (lower is better)
Translates to: TVFSRSEIMRLS*SFTARCCSTSS
Trigger: AGATGAAGTAGAACAACATCGTGCTGTGAAACTTCATGACAACCTCATTATTTCTGATCTAGAGAATACAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314328.14
ENST00000421374.5
ENST00000437398.5
ENST00000541492.1
ENST00000651059.1