RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPDEF (Homo sapiens)

Ensembl gene IDs: ENSG00000124664

Ensembl transcript IDs: ENST00000374037.8, ENST00000544425.2

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCAGAGAGAGGCCTGGACTGCCTGTGGCCTTTGTCGAGTCACTaGCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: GAERGLDCLWPLSSH*PSVGSALEMLGSEA
Trigger: TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAGGCAGTCCAGGCCTCTCTCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTaGAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGA +
Preference number: 1 (lower is better)
Translates to: LLSIPGGTPGCPTQG*RCLPAPCQVWCRMG
Trigger: TCCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGAGGAAGCACCCCTaGCCCAGGGTCCCGAAGGCC +
Preference number: 2 (lower is better)
Translates to: GALLAAQLRGADVSLHHARRKHP*PRVPKA
Trigger: GGCCTTCGGGACCCTGGGGCAGGGGTGCTTCCTCCT...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCCATCTCAGGGCCTaGCTGAGGCAGGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMPHLRA*LRQGRQ
Trigger: CTGCCTGCCCTGCCTCAGCCAGGCCCTGAGATGGGG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR TCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGGGAGCAGCTGGGCCTaGGGAGGAAGCACCCCTGCC +
Preference number: 2 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQGSSWA*GGSTPA
Trigger: GGCAGGGGTGCTTCCTCCTCAGGCCCAGCTGCTCCC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR TCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCACAGGAGAGAGGCCCCTaGGGGCGGGTTTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAAQERGP*GRVSGP
Trigger: AGGGCCTGAAACCCGCCCTCAGGGGCCTCTCTCCTG...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR TCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGTTGGTTGCCCCTCCCTaGCCTTGGGCTCTGGAAGGT +
Preference number: 2 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQLVAPP*PWALEG
Trigger: ACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAA...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCTTCTGTAGGCTCTaGTCTGGAAATGCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMPFCRL*SGNAGV
Trigger: GACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR TCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCACAGGAGAGAGGCCCCTaGGGGCGGGTTTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSQERGP*GRVSGP
Trigger: AGGGCCTGAAACCCGCCCTCAGGGGCCTCTCTCCTG...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR GCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAAGGAGGAAGCACCCCTaGCCCAGGGTCCCGAAGGCC +
Preference number: 2 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSRRKHP*PRVPKA
Trigger: GGCCTTCGGGACCCTGGGGCAGGGGTGCTTCCTCCT...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCCTTTGTCGAGTCACTaGCCTTCTGTAGGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GALLAAQLRGADVSLHHAPLSSH*PSVGSA
Trigger: AGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCACCCCATCTCAGGGCCTaGCTGAGGCAGGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSPHLRA*LRQGRQ
Trigger: CTGCCTGCCCTGCCTCAGCCAGGCCCTGAGATGGGG...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGGGCCTGGACTGCCTGTaGCCTTTGTCGAGTCACTGC +
Preference number: 2 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGGLDCL*PLSSHC
Trigger: GCAGTGACTCGACAAAGGCCACAGGCAGTCCAGGCC...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR GCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGGAGAGAGGCCTGGACTaGCTGTGGCCTTTGTCGAGT +
Preference number: 2 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGERGLD*LWPLSS
Trigger: ACTCGACAAAGGCCACAGGCAGTCCAGGCCTCTCTC...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTAGGTGTGGTGCAGAATaGGAGGCAGGGGGATGGAGC +
Preference number: 2 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCRCGAE*EAGGWS
Trigger: GCTCCATCCCCCTGCCTCCCATTCTGCACCACACCT...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR TCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGTTGGTTGCCCCTCCCTaGCCTTGGGCTCTGGAAGGT +
Preference number: 2 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLLVAPP*PWALEG
Trigger: ACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAA...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR GCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGCCTGGGGCAGTTGGTTaGCCCTCCCTGACCTTGGGC +
Preference number: 2 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQPGAVG*PSLTLG
Trigger: GCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGG...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGACCCATATCCCCCTaGGGCAGTTGGTTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQGPISP*GSWLPL
Trigger: GAGGGGCAACCAACTGCCCCAGGGGGATATGGGTCC...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTGCTCTGGAAATGCTaGGGTCAGAGGCAGGTGTTG +
Preference number: 2 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCLLWKC*GQRQVL
Trigger: CAACACCTGCCTCTGACCCCAGCATTTCCAGAGCAG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR GCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGCCCTTCTGTAGGCTCTaGTCTGGAAATGCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQPFCRL*SGNAGV
Trigger: GACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGG...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR GCA 72 bp ATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTaGAGATGTCTCCCTGCACCATGCCAGGTGTGGTGC +
Preference number: 3 (lower is better)
Translates to: IPGGTPGCPTQG*RCLPAPCQVWC
Trigger: GCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR GCA 72 bp TCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTaGACCATGCCAGGTGTGGTGCAGAATGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SWLPNSGVQMSP*TMPGVVQNGRQ
Trigger: CTGCCTCCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CAA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGTGCCCCTCCCTGACCTaGGGCTCTGGAAGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGCPSLT*GSGRSE
Trigger: CTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCA...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CAA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGCCCTGGGGCAGTTGGTaGCCCCTCCCTGACCTTGGG +
Preference number: 3 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLPWGSW*PLPDLG
Trigger: CCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR CCA 72 bp CAGGGGGATGGAGCAGAGAGAGGCCTGGACTGCCTGTaGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCT +
Preference number: 3 (lower is better)
Translates to: QGDGAERGLDCL*PLSSHCPSVGS
Trigger: AGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAGGCAGTCCAGGCCTCTCTCTGCTCCATCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR GCA 72 bp AGAGGCCTGGACTGCCTGTGGCCTTTGTCGAGTCACTaGCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGG +
Preference number: 3 (lower is better)
Translates to: RGLDCLWPLSSH*PSVGSALEMLG
Trigger: CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAGGCAGTCCAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR-3UTR CAA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGCCCTGGGGCAGTTGGTaGCCCCTCCCTGACCTTGGG +
Preference number: 3 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQPWGSW*PLPDLG
Trigger: CCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR GCA 72 bp GTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTaGTCTGGAAATGCTGGGGTCAGAGGCAGGTGTTGG +
Preference number: 3 (lower is better)
Translates to: VAFVESLPFCRL*SGNAGVRGRCW
Trigger: CCAACACCTGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR GCA 72 bp GTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTaGCCAACTCAGGGGTGCAGATGTCTCCCTGCACCA +
Preference number: 3 (lower is better)
Translates to: VSLLSIPGGTPG*PTQGCRCLPAP
Trigger: TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
3UTR CCA 72 bp TCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTaGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: SSIFIIHSRGHS*LPNSGVQMSPC
Trigger: GCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGGCCCTGCTCGGGCGTaGCGGGTGGACTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMGPARA*RVDWDS
Trigger: GGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCC...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGGGAGCAGCTGGGCCTaGGGAGGAAGCACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMGSSWA*GGSTPA
Trigger: GGCAGGGGTGCTTCCTCCTCAGGCCCAGCTGCTCCC...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCAGCCCAGGGCTGCCTaGTGGCACCGTGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMQPRAA*WHRGKA
Trigger: GGCCTTGCCACGGTGCCAGCAGGCAGCCCTGGGCTG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGGCTGGGGGATACGCTaGTCAGACCCGGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMGWGIR*SDPGWR
Trigger: GCGCCAGCCCGGGTCTGAGCAGCGTATCCCCCAGCC...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAAGGAGGAAGCACCCCTaGCCCAGGGTCCCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPRRKHP*PRVPKA
Trigger: GGCCTTCGGGACCCTGGGGCAGGGGTGCTTCCTCCT...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCAGGAGAGAGGCCCCTaGGGGCGGGTTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHAQERGP*GRVSGP
Trigger: AGGGCCTGAAACCCGCCCTCAGGGGCCTCTCTCCTG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCGCTGCCCATGCCGCTaGTGTTTGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHARCPCR*CLGWRL
Trigger: CAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGGGCTGGCGCTGCCCATaGCGCTGCTGTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQGWRCP*RCCLGW
Trigger: CCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCC...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGGACCCGGGCTGGCGCTaGCCATGCCGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQDPGWR*PCRCCL
Trigger: CAAACAGCAGCGGCATGGGCAGCGCCAGCCCGGGTC...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGTGGCTCCTCCCGACTaGTGGCCCCAGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAVAPPD*WPQGPW
Trigger: CCAAGGCCCCTGGGGCCAGCAGTCGGGAGGAGCCAC...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGCGCACAGCTCCTTaGCCGCCAGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPWRTAP*PPAPGR
Trigger: CCTTCCAGGAGCTGGCGGGCAAGGAGCTGTGCGCCA...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCACCTGGGGCAGTTGGTTaGCCCTCCCTGACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPPGAVG*PSLTLG
Trigger: GCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGG...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAGGGGGCACTCCTGGCTaGCCAACTCAGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPGGTPG*PTQGCR
Trigger: TCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCC...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCAGGGCTGCCTGCTaGCACCGTGGCAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMPRAAC*HRGKAQ
Trigger: TTGGGCCTTGCCACGGTGCCAGCAGGCAGCCCTGGG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCCCAGGGCTGCCTGCTaGCACCGTGGCAAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHAPRAAC*HRGKAQ
Trigger: TTGGGCCTTGCCACGGTGCCAGCAGGCAGCCCTGGG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGGCCGGGAAGAGGTGTaGGCAGCTGAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMGREEV*AAEATG
Trigger: GCCAGTGGCCTCAGCTGCCCACACCTCTTCCCGGCC...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCAGGCCCTGCTCGGGCGTaGCGGGTGGACTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAAGPARA*RVDWDS
Trigger: GGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCC...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCACTGCCCGCTGGGGCTTaGCTGTCAATGACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPLPAGA*LSMTGH
Trigger: GTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAG...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCACCCCCAGCCCAGGGCTaGCTGCTGGCACCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAAPPAQG*LLAPWQ
Trigger: TTGCCACGGTGCCAGCAGGCAGCCCTGGGCTGGGGG...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCTCTCTCGAGACCCACTaGCCCCGCTGCCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHASLETH*PRCRLL
Trigger: GAGAAGGCGGCAGCGGGGGCAGTGGGTCTCGAGAGA...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCAGTGGCTCCTCCCGACTaGTGGCCCCAGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAAVAPPD*WPQGPW
Trigger: CCAAGGCCCCTGGGGCCAGCAGTCGGGAGGAGCCAC...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGCACCAAGTCCAGGCTaGCCGCTGGGGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMAPSPG*PLGLGC
Trigger: ACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGC...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCGAGCGCTGGCGGAACTaGTCCTCCGACATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHAERWRN*SSDMAH
Trigger: GTGCGCCATGTCGGAGGAGCAGTTCCGCCAGCGCTC...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCACTCGGGCGTGGCGGGTaGACTGGGACTCCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAALGRGG*TGTPVP
Trigger: CGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAG...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGCTCAGGCTCCTCAGGTaGCTCCTCCCGACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQLRLLR*LLPTAG
Trigger: GCCAGCAGTCGGGAGGAGCCACCTGAGGAGCCTGAG...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCTTGCCCGCCAGCTCCTaGAAGGCCTTGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHALPASS*KALPMG
Trigger: CCCCATGGGCAAGGCCTTCCAGGAGCTGGCGGGCAA...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCATCCCGGGGGCACTCCTaGCTGCCCAACTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRASRGHS*LPNSGV
Trigger: CACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGA...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCATGGCAAGGCCCAACCTaGGGGGCTTGCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAWQGPT*GACREL
Trigger: CAGCTCCCTGCAAGCCCCTCAGGTTGGGCCTTGCCA...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAGCCCAGGGAGCTGTCTaGTGCAGTGCCAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPAQGAV*CSANFR
Trigger: CCTGAAGTTGGCACTGCAGCAGACAGCTCCCTGGGC...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAGCTGTGTCTGTTAGCTaGCTGGTGCCCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPAVSVS*LVPREL
Trigger: CAGCTCCCTGGGCACCAGGCAGCTAACAGACACAGC...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGACCCGGGCTGGCGCTaGCCATGCCGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQDPGWR*PCRCCL
Trigger: CAAACAGCAGCGGCATGGGCAGCGCCAGCCCGGGTC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCACCACCATGGACTaGACCTGCTCCAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMPTTMD*TCSSEC
Trigger: GCACTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCCATGCCAGGTGTGGTaGAGAATGGGAGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHAPCQVW*RMGGRG
Trigger: CCCCCTGCCTCCCATTCTGCACCACACCTGGCATGG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCATGCCAGGTGTGGTaGAGAATGGGAGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMPCQVW*RMGGRG
Trigger: CCCCCTGCCTCCCATTCTGCACCACACCTGGCATGG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAGTCTGTGGGGCAGTGTaGACACGGCAGAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPVCGAV*TRQSAG
Trigger: TCCTGCACTCTGCCGTGTCCACACTGCCCCACAGAC...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCGTGGCGGGTGGACTaGGACTCCAGTCCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAAWRVD*DSSPVS
Trigger: AGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGC...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGGTCCAGGCTGCCCGCTaGGGCTTGGCTGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQVQAAR*GLAVND
Trigger: GTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGAC...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCACTGCTCCTCCGACATaGCGCACAGCTCCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHATAPPT*RTAPCP
Trigger: CGGGCAAGGAGCTGTGCGCCATGTCGGAGGAGCAGT...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAACTGCCACAGGTGGATaGGCTGCCCGGAGCATGATG +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPTATGG*AARSMM
Trigger: CATCATGCTCCGGGCAGCCCATCCACCTGTGGCAGT...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCACCCCATCTCAGGGCCTaGCTGAGGCAGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAAPHLRA*LRQGRQ
Trigger: CTGCCTGCCCTGCCTCAGCCAGGCCCTGAGATGGGG...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAGGCCTGGACTGCCTGTaGCCTTTGTCGAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPGLDCL*PLSSHC
Trigger: GCAGTGACTCGACAAAGGCCACAGGCAGTCCAGGCC...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGTCCCGGGGGCACTCCTaGCTGCCCAACTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQSRGHS*LPNSGV
Trigger: CACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGA...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGCCGTCTCGATGTCCTTaGGCACTTCGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQPSRCP*ALRPPP
Trigger: TGGTGGTGGGCGAAGTGCTCAAGGACATCGAGACGG...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGAAGGCGGACAGGCCCTaGTCGGGCGTGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGKADRP*SGVAGG
Trigger: TCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCTT...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCCTTGGCTGCCCAGCTaGTGTCCTCAGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHAPWLPS*CPQGTA
Trigger: TGCTGTACCCTGAGGACAGCAGCTGGGCAGCCAAGG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCTCAATGACCGGGCACTaGTCAGGCTCCTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHASMTGH*SGSSGG
Trigger: GCCACCTGAGGAGCCTGAGCAGTGCCCGGTCATTGA...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGTGGCGCACAGCTCCTTaGCCGCCAGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQWRTAP*PPAPGR
Trigger: CCTTCCAGGAGCTGGCGGGCAAGGAGCTGTGCGCCA...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAATGTCCAGGTGGGCGTaGAGCACATCCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAMSRWA*STSPPR
Trigger: CCTGGGTGGGGATGTGCTGCACGCCCACCTGGACAT...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGCACAGGTGGATGGGCTaGCCGGAGCATGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQHRWMG*PEHDES
Trigger: GGACTCATCATGCTCCGGGCAGCCCATCCACCTGTG...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGGGGGCACTCCTGGCTaGCCAACTCAGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQGGTPG*PTQGCR
Trigger: TCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGGTCTGTGGGGCAGTGTaGACACGGCAGAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQVCGAV*TRQSAG
Trigger: TCCTGCACTCTGCCGTGTCCACACTGCCCCACAGAC...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGCCACCCTCAAGGGGTaGCCCTCTGAGGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQATLKG*PSEVSG
Trigger: CCCTGAGACCTCAGAGGGCCACCCCTTGAGGGTGGC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCATCTCAGCCAGGCATCTaGGGGGCCAGCGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAASQPGI*GASGTR
Trigger: CCTGGTTCCGCTGGCCCCCCAGATGCCTGGCTGAGA...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCACTTCGCCCACCACCATaGACTGCACCTGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRALRPPP*TAPAPA
Trigger: CGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGAAG...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGGGGGCAGCCGGTATTaGTGCTCTGTCCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAGGSRY*CSVHRS
Trigger: GCTCCTGTGGACAGAGCACCAATACCGGCTGCCCCC...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGGAAGGCCTTGCCCATaGGGGGCAGCCGGTATTGGT +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAGRPCP*GAAGIG
Trigger: ACCAATACCGGCTGCCCCCCATGGGCAAGGCCTTCC...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGAGGAACTGCCACAGGTaGATGGGCTGCCCGGAGCAT +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMRNCHR*MGCPEH
Trigger: ATGCTCCGGGCAGCCCATCCACCTGTGGCAGTTCCT...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCACACAGCCGGGCCACCTaGGCTGAGTCCTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPHSRAT*AESSIL
Trigger: CAAAATTGAGGACTCAGCCCAGGTGGCCCGGCTGTG...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGCAAGGGGTGGCCCTCTaGGGTCTCAGGGCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGQGVAL*GLRAAC
Trigger: GCACGCAGCCCTGAGACCTCAGAGGGCCACCCCTTG...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAGAGGTGTGGGCAGCTaGGGCCACTGGCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQRGVGS*GHWRVS
Trigger: TGAGACACGCCAGTGGCCTCAGCTGCCCACACCTCT...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCACCGGGCCACCTGGGCTaGGTCCTCAATTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPPGHLG*VLNFED
Trigger: ATCTTCAAAATTGAGGACTCAGCCCAGGTGGCCCGG...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCATTGGTTGCCCCTCCCTaGCCTTGGGCTCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRALVAPP*PWALEG
Trigger: ACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAA...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCACAGCCCAGGGCTGCCTaGTGGCACCGTGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEAQPRAA*WHRGKA
Trigger: GGCCTTGCCACGGTGCCAGCAGGCAGCCCTGGGCTG...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCACTGTTAGCTGCCTGGTaGCCAGGGAGCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRALLAAW*PGSCLL
Trigger: CAGCAGACAGCTCCCTGGGCACCAGGCAGCTAACAG...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGGGCTGGGGGATACGCTaGTCAGACCCGGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGGWGIR*SDPGWR
Trigger: GCGCCAGCCCGGGTCTGAGCAGCGTATCCCCCAGCC...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTAAGGCGGACAGGCCCTaGTCGGGCGTGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCKADRP*SGVAGG
Trigger: TCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCTT...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCACACAGGTGGATGGGCTaGCCGGAGCATGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAHRWMG*PEHDES
Trigger: GGACTCATCATGCTCCGGGCAGCCCATCCACCTGTG...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGGAGAGAGGCCTGGACTaGCTGTGGCCTTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQERGLD*LWPLSS
Trigger: ACTCGACAAAGGCCACAGGCAGTCCAGGCCTCTCTC...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGGTGCAGATGTCTCCCTaGACCATGCCAGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQVQMSP*TMPGVV
Trigger: CACCACACCTGGCATGGTGCAGGGAGACATCTGCAC...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGCAGGCTTGGAGGACTaGGTCTGTGGGGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQAGLED*VCGAVW
Trigger: CCACACTGCCCCACAGACCCAGTCCTCCAAGCCTGC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAGCTGGCAGCAGGCTTaGAGGACTGGGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQSWQQA*RTGSVG
Trigger: CCCCACAGACCCAGTCCTCCAAGCCTGCTGCCAGCT...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGTTCCAGATGTCCAGGTaGGCGTGCAGCACATCCCCA +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMFQMSR*ACSTSP
Trigger: TGGGGATGTGCTGCACGCCCACCTGGACATCTGGAA...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAACTGCCACAGGTGGATaGGCTGCCCGGAGCATGATG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRATATGG*AARSMM
Trigger: CATCATGCTCCGGGCAGCCCATCCACCTGTGGCAGT...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGGCCAGGCACTCAGATaGGGTGCACGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMGQALR*GARTGR
Trigger: TCTACCAGTTCGTGCACCCCATCTGAGTGCCTGGCC...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCACAAGGGGTGGCCCTCTaGGGTCTCAGGGCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEAQGVAL*GLRAAC
Trigger: GCACGCAGCCCTGAGACCTCAGAGGGCCACCCCTTG...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGCCGGGCCACCTGGGCTaGGTCCTCAATTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQPGHLG*VLNFED
Trigger: ATCTTCAAAATTGAGGACTCAGCCCAGGTGGCCCGG...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTGGCTGGCGCTGCCCATaGCGCTGCTGTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCGWRCP*RCCLGW
Trigger: CCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCC...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCCACTTCTGCACATTaGTGGGGCTCCAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAATSAH*WGSSPW
Trigger: CCATGGACTGGAGCCCCAGCAATGTGCAGAAGTGGC...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGAACTCCTTGAGGAACTaGCACAGGTGGATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMNSLRN*HRWMGC
Trigger: GCAGCCCATCCACCTGTGGCAGTTCCTCAAGGAGTT...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGCAGCAGAGCAGACTaGCCGTTTTCCCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHASSRAD*PFSPIS
Trigger: TGAGATGGGGGAAAACGGGCAGTCTGCTCTGCTGCT...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGTGTCTCCCTGCACCATaGCAGGTGTGGTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMCLPAP*QVWCRM
Trigger: CATTCTGCACCACACCTGGCATGGTGCAGGGAGACA...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGTGCAGATGTCTCCCTaGACCATGCCAGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAVQMSP*TMPGVV
Trigger: CACCACACCTGGCATGGTGCAGGGAGACATCTGCAC...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGTGGCCACTGGGGGCCTaGCCACCCTCAAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLWPLGA*PPSRGG
Trigger: GCCACCCCTTGAGGGTGGCCAGGCCCCCAGTGGCCA...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTGGCCGGGAAGAGGTGTaGGCAGCTGAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCGREEV*AAEATG
Trigger: GCCAGTGGCCTCAGCTGCCCACACCTCTTCCCGGCC...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCACGCTGCTGTTTGGGCTaGCGGCTGTGTCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRARCCLG*RLCLLA
Trigger: AGCTAACAGACACAGCCGCCAGCCCAAACAGCAGCG...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGCTCGGGCGTGGCGGGTaGACTGGGACTCCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLLGRGG*TGTPVP
Trigger: CGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAG...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGCTCCTCCCGACTGCTaGCCCCAGGGGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSAPPDC*PQGPWL
Trigger: CAGCCAAGGCCCCTGGGGCCAGCAGTCGGGAGGAGC...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGCTCCTCCCGACTGCTaGCCCCAGGGGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLAPPDC*PQGPWL
Trigger: CAGCCAAGGCCCCTGGGGCCAGCAGTCGGGAGGAGC...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCTGCTCTGGAAATGCTaGGGTCAGAGGCAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHALLWKC*GQRQVL
Trigger: CAACACCTGCCTCTGACCCCAGCATTTCCAGAGCAG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCTGCTCTGGAAATGCTaGGGTCAGAGGCAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMLLWKC*GQRQVL
Trigger: CAACACCTGCCTCTGACCCCAGCATTTCCAGAGCAG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGCAGGAGAGAGGCCCCTaGGGGCGGGTTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLQERGP*GRVSGP
Trigger: AGGGCCTGAAACCCGCCCTCAGGGGCCTCTCTCCTG...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTTCTCTCGAGACCCACTaGCCCCGCTGCCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCSLETH*PRCRLL
Trigger: GAGAAGGCGGCAGCGGGGGCAGTGGGTCTCGAGAGA...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTGAGCGCTGGCGGAACTaGTCCTCCGACATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCERWRN*SSDMAH
Trigger: GTGCGCCATGTCGGAGGAGCAGTTCCGCCAGCGCTC...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCCTGGGGCAGTTGGTTaGCCCTCCCTGACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCPGAVG*PSLTLG
Trigger: GCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGCCTTTGTCGAGTCACTaGCCTTCTGTAGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQPLSSH*PSVGSA
Trigger: AGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCAGAGAGAGGCCTGGACTaGCTGTGGCCTTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAAERGLD*LWPLSS
Trigger: ACTCGACAAAGGCCACAGGCAGTCCAGGCCTCTCTC...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGTGCCCAACTCAGGGGTaGAGATGTCTCCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQCPTQG*RCLPAP
Trigger: TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCA...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGGCAGGCTTGGAGGACTaGGTCTGTGGGGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGAGLED*VCGAVW
Trigger: CCACACTGCCCCACAGACCCAGTCCTCCAAGCCTGC...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTTCTCAGCCAGGCATCTaGGGGGCCAGCGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCSQPGI*GASGTR
Trigger: CCTGGTTCCGCTGGCCCCCCAGATGCCTGGCTGAGA...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGGCGTGGCGGGTGGACTaGGACTCCAGTCCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGAWRVD*DSSPVS
Trigger: AGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGC...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGGGGGGCAGCCGGTATTaGTGCTCTGTCCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGGGSRY*CSVHRS
Trigger: GCTCCTGTGGACAGAGCACCAATACCGGCTGCCCCC...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGTTCCAGATGTCCAGGTaGGCGTGCAGCACATCCCCA +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQFQMSR*ACSTSP
Trigger: TGGGGATGTGCTGCACGCCCACCTGGACATCTGGAA...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGTCCAGCTCTCCTCACTaGTCGAGGCACAGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQSSSPH*SRHSSE
Trigger: TTCACTACTGTGCCTCGACCAGTGAGGAGAGCTGGA...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374037.8
CDS-3UTR CCA 90 bp CCCTGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCTTGTCGTAGTTCATaGCGGGACGGTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PWGSWLPLPDLGLWKVRAACRSS*RDGSCG
Trigger: TCCGCAAGAACCGTCCCGCCATGAACTACGACAAGC...TGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGGCCAGGCACTCAGATaGGGTGCACGAACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQGQALR*GARTGR
Trigger: TCTACCAGTTCGTGCACCCCATCTGAGTGCCTGGCC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGCCCCATCTCAGGGCCTaGCTGAGGCAGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLPHLRA*LRQGRQ
Trigger: CTGCCTGCCCTGCCTCAGCCAGGCCCTGAGATGGGG...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGAGAGGTGTGGGCAGCTaGGGCCACTGGCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGRGVGS*GHWRVS
Trigger: TGAGACACGCCAGTGGCCTCAGCTGCCCACACCTCT...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGTTGGTTGCCCCTCCCTaGCCTTGGGCTCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGLVAPP*PWALEG
Trigger: ACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAA...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGAGCAGCTGGGCCTaGGGAGGAAGCACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQGSSWA*GGSTPA
Trigger: GGCAGGGGTGCTTCCTCCTCAGGCCCAGCTGCTCCC...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGCACCAAGTCCAGGCTaGCCGCTGGGGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLAPSPG*PLGLGC
Trigger: ACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGC...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGACCTGCTCCAGCGAGTaGTCCTCCAAGGTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGTCSSE*SSKVSP
Trigger: CGGGCTGACCTTGGAGGAGCACTCGCTGGAGCAGGT...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGGGCAGCCGGTATTGGTaGTCTGTCCACAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGGSRYW*SVHRSH
Trigger: GTGGCTCCTGTGGACAGAGCACCAATACCGGCTGCC...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGATGTCCAGGTGGGCGTaGAGCACATCCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGMSRWA*STSPPR
Trigger: CCTGGGTGGGGATGTGCTGCACGCCCACCTGGACAT...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCATGTCTCCCTGCACCATaGCAGGTGTGGTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAACLPAP*QVWCRM
Trigger: CATTCTGCACCACACCTGGCATGGTGCAGGGAGACA...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGCCACCCTCAAGGGGTaGCCCTCTGAGGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSATLKG*PSEVSG
Trigger: CCCTGAGACCTCAGAGGGCCACCCCTTGAGGGTGGC...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGTGGCCACTGGGGGCCTaGCCACCCTCAAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQWPLGA*PPSRGG
Trigger: GCCACCCCTTGAGGGTGGCCAGGCCCCCAGTGGCCA...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCACTGCCCGCTGGGGCTTaGCTGTCAATGACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSLPAGA*LSMTGH
Trigger: GTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAG...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTGTCCAGGCTGCCCGCTaGGGCTTGGCTGTCAATGAC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCVQAAR*GLAVND
Trigger: GTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGAC...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGCTTCGCCCACCACCATaGACTGCACCTGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGLRPPP*TAPAPA
Trigger: CGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGAAG...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCATTGCCCGCCAGCTCCTaGAAGGCCTTGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSLPASS*KALPMG
Trigger: CCCCATGGGCAAGGCCTTCCAGGAGCTGGCGGGCAA...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCAACTGCTCCTCCGACATaGCGCACAGCTCCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEATAPPT*RTAPCP
Trigger: CGGGCAAGGAGCTGTGCGCCATGTCGGAGGAGCAGT...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTGGACCCATATCCCCCTaGGGCAGTTGGTTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCGPISP*GSWLPL
Trigger: GAGGGGCAACCAACTGCCCCAGGGGGATATGGGTCC...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGAGGTGTGGTGCAGAATaGGAGGCAGGGGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGRCGAE*EAGGWS
Trigger: GCTCCATCCCCCTGCCTCCCATTCTGCACCACACCT...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGTCCAGCTCTCCTCACTaGTCGAGGCTGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQSSSPH*SRLTSR
Trigger: TCTGGAAGTCAGCCTCGACCAGTGAGGAGAGCTGGA...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544425.2
CDS-3UTR TCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCCGTCTCGATGTCCTTaGGCACTTCGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCPSRCP*ALRPPP
Trigger: TGGTGGTGGGCGAAGTGCTCAAGGACATCGAGACGG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGTGTCTGGCTTCCGGATaGTGCCCTTCTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQCLASG*CPSCNT
Trigger: AGTATTACAAGAAGGGCATCATCCGGAAGCCAGACA...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCACAGGGAGCTGTCTGCTaGAGTGCCAACTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEAQGAVC*SANFRG
Trigger: GCCCCTGAAGTTGGCACTGCAGCAGACAGCTCCCTG...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCAGGGAGCTGTCTGCTaGAGTGCCAACTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCQGAVC*SANFRG
Trigger: GCCCCTGAAGTTGGCACTGCAGCAGACAGCTCCCTG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCACTGTTAGCTGCCTGGTaGCCAGGGAGCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEALLAAW*PGSCLL
Trigger: CAGCAGACAGCTCCCTGGGCACCAGGCAGCTAACAG...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCAGCTGTGTCTGTTAGCTaGCTGGTGCCCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEAAVSVS*LVPREL
Trigger: CAGCTCCCTGGGCACCAGGCAGCTAACAGACACAGC...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGCGCTGCCCATGCCGCTaGTGTTTGGGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQRCPCR*CLGWRL
Trigger: CAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCG...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGACCTGCTCCAGCGAGTaGTCCTCCAAGGTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLTCSSE*SSKVSP
Trigger: CGGGCTGACCTTGGAGGAGCACTCGCTGGAGCAGGT...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGCCTTTGTCGAGTCACTaGCCTTCTGTAGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQPLSSH*PSVGSA
Trigger: AGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGGAGGACTGGGTCTGTaGGGCAGTGTGGACACGGCA +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSGGLGL*GSVDTA
Trigger: TGCCGTGTCCACACTGCCCCACAGACCCAGTCCTCC...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAAGCTGGCAGCAGGCTTaGAGGACTGGGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSSWQQA*RTGSVG
Trigger: CCCCACAGACCCAGTCCTCCAAGCCTGCTGCCAGCT...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGCGCTGCTGTTTGGGCTaGCGGCTGTGTCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGRCCLG*RLCLLA
Trigger: AGCTAACAGACACAGCCGCCAGCCCAAACAGCAGCG...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGCATGCCGCTGCTGTTTaGGCTGGCGGCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGHAAAV*AGGCVC
Trigger: ACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATG...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGACTTCTGCACATTGCTaGGGCTCCAGTCCATGGGAT +
Preference number: 4 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQTSAHC*GSSPWD
Trigger: ATCCCATGGACTGGAGCCCCAGCAATGTGCAGAAGT...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGAAGGCCTTGCCCATaGGGGGCAGCCGGTATTGGT +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLGRPCP*GAAGIG
Trigger: ACCAATACCGGCTGCCCCCCATGGGCAAGGCCTTCC...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGGACCCATATCCCCCTaGGGCAGTTGGTTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSGPISP*GSWLPL
Trigger: GAGGGGCAACCAACTGCCCCAGGGGGATATGGGTCC...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp GGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCCTGAGTCCTCAATTTTaGAGATGCCCTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GALLAAQLRGADVSLHHALSPQF*RCPSPC
Trigger: ACAAGGAGAAGGGCATCTTCAAAATTGAGGACTCAG...GGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCTGAGTCCTCAATTTTaGAGATGCCCTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMLSPQF*RCPSPC
Trigger: ACAAGGAGAAGGGCATCTTCAAAATTGAGGACTCAG...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCATCAATGACCGGGCACTaGTCAGGCTCCTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSSMTGH*SGSSGG
Trigger: GCCACCTGAGGAGCCTGAGCAGTGCCCGGTCATTGA...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCACAGGAGCCACTTCTaGACATTGCTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCHRSHF*TLLGLQ
Trigger: CTGGAGCCCCAGCAATGTGCAGAAGTGGCTCCTGTG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTTGCCCAACTCAGGGGTaGAGATGTCTCCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCCPTQG*RCLPAP
Trigger: TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCA...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCACATGCCGCTGCTGTTTaGGCTGGCGGCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSHAAAV*AGGCVC
Trigger: ACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATG...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGCTCAGGCTCCTCAGGTaGCTCCTCCCGACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQLRLLR*LLPTAG
Trigger: GCCAGCAGTCGGGAGGAGCCACCTGAGGAGCCTGAG...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCACAGCCGGGCCACCTaGGCTGAGTCCTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCHSRAT*AESSIL
Trigger: CAAAATTGAGGACTCAGCCCAGGTGGCCCGGCTGTG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGGCTTGTCGTAGTTCATaGCGGGACGGTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGACRSS*RDGSCG
Trigger: TCCGCAAGAACCGTCCCGCCATGAACTACGACAAGC...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTGCGCTGGGAGATGTCTaGCTTCCGGATGATGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCALGDV*LPDDAL
Trigger: AAGGGCATCATCCGGAAGCCAGACATCTCCCAGCGC...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGCCTGGACTGCCTGTaGCCTTTGTCGAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLGLDCL*PLSSHC
Trigger: GCAGTGACTCGACAAAGGCCACAGGCAGTCCAGGCC...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAAGGTGTGGTGCAGAATaGGAGGCAGGGGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSRCGAE*EAGGWS
Trigger: GCTCCATCCCCCTGCCTCCCATTCTGCACCACACCT...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCATTTCATCCAGGCCGCTaGCTTCCAGATGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEAFHPGR*LPDVQV
Trigger: CACCTGGACATCTGGAAGTCAGCGGCCTGGATGAAA...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374037.8
CDS-3UTR TCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCAGTGAATCGCCCCAGGTaGAGTCCGCTCTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEAVNRPR*SPLFHP
Trigger: TGGATGAAAGAGCGGACTTCACCTGGGGCGATTCAC...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374037.8
CDS-3UTR GCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGCCCACCACCATGGACTaGACCTGCTCCAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQPTTMD*TCSSEC
Trigger: GCACTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGG...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGCACAGGAGCCACTTCTaGACATTGCTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLHRSHF*TLLGLQ
Trigger: CTGGAGCCCCAGCAATGTGCAGAAGTGGCTCCTGTG...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCAAACTCCTTGAGGAACTaGCACAGGTGGATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEANSLRN*HRWMGC
Trigger: GCAGCCCATCCACCTGTGGCAGTTCCTCAAGGAGTT...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCAAGCAGCAGAGCAGACTaGCCGTTTTCCCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: SSHCPSVGSALEMLGSEASSRAD*PFSPIS
Trigger: TGAGATGGGGGAAAACGGGCAGTCTGCTCTGCTGCT...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCCCTTCTGTAGGCTCTaGTCTGGAAATGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCPFCRL*SGNAGV
Trigger: GACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTAGTGCAGGAATGTGCTaGGAGGAAGTCAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCSAGMC*EEVRQP
Trigger: CGGCTGTCTGACTTCCTCCCAGCACATTCCTGCACT...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGCGCTGGGAGATGTCTaGCTTCCGGATGATGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSALGDV*LPDDAL
Trigger: AAGGGCATCATCCGGAAGCCAGACATCTCCCAGCGC...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCAGAGTGCAGGAATGTaGTGGGAGGAAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCQSAGM*WEEVRQ
Trigger: CTGTCTGACTTCCTCCCAGCACATTCCTGCACTCTG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGCCTTGGCTGCCCAGCTaGTGTCCTCAGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQPWLPS*CPQGTA
Trigger: TGCTGTACCCTGAGGACAGCAGCTGGGCAGCCAAGG...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGCAGCCGGTATTGGTaGTCTGTCCACAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQGSRYW*SVHRSH
Trigger: GTGGCTCCTGTGGACAGAGCACCAATACCGGCTGCC...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGCCCTTCTGTAGGCTCTaGTCTGGAAATGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLPFCRL*SGNAGV
Trigger: GACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGG...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGAGGAACTGCCACAGGTaGATGGGCTGCCCGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQRNCHR*MGCPEH
Trigger: ATGCTCCGGGCAGCCCATCCACCTGTGGCAGTTCCT...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR TCA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGTGTCTGGCTTCCGGATaGTGCCCTTCTTGTAATACT +
Preference number: 4 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGCLASG*CPSCNT
Trigger: AGTATTACAAGAAGGGCATCATCCGGAAGCCAGACA...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR GCA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCACAGAGTGCAGGAATGTaGTGGGAGGAAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSQSAGM*WEEVRQ
Trigger: CTGTCTGACTTCCTCCCAGCACATTCCTGCACTCTG...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp CTGTGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGACTTCTGCACATTGCTaGGGCTCCAGTCCATGGGAT +
Preference number: 4 (lower is better)
Translates to: LWPLSSHCPSVGSALEMLTSAHC*GSSPWD
Trigger: ATCCCATGGACTGGAGCCCCAGCAATGTGCAGAAGT...CAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CCA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGAGTGCAGGAATGTGCTaGGAGGAAGTCAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQSAGMC*EEVRQP
Trigger: CGGCTGTCTGACTTCCTCCCAGCACATTCCTGCACT...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp AGAGGTAGAAGGCGGACAGGCCCTGCTCGGGCGTGGCGGGTGGACTaGGACTCCAGTCCCGTCTCTCGAGACCCACTGCCCCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: RGRRRTGPARAWRVD*DSSPVSRDPLPPLP
Trigger: CGGCAGCGGGGGCAGTGGGTCTCGAGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCTTCTACCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS TCA 90 bp CGCCGGGCACCAAGTCCAGGCTGCCCGCTGGGGCTTGGCTGTCAATaGCCGGGCACTGCTCAGGCTCCTCAGGTGGCTCCTCCCGACTGC +
Preference number: 5 (lower is better)
Translates to: RRAPSPGCPLGLGCQ*PGTAQAPQVAPPDC
Trigger: GCAGTCGGGAGGAGCCACCTGAGGAGCCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGCCCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 90 bp CGTGGCGGGTGGACTGGGACTCCAGTCCCGTCTCTCGAGACCCACTaGCCCCGCTGCCGCCTTCTCCAAGCCTGTCCGCGACACCGTGTC +
Preference number: 5 (lower is better)
Translates to: RGGWTGTPVPSLETH*PRCRLLQACPRHRV
Trigger: GACACGGTGTCGCGGACAGGCTTGGAGAAGGCGGCAGCGGGGGCAGTGGGTCTCGAGAGACGGGACTGGAGTCCCAGTCCACCCGCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp CAGGGCTGGTGGCAGAGGCAGCACTCAGGTTGGCCACTGGGGGCCTaGCCACCCTCAAGGGGTGGCCCTCTGAGGTCTCAGGGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: QGWWQRQHSGWPLGA*PPSRGGPLRSQGCV
Trigger: CACGCAGCCCTGAGACCTCAGAGGGCCACCCCTTGAGGGTGGCCAGGCCCCCAGTGGCCAACCTGAGTGCTGCCTCTGCCACCAGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp GTAGGAGAGGTAGAAGGCGGACAGGCCCTGCTCGGGCGTGGCGGGTaGACTGGGACTCCAGTCCCGTCTCTCGAGACCCACTGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: VGEVEGGQALLGRGG*TGTPVPSLETHCPR
Trigger: GCGGGGGCAGTGGGTCTCGAGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCTTCTACCTCTCCTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp ATGTCCAGGTGGGCGTGCAGCACATCCCCACCCAGGGGCGAGCGCTaGCGGAACTGCTCCTCCGACATGGCGCACAGCTCCTTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: MSRWACSTSPPRGER*RNCSSDMAHSSLPA
Trigger: GGCGGGCAAGGAGCTGTGCGCCATGTCGGAGGAGCAGTTCCGCCAGCGCTCGCCCCTGGGTGGGGATGTGCTGCACGCCCACCTGGACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 90 bp GGTGGCTGGGGGATACGCTGCTCAGACCCGGGCTGGCGCTGCCCATaGCGCTGCTGTTTGGGCTGGCGGCTGTGTCTGTTAGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGWGIRCSDPGWRCP*RCCLGWRLCLLAAW
Trigger: CCAGGCAGCTAACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCCCGGGTCTGAGCAGCGTATCCCCCAGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 90 bp AAGTCCAGGCTGCCCGCTGGGGCTTGGCTGTCAATGACCGGGCACTaGTCAGGCTCCTCAGGTGGCTCCTCCCGACTGCTGGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: KSRLPAGAWLSMTGH*SGSSGGSSRLLAPG
Trigger: CCCTGGGGCCAGCAGTCGGGAGGAGCCACCTGAGGAGCCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp AAGGTCAGCCCGCCGGGCACCAAGTCCAGGCTGCCCGCTGGGGCTTaGCTGTCAATGACCGGGCACTGCTCAGGCTCCTCAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: KVSPPGTKSRLPAGA*LSMTGHCSGSSGGS
Trigger: GGAGCCACCTGAGGAGCCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGCCCGGCGGGCTGACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp CTCCTCCAAGGTCAGCCCGCCGGGCACCAAGTCCAGGCTGCCCGCTaGGGCTTGGCTGTCAATGACCGGGCACTGCTCAGGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LLQGQPAGHQVQAAR*GLAVNDRALLRLLR
Trigger: CCTGAGGAGCCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGCCCGGCGGGCTGACCTTGGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAATGGCGGGACGGTTCTaGCGGATGCCCCACAGCCGG +
Preference number: 5 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPMAGRF*RMPHSR
Trigger: CCGGCTGTGGGGCATCCGCAAGAACCGTCCCGCCAT...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 90 bp TGGGGGATACGCTGCTCAGACCCGGGCTGGCGCTGCCCATGCCGCTaGTGTTTGGGCTGGCGGCTGTGTCTGTTAGCTGCCTGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: WGIRCSDPGWRCPCR*CLGWRLCLLAAWCP
Trigger: TGGGCACCAGGCAGCTAACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCCCGGGTCTGAGCAGCGTATCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGCTGGCCCCAGGGGCCTaGGCTGCCCAGCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQLAPGA*AAQLLS
Trigger: GGACAGCAGCTGGGCAGCCAAGGCCCCTGGGGCCAG...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGGCTGCCCGCTGGGGCTaGGCTGTCAATGACCGGGCA +
Preference number: 5 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQAARWG*AVNDRA
Trigger: TGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGC...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGCCCTGGGGCAGTTGGTaGCCCCTCCCTGACCTTGGG +
Preference number: 5 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQPWGSW*PLPDLG
Trigger: CCCAAGGTCAGGGAGGGGCAACCAACTGCCCCAGGG...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 90 bp TTGAGCACTTCGCCCACCACCATGGACTGCACCTGCTCCAGCGAGTaGTCCTCCAAGGTCAGCCCGCCGGGCACCAAGTCCAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSTSPTTMDCTCSSE*SSKVSPPGTKSRLP
Trigger: GGGCAGCCTGGACTTGGTGCCCGGCGGGCTGACCTTGGAGGAGCACTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGAAGTGCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 90 bp CAGGCCGTCTCGATGTCCTTGAGCACTTCGCCCACCACCATGGACTaGACCTGCTCCAGCGAGTGCTCCTCCAAGGTCAGCCCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: QAVSMSLSTSPTTMD*TCSSECSSKVSPPG
Trigger: GCCCGGCGGGCTGACCTTGGAGGAGCACTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGAAGTGCTCAAGGACATCGAGACGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp GAGGCCCCTGAGGGCGGGTTTCAGGCCCTGGGCCAGGCACTCAGATaGGGTGCACGAACTGGTAGACGAGGCGCTGGGAGATGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: EAPEGGFQALGQALR*GARTGRRGAGRCLA
Trigger: AGCCAGACATCTCCCAGCGCCTCGTCTACCAGTTCGTGCACCCCATCTGAGTGCCTGGCCCAGGGCCTGAAACCCGCCCTCAGGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCAGCCGTCTCGATGTCCTaGAGCACTTCGCCCACCACC +
Preference number: 5 (lower is better)
Translates to: PGGTPGCPTQGCRCLPAPAVSMS*STSPTT
Trigger: GGTGGTGGGCGAAGTGCTCAAGGACATCGAGACGGC...TGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGATGGCGCACAGCTCCTaGCCCGCCAGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQMAHSS*PASSWK
Trigger: CTTCCAGGAGCTGGCGGGCAAGGAGCTGTGCGCCAT...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCAATGGCGGGACGGTTCTaGCGGATGCCCCACAGCCGG +
Preference number: 5 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAAMAGRF*RMPHSR
Trigger: CCGGCTGTGGGGCATCCGCAAGAACCGTCCCGCCAT...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 90 bp GTCTCGATGTCCTTGAGCACTTCGCCCACCACCATGGACTGCACCTaGTCCAGCGAGTGCTCCTCCAAGGTCAGCCCGCCGGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: VSMSLSTSPTTMDCT*SSECSSKVSPPGTK
Trigger: CTTGGTGCCCGGCGGGCTGACCTTGGAGGAGCACTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGAAGTGCTCAAGGACATCGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp TGTCAAAGTAGGAGAGGTAGAAGGCGGACAGGCCCTGCTCGGGCGTaGCGGGTGGACTGGGACTCCAGTCCCGTCTCTCGAGACCCACTG +
Preference number: 5 (lower is better)
Translates to: CQSRRGRRRTGPARA*RVDWDSSPVSRDPL
Trigger: CAGTGGGTCTCGAGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCTTCTACCTCTCCTACTTTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGCCATGCCGCTGCTGTTaGGGCTGGCGGCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQPCRCC*GWRLCL
Trigger: CAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGG...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTGGCCCCAGGGGCCTaGGCTGCCCAGCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCLAPGA*AAQLLS
Trigger: GGACAGCAGCTGGGCAGCCAAGGCCCCTGGGGCCAG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGGTGATGTTGAGCAGCTaGCAGGCCGTCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: RGHSWLPNSGVQMSPCTMVMLSS*QAVSMS
Trigger: GGACATCGAGACGGCCTGCAAGCTGCTCAACATCAC...CATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TGGGGCAGTTGGTTGCCCCTCCCTGACCTTGGGCTCTGGAAGGTCAGAGCAGCATGCCCCTCCCTGACCTaGGGCTCTGGAAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: WGSWLPLPDLGLWKVRAACPSLT*GSGRSE
Trigger: CTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCA...TGCTGCTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCAACCAACTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGGATCTGCGGTGATGTaGAGCAGCTTGCAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQGSAVM*SSLQAV
Trigger: GACGGCCTGCAAGCTGCTCAACATCACCGCAGATCC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTCCATGCCGCTGCTGTTaGGGCTGGCGGCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCPCRCC*GWRLCL
Trigger: CAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGG...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp AACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAATGGGGCCGTCTCGATGTCCTaGAGCACTTCGCCCACCACC +
Preference number: 5 (lower is better)
Translates to: NSGVQMSPCTMPGVVQNGAVSMS*STSPTT
Trigger: GGTGGTGGGCGAAGTGCTCAAGGACATCGAGACGGC...CCCATTCTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp GCAGAGCAGACTGCCCGTTTTCCCCCATCTCAGGGCCTGGCTGAGGCAGGGCAGATGCCCTTCTCCTTGTaGAGCCACCTAATGAAGCGG +
Preference number: 5 (lower is better)
Translates to: AEQTARFPPSQGLAEAGQMPFSL*SHLMKR
Trigger: CCGCTTCATTAGGTGGCTCAACAAGGAGAAGGGCAT...CTGCCCTGCCTCAGCCAGGCCCTGAGATGGGGGAAAACGGGCAGTCTGCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGGACTGCCTGTGGCCTTaGTCGAGTCACTGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQDCLWP*SSHCPS
Trigger: AGAAGGGCAGTGACTCGACAAAGGCCACAGGCAGTC...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAATGGCGCACAGCTCCTaGCCCGCCAGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLSSHCPSVGSALEMLGSMAHSS*PASSWK
Trigger: CTTCCAGGAGCTGGCGGGCAAGGAGCTGTGCGCCAT...TGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TGGCCTTTGTCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGGGATCTGCGGTGATGTaGAGCAGCTTGCAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: WPLSSHCPSVGSALEMLGGSAVM*SSLQAV
Trigger: GACGGCCTGCAAGCTGCTCAACATCACCGCAGATCC...CCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGATGCCCTTCTCCTTGTaGAGCCACCTAATGAAGCGG +
Preference number: 5 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQMPFSL*SHLMKR
Trigger: CCGCTTCATTAGGTGGCTCAACAAGGAGAAGGGCAT...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 90 bp TCAGATGGGGTGCACGAACTGGTAGACGAGGCGCTGGGAGATGTCTaGCTTCCGGATGATGCCCTTCTTGTAATACTGGCGGATGGAGCG +
Preference number: 5 (lower is better)
Translates to: SDGVHELVDEALGDV*LPDDALLVILADGA
Trigger: CGCTCCATCCGCCAGTATTACAAGAAGGGCATCATCCGGAAGCCAGACATCTCCCAGCGCCTCGTCTACCAGTTCGTGCACCCCATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGGGGTGCAGATGTGTGATGTTGAGCAGCTaGCAGGCCGTCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: LLSIPGGTPGCPTQGCRCVMLSS*QAVSMS
Trigger: GGACATCGAGACGGCCTGCAAGCTGCTCAACATCAC...ACATCTGCACCCCTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TCGAGTCACTGCCCTTCTGTAGGCTCTGCTCTGGAAATGCTGGGGTCAGAGGCAGACTGCCTGTGGCCTTaGTCGAGTCACTGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SSHCPSVGSALEMLGSEADCLWP*SSHCPS
Trigger: AGAAGGGCAGTGACTCGACAAAGGCCACAGGCAGTC...TGCCTCTGACCCCAGCATTTCCAGAGCAGAGCCTACAGAAGGGCAGTGACTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp CTGCCCAACTCAGGGGTGCAGATGTCTCCCTGCACCATGCCAGGTGTGGTGCAGAAGATGCCCTTCTCCTaGTTGAGCCACCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: LPNSGVQMSPCTMPGVVQKMPFS*LSHLMK
Trigger: CTTCATTAGGTGGCTCAACAAGGAGAAGGGCATCTT...CTGCACCACACCTGGCATGGTGCAGGGAGACATCTGCACCCCTGAGTTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGTGCCCCTCCCTGACCTaGGGCTCTGGAAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQCPSLT*GSGRSE
Trigger: CTCTGACCTTCCAGAGCCCAAGGTCAGGGAGGGGCA...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS-3UTR CAA 90 bp TCTCTAGTATCTTTATTATCCATTCCCGGGGGCACTCCTGGCTGCCCAACTCAGAAGATGCCCTTCTCCTaGTTGAGCCACCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: SLVSLLSIPGGTPGCPTQKMPFS*LSHLMK
Trigger: CTTCATTAGGTGGCTCAACAAGGAGAAGGGCATCTT...CTGAGTTGGGCAGCCAGGAGTGCCCCCGGGAATGGATAATAAAGATACTAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp AGGCGGACAGGCCCTGCTCGGGCGTGGCGGGTGGACTaGGACTCCAGTCCCGTCTCTCGAGACCCACTGCCC +
Preference number: 6 (lower is better)
Translates to: RRTGPARAWRVD*DSSPVSRDPLP
Trigger: GGGCAGTGGGTCTCGAGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp CCGGGCTGGCGCTGCCCATGCCGCTGCTGTTTGGGCTaGCGGCTGTGTCTGTTAGCTGCCTGGTGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: PGWRCPCRCCLG*RLCLLAAWCPG
Trigger: CCCTGGGCACCAGGCAGCTAACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp GGTCAGCCCGCCGGGCACCAAGTCCAGGCTGCCCGCTaGGGCTTGGCTGTCAATGACCGGGCACTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: GQPAGHQVQAAR*GLAVNDRALLR
Trigger: CCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGCCCGGCGGGCTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp TGGGCGTGCAGCACATCCCCACCCAGGGGCGAGCGCTaGCGGAACTGCTCCTCCGACATGGCGCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: WACSTSPPRGER*RNCSSDMAHSS
Trigger: GGAGCTGTGCGCCATGTCGGAGGAGCAGTTCCGCCAGCGCTCGCCCCTGGGTGGGGATGTGCTGCACGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CAA 72 bp CCCGCCGGGCACCAAGTCCAGGCTGCCCGCTGGGGCTaGGCTGTCAATGACCGGGCACTGCTCAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: PAGHQVQAARWG*AVNDRALLRLL
Trigger: GAGGAGCCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGCCCGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CAA 90 bp CAAGGTCAGCCCGCCGGGCACCAAGTCCAGGCTGCCCGCTGGGGCTaGGCTGTCAATGACCGGGCACTGCTCAGGCTCCTCAGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: QGQPAGHQVQAARWG*AVNDRALLRLLRWL
Trigger: GAGCCACCTGAGGAGCCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGCCCGGCGGGCTGACCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp CGCTGCTCAGACCCGGGCTGGCGCTGCCCATGCCGCTaGTGTTTGGGCTGGCGGCTGTGTCTGTTAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RCSDPGWRCPCR*CLGWRLCLLAA
Trigger: GGCAGCTAACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCCCGGGTCTGAGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp GGCGGAACTGCTCCTCCGACATGGCGCACAGCTCCTTaGCCGCCAGCTCCTGGAAGGCCTTGCCCATGGGGG +
Preference number: 6 (lower is better)
Translates to: GGTAPPTWRTAP*PPAPGRPCPWG
Trigger: CCCCCATGGGCAAGGCCTTCCAGGAGCTGGCGGGCAAGGAGCTGTGCGCCATGTCGGAGGAGCAGTTCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp GTAGAAGGCGGACAGGCCCTGCTCGGGCGTGGCGGGTaGACTGGGACTCCAGTCCCGTCTCTCGAGACCCAC +
Preference number: 6 (lower is better)
Translates to: VEGGQALLGRGG*TGTPVPSLETH
Trigger: GTGGGTCTCGAGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCTTCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp CCGCCGGGCACCAAGTCCAGGCTGCCCGCTGGGGCTTaGCTGTCAATGACCGGGCACTGCTCAGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PPGTKSRLPAGA*LSMTGHCSGSS
Trigger: TGAGGAGCCTGAGCAGTGCCCGGTCATTGACAGCCAAGCCCCAGCGGGCAGCCTGGACTTGGTGCCCGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp ACTCCAGTCCCGTCTCTCGAGACCCACTGCCCCCGCTaGCGCCTTCTCCAAGCCTGTCCGCGACACCGTGTC +
Preference number: 6 (lower is better)
Translates to: TPVPSLETHCPR*RLLQACPRHRV
Trigger: GACACGGTGTCGCGGACAGGCTTGGAGAAGGCGGCAGCGGGGGCAGTGGGTCTCGAGAGACGGGACTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp TGGACTGGGACTCCAGTCCCGTCTCTCGAGACCCACTaGCCCCGCTGCCGCCTTCTCCAAGCCTGTCCGCGA +
Preference number: 6 (lower is better)
Translates to: WTGTPVPSLETH*PRCRLLQACPR
Trigger: TCGCGGACAGGCTTGGAGAAGGCGGCAGCGGGGGCAGTGGGTCTCGAGAGACGGGACTGGAGTCCCAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp TCGCCCACCACCATGGACTGCACCTGCTCCAGCGAGTaGTCCTCCAAGGTCAGCCCGCCGGGCACCAAGTCC +
Preference number: 6 (lower is better)
Translates to: SPTTMDCTCSSE*SSKVSPPGTKS
Trigger: GGACTTGGTGCCCGGCGGGCTGACCTTGGAGGAGCACTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp AGGAGAGGTAGAAGGCGGACAGGCCCTGCTCGGGCGTaGCGGGTGGACTGGGACTCCAGTCCCGTCTCTCGA +
Preference number: 6 (lower is better)
Translates to: RRGRRRTGPARA*RVDWDSSPVSR
Trigger: TCGAGAGACGGGACTGGAGTCCCAGTCCACCCGCCACGCCCGAGCAGGGCCTGTCCGCCTTCTACCTCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CAA 72 bp TCAGACCCGGGCTGGCGCTGCCCATGCCGCTGCTGTTaGGGCTGGCGGCTGTGTCTGTTAGCTGCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: SDPGWRCPCRCC*GWRLCLLAAWC
Trigger: GCACCAGGCAGCTAACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCCCGGGTCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS TCA 72 bp TGCCAACTTCAGGGGCCGGGAAGAGGTGTGGGCAGCTaGGGCCACTGGCGTGTCTCAGCCAGGCATCTGGGG +
Preference number: 6 (lower is better)
Translates to: CQLQGPGRGVGS*GHWRVSARHLG
Trigger: CCCCAGATGCCTGGCTGAGACACGCCAGTGGCCTCAGCTGCCCACACCTCTTCCCGGCCCCTGAAGTTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp GGGATACGCTGCTCAGACCCGGGCTGGCGCTGCCCATaGCGCTGCTGTTTGGGCTGGCGGCTGTGTCTGTTA +
Preference number: 6 (lower is better)
Translates to: GIRCSDPGWRCP*RCCLGWRLCLL
Trigger: TAACAGACACAGCCGCCAGCCCAAACAGCAGCGGCATGGGCAGCGCCAGCCCGGGTCTGAGCAGCGTATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp TCCTCACTGGTCGAGGCTGACTTCCAGATGTCCAGGTaGGCGTGCAGCACATCCCCACCCAGGGGCGAGCGC +
Preference number: 6 (lower is better)
Translates to: SSLVEADFQMSR*ACSTSPPRGER
Trigger: GCGCTCGCCCCTGGGTGGGGATGTGCTGCACGCCCACCTGGACATCTGGAAGTCAGCCTCGACCAGTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544425.2
CDS CAA 90 bp GGATCTGCGGTGATGTTGAGCAGCTTGCAGGCCGTCTCGATGTCCTaGAGCACTTCGCCCACCACCATGGACTGCACCTGCTCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: GSAVMLSSLQAVSMS*STSPTTMDCTCSSE
Trigger: CTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGAAGTGCTCAAGGACATCGAGACGGCCTGCAAGCTGCTCAACATCACCGCAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp TCGATGTCCTTGAGCACTTCGCCCACCACCATGGACTaGACCTGCTCCAGCGAGTGCTCCTCCAAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SMSLSTSPTTMD*TCSSECSSKVS
Trigger: GCTGACCTTGGAGGAGCACTCGCTGGAGCAGGTGCAGTCCATGGTGGTGGGCGAAGTGCTCAAGGACATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CAA 90 bp GGCAGCCGGTATTGGTGCTCTGTCCACAGGAGCCACTTCTGCACATaGCTGGGGCTCCAGTCCATGGGATCTGCGGTGATGTTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GSRYWCSVHRSHFCT*LGLQSMGSAVMLSS
Trigger: GCTGCTCAACATCACCGCAGATCCCATGGACTGGAGCCCCAGCAATGTGCAGAAGTGGCTCCTGTGGACAGAGCACCAATACCGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS GCA 72 bp AGCCGGTATTGGTGCTCTGTCCACAGGAGCCACTTCTaGACATTGCTGGGGCTCCAGTCCATGGGATCTGCG +
Preference number: 6 (lower is better)
Translates to: SRYWCSVHRSHF*TLLGLQSMGSA
Trigger: CGCAGATCCCATGGACTGGAGCCCCAGCAATGTGCAGAAGTGGCTCCTGTGGACAGAGCACCAATACCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CAA 72 bp GTGATGTTGAGCAGCTTGCAGGCCGTCTCGATGTCCTaGAGCACTTCGCCCACCACCATGGACTGCACCTGC +
Preference number: 6 (lower is better)
Translates to: VMLSSLQAVSMS*STSPTTMDCTC
Trigger: GCAGGTGCAGTCCATGGTGGTGGGCGAAGTGCTCAAGGACATCGAGACGGCCTGCAAGCTGCTCAACATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CAA 72 bp CTCCAGTCCATGGGATCTGCGGTGATGTTGAGCAGCTaGCAGGCCGTCTCGATGTCCTTGAGCACTTCGCCC +
Preference number: 6 (lower is better)
Translates to: LQSMGSAVMLSS*QAVSMSLSTSP
Trigger: GGGCGAAGTGCTCAAGGACATCGAGACGGCCTGCAAGCTGCTCAACATCACCGCAGATCCCATGGACTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2
CDS CCA 72 bp GTGCACGAACTGGTAGACGAGGCGCTGGGAGATGTCTaGCTTCCGGATGATGCCCTTCTTGTAATACTGGCG +
Preference number: 6 (lower is better)
Translates to: VHELVDEALGDV*LPDDALLVILA
Trigger: CGCCAGTATTACAAGAAGGGCATCATCCGGAAGCCAGACATCTCCCAGCGCCTCGTCTACCAGTTCGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374037.8
ENST00000544425.2