Pregenerated sensors for SPCS3 (Homo sapiens)
Ensembl gene IDs: ENSG00000129128Ensembl transcript IDs: ENST00000503362.2, ENST00000507001.1, ENST00000507678.5, ENST00000513139.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAGGCAGTTTAGCATTCAGGTACCTTTGACCTTTCTGCTGGTTTaGAAAACCCATACCCACAGGCTTTTGCATGAACTATACAACTCC | + |
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Preference number: 1 (lower is better) Translates to: ARQFSIQVPLTFLLV*KTHTHRLLHELYNS Trigger: GGAGTTGTATAGTTCATGCAAAAGCCTGTGGGTATGGGTTTTTCAAACCAGCAGAAAGGTCAAAGGTACCTGAATGCTAAACTGCCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR TCA 90 bp | TTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCATaGACTGTTAAACTGGTACCAGGTCTGGTTAAGACTGCAGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: LISTRLTDPLITEVS*TVKLVPGLVKTAGL Trigger: TAAGCCTGCAGTCTTAACCAGACCTGGTACCAGTTTAACAGTTCATGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR CCA 90 bp | TTTGAAATGAATATATGCTTGTTTGCTACCAATGTTCACAGCTCATaGTTTTCCCCCATGAACCCACTTCATGTCAATGCAAAGTATTAT | + |
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Preference number: 1 (lower is better) Translates to: FEMNICLFATNVHSS*FSPMNPLHVNAKYY Trigger: ATAATACTTTGCATTGACATGAAGTGGGTTCATGGGGGAAAACCATGAGCTGTGAACATTGGTAGCAAACAAGCATATATTCATTTCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR CAA 90 bp | GCACCCAAAAATGAGTTCCTGAGACTGAAGGTCCTTATTCCCATGTaGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: APKNEFLRLKVLIPM*EHSFSEQFPLVKQT Trigger: TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAATAAGGACCTTCAGTCTCAGGAACTCATTTTTGGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACAAACTGGTACCAGGTCTaGTTAAGACTGCAGGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTNWYQV*LRLQAY Trigger: ATAAGCCTGCAGTCTTAACCAGACCTGGTACCAGTT...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACAAATTCCACTCCTTGCTaGCTAGGTAACAATGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTNSTPC*LGNNEA Trigger: TGCTTCATTGTTACCTAGCCAGCAAGGAGTGGAATT...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATTCACTTAGTGACAGCAGGCATGCTCACTAGAAGAAACATAACTCAGAGGCAAACCAACAATACATaGAGATGTAAGGGAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: IIHLVTAGMLTRRNITQRQTNNT*RCKGRD Trigger: ATCTCTTCCCTTACATCTTCATGTATTGTTGGTTTG...CCTCTGAGTTATGTTTCTTCTAGTGAGCATGCCTGCTGTCACTAAGTGAATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACATGTAACTACAGTGTTTaGTCTTGCTTTTCTAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTCNYSV*SCFSKG Trigger: ACCCTTAGAAAAGCAAGACCAAACACTGTAGTTACA...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTAAATCACATCCAATGTaGATTTGCGTGAATGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SNSINFWVSVSYLQRANTKSHPM*ICVNAR Trigger: CCTTGCATTCACGCAAATTCACATTGGATGTGATTT...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCATTGCAGTTGCTACTTTaGGGATGTTTATTTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: ISTLISTRLTDPLITEVSLQLLL*GCLFVH Trigger: GTGGACAAATAAACATCCTCAAAGTAGCAACTGCAA...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACATTTTATCAACTTGTGTaGTGTAAAAGGATGGCCATT | + |
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Preference number: 2 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTFYQLV*CKRMAI Trigger: AATGGCCATCCTTTTACACCACACAAGTTGATAAAA...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR CAA 90 bp | AACCCACTTCATGTCAATGCAAAGTATTATAAAATAATACCTCCATaGACATATACCCGAAAGATCCAAAGCTCTAGATCTCTAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: NPLHVNAKYYKIIPP*TYTRKIQSSRSLSF Trigger: GAAGCTTAGAGATCTAGAGCTTTGGATCTTTCGGGTATATGTCAATGGAGGTATTATTTTATAATACTTTGCATTGACATGAAGTGGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCACAATGTGAATTTGCGTaGATGCAAGGCATAAAATAC | + |
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Preference number: 2 (lower is better) Translates to: ISTLISTRLTDPLITEVSQCEFA*MQGIKY Trigger: GTATTTTATGCCTTGCATTCACGCAAATTCACATTG...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTGAAAAACAAGTATTATaGGCCTTCCTAAGACAAATG | + |
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Preference number: 2 (lower is better) Translates to: SNSINFWVSVSYLQRANTEKQVL*AFLRQM Trigger: CATTTGTCTTAGGAAGGCCCATAATACTTGTTTTTC...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| 3UTR TCA 72 bp | ACCAGACTAACAGATCCACTCATCACAGAAGTATCATaGACTGTTAAACTGGTACCAGGTCTGGTTAAGACT | + |
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Preference number: 3 (lower is better) Translates to: TRLTDPLITEVS*TVKLVPGLVKT Trigger: AGTCTTAACCAGACCTGGTACCAGTTTAACAGTTCATGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR GCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACAGCGATCCGCGCCGTCTaGGGTGCGCGCGTTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTAIRAV*GARVPG Trigger: TCCCGGAACGCGCGCACCGCAGACGGCGCGGATCGC...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR GCA 90 bp | ATAATTCACTTAGTGACAGCAGGCATGCTCACTAGAAGAAACATAACTCAGAGGATGATCCGCGAGACGTaGAGCCGCACCGGGACGCTC | + |
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Preference number: 4 (lower is better) Translates to: IIHLVTAGMLTRRNITQRMIRET*SRTGTL Trigger: GAGCGTCCCGGTGCGGCTGCACGTCTCGCGGATCAT...CCTCTGAGTTATGTTTCTTCTAGTGAGCATGCCTGCTGTCACTAAGTGAATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCACGAGAAGGCGAACAGTaGGTTCGCCCGCGACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ISTLISTRLTDPLITEVSREGEQ*VRPRQH Trigger: GTGCTGTCGCGGGCGAACTCACTGTTCGCCTTCTCG...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATAATTCACTTAGTGACAGCAGGCATGCTCACTAGAAGAAACATAACTCAGAGGACCTTTCTGCTGGTTTaGAAAACCCATACCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: IIHLVTAGMLTRRNITQRTFLLV*KTHTHR Trigger: CCTGTGGGTATGGGTTTTTCAAACCAGCAGAAAGGT...CCTCTGAGTTATGTTTCTTCTAGTGAGCATGCCTGCTGTCACTAAGTGAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAACCTTTTCTAGAATAGAAAGGGTGTCCAGGGTAACAAAAATATCAGGAAGCCCAGCTATGAATTaGCTGACGAGACCCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: WETFSRIERVSRVTKISGSPAMN*LTRPTK Trigger: TTTGGTGGGTCTCGTCAGCCAATTCATAGCTGGGCT...TCCTGATATTTTTGTTACCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAACCTTTTCTAGAATAGAAAGGGTGTCCAGGGTAACAAAAATATCAGGACATGGTTTTCCCCCATaGACCCACTTCATGTCAATG | + |
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Preference number: 4 (lower is better) Translates to: WETFSRIERVSRVTKISGHGFPP*THFMSM Trigger: CATTGACATGAAGTGGGTTCATGGGGGAAAACCATG...TCCTGATATTTTTGTTACCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACACATTCCTGTTTCCCTTaGGACCATTTCCATCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTHSCFP*DHFHRQ Trigger: TTGACGATGGAAATGGTCTCAAGGGAAACAGGAATG...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATAATTCACTTAGTGACAGCAGGCATGCTCACTAGAAGAAACATAACTCAGAGGAAATCACATCCAATGTaGATTTGCGTGAATGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: IIHLVTAGMLTRRNITQRKSHPM*ICVNAR Trigger: CCTTGCATTCACGCAAATTCACATTGGATGTGATTT...CCTCTGAGTTATGTTTCTTCTAGTGAGCATGCCTGCTGTCACTAAGTGAATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAACCTTTTCTAGAATAGAAAGGGTGTCCAGGGTAACAAAAATATCAGGAAATTCCACTCCTTGCTaGCTAGGTAACAATGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: WETFSRIERVSRVTKISGNSTPC*LGNNEA Trigger: TGCTTCATTGTTACCTAGCCAGCAAGGAGTGGAATT...TCCTGATATTTTTGTTACCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATAATTCACTTAGTGACAGCAGGCATGCTCACTAGAAGAAACATAACTCAGAGGCAATGTGAATTTGCGTaGATGCAAGGCATAAAATAC | + |
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Preference number: 4 (lower is better) Translates to: IIHLVTAGMLTRRNITQRQCEFA*MQGIKY Trigger: GTATTTTATGCCTTGCATTCACGCAAATTCACATTG...CCTCTGAGTTATGTTTCTTCTAGTGAGCATGCCTGCTGTCACTAAGTGAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACATTGCAGTTGCTACTTTaGGGATGTTTATTTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTLQLLL*GCLFVH Trigger: GTGGACAAATAAACATCCTCAAAGTAGCAACTGCAA...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCACCACAGGCTTTTGCATaGACTATACAACTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: ISTLISTRLTDPLITEVSPQAFA*TIQLHT Trigger: TGTGTGGAGTTGTATAGTTCATGCAAAAGCCTGTGG...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCAGCATTCAGGTACCTTTaGCCTTTCTGCTGGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ISTLISTRLTDPLITEVSAFRYL*PFCWFE Trigger: TTCAAACCAGCAGAAAGGTCAAAGGTACCTGAATGC...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACATCCTTATTCCCATGTTaGAGCATTCTTTTTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTSLFPC*SILFLS Trigger: GCTCAGAAAAAGAATGCTCCAACATGGGAATAAGGA...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTAATGTTCACAGCTCATaGTTTTCCCCCATGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: SNSINFWVSVSYLQRANTNVHSS*FSPMNP Trigger: TGGGTTCATGGGGGAAAACCATGAGCTGTGAACATT...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACACAAACCAACAATACATaGAGATGTAAGGGAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTQTNNT*RCKGRD Trigger: ATCTCTTCCCTTACATCTTCATGTATTGTTGGTTTG...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACATTTTCTAAGGGTAACTaGTTTGCAGTTGCTACTTTG | + |
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Preference number: 4 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTFSKGN*FAVATL Trigger: CAAAGTAGCAACTGCAAATCAGTTACCCTTAGAAAA...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACAATCACAGAAGTATCATaGACTGTTAAACTGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTITEVS*TVKLVP Trigger: TGGTACCAGTTTAACAGTTCATGATACTTCTGTGAT...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | ATAATTCACTTAGTGACAGCAGGCATGCTCACTAGAAGAAACATAACTCAGAGGGAAAAACAAGTATTATaGGCCTTCCTAAGACAAATG | + |
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Preference number: 4 (lower is better) Translates to: IIHLVTAGMLTRRNITQREKQVL*AFLRQM Trigger: CATTTGTCTTAGGAAGGCCCATAATACTTGTTTTTC...CCTCTGAGTTATGTTTCTTCTAGTGAGCATGCCTGCTGTCACTAAGTGAATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAACCTTTTCTAGAATAGAAAGGGTGTCCAGGGTAACAAAAATATCAGGAGGAGCATACAGTCTCTaGAGAAGATATTTTAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: WETFSRIERVSRVTKISGGAYSL*RRYFKC Trigger: ACACTTAAAATATCTTCTCCAGAGACTGTATGCTCC...TCCTGATATTTTTGTTACCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTCACTACACTAGGCGCTaGGGAAGATACAAAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: SNSINFWVSVSYLQRANTHYTRR*GRYKDK Trigger: TTTATCTTTGTATCTTCCCCAGCGCCTAGTGTAGTG...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR GCA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTATAAATCTGACAGACTaGCCTCAAAGAGCTTACAGT | + |
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Preference number: 4 (lower is better) Translates to: SNSINFWVSVSYLQRANTINLTD*PQRAYS Trigger: ACTGTAAGCTCTTTGAGGGCAGTCTGTCAGATTTAT...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAACCTTTTCTAGAATAGAAAGGGTGTCCAGGGTAACAAAAATATCAGGATATTTCATATGTATCTaGAAATGGGACAGATACGTG | + |
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Preference number: 4 (lower is better) Translates to: WETFSRIERVSRVTKISGYFICI*KWDRYV Trigger: CACGTATCTGTCCCATTTCCAGATACATATGAAATA...TCCTGATATTTTTGTTACCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTCATGAACTGTTAAACTaGTACCAGGTCTGGTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SNSINFWVSVSYLQRANTHELLN*YQVWLR Trigger: TCTTAACCAGACCTGGTACCAGTTTAACAGTTCATG...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR GCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCATTTAATTCCACTCCTTaGTGGCTAGGTAACAATGAA | + |
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Preference number: 4 (lower is better) Translates to: ISTLISTRLTDPLITEVSFNSTP*WLGNNE Trigger: TTCATTGTTACCTAGCCAGCAAGGAGTGGAATTAAA...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR GCA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTGAATATATGCTTGTTTaGTACCAATGTTCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SNSINFWVSVSYLQRANTEYMLV*YQCSQL Trigger: GAGCTGTGAACATTGGTAGCAAACAAGCATATATTC...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCATTTTATCAACTTGTGTaGTGTAAAAGGATGGCCATT | + |
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Preference number: 4 (lower is better) Translates to: ISTLISTRLTDPLITEVSFYQLV*CKRMAI Trigger: AATGGCCATCCTTTTACACCACACAAGTTGATAAAA...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CCA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCACCACATTGTACTAGTTaGGCATTTTTACTTATCTTC | + |
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Preference number: 4 (lower is better) Translates to: ISTLISTRLTDPLITEVSPHCTS*AFLLIF Trigger: GAAGATAAGTAAAAATGCCCAACTAGTACAATGTGG...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS GCA 90 bp | GAAGCCCGACCCAGAGCGCGGCGGCAGCGCCTGGAGGGCCTCGCATaGGGACCACGAGCGGCACCGGACGCGCGGGAGGCGCCAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: EARPRARRQRLEGLA*GPRAAPDAREAPAQ Trigger: CTGGGCTGGCGCCTCCCGCGCGTCCGGTGCCGCTCGTGGTCCGCATGCGAGGCCCTCCAGGCGCTGCCGCCGCGCTCTGGGTCGGGCTTC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS CCA 90 bp | CAGGAAACCCCACGGAAGCCCGACCCAGAGCGCGGCGGCAGCGCCTaGAGGGCCTCGCATGCGGACCACGAGCGGCACCGGACGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: QETPRKPDPERGGSA*RASHADHERHRTRG Trigger: CCCGCGCGTCCGGTGCCGCTCGTGGTCCGCATGCGAGGCCCTCCAGGCGCTGCCGCCGCGCTCTGGGTCGGGCTTCCGTGGGGTTTCCTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS GCA 90 bp | AGGCGCCAGCCCAGGCGGGCGGCGGCGCCGGCTCTGCTGTTGTGTTaGTCCCTCATTGGCCAGGCGTGGGTGGAGGGAAGTGAGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: RRQPRRAAAPALLLC*SLIGQAWVEGSEEQ Trigger: CTGTTCCTCACTTCCCTCCACCCACGCCTGGCCAATGAGGGAGCAACACAACAGCAGAGCCGGCGCCGCCGCCCGCCTGGGCTGGCGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS TCA 90 bp | GCCGAAGGTGAGCGCCGCCATCACGCTCAGCGAGAAGGCGAACAGTaGGTTCGCCCGCGACAGCACCGTGTTCATCGCGATCGTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: AEGERRHHAQREGEQ*VRPRQHRVHRDRLP Trigger: TGGGAGACGATCGCGATGAACACGGTGCTGTCGCGGGCGAACTCACTGTTCGCCTTCTCGCTGAGCGTGATGGCGGCGCTCACCTTCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503362.2 ENST00000507678.5 ENST00000513139.1 |
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| CDS TCA 90 bp | ACAACTGTAAAGGGAATGTCAAACAGGGCAAACTCGGGTGATGAATaGCACAAAGACAACCCCGTCCTGTGGCCTCCAGAGCCGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TTVKGMSNRANSGDE*HKDNPVLWPPEPPG Trigger: TCCTGGCGGCTCTGGAGGCCACAGGACGGGGTTGTCTTTGTGTCATTCATCACCCGAGTTTGCCCTGTTTGACATTCCCTTTACAGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS-3UTR CAA 90 bp | TGGGAAACCTTTTCTAGAATAGAAAGGGTGTCCAGGGTAACAAAAATATCAGGAGGGACGCTCCTGTCTTaGAAGGCGGTGGTGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: WETFSRIERVSRVTKISGGTLLS*KAVVMK Trigger: CTTCATCACCACCGCCTTCAAAGACAGGAGCGTCCC...TCCTGATATTTTTGTTACCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS GCA 90 bp | AGAAACCCAACAAAACAAAAATCTCGCTGTATCAGAAGGCTAAGATaGTTAATTCTCTCAGTGCCCAACATCTCTGGCCAACTTCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: RNPTKQKSRCIRRLR*LILSVPNISGQLQS Trigger: GCTTTGAAGTTGGCCAGAGATGTTGGGCACTGAGAGAATTAAGCATCTTAGCCTTCTGATACAGCGAGATTTTTGTTTTGTTGGGTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS-3UTR CAA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCAAAGCCCAGCTATGAATaGGCTGACGAGACCCACCAA | + |
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Preference number: 5 (lower is better) Translates to: ISTLISTRLTDPLITEVSKPSYE*ADETHQ Trigger: TTGGTGGGTCTCGTCAGCCAATTCATAGCTGGGCTT...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CAA 90 bp | ATTCCCATGTTGGAGCATTCTTTTTCTGAGCAATTTCCCTTAGTCAAGCAAACACATACCCACAGGCTTTaGCATGAACTATACAACTCC | + |
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Preference number: 5 (lower is better) Translates to: IPMLEHSFSEQFPLVKQTHTHRL*HELYNS Trigger: GGAGTTGTATAGTTCATGCAAAAGCCTGTGGGTATG...TGTTTGCTTGACTAAGGGAAATTGCTCAGAAAAAGAATGCTCCAACATGGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CAA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCAGACCTTTCTGCTGGTTaGAAAAACCCATACCCACAG | + |
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Preference number: 5 (lower is better) Translates to: ISTLISTRLTDPLITEVSDLSAG*KNPYPQ Trigger: CTGTGGGTATGGGTTTTTCAAACCAGCAGAAAGGTC...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CAA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCACCTCTCAAAACAATCTaGTCCCATAGGACAACTTGG | + |
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Preference number: 5 (lower is better) Translates to: ISTLISTRLTDPLITEVSPLKTI*SHRTTW Trigger: CCAAGTTGTCCTATGGGACAAGATTGTTTTGAGAGG...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CAA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTACATTCCTGTTTCCCTaGAGACCATTTCCATCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SNSINFWVSVSYLQRANTTFLFP*RPFPSS Trigger: TGACGATGGAAATGGTCTCAAGGGAAACAGGAATGT...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CAA 90 bp | AGCAATTCAATAAACTTCTGGGTTTCAGTTTCTTATCTGCAAAGAGCTAACACTGTAGAATTCCAGCATTaGGTACGACGTTCCAAGACA | + |
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Preference number: 5 (lower is better) Translates to: SNSINFWVSVSYLQRANTVEFQH*VRRSKT Trigger: TGTCTTGGAACGTCGTACCAAATGCTGGAATTCTAC...AGTGTTAGCTCTTTGCAGATAAGAAACTGAAACCCAGAAGTTTATTGAATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CAA 90 bp | TGGGAAACCTTTTCTAGAATAGAAAGGGTGTCCAGGGTAACAAAAATATCAGGACTTCATCAATATTTATaGGGCGCCTATTATGTGCAA | + |
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Preference number: 5 (lower is better) Translates to: WETFSRIERVSRVTKISGLHQYL*GAYYVQ Trigger: TTGCACATAATAGGCGCCCAATAAATATTGATGAAG...TCCTGATATTTTTGTTACCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS-3UTR CAA 90 bp | ATTTCAACATTAATCTCTACCAGACTAACAGATCCACTCATCACAGAAGTATCATTTGCAGTTGCTACTTaGAGGATGTTTATTTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: ISTLISTRLTDPLITEVSFAVAT*RMFICP Trigger: TGGACAAATAAACATCCTCAAAGTAGCAACTGCAAA...TGATACTTCTGTGATGAGTGGATCTGTTAGTCTGGTAGAGATTAATGTTGAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS GCA 72 bp | CACCCAGGCTCCCGTTCCGGCGGCGGACCGGCTCCCTaGGATCCGCGCCGTCTGCGGTGCGCGCGTTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: HPGSRSGGGPAP*DPRRLRCARSG Trigger: CCCGGAACGCGCGCACCGCAGACGGCGCGGATCGCAGGGAGCCGGTCCGCCGCCGGAACGGGAGCCTGGGTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503362.2 |
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| CDS CAA 72 bp | GCCCAGGCGGGCGGCGGCGCCGGCTCTGCTGTTGTGTaGCTCCCTCATTGGCCAGGCGTGGGTGGAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AQAGGGAGSAVV*LPHWPGVGGGK Trigger: CTTCCCTCCACCCACGCCTGGCCAATGAGGGAGCAACACAACAGCAGAGCCGGCGCCGCCGCCCGCCTGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS GCA 72 bp | CCCAGGCGGGCGGCGGCGCCGGCTCTGCTGTTGTGTTaGTCCCTCATTGGCCAGGCGTGGGTGGAGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: PRRAAAPALLLC*SLIGQAWVEGS Trigger: ACTTCCCTCCACCCACGCCTGGCCAATGAGGGAGCAACACAACAGCAGAGCCGGCGCCGCCGCCCGCCTGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS CAA 90 bp | CCAGGCGGGCGGCGGCGCCGGCTCTGCTGTTGTGTTGCTCCCTCATaGGCCAGGCGTGGGTGGAGGGAAGTGAGGAACAGGAAGCAAGCG | + |
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Preference number: 6 (lower is better) Translates to: PGGRRRRLCCCVAPS*ARRGWREVRNRKQA Trigger: CGCTTGCTTCCTGTTCCTCACTTCCCTCCACCCACGCCTGGCCAATGAGGGAGCAACACAACAGCAGAGCCGGCGCCGCCGCCCGCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS CAA 72 bp | CGCGAGACGTGCAGCCGCACCGGGACGCTCCTGTCTTaGAAGGCGGTGGTGATGAAGCAGCCGAAGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RETCSRTGTLLS*KAVVMKQPKVS Trigger: GCTCACCTTCGGCTGCTTCATCACCACCGCCTTCAAAGACAGGAGCGTCCCGGTGCGGCTGCACGTCTCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503362.2 ENST00000507678.5 ENST00000513139.1 |
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| CDS TCA 72 bp | GAGCGCCGCCATCACGCTCAGCGAGAAGGCGAACAGTaGGTTCGCCCGCGACAGCACCGTGTTCATCGCGAT | + |
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Preference number: 6 (lower is better) Translates to: ERRHHAQREGEQ*VRPRQHRVHRD Trigger: ATCGCGATGAACACGGTGCTGTCGCGGGCGAACTCACTGTTCGCCTTCTCGCTGAGCGTGATGGCGGCGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503362.2 ENST00000507678.5 ENST00000513139.1 |
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| CDS CCA 72 bp | GCTAAGATGCTTAATTCTCTCAGTGCCCAACATCTCTaGCCAACTTCAAAGCAGCTCCAACTGTTTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: AKMLNSLSAQHL*PTSKQLQLFTA Trigger: GGCAGTAAACAGTTGGAGCTGCTTTGAAGTTGGCCAGAGATGTTGGGCACTGAGAGAATTAAGCATCTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS CAA 72 bp | AGCAGCAGCTTCGGATTATCACCTCTCAAAACAATCTaGTCCCATAGGACAACTTGGTTCAGAGCCTATATT | + |
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Preference number: 6 (lower is better) Translates to: SSSFGLSPLKTI*SHRTTWFRAYI Trigger: AATATAGGCTCTGAACCAAGTTGTCCTATGGGACAAGATTGTTTTGAGAGGTGATAATCCGAAGCTGCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507001.1 |
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| CDS CAA 72 bp | ATAGCGAAATGGCACTGTCATTTCGAACTGCATTTTTaGGCGTTTTCGCAGACTTCTTCAAGTGGTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: IAKWHCHFELHF*AFSQTSSSGWQ Trigger: TTGCCAACCACTTGAAGAAGTCTGCGAAAACGCCAAAAAATGCAGTTCGAAATGACAGTGCCATTTCGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS TCA 72 bp | GGTGATACGAATACTAACAGATGGCATATTAAAGGGTaGTACAGTAATCACCCCCTTATCCGAGGTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: GDTNTNRWHIKG*YSNHPLIRGFT Trigger: AGTGAAACCTCGGATAAGGGGGTGATTACTGTATCACCCTTTAATATGCCATCTGTTAGTATTCGTATCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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| CDS CAA 72 bp | AGCAGCAGCTTCGGATTATCACCTCTCAAAACAATCTaGTCCCATAGGACAACTTGGTTCAGAGCATTATTT | + |
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Preference number: 6 (lower is better) Translates to: SSSFGLSPLKTI*SHRTTWFRALF Trigger: AAATAATGCTCTGAACCAAGTTGTCCTATGGGACAAGATTGTTTTGAGAGGTGATAATCCGAAGCTGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503362.2 ENST00000507678.5 ENST00000513139.1 |
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| CDS TCA 72 bp | AGCAATTTTGCAGAATGGGTAGAAGAAAGCTACACATaGCTACAAGGTGATACGAATACTAACAGATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SNFAEWVEESYT*LQGDTNTNRWH Trigger: ATGCCATCTGTTAGTATTCGTATCACCTTGTAGTCATGTGTAGCTTTCTTCTACCCATTCTGCAAAATTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507678.5 |
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