Pregenerated sensors for SPCS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000118363Ensembl transcript IDs: ENST00000263672.11, ENST00000526883.1, ENST00000610881.4
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGTAAAGAAAAAGGCACAGTGGGGGAACTCTAAGGGATCATCATaGAGAGGGTTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTG | + |
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Preference number: 1 (lower is better) Translates to: HVKKKAQWGNSKGSS*RGLFSLYLQASRPL Trigger: CAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAACCCTCTCCATGATGATCCCTTAGAGTTCCCCCACTGTGCCTTTTTCTTTACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR CCA 90 bp | TGTGGAGACACATGTTTGCATGCACATGTAAAGAAAAAGGCACAGTaGGGGAACTCTAAGGGATCATCATGGAGAGGGTTATTCAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: CGDTCLHAHVKKKAQ*GNSKGSSWRGLFSL Trigger: GAGACTGAATAACCCTCTCCATGATGATCCCTTAGAGTTCCCCCACTGTGCCTTTTTCTTTACATGTGCATGCAAACATGTGTCTCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGCGGACTCCCCAGGTTTaGATCCCAGTTCTATCACTA | + |
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Preference number: 2 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMRTPQV*IPVLSL Trigger: TAGTGATAGAACTGGGATTCAAACCTGGGGAGTCCG...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGCACCCAGGTCTTCTCTaGCCATACTGGGAAAATACT | + |
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Preference number: 2 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMHPGLL*PYWENT Trigger: AGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTG...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR GCA 90 bp | GGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGAAAATACTGGAAACGGCTGTTTTGTCTCTaGAGGACCACAAACTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: GSWQAPRSSLTILGKYWKRLFCL*RTTNSE Trigger: TTCAGAGTTTGTGGTCCTGCAGAGACAAAACAGCCG...TTTCCAGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CCA 90 bp | CCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGTACTTGGAGCATTTCTaGCACAAAGTAAGTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: PKGQRILASTQVFSDHTGYLEHF*HKVSTE Trigger: TTCTGTACTTACTTTGTGCCAGAAATGCTCCAAGTA...CCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGCAATTCCCTACCATGTaGTGCGAGATAGGACAACCT | + |
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Preference number: 2 (lower is better) Translates to: LFSLYLQASRPLCLTVQLQFPTM*CEIGQP Trigger: AGGTTGTCCTATCTCGCACCACATGGTAGGGAATTG...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR CAA 90 bp | GGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTaGTTCACAATTCCCTACCATGTGGTGCGAGATAGGACAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: GMKSTESKALTFCPV*FTIPYHVVRDRTTS Trigger: AGAGGTTGTCCTATCTCGCACCACATGGTAGGGAATTGTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACCGGACTCCCCAGGTTTaGATCCCAGTTCTATCACTA | + |
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Preference number: 2 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHRTPQV*IPVLSL Trigger: TAGTGATAGAACTGGGATTCAAACCTGGGGAGTCCG...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR TCA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGCAAGGTTTACAGGAATaGAGAGTACAGAATCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LFSLYLQASRPLCLTVQLQGLQE*RVQNPR Trigger: CCTTGGATTCTGTACTCTTCATTCCTGTAAACCTTG...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACAAGGTCAAAGGATCTTaGCAAGCACCCAGGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHKVKGS*QAPRSS Trigger: AGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTT...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAATATTCCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACTACTTGGAGCATTTCTaGCACAAAGTAAGTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: GNIPKGQRILASTQVFSDYLEHF*HKVSTE Trigger: TTCTGTACTTACTTTGTGCCAGAAATGCTCCAAGTA...GTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGGAATATTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGGTGATTAAAAGTATATaGGAGGATGTGTGTAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LFSLYLQASRPLCLTVQLVIKSI*EDVCRL Trigger: TAACCTACACACATCCTCCCATATACTTTTAATCAC...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACCTCTTAGGATTGCTGTaGGCATTATTAACACATGTA | + |
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Preference number: 2 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHLLGLL*ALLTHV Trigger: TACATGTGTTAATAATGCTCACAGCAATCCTAAGAG...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR TCA 90 bp | TACAGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCTCTTAGGATTGCTGTaGGCATTATTAACACATGTA | + |
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Preference number: 2 (lower is better) Translates to: YRNEEYRIQGFNFLSSVVLLGLL*ALLTHV Trigger: TACATGTGTTAATAATGCTCACAGCAATCCTAAGAG...AACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CAA 90 bp | GGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGAAAATACTGGAAACCGGACTCCCCAGGTTaGAATCCCAGTTCTATCACT | + |
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Preference number: 3 (lower is better) Translates to: GSWQAPRSSLTILGKYWKPDSPG*NPSSIT Trigger: AGTGATAGAACTGGGATTCAAACCTGGGGAGTCCGG...TTTCCAGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGCCGGACTCCCCAGGTTaGAATCCCAGTTCTATCACT | + |
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Preference number: 3 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMPDSPG*NPSSIT Trigger: AGTGATAGAACTGGGATTCAAACCTGGGGAGTCCGG...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR CCA 72 bp | GGCTGTAGGGAAATATTCCTAAAGGTCAAAGGATCTTaGCAAGCACCCAGGTCTTCTCTGACCATACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GCREIFLKVKGS*QAPRSSLTILG Trigger: TCCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGGAATATTTCCCTACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR CCA 72 bp | AAAAAGGCACAGTGGGGGAACTCTAAGGGATCATCATaGAGAGGGTTATTCAGTCTCTATCTGCAAGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: KKAQWGNSKGSS*RGLFSLYLQAS Trigger: CGAGGCTTGCAGATAGAGACTGAATAACCCTCTCCATGATGATCCCTTAGAGTTCCCCCACTGTGCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR GCA 72 bp | TCTGTCCAGTGTTGTTCACAATTCCCTACCATGTGGTaGGAGATAGGACAACCTCTCCAAGACAAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SVQCCSQFPTMW*EIGQPLQDKQE Trigger: TTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAATTGTGAACAACACTGGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR CCA 72 bp | ATAAGGGACTTGAGCATCCTTGGATTTTGGTATGCTTaGGGATCCTGGAACCAATCTCCCACAAATACCAAG | + |
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Preference number: 3 (lower is better) Translates to: IRDLSILGFWYA*GSWNQSPTNTK Trigger: CTTGGTATTTGTGGGAGATTGGTTCCAGGATCCCCAAGCATACCAAAATCCAAGGATGCTCAAGTCCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CAA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGAAACTGAATATAGTGTaGGGTACTAGGCTCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LFSLYLQASRPLCLTVQLKLNIV*GTRLSQ Trigger: TTGGCTGAGCCTAGTACCCAACACTATATTCAGTTT...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR-3UTR CAA 90 bp | TACAGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTAAACTGAATATAGTGTaGGGTACTAGGCTCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: YRNEEYRIQGFNFLSSVVKLNIV*GTRLSQ Trigger: TTGGCTGAGCCTAGTACCCAACACTATATTCAGTTT...AACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR TCA 90 bp | CCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGCGGACTCCCCAGGTTTaGATCCCAGTTCTATCACTA | + |
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Preference number: 4 (lower is better) Translates to: PKGQRILASTQVFSDHTGRTPQV*IPVLSL Trigger: TAGTGATAGAACTGGGATTCAAACCTGGGGAGTCCG...CCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR TCA 90 bp | CCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGCACCCAGGTCTTCTCTaGCCATACTGGGAAAATACT | + |
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Preference number: 4 (lower is better) Translates to: PKGQRILASTQVFSDHTGHPGLL*PYWENT Trigger: AGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTG...CCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | GGCTGTTTTGTCTCTGCAGGACCACAAACTCTGAAGCCGGACTCCCCAGGTTTGTCTAAGGGATCATCATaGAGAGGGTTATTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GCFVSAGPQTLKPDSPGLSKGSS*RGLFSL Trigger: GAGACTGAATAACCCTCTCCATGATGATCCCTTAGA...CAAACCTGGGGAGTCCGGCTTCAGAGTTTGTGGTCCTGCAGAGACAAAACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR GCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGTTCCCTACCATGTGGTaGGAGATAGGACAACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMFPTMW*EIGQPL Trigger: GAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR GCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGCGGCTGTTTTGTCTCTaGAGGACCACAAACTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMRLFCL*RTTNSE Trigger: TTCAGAGTTTGTGGTCCTGCAGAGACAAAACAGCCG...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR GCA 90 bp | GGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGAAAATACTGGAAACCTTGGATTTTGGTATaGTTGGGGATCCTGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: GSWQAPRSSLTILGKYWKPWILV*LGILEP Trigger: TGGTTCCAGGATCCCCAAGCATACCAAAATCCAAGG...TTTCCAGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | GGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGAAAATACTGGAAAGGACTTGAGCATCCTTaGATTTTGGTATGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GSWQAPRSSLTILGKYWKGLEHP*ILVCLG Trigger: CCCCAAGCATACCAAAATCCAAGGATGCTCAAGTCC...TTTCCAGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR TCA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGCGGACTCCCCAGGTTTaGATCCCAGTTCTATCACTA | + |
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Preference number: 4 (lower is better) Translates to: LFSLYLQASRPLCLTVQLRTPQV*IPVLSL Trigger: TAGTGATAGAACTGGGATTCAAACCTGGGGAGTCCG...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | GGAAATATTCCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACAAGGTCAAAGGATCTTaGCAAGCACCCAGGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GNIPKGQRILASTQVFSDKVKGS*QAPRSS Trigger: AGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTT...GTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGGAATATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGTATGCTTGGGGATCCTaGAACCAATCTCCCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMYAWGS*NQSPTN Trigger: ATTTGTGGGAGATTGGTTCCAGGATCCCCAAGCATA...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR TCA 90 bp | GGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGAAAATACTGGAAACAAGGTTTACAGGAATaGAGAGTACAGAATCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: GSWQAPRSSLTILGKYWKQGLQE*RVQNPR Trigger: CCTTGGATTCTGTACTCTTCATTCCTGTAAACCTTG...TTTCCAGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR TCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGCAAGGTTTACAGGAATaGAGAGTACAGAATCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMQGLQE*RVQNPR Trigger: CCTTGGATTCTGTACTCTTCATTCCTGTAAACCTTG...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR GCA 90 bp | GGAAATATTCCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACTATTCAGTCTCTATCTaGAAGCCTCGAGACCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GNIPKGQRILASTQVFSDYSVSI*KPRDPC Trigger: ACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATA...GTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGGAATATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | GGAAATATTCCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACGGATTTTGGTATGCTTaGGGATCCTGGAACCAATCT | + |
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Preference number: 4 (lower is better) Translates to: GNIPKGQRILASTQVFSDGFWYA*GSWNQS Trigger: AGATTGGTTCCAGGATCCCCAAGCATACCAAAATCC...GTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGGAATATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGGGACTTGAGCATCCTTaGATTTTGGTATGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LFSLYLQASRPLCLTVQLGLEHP*ILVCLG Trigger: CCCCAAGCATACCAAAATCCAAGGATGCTCAAGTCC...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGTCTAAGGGATCATCATaGAGAGGGTTATTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMSKGSS*RGLFSL Trigger: GAGACTGAATAACCCTCTCCATGATGATCCCTTAGA...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR GCA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGTATTCAGTCTCTATCTaGAAGCCTCGAGACCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LFSLYLQASRPLCLTVQLYSVSI*KPRDPC Trigger: ACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATA...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR CAA 72 bp | AGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTaGTTCACAATTCCCTACCATGTGGTGCGAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: STESKALTFCPV*FTIPYHVVRDR Trigger: CCTATCTCGCACCACATGGTAGGGAATTGTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| 3UTR CAA 72 bp | TATAAGGGACTTGAGCATCCTTGGATTTTGGTATGCTaGGGGATCCTGGAACCAATCTCCCACAAATACCAA | + |
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Preference number: 4 (lower is better) Translates to: YKGLEHPWILVC*GILEPISHKYQ Trigger: TTGGTATTTGTGGGAGATTGGTTCCAGGATCCCCAAGCATACCAAAATCCAAGGATGCTCAAGTCCCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR TCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGCTCTTAGGATTGCTGTaGGCATTATTAACACATGTA | + |
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Preference number: 4 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMLLGLL*ALLTHV Trigger: TACATGTGTTAATAATGCTCACAGCAATCCTAAGAG...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR GCA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACCCTTGGATTTTGGTATaGTTGGGGATCCTGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHPWILV*LGILEP Trigger: TGGTTCCAGGATCCCCAAGCATACCAAAATCCAAGG...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | GGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGAAAATACTGGAAATACTTGGAGCATTTCTaGCACAAAGTAAGTACAGAA | + |
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Preference number: 4 (lower is better) Translates to: GSWQAPRSSLTILGKYWKYLEHF*HKVSTE Trigger: TTCTGTACTTACTTTGTGCCAGAAATGCTCCAAGTA...TTTCCAGTATTTTCCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACCAATTCCCTACCATGTaGTGCGAGATAGGACAACCT | + |
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Preference number: 4 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHQFPTM*CEIGQP Trigger: AGGTTGTCCTATCTCGCACCACATGGTAGGGAATTG...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR TCA 90 bp | GGAAATATTCCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACCTCTTAGGATTGCTGTaGGCATTATTAACACATGTA | + |
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Preference number: 4 (lower is better) Translates to: GNIPKGQRILASTQVFSDLLGLL*ALLTHV Trigger: TACATGTGTTAATAATGCTCACAGCAATCCTAAGAG...GTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGGAATATTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR GCA 90 bp | TACAGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCGGCTGTTTTGTCTCTaGAGGACCACAAACTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: YRNEEYRIQGFNFLSSVVRLFCL*RTTNSE Trigger: TTCAGAGTTTGTGGTCCTGCAGAGACAAAACAGCCG...AACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACTATGCTTGGGGATCCTaGAACCAATCTCCCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHYAWGS*NQSPTN Trigger: ATTTGTGGGAGATTGGTTCCAGGATCCCCAAGCATA...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGGTGATTAAAAGTATATaGGAGGATGTGTGTAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMVIKSI*EDVCRL Trigger: TAACCTACACACATCCTCCCATATACTTTTAATCAC...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTGGATTTTGGTATGCTTaGGGATCCTGGAACCAATCT | + |
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Preference number: 4 (lower is better) Translates to: YRNEEYRIQGFNFLSSVVGFWYA*GSWNQS Trigger: AGATTGGTTCCAGGATCCCCAAGCATACCAAAATCC...AACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CCA 90 bp | TACAGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTGTGATTAAAAGTATATaGGAGGATGTGTGTAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: YRNEEYRIQGFNFLSSVVVIKSI*EDVCRL Trigger: TAACCTACACACATCCTCCCATATACTTTTAATCAC...AACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | GGCTGTTTTGTCTCTGCAGGACCACAAACTCTGAAGCCGGACTCCCCAGGTTTGGGAAAAGCGGCTGTTTaGTCTCTGCAGGACCACAAA | + |
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Preference number: 5 (lower is better) Translates to: GCFVSAGPQTLKPDSPGLGKAAV*SLQDHK Trigger: TTTGTGGTCCTGCAGAGACAAAACAGCCGCTTTTCC...CAAACCTGGGGAGTCCGGCTTCAGAGTTTGTGGTCCTGCAGAGACAAAACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | GGCTGTTTTGTCTCTGCAGGACCACAAACTCTGAAGCCGGACTCCCCAGGTTTGCAAGCCTCGAGACCCTaGTGTCTAACAGTACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GCFVSAGPQTLKPDSPGLQASRP*CLTVQL Trigger: CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTG...CAAACCTGGGGAGTCCGGCTTCAGAGTTTGTGGTCCTGCAGAGACAAAACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | CCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGAAAGGTCAAAGGATCTaGGCAAGCACCCAGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PKGQRILASTQVFSDHTGKGQRI*ASTQVF Trigger: GAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTT...CCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | GGCTGTTTTGTCTCTGCAGGACCACAAACTCTGAAGCCGGACTCCCCAGGTTTGAAACTGAATATAGTGTaGGGTACTAGGCTCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: GCFVSAGPQTLKPDSPGLKLNIV*GTRLSQ Trigger: TTGGCTGAGCCTAGTACCCAACACTATATTCAGTTT...CAAACCTGGGGAGTCCGGCTTCAGAGTTTGTGGTCCTGCAGAGACAAAACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGCCGGACTCCCCAGGTTaGAATCCCAGTTCTATCACT | + |
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Preference number: 5 (lower is better) Translates to: LFSLYLQASRPLCLTVQLPDSPG*NPSSIT Trigger: AGTGATAGAACTGGGATTCAAACCTGGGGAGTCCGG...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | TTCCCTACCATGTGGTGCGAGATAGGACAACCTCTCCAAGACAAACAGGAAATGTGGATTTTGGTATGCTaGGGGATCCTGGAACCAATC | + |
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Preference number: 5 (lower is better) Translates to: FPTMWCEIGQPLQDKQEMWILVC*GILEPI Trigger: GATTGGTTCCAGGATCCCCAAGCATACCAAAATCCA...CATTTCCTGTTTGTCTTGGAGAGGTTGTCCTATCTCGCACCACATGGTAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | CCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGTGTCTAACAGTACAGTaGGCCCTCTATATCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: PKGQRILASTQVFSDHTGCLTVQ*ALYIYR Trigger: TCTGTAGATATAGAGGGCCAACTGTACTGTTAGACA...CCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | CCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACCATACTGGGTGTGGAGACACATGTTaGCATGCACATGTAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PKGQRILASTQVFSDHTGCGDTC*HAHVKK Trigger: TTTCTTTACATGTGCATGCAAACATGTGTCTCCACA...CCCAGTATGGTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCCGGACTCCCCAGGTTaGAATCCCAGTTCTATCACT | + |
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Preference number: 5 (lower is better) Translates to: YRNEEYRIQGFNFLSSVVPDSPG*NPSSIT Trigger: AGTGATAGAACTGGGATTCAAACCTGGGGAGTCCGG...AACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACGGAAAAGCGGCTGTTTaGTCTCTGCAGGACCACAAA | + |
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Preference number: 5 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHGKAAV*SLQDHK Trigger: TTTGTGGTCCTGCAGAGACAAAACAGCCGCTTTTCC...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | GGAAATATTCCTAAAGGTCAAAGGATCTTGGCAAGCACCCAGGTCTTCTCTGACAAACTGAATATAGTGTaGGGTACTAGGCTCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: GNIPKGQRILASTQVFSDKLNIV*GTRLSQ Trigger: TTGGCTGAGCCTAGTACCCAACACTATATTCAGTTT...GTCAGAGAAGACCTGGGTGCTTGCCAAGATCCTTTGACCTTTAGGAATATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | AGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTCACCAAGCCTCGAGACCCTaGTGTCTAACAGTACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: RNEEYRIQGFNFLSSVVHQASRP*CLTVQL Trigger: CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTG...GTGAACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | TTATTCAGTCTCTATCTGCAAGCCTCGAGACCCTTGTGTCTAACAGTACAGTTGTGTCTAACAGTACAGTaGGCCCTCTATATCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: LFSLYLQASRPLCLTVQLCLTVQ*ALYIYR Trigger: TCTGTAGATATAGAGGGCCAACTGTACTGTTAGACA...CAACTGTACTGTTAGACACAAGGGTCTCGAGGCTTGCAGATAGAGACTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS-3UTR CAA 90 bp | TACAGGAATGAAGAGTACAGAATCCAAGGCTTTAACTTTCTGTCCAGTGTTGTTTGGATTTTGGTATGCTaGGGGATCCTGGAACCAATC | + |
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Preference number: 5 (lower is better) Translates to: YRNEEYRIQGFNFLSSVVWILVC*GILEPI Trigger: GATTGGTTCCAGGATCCCCAAGCATACCAAAATCCA...AACAACACTGGACAGAAAGTTAAAGCCTTGGATTCTGTACTCTTCATTCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263672.11 ENST00000610881.4 |
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| CDS TCA 72 bp | AAAAGAAGAAGTTCTAAAGAGGACCGGGTCCAGGTTTaGAGTGTGATGAGGGCAAGGGCAGGCTCCAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: KRRSSKEDRVQV*SVMRARAGSKR Trigger: ACGCTTGGAGCCTGCCCTTGCCCTCATCACACTTCAAACCTGGACCCGGTCCTCTTTAGAACTTCTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526883.1 |
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