Pregenerated sensors for SPC25 (Homo sapiens)
Ensembl gene IDs: ENSG00000152253, ENSG00000277909Ensembl transcript IDs: ENST00000282074.7, ENST00000472216.2, ENST00000479309.6, ENST00000611144.4, ENST00000612084.4, ENST00000615149.1, ENST00000616584.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGGTGGGAATTGAACAATaGGAACACATGGACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLVGIEQ*EHMDTG Trigger: TCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCAC...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| 3UTR-3UTR CCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGTCCTTTGTAGGAACATaGATGAAGCTGGAAACCATC | + |
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Preference number: 2 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLSFVGT*MKLETI Trigger: GATGGTTTCCAGCTTCATCCATGTTCCTACAAAGGA...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| 3UTR-3UTR CCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGATTCTCACTCCTAGGTaGGAATTGAACAATGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLILTPR*ELNNEN Trigger: GTTCTCATTGTTCAATTCCCACCTAGGAGTGAGAAT...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| 3UTR-3UTR CAA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGACACAACGGGGACTGTaGTGGGTTGGGGGAGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLTQRGL*WVGGAG Trigger: CCCCGCTCCCCCAACCCACAACAGTCCCCGTTGTGT...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616584.1 |
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| 3UTR-3UTR CAA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGACTCCTAGGTGGGAATaGAACAATGAGAACACATGG | + |
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Preference number: 3 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLTPRWE*NNENTW Trigger: CCATGTGTTCTCATTGTTCAATTCCCACCTAGGAGT...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGCTTCGCAGGCAGGCCTaGGTCCCGCCGCCTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLLRRQA*VPPPSP Trigger: TGGGGAAGGCGGCGGGACTCAGGCCTGCCTGCGAAG...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGCTTAGTCCCGCCATCTaGCAGGAGGTGTCCGTACTT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLLSPAI*QEVSVL Trigger: AAGTACGGACACCTCCTGTCAGATGGCGGGACTAAG...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGGCTAGGCCCTCAAGATaGGGGGCACTATCTGACACT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLARPSR*GALSDT Trigger: AGTGTCAGATAGTGCCCCTCATCTTGAGGGCCTAGC...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGATGAGGGGCACTATCTaGCACTTCATAGTCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLMRGTI*HFIVPC Trigger: GCAAGGGACTATGAAGTGTCAGATAGTGCCCCTCAT...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGTTCCTTACATTCTCTTaGAATTCTGCTAGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLFLTFS*NSARPS Trigger: TGAGGGCCTAGCAGAATTTCAAGAGAATGTAAGGAA...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR GCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGGCTTTTATCGAAAAGTaGCAGTTCGTCCTCTACCAT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLAFIEK*QFVLYH Trigger: ATGGTAGAGGACGAACTGGCACTTTTCGATAAAAGC...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR GCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGAAGTCTGCAGATTTCTaGAGCCTTTTCAACCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLKSADF*SLFNLS Trigger: AGAGAGGTTGAAAAGGCTGCAGAAATCTGCAGACTT...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR GCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGCACAGACAGCTTTTCTaGAAATGCTTTGATGGAATC | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLHRQLF*KCFDGI Trigger: GATTCCATCAAAGCATTTGCAGAAAAGCTGTCTGTG...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR GCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGCCTTTTCAACCTCTCTaGATTCGCTTTATTAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLPFQPL*IRFISS Trigger: ACTGCTAATAAAGCGAATGCAGAGAGGTTGAAAAGG...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGTTTCTGCAAATGCTTTaGTGGAATCCTTGTAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLFLQML*WNPCRY Trigger: ATACCTACAAGGATTCCATCAAAGCATTTGCAGAAA...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGGCTTATTTTGCCTGCTaGTCTGATTTTGATATTCCA | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLAYFAC*SDFDIP Trigger: TGGAATATCAAAATCAGATCAGCAGGCAAAATAAGC...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR GCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGAAGATCCTGGATATTTaGAGTCAGTACTTCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLKILDI*SQYFQF Trigger: GAATTGGAAGTACTGACTGCAAATATCCAGGATCTT...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR CCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGTCTTCCTTAAGATCCTaGATATTTGCAGTCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLSSLRS*IFAVST Trigger: AGTACTGACTGCAAATATCCAGGATCTTAAGGAAGA...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS-3UTR GCA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGATCTTTATACAAGTCTaGAGATTTCTGCAGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLIFIQV*RFLQPF Trigger: AAAAGGCTGCAGAAATCTGCAGACTTGTATAAAGAT...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS GCA 90 bp | ATTCAGGCTTTGTCTGATGAACAGCATGGACCGGATTGTCATCTGTaGTCATACATCCTGCTGCTAATAGAAGATGGGCACTATCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: IQALSDEQHGPDCHL*SYILLLIEDGHYLP Trigger: TGGAAGATAGTGCCCATCTTCTATTAGCAGCAGGATGTATGAGCACAGATGACAATCCGGTCCATGCTGTTCATCAGACAAAGCCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000472216.2 ENST00000615149.1 |
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| CDS GCA 90 bp | CGAATTTCTAGTCCAAGTCGATCTTTATACAAGTCTGCAGATTTCTaGAGCCTTTTCAACCTCTCTGCATTCGCTTTATTAGCAGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: RISSPSRSLYKSADF*SLFNLSAFALLAVE Trigger: TTCTACTGCTAATAAAGCGAATGCAGAGAGGTTGAAAAGGCTGCAGAAATCTGCAGACTTGTATAAAGATCGACTTGGACTAGAAATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000282074.7 ENST00000479309.6 ENST00000611144.4 ENST00000612084.4 ENST00000616584.1 |
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| CDS-3UTR CAA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGCCTGCTGATCTGATTTaGATATTCCAGAAACATCTC | + |
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Preference number: 5 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLPADLI*IFQKHL Trigger: GAGATGTTTCTGGAATATCAAAATCAGATCAGCAGG...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS GCA 90 bp | ATCTTTATACAAGTCTGCAGATTTCTGCAGCCTTTTCAACCTCTCTaGATTCGCTTTATTAGCAGTAGAAATAGTTTCCTTCTTCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: IFIQVCRFLQPFQPL*IRFISSRNSFLLPR Trigger: TCTAGGAAGAAGGAAACTATTTCTACTGCTAATAAAGCGAATGCAGAGAGGTTGAAAAGGCTGCAGAAATCTGCAGACTTGTATAAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000282074.7 ENST00000479309.6 ENST00000611144.4 ENST00000612084.4 ENST00000616584.1 |
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| CDS-3UTR CAA 90 bp | AGACACATGCACACGTATGTTTATTTCGGCACTATTCACAATAGCAAAGACTTGTTGAATGAGCTTATTTaGCCTGCTGATCTGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: RHMHTYVYFGTIHNSKDLLNELI*PADLIL Trigger: CAAAATCAGATCAGCAGGCAAAATAAGCTCATTCAA...CAAGTCTTTGCTATTGTGAATAGTGCCGAAATAAACATACGTGTGCATGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000282074.7 ENST00000616584.1 |
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| CDS GCA 72 bp | TTGTCTGATGAACAGCATGGACCGGATTGTCATCTGTaGTCATACATCCTGCTGCTAATAGAAGATGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LSDEQHGPDCHL*SYILLLIEDGH Trigger: GTGCCCATCTTCTATTAGCAGCAGGATGTATGAGCACAGATGACAATCCGGTCCATGCTGTTCATCAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000472216.2 ENST00000615149.1 |
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| CDS CAA 72 bp | CTGTTCAAAGAGTTGGCTTTTTCCAGGATTCAGGCTTaGTCTGATGAACAGCATGGACCGGATTGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LFKELAFSRIQA*SDEQHGPDCHL Trigger: CAGATGACAATCCGGTCCATGCTGTTCATCAGACAAAGCCTGAATCCTGGAAAAAGCCAACTCTTTGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000472216.2 ENST00000615149.1 |
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| CDS GCA 72 bp | AGTCCAAGTCGATCTTTATACAAGTCTGCAGATTTCTaGAGCCTTTTCAACCTCTCTGCATTCGCTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: SPSRSLYKSADF*SLFNLSAFALL Trigger: TAATAAAGCGAATGCAGAGAGGTTGAAAAGGCTGCAGAAATCTGCAGACTTGTATAAAGATCGACTTGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000282074.7 ENST00000479309.6 ENST00000611144.4 ENST00000612084.4 ENST00000616584.1 |
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| CDS TCA 72 bp | GGTGGTCAATGTAAGGCATTTAGCACAGTACGATTTTaGTATTCCAGAAACATCTCAACCATTCGTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGQCKAFSTVRF*YSRNISTIRSS Trigger: AGAAGAACGAATGGTTGAGATGTTTCTGGAATATCAAAATCGTACTGTGCTAAATGCCTTACATTGACCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472216.2 ENST00000615149.1 |
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| CDS CCA 72 bp | GTTTCCTTCTTCCTAGAATATTCTTCCTTAAGATCCTaGATATTTGCAGTCAGTACTTCCAATTCCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VSFFLEYSSLRS*IFAVSTSNSCF Trigger: AAAGCAGGAATTGGAAGTACTGACTGCAAATATCCAGGATCTTAAGGAAGAATATTCTAGGAAGAAGGAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000282074.7 ENST00000479309.6 ENST00000611144.4 ENST00000612084.4 ENST00000616584.1 |
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