RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPATS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000249481

Ensembl transcript IDs: ENST00000288390.2, ENST00000323108.12, ENST00000506468.1, ENST00000515220.5, ENST00000674044.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGGGTCACTGCAAGCTCCGCCTCCCAGGTTGACACCATTCTCCTaGCTCAGCCTCCCGAGTATAGTACAGTCCTGGGACTATAGGTGC +
Preference number: 1 (lower is better)
Translates to: LGSLQAPPPRLTPFS*LSLPSIVQSWDYRC
Trigger: GCACCTATAGTCCCAGGACTGTACTATACTCGGGAGGCTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAGTGACCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CCA 90 bp CATATGAGGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTaGCCCTCAGCAGACACTGAACCTGCCAGCACCCTGCGCTTGGAC +
Preference number: 1 (lower is better)
Translates to: HMRTQQEGTIYEPEG*PSADTEPASTLRLD
Trigger: GTCCAAGCGCAGGGTGCTGGCAGGTTCAGTGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCCTCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CCA 90 bp GGATGTATGCTGATGTTAACCCAAGGAGTGGTCAGGCACAGCAGCTaGCAGTCGGCACCATGCTCTCTGCCAGTTAGTCTAGAGGCACAT +
Preference number: 1 (lower is better)
Translates to: GCMLMLTQGVVRHSS*QSAPCSLPVSLEAH
Trigger: ATGTGCCTCTAGACTAACTGGCAGAGAGCATGGTGCCGACTGCCAGCTGCTGTGCCTGACCACTCCTTGGGTTAACATCAGCATACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CCA 90 bp CCAAAGTTGGCAGTGGAACTCTACCTGACAGCTATTGAGGTGCCGTaGAATAAGGCCTGGGCATCGAGATGTACCCACAGAGAACACCAG +
Preference number: 1 (lower is better)
Translates to: PKLAVELYLTAIEVP*NKAWASRCTHREHQ
Trigger: CTGGTGTTCTCTGTGGGTACATCTCGATGCCCAGGCCTTATTCCACGGCACCTCAATAGCTGTCAGGTAGAGTTCCACTGCCAACTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR TCA 90 bp GAGGCCAGGAGGCTCACTGACACTTGGGCCTGTTTCCACAGAAGATaGGGAACTGACACTTTTGCCAGAGGGTGTTGTGTTGGCAAAACA +
Preference number: 1 (lower is better)
Translates to: EARRLTDTWACFHRR*GTDTFARGCCVGKT
Trigger: TGTTTTGCCAACACAACACCCTCTGGCAAAAGTGTCAGTTCCTCATCTTCTGTGGAAACAGGCCCAAGTGTCAGTGAGCCTCCTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CCA 90 bp GTGGAACTCTACCTGACAGCTATTGAGGTGCCGTGGAATAAGGCCTaGGCATCGAGATGTACCCACAGAGAACACCAGATCCAGCGAAAA +
Preference number: 1 (lower is better)
Translates to: VELYLTAIEVPWNKA*ASRCTHREHQIQRK
Trigger: TTTTCGCTGGATCTGGTGTTCTCTGTGGGTACATCTCGATGCCCAGGCCTTATTCCACGGCACCTCAATAGCTGTCAGGTAGAGTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR TCA 90 bp CGTAGACATACTCATGCTGTCCAAAGTTGGCAGTGGAACTCTACCTaGCAGCTATTGAGGTGCCGTGGAATAAGGCCTGGGCATCGAGAT +
Preference number: 1 (lower is better)
Translates to: RRHTHAVQSWQWNST*QLLRCRGIRPGHRD
Trigger: ATCTCGATGCCCAGGCCTTATTCCACGGCACCTCAATAGCTGTCAGGTAGAGTTCCACTGCCAACTTTGGACAGCATGAGTATGTCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CCA 90 bp GCACTGCTTTCCGACGTGGTAGGTGTGGATGTTGCTGCTAAACCTTaGGTAAAATGTCCACTCAGGACGATGCCCATCTTTCGTCTGCAA +
Preference number: 1 (lower is better)
Translates to: ALLSDVVGVDVAAKP*VKCPLRTMPIFRLQ
Trigger: TTGCAGACGAAAGATGGGCATCGTCCTGAGTGGACATTTTACCCAAGGTTTAGCAGCAACATCCACACCTACCACGTCGGAAAGCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTaGGCCTGTTTATGCTCAGGATTGTCTTGGAAAGTCCAAAGCACC +
Preference number: 1 (lower is better)
Translates to: INWKRVARVQSAHVL*ACLCSGLSWKVQST
Trigger: GGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR GCA 90 bp AAAGCACCAGAAAGGTGTAGCATGTGCATTAAGGGCACTGCTGGCTaGCAGTTGTCAAGCTCCTCAACCTCTTGTATCTCATTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: KAPERCSMCIKGTAG*QLSSSSTSCISFFK
Trigger: TTTGAAAAATGAGATACAAGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTTAATGCACATGCTACACCTTTCTGGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR TCA 90 bp GGATATTTATCCTTTTGGACTTCAGGCAACGACATTTCAGAGGAGTaGTCAGAATGTGAGAAGGAGAGTTTCCGATCCAAGTCAGCAGTG +
Preference number: 1 (lower is better)
Translates to: GYLSFWTSGNDISEE*SECEKESFRSKSAV
Trigger: CACTGCTGACTTGGATCGGAAACTCTCCTTCTCACATTCTGATCACTCCTCTGAAATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CCA 90 bp GGCACTATTGAAAAATTCACTGGTGGGAGCATTGATCCTGCTTTGTaGAAGCCTTTACTCTGTTCTGGGTACATATATGGATTGTCGCCT +
Preference number: 1 (lower is better)
Translates to: GTIEKFTGGSIDPAL*KPLLCSGYIYGLSP
Trigger: AGGCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGAATTTTTCAATAGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR TCA 90 bp CAGCACCCTGCGCTTGGACTTCCCAGCCTCCAGAACTGTAAGAAATaGATTCCTATTGTTTATAAGCCATTCTGTTTATGGCGTTTTGTT +
Preference number: 1 (lower is better)
Translates to: QHPALGLPSLQNCKK*IPIVYKPFCLWRFV
Trigger: AACAAAACGCCATAAACAGAATGGCTTATAAACAATAGGAATTCATTTCTTACAGTTCTGGAGGCTGGGAAGTCCAAGCGCAGGGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR GCA 90 bp AACAGCTATGATATGCACATATTTTTCCCATGTGGCCTTTCTCTATaGCTTTGTCTCCCCACACACGTAGACATACTCATGCTGTCCAAA +
Preference number: 1 (lower is better)
Translates to: NSYDMHIFFPCGLSL*LCLPTHVDILMLSK
Trigger: TTTGGACAGCATGAGTATGTCTACGTGTGTGGGGAGACAAAGGCATAGAGAAAGGCCACATGGGAAAAATATGTGCATATCATAGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR TCA 90 bp TTCAACCTCTTTCTAGCTGGAAAGAAGCAAAAGCTGGAACAGCTATaGTATGCACATATTTTTCCCATGTGGCCTTTCTCTATGCCTTTG +
Preference number: 1 (lower is better)
Translates to: FNLFLAGKKQKLEQL*YAHIFPMWPFSMPL
Trigger: CAAAGGCATAGAGAAAGGCCACATGGGAAAAATATGTGCATATCATAGCTGTTCCAGCTTTTGCTTCTTTCCAGCTAGAAAGAGGTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR-3UTR TCA 90 bp TCTTGGGTCACTGCAAGCTCCGCCTCCCAGGTTGACACCATTCTCCTGCCTCAGTGTTTGCTTCTTGTCTaGTTGACAGGAGGCCCTAAA +
Preference number: 2 (lower is better)
Translates to: SWVTASSASQVDTILLPQCLLLV*LTGGPK
Trigger: TTTAGGGCCTCCTGTCAATCAGACAAGAAGCAAACA...CTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAGTGACCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 90 bp CTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTaGCCGAGGAAGACTCCATTAAAGAAGCACTGCTTTCCGACGTGG +
Preference number: 2 (lower is better)
Translates to: LPKHLSTVLSDRDLL*PRKTPLKKHCFPTW
Trigger: CCACGTCGGAAAGCAGTGCTTCTTTAATGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CAA 90 bp TTTCTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTaGTTGCCGAGGAAGACTCCATTAAAGAAGCACTGCTTTCCGACG +
Preference number: 2 (lower is better)
Translates to: FLPKHLSTVLSDRDL*LPRKTPLKKHCFPT
Trigger: CGTCGGAAAGCAGTGCTTCTTTAATGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR TCA 90 bp TTCACTGGTGGGAGCATTGATCCTGCTTTGTGGAAGCCTTTACTCTGTTCTGGGCAGAAGATGAGGAACTaGCACTTTTGCCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: FTGGSIDPALWKPLLCSGQKMRN*HFCQRV
Trigger: CACCCTCTGGCAAAAGTGTCAGTTCCTCATCTTCTG...CCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CCA 90 bp AGAGGATTAGCACGGATGTATGCTGATGTTAACCCAAGGAGTGGTCAGGCACAGCATGTCATAGACATGTaGAGTCTCAGCATGGACCCC +
Preference number: 2 (lower is better)
Translates to: RGLARMYADVNPRSGQAQHVIDM*SLSMDP
Trigger: GGGGTCCATGCTGAGACTCCACATGTCTATGACATG...CTGTGCCTGACCACTCCTTGGGTTAACATCAGCATACATCCGTGCTAATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR-3UTR CCA 90 bp TTTTGTTCTATATTGTGTCCTCCATTACTAACCCACCTGGTGGTTGCAGTTGACGTCAGGCACAGCAGCTaGCAGTCGGCACCATGCTCT +
Preference number: 2 (lower is better)
Translates to: FCSILCPPLLTHLVVAVDVRHSS*QSAPCS
Trigger: AGAGCATGGTGCCGACTGCCAGCTGCTGTGCCTGAC...GTCAACTGCAACCACCAGGTGGGTTAGTAATGGAGGACACAATATAGAACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR-3UTR TCA 90 bp AATAAGGCCTGGGCATCGAGATGTACCCACAGAGAACACCAGATCCAGCGAAAATGCTTCTTGTCTGATTaGCAGGAGGCCCTAAAACTC +
Preference number: 2 (lower is better)
Translates to: NKAWASRCTHREHQIQRKCFLSD*QEALKL
Trigger: GAGTTTTAGGGCCTCCTGTCAATCAGACAAGAAGCA...TTTTCGCTGGATCTGGTGTTCTCTGTGGGTACATCTCGATGCCCAGGCCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 90 bp AACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTaGTGGGCCTGTTTATGCTCAGGATTGTCTTGGAAAGTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: NINWKRVARVQSAHV*WACLCSGLSWKVQS
Trigger: GCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR TCA 90 bp AAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGTTCATAAGGCACTATTaGAAAATTCACTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: KGRQSAVSTCFVGLFMLRFIRHY*KIHWWE
Trigger: CTCCCACCAGTGAATTTTTCAATAGTGCCTTATGAA...CCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR GCA 90 bp GGACGATGCCCATCTTTCGTCTGCAACTTAAGCAGGCTGAATTCCTCAGGATATAAAGGGTCGCCAGAGTaGAGTCAGCACATGTTTTGT +
Preference number: 2 (lower is better)
Translates to: GRCPSFVCNLSRLNSSGYKGSPE*SQHMFC
Trigger: ACAAAACATGTGCTGACTGCACTCTGGCGACCCTTT...ATATCCTGAGGAATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCATCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR GCA 90 bp TCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGAGGAAGACTCCATTAAAGTGCCCATCTTTCGTCTaGAACTTAAGCAGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: STVLSDRDLLLPRKTPLKCPSFV*NLSRLN
Trigger: ATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCA...CTTTAATGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CAA 90 bp CCAGAAAGGTGTAGCATGTGCATTAAGGGCACTGCTGGCTGCCAGTaGTCAAGCTCCTCAACCTCTTGTATCTCATTTTTCAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: PERCSMCIKGTAGCQ*SSSSTSCISFFKLL
Trigger: CAACAGTTTGAAAAATGAGATACAAGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTTAATGCACATGCTACACCTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CCA 90 bp GCACCAGAAAGGTGTAGCATGTGCATTAAGGGCACTGCTGGCTGCCAGTTGTCAGGATATTTATCCTTTTaGACTTCAGGCAACGACATT +
Preference number: 2 (lower is better)
Translates to: APERCSMCIKGTAGCQLSGYLSF*TSGNDI
Trigger: AATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCC...TGACAACTGGCAGCCAGCAGTGCCCTTAATGCACATGCTACACCTTTCTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR TCA 90 bp TTTTGTTCTATATTGTGTCCTCCATTACTAACCCACCTGGTGGTTGCAGTTGACCTGTGTCAAAGCCTGTaGGGCAGCTTTTGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: FCSILCPPLLTHLVVAVDLCQSL*GSFCFH
Trigger: GTGAAAACAAAAGCTGCCTCACAGGCTTTGACACAG...GTCAACTGCAACCACCAGGTGGGTTAGTAATGGAGGACACAATATAGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR-3UTR GCA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTAAGGGTTACAATATCTaGCACTCACTCTCAAAGAGT +
Preference number: 2 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSKGYNI*HSLSKS
Trigger: ACTCTTTGAGAGTGAGTGGCAGATATTGTAACCCTT...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR-3UTR TCA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTATGATAGAATCTATGTaGAGGATATGCAGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSMIESM*RICRCL
Trigger: CAAACACCTGCATATCCTTCACATAGATTCTATCAT...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR-3UTR TCA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTTTTTACCAAAAGCAATaGAAGTTCACTGCTATGGTC +
Preference number: 2 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSFYQKQ*KFTAMV
Trigger: GACCATAGCAGTGAACTTTCATTGCTTTTGGTAAAA...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 90 bp TACTCTGTTCTGGGTACATATATGGATTGTCGCCTGGAGTTAACTTaGGGATTCCATTCCTGGGATCAATATCGTATTTCTTTCTCCCAA +
Preference number: 2 (lower is better)
Translates to: YSVLGTYMDCRLELT*GFHSWDQYRISFSQ
Trigger: TTGGGAGAAAGAAATACGATATTGATCCCAGGAATGGAATCCCAAAGTTAACTCCAGGCGACAATCCATATATGTACCCAGAACAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CCA 90 bp AGGATATTTATCCTTTTGGACTTCAGGCAACGACATTTCAGAGGAGTGATCAGACAGAGGGTGTTGTGTTaGCAAAACATCCCTTTTATT +
Preference number: 2 (lower is better)
Translates to: RIFILLDFRQRHFRGVIRQRVLC*QNIPFI
Trigger: AATAAAAGGGATGTTTTGCCAACACAACACCCTCTG...TCTGATCACTCCTCTGAAATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR GCA 72 bp CTGCAAGCTCCGCCTCCCAGGTTGACACCATTCTCCTaGCTCAGCCTCCCGAGTATAGTACAGTCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: LQAPPPRLTPFS*LSLPSIVQSWD
Trigger: GTCCCAGGACTGTACTATACTCGGGAGGCTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR TCA 72 bp CGTAAGCAGACACTCTGGGGAGGCCAGGAGGCTCACTaGCACTTGGGCCTGTTTCCACAGAAGATGAGGAAC +
Preference number: 3 (lower is better)
Translates to: RKQTLWGGQEAH*HLGLFPQKMRN
Trigger: GTTCCTCATCTTCTGTGGAAACAGGCCCAAGTGTCAGTGAGCCTCCTGGCCTCCCCAGAGTGTCTGCTTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR GCA 72 bp GGAGTGGTCAGGCACAGCAGCTGGCAGTCGGCACCATaGTCTCTGCCAGTTAGTCTAGAGGCACATATGAAG +
Preference number: 3 (lower is better)
Translates to: GVVRHSSWQSAP*SLPVSLEAHMK
Trigger: CTTCATATGTGCCTCTAGACTAACTGGCAGAGAGCATGGTGCCGACTGCCAGCTGCTGTGCCTGACCACTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CCA 72 bp GCAGTGGAACTCTACCTGACAGCTATTGAGGTGCCGTaGAATAAGGCCTGGGCATCGAGATGTACCCACAGA +
Preference number: 3 (lower is better)
Translates to: AVELYLTAIEVP*NKAWASRCTHR
Trigger: TCTGTGGGTACATCTCGATGCCCAGGCCTTATTCCACGGCACCTCAATAGCTGTCAGGTAGAGTTCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR TCA 72 bp ACTCATGCTGTCCAAAGTTGGCAGTGGAACTCTACCTaGCAGCTATTGAGGTGCCGTGGAATAAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: THAVQSWQWNST*QLLRCRGIRPG
Trigger: CCCAGGCCTTATTCCACGGCACCTCAATAGCTGTCAGGTAGAGTTCCACTGCCAACTTTGGACAGCATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR-3UTR CAA 90 bp TCTTGGGTCACTGCAAGCTCCGCCTCCCAGGTTGACACCATTCTCCTGCCTCAGGTATTTGTGTTGTGGTaGTTAGACAACATCCTTGAC +
Preference number: 3 (lower is better)
Translates to: SWVTASSASQVDTILLPQVFVLW*LDNILD
Trigger: GTCAAGGATGTTGTCTAACAACCACAACACAAATAC...CTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAGTGACCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR TCA 72 bp AGGCTCACTGACACTTGGGCCTGTTTCCACAGAAGATaGGGAACTGACACTTTTGCCAGAGGGTGTTGTGTT +
Preference number: 3 (lower is better)
Translates to: RLTDTWACFHRR*GTDTFARGCCV
Trigger: AACACAACACCCTCTGGCAAAAGTGTCAGTTCCTCATCTTCTGTGGAAACAGGCCCAAGTGTCAGTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR GCA 72 bp GAAAGGTGTAGCATGTGCATTAAGGGCACTGCTGGCTaGCAGTTGTCAAGCTCCTCAACCTCTTGTATCTCA +
Preference number: 3 (lower is better)
Translates to: ERCSMCIKGTAG*QLSSSSTSCIS
Trigger: TGAGATACAAGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTTAATGCACATGCTACACCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CCA 72 bp TCCGACGTGGTAGGTGTGGATGTTGCTGCTAAACCTTaGGTAAAATGTCCACTCAGGACGATGCCCATCTTT +
Preference number: 3 (lower is better)
Translates to: SDVVGVDVAAKP*VKCPLRTMPIF
Trigger: AAAGATGGGCATCGTCCTGAGTGGACATTTTACCCAAGGTTTAGCAGCAACATCCACACCTACCACGTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CAA 90 bp TTCTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGACCAGAGGGTGTTGTGTaGGCAAAACATCCCTTTTAT +
Preference number: 3 (lower is better)
Translates to: FSQSTCPPSSLIETSCCRPEGVV*AKHPFY
Trigger: ATAAAAGGGATGTTTTGCCAACACAACACCCTCTGG...TCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CAA 90 bp TCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGATTGTTTTTGCCAGAGGGTGTaGTGTTGGCAAAACATCCCT +
Preference number: 3 (lower is better)
Translates to: SPECSQHMFCGPVYAQDCFCQRV*CWQNIP
Trigger: AGGGATGTTTTGCCAACACAACACCCTCTGGCAAAA...ACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CCA 72 bp AAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTaGGCCTGTTTATGCTCAGGATTGTCTTGGAAAGTC +
Preference number: 3 (lower is better)
Translates to: KRVARVQSAHVL*ACLCSGLSWKV
Trigger: GACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CAA 90 bp AAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGTTTCATAAGGCACTATaGAAAAATTCACTGGTGGGA +
Preference number: 3 (lower is better)
Translates to: KGRQSAVSTCFVGLFMLRFHKAL*KNSLVG
Trigger: TCCCACCAGTGAATTTTTCAATAGTGCCTTATGAAA...CCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CAA 90 bp AATAAGGCCTGGGCATCGAGATGTACCCACAGAGAACACCAGATCCAGCGAAAAACCACGCCCAGCCGGTaGTTTTCCTTAATATATTTA +
Preference number: 3 (lower is better)
Translates to: NKAWASRCTHREHQIQRKTTPSR*FSLIYL
Trigger: TAAATATATTAAGGAAAACAACCGGCTGGGCGTGGT...TTTTCGCTGGATCTGGTGTTCTCTGTGGGTACATCTCGATGCCCAGGCCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR GCA 72 bp AGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATaGTCAGGATTGTCTTGGAAAGTCCAAAGCACCAGA +
Preference number: 3 (lower is better)
Translates to: RVQSAHVLWACL*SGLSWKVQSTR
Trigger: TCTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CAA 90 bp AGCCTTTACTCTGTTCTGGGTACATATATGGATTGTCGCCTGGAGTTAACTTTGTCTGATAGAGACCTCTaGTTGCCGAGGAAGACTCCA +
Preference number: 3 (lower is better)
Translates to: SLYSVLGTYMDCRLELTLSDRDL*LPRKTP
Trigger: TGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGA...CAAAGTTAACTCCAGGCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR TCA 72 bp TCACCTTTTCCTCCAAATGTTTGCTTCTTGTCTGATTaGCAGGAGGCCCTAAAACTCATGACTGGTGGTCAC +
Preference number: 3 (lower is better)
Translates to: SPFPPNVCFLSD*QEALKLMTGGH
Trigger: GTGACCACCAGTCATGAGTTTTAGGGCCTCCTGTCAATCAGACAAGAAGCAAACATTTGGAGGAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CCA 72 bp GAAAAATTCACTGGTGGGAGCATTGATCCTGCTTTGTaGAAGCCTTTACTCTGTTCTGGGTACATATATGGA +
Preference number: 3 (lower is better)
Translates to: EKFTGGSIDPAL*KPLLCSGYIYG
Trigger: TCCATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGAATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR-3UTR CAA 90 bp TTTTGTGGGCCTGTTTATGCTCAGGATTGTCTTGGAAAGTCCAAAGCACCAGAAAGGATATTTATCCTTTaGGACTTCAGGCAACGACAT +
Preference number: 3 (lower is better)
Translates to: FCGPVYAQDCLGKSKAPERIFIL*DFRQRH
Trigger: ATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCCT...TTCTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CCA 72 bp TTTTGGGAAATAAATCATGCTCATGTCATAGACATGTaGAGTCTCAGCATGGACCCCAATCTCTTTCCACTT +
Preference number: 3 (lower is better)
Translates to: FWEINHAHVIDM*SLSMDPNLFPL
Trigger: AAGTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGCATGATTTATTTCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR TCA 72 bp CACATGTTTTTATTTACCAAAGACCCTACAGTGAGGTaGAGGGGATCTTTACATCTAACAGGTTCAACCTCT +
Preference number: 3 (lower is better)
Translates to: HMFLFTKDPTVR*RGSLHLTGSTS
Trigger: AGAGGTTGAACCTGTTAGATGTAAAGATCCCCTTCACCTCACTGTAGGGTCTTTGGTAAATAAAAACATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp TCTTGGGTCACTGCAAGCTCCGCCTCCCAGGTTGACACCATTCTCCTGCCTCAGGTCAGGCACAGCAGCTaGCAGTCGGCACCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SWVTASSASQVDTILLPQVRHSS*QSAPCS
Trigger: AGAGCATGGTGCCGACTGCCAGCTGCTGTGCCTGAC...CTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAGTGACCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGGCCGCAGGTCGTGCTTaGGATGGAGGGGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLAAGRA*DGGETA
Trigger: TGCCGTCTCCCCTCCATCTCAAGCACGACCTGCGGC...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTGGAGGCCCGGGTCTGTaGTCAGAGGCCTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVGGPGL*SEASTD
Trigger: GTCCGTGGAGGCCTCTGAGCACAGACCCGGGCCTCC...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR GCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCGACACCGCAGCCGCCTaGTTCTCCCACAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETDTAAA*FSHRGA
Trigger: CGCGCCTCTGTGGGAGAAGCAGGCGGCTGCGGTGTC...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp TTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCCTCATGGAACCAACTGGCAACTaGACTGCCGAACGCACGCCG +
Preference number: 4 (lower is better)
Translates to: LGGKAIGRRLGHETRALMEPTGN*TAERTP
Trigger: CGGCGTGCGTTCGGCAGTTCAGTTGCCAGTTGGTTC...CATGAGGGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTCCGAACCAGGCTCGCTaGAGCCCCCATCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPPNQAR*SPHPAQ
Trigger: TTGAGCTGGATGGGGGCTGCAGCGAGCCTGGTTCGG...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR CCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGGGCGTTTCGTGGTTTaGAAGCCCTGGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPGRFVV*KPWEPQ
Trigger: CTGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCC...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR CCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGCACCTGGGCGTTTCGTaGTTTGGAAGCCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLHLGVS*FGSPGS
Trigger: GCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTG...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR CCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTAGGTCGTGCTTGAGATaGAGGGGAGACGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPRSCLR*RGDGSP
Trigger: GGGGCTGCCGTCTCCCCTCCATCTCAAGCACGACCT...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTAGGTCGTGCTTGAGATaGAGGGGAGACGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACRSCLR*RGDGSP
Trigger: GGGGCTGCCGTCTCCCCTCCATCTCAAGCACGACCT...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
3UTR CAA 72 bp CACAATCTTGGGTCACTGCAAGCTCCGCCTCCCAGGTaGACACCATTCTCCTGCCTCAGCCTCCCGAGTATA +
Preference number: 4 (lower is better)
Translates to: HNLGSLQAPPPR*TPFSCLSLPSI
Trigger: TATACTCGGGAGGCTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAGTGACCCAAGATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGGCCAGGAGGCTCACTaGCACTTGGGCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMGQEAH*HLGLFP
Trigger: TGGAAACAGGCCCAAGTGTCAGTGAGCCTCCTGGCC...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGTCTGCCGCAGGTCGTaGTTGAGATGGAGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACVCRRS*LRWRGD
Trigger: GTCTCCCCTCCATCTCAAGCACGACCTGCGGCAGAC...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGCCTTCTCCAGCTGTCTaGCGCAGGTCGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLPSPAV*RRSCLR
Trigger: TCTCAAGCACGACCTGCGGCAGACAGCTGGAGAAGG...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCAACTGGCAACTGAACTaGCGAACGCACGCCGCACGC +
Preference number: 4 (lower is better)
Translates to: MVLGGKAIGRRLGHETRANWQLN*RTHAAR
Trigger: GCGTGCGGCGTGCGTTCGGCAGTTCAGTTGCCAGTT...GGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp TCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGATTGTAGGTCGTGCTTGAGATaGAGGGGAGACGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPECSQHMFCGPVYAQDCRSCLR*RGDGSP
Trigger: GGGGCTGCCGTCTCCCCTCCATCTCAAGCACGACCT...ACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAAGGTCGTGCTTGAGATaGAGGGGAGACGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLRSCLR*RGDGSP
Trigger: GGGGCTGCCGTCTCCCCTCCATCTCAAGCACGACCT...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTGCCGCAGGTCGTGCTTaGGATGGAGGGGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSAAGRA*DGGETA
Trigger: TGCCGTCTCCCCTCCATCTCAAGCACGACCTGCGGC...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGCCAGGAGGCTCACTaGCACTTGGGCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYGQEAH*HLGLFP
Trigger: TGGAAACAGGCCCAAGTGTCAGTGAGCCTCCTGGCC...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp GCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGATTGTCTGGCCAGGAGGCTCACTaGCACTTGGGCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ARVQSAHVLWACLCSGLSGQEAH*HLGLFP
Trigger: TGGAAACAGGCCCAAGTGTCAGTGAGCCTCCTGGCC...AGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTCATCAACTGGCAACTaGACTGCCGAACGCACGCCG +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMSSTGN*TAERTP
Trigger: CGGCGTGCGTTCGGCAGTTCAGTTGCCAGTTGATGA...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323108.12
CDS-3UTR TCA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACACACCAGGGAACCTTCTaGGAGCAGTTTCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTHQGTF*EQFPVP
Trigger: TGGCACAGGAAACTGCTCTCAGAAGGTTCCCTGGTG...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp AGAGGATTAGCACGGATGTATGCTGATGTTAACCCAAGGAGTGGTCAGGCACAGCTCCGCCTCCCAGGTTaGCACCATTCTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RGLARMYADVNPRSGQAQLRLPG*HHSPAS
Trigger: TGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAG...CTGTGCCTGACCACTCCTTGGGTTAACATCAGCATACATCCGTGCTAATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTCTGCCGCAGGTCGTaGTTGAGATGGAGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYVCRRS*LRWRGD
Trigger: GTCTCCCCTCCATCTCAAGCACGACCTGCGGCAGAC...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTCCTTCTCCAGCTGTCTaGCGCAGGTCGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVPSPAV*RRSCLR
Trigger: TCTCAAGCACGACCTGCGGCAGACAGCTGGAGAAGG...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTCCTTCTCCAGCTGTCTaGCGCAGGTCGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPPSPAV*RRSCLR
Trigger: TCTCAAGCACGACCTGCGGCAGACAGCTGGAGAAGG...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAAACTGGCAACTGAACTaGCGAACGCACGCCGCACGC +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLNWQLN*RTHAAR
Trigger: GCGTGCGGCGTGCGTTCGGCAGTTCAGTTGCCAGTT...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323108.12
ENST00000674044.1
CDS-3UTR CCA 90 bp TTCTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGATCAGGAGGGCAGGACTaGCCTCTAAACGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSQSTCPPSSLIETSCCRSGGQD*PLNGSL
Trigger: AAGGCTCCCGTTTAGAGGCCAGTCCTGCCCTCCTGA...TCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGAGACGGCAGCCCCGTaGACTGTTTCCAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMETAAP*TVSSEH
Trigger: ATGCTCACTGGAAACAGTCCACGGGGCTGCCGTCTC...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp GTTGCCGAGGAAGACTCCATTAAAGAAGCACTGCTTTCCGACGTGGTAGGTGTGGAGACGGCAGCCCCGTaGACTGTTTCCAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VAEEDSIKEALLSDVVGVETAAP*TVSSEH
Trigger: ATGCTCACTGGAAACAGTCCACGGGGCTGCCGTCTC...CACACCTACCACGTCGGAAAGCAGTGCTTCTTTAATGGAGTCTTCCTCGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGAGACGGCAGCCCCGTaGACTGTTTCCAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACETAAP*TVSSEH
Trigger: ATGCTCACTGGAAACAGTCCACGGGGCTGCCGTCTC...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp GCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACTTGGCCAGGAGGCTCACTaGCACTTGGGCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: AHVIDMWSLSMDPNLFPLGQEAH*HLGLFP
Trigger: TGGAAACAGGCCCAAGTGTCAGTGAGCCTCCTGGCC...AAGTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTCACTGGTGGGAGCATTaGTCCTGCTTTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACHWWEH*SCFVEA
Trigger: GGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTG...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAATGACTGGTGGTCACTaGGCTCTCACCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLMTGGH*ALTLLG
Trigger: GCCAAGCAGGGTGAGAGCTCAGTGACCACCAGTCAT...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp AGCAGTGGTGTCTACGTAAGCAGACACTCTGGGGAGGCCAGGAGGCTCACTGACTGCCCATCTTTCGTCTaGAACTTAAGCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSGVYVSRHSGEARRLTDCPSFV*NLSRLN
Trigger: ATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCA...GTCAGTGAGCCTCCTGGCCTCCCCAGAGTGTCTGCTTACGTAGACACCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR GCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGGTCCACTCAGGACGATaGCCATCTTTCGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLVHSGR*PSFVCN
Trigger: GTTGCAGACGAAAGATGGGCATCGTCCTGAGTGGAC...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGAAGGGCACTGCTGGCTaGCAGTTGTCAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMKGTAG*QLSSSS
Trigger: TGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTT...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTAAGGGCACTGCTGGCTaGCAGTTGTCAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVKGTAG*QLSSSS
Trigger: TGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTT...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTAAGGGCACTGCTGGCTaGCAGTTGTCAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPKGTAG*QLSSSS
Trigger: TGAGGAGCTTGACAACTGGCAGCCAGCAGTGCCCTT...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ATCCAAGTCAGCAGTGGTGTCTACGTAAGCAGACACTCTGGGGAGGCCAGGAGGAAAGGGTCGCCAGAGTaGAGTCAGCACATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IQVSSGVYVSRHSGEARRKGSPE*SQHMFC
Trigger: ACAAAACATGTGCTGACTGCACTCTGGCGACCCTTT...CCTCCTGGCCTCCCCAGAGTGTCTGCTTACGTAGACACCACTGCTGACTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGCTTACTCCCTCCACCTaGGCGTTTCGTGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLLTPST*AFRGLE
Trigger: TTCCAAACCACGAAACGCCCAGGTGGAGGGAGTAAG...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR CCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATCAGGAGGGCAGGACTaGCCTCTAAACGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLSGGQD*PLNGSL
Trigger: AAGGCTCCCGTTTAGAGGCCAGTCCTGCCCTCCTGA...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288390.2
ENST00000506468.1
CDS-3UTR CCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAGAGACGGCAGCCCCGTaGACTGTTTCCAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLETAAP*TVSSEH
Trigger: ATGCTCACTGGAAACAGTCCACGGGGCTGCCGTCTC...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp AGCAGTGGTGTCTACGTAAGCAGACACTCTGGGGAGGCCAGGAGGCTCACTGACGTTGCTGCTAAACCTTaGGTAAAATGTCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: SSGVYVSRHSGEARRLTDVAAKP*VKCPLR
Trigger: CCTGAGTGGACATTTTACCCAAGGTTTAGCAGCAAC...GTCAGTGAGCCTCCTGGCCTCCCCAGAGTGTCTGCTTACGTAGACACCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCGCAGTGGCACAATCTTaGGTCACTGCAAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETAVAQS*VTASSA
Trigger: GGCGGAGCTTGCAGTGACCCAAGATTGTGCCACTGC...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCCGTGGAATAAGGCCTaGGCATCGAGATGTACCCAC +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMPWNKA*ASRCTH
Trigger: GTGGGTACATCTCGATGCCCAGGCCTTATTCCACGG...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGCTATTGAGGTGCCGTaGAATAAGGCCTGGGCATCG +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPAIEVP*NKAWAS
Trigger: CGATGCCCAGGCCTTATTCCACGGCACCTCAATAGC...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp ATCCAAGTCAGCAGTGGTGTCTACGTAAGCAGACACTCTGGGGAGGCCAGGAGGTGTTTCCACAGAAGATaGGGAACTGACACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: IQVSSGVYVSRHSGEARRCFHRR*GTDTFA
Trigger: GGCAAAAGTGTCAGTTCCTCATCTTCTGTGGAAACA...CCTCCTGGCCTCCCCAGAGTGTCTGCTTACGTAGACACCACTGCTGACTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTACACTGGTGGGAGCATTaGTCCTGCTTTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLHWWEH*SCFVEA
Trigger: GGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTG...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTCAGTGGAACTCTACCTaGCAGCTATTGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVQWNST*QLLRCR
Trigger: ACGGCACCTCAATAGCTGTCAGGTAGAGTTCCACTG...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp CATGCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACCTTCTCCAGCTGTCTaGCGCAGGTCGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HAHVIDMWSLSMDPNLFPPSPAV*RRSCLR
Trigger: TCTCAAGCACGACCTGCGGCAGACAGCTGGAGAAGG...TGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTGTCCACTCAGGACGATaGCCATCTTTCGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVVHSGR*PSFVCN
Trigger: GTTGCAGACGAAAGATGGGCATCGTCCTGAGTGGAC...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTCCACTCAGGACGATaGCCATCTTTCGTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPVHSGR*PSFVCN
Trigger: GTTGCAGACGAAAGATGGGCATCGTCCTGAGTGGAC...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp AGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGATCTCTGCTTTGGTGGTaGTCTTGTAGGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVARVQSAHVLWACLCSGSLLWW*SCRSSP
Trigger: TGGAGAGGACCTACAAGAGCACCACCAAAGCAGAGA...TCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR GCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGTGGCCTTTCTCTATaGCTTTGTCTCCCCACACAC +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLCGLSL*LCLPTH
Trigger: GTGTGTGGGGAGACAAAGGCATAGAGAAAGGCCACA...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGAGGCTCACTGACACTTaGGCCTGTTTCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLRLTDT*ACFHRR
Trigger: TCTTCTGTGGAAACAGGCCCAAGTGTCAGTGAGCCT...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGCATCAACGAACCAACTaGCAACTGAACTGCCGAACG +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLHQRTN*QLNCRT
Trigger: CGTTCGGCAGTTCAGTTGCCAGTTGGTTCGTTGATG...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTTATGAGCCAGAAGGCTaGCCCTCAGCAGACACTGAA +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPYEPEG*PSADTE
Trigger: TTCAGTGTCTGCTGAGGGCCAGCCTTCTGGCTCATA...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACATGTGGAGTCTCAGCATaGACCCCAATCTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTCGVSA*TPISFH
Trigger: GTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACA...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTGTGGACTGTTTCCAGTaGGCATGGATGGACTCATCT +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVVDCFQ*AWMDSS
Trigger: AGATGAGTCCATCCATGCTCACTGGAAACAGTCCAC...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288390.2
ENST00000506468.1
CDS-3UTR TCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGGACTGTTTCCAGTaGGCATGGATGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPVDCFQ*AWMDSS
Trigger: TGATGAGTCCATCCATGCTCACTGGAAACAGTCCAC...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323108.12
ENST00000674044.1
CDS-3UTR TCA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACACTGTGTCAAAGCCTGTaGGGCAGCTTTTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTLCQSL*GSFCFH
Trigger: GTGAAAACAAAAGCTGCCTCACAGGCTTTGACACAG...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTCCAAAGACCCTACAGTaGGGTGAAGGGGATCTTTAC +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPPKTLQ*GEGDLY
Trigger: GTAAAGATCCCCTTCACCTCACTGTAGGGTCTTTGG...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTACCATCCAGCTCAAGGTaGTCCTTCTTTTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLPSSSR*SFFSTS
Trigger: CGAGGTGGAAAAGAAGGAGCACCTTGAGCTGGATGG...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR GCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCTTCAAGAGATTCTCCTaGCTCAGCCTCCCGAGTACC +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETFKRFS*LSLPST
Trigger: GGTACTCGGGAGGCTGAGGCAGGAGAATCTCTTGAA...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATTGGCAGTCGGCACCATaGTCTCTGCCAGTTAGTCTA +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYWQSAP*SLPVSL
Trigger: TAGACTAACTGGCAGAGAGCATGGTGCCGACTGCCA...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTAGGCTCACTGACACTTaGGCCTGTTTCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACRLTDT*ACFHRR
Trigger: TCTTCTGTGGAAACAGGCCCAAGTGTCAGTGAGCCT...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGATGGACTCATCAACTaGCAACTGAACTGCCGAACG +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPDGLIN*QLNCRT
Trigger: CGTTCGGCAGTTCAGTTGCCAGTTGATGAGTCCATC...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323108.12
CDS-3UTR CCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTCCAGTGAGCATGGATaGACTCATCAACTGGCAACT +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLSSEHG*THQLAT
Trigger: AGTTGCCAGTTGATGAGTCCATCCATGCTCACTGGA...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323108.12
CDS-3UTR CCA 90 bp GCACCAGAAAGGTGTAGCATGTGCATTAAGGGCACTGCTGGCTGCCAGTTGTCAGGCAGGTCAAATCTCTaGCTCCCTTTACTCATAGGT +
Preference number: 4 (lower is better)
Translates to: APERCSMCIKGTAGCQLSGRSNL*LPLLIG
Trigger: ACCTATGAGTAAAGGGAGCCAGAGATTTGACCTGCC...TGACAACTGGCAGCCAGCAGTGCCCTTAATGCACATGCTACACCTTTCTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATCAGAAGATGAGGAACTaGCACTTTTGCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYQKMRN*HFCQRV
Trigger: CACCCTCTGGCAAAAGTGTCAGTTCCTCATCTTCTG...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTCACTGGTGGGAGCATTaGTCCTGCTTTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSHWWEH*SCFVEA
Trigger: GGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTG...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp AATAAGGCCTGGGCATCGAGATGTACCCACAGAGAACACCAGATCCAGCGAAAAGTGGACTGTTTCCAGTaGGCATGGATGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: NKAWASRCTHREHQIQRKVDCFQ*AWMDSS
Trigger: TGATGAGTCCATCCATGCTCACTGGAAACAGTCCAC...TTTTCGCTGGATCTGGTGTTCTCTGTGGGTACATCTCGATGCCCAGGCCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp ATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCGACCCTACAGTGAGGTaGAGGGGATCTTTACATCTA +
Preference number: 4 (lower is better)
Translates to: MVLGGKAIGRRLGHETRADPTVR*RGSLHL
Trigger: TAGATGTAAAGATCCCCTTCACCTCACTGTAGGGTC...GGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTAAAGGGTCGCCAGAGTaGAGTCAGCACATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVKGSPE*SQHMFC
Trigger: ACAAAACATGTGCTGACTGCACTCTGGCGACCCTTT...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGAAAGGGTCGCCAGAGTaGAGTCAGCACATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMKGSPE*SQHMFC
Trigger: ACAAAACATGTGCTGACTGCACTCTGGCGACCCTTT...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGAGAGCAGTTTCCTGTaGCACCTAGATAATCTCACC +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPESSFL*HLDNLT
Trigger: GGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTC...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp GCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGATTGTCTAGGCTCACTGACACTTaGGCCTGTTTCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: ARVQSAHVLWACLCSGLSRLTDT*ACFHRR
Trigger: TCTTCTGTGGAAACAGGCCCAAGTGTCAGTGAGCCT...AGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGGTTGCTGCTAAACCTTaGGTAAAATGTCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLVAAKP*VKCPLR
Trigger: CCTGAGTGGACATTTTACCCAAGGTTTAGCAGCAAC...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCCCAGAAAGGCAAGTTaGGAATTTGTGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMPRKAS*EFVEEA
Trigger: AGCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGG...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTCCAGTGAGCATGGATaGACTCATCAACGAACCAAC +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVSSEHG*THQRTN
Trigger: GTTGGTTCGTTGATGAGTCCATCCATGCTCACTGGA...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATCATGTCATAGACATGTaGAGTCTCAGCATGGACCCC +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYHVIDM*SLSMDP
Trigger: GGGGTCCATGCTGAGACTCCACATGTCTATGACATG...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp AAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTaGTTGCCGAGGAAGACTCCATTAAAGAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: KHLSTVLSDRDL*LPRKTPLKKHC
Trigger: GCAGTGCTTCTTTAATGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTGTTTCCACAGAAGATaGGGAACTGACACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACCFHRR*GTDTFA
Trigger: GGCAAAAGTGTCAGTTCCTCATCTTCTGTGGAAACA...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTTGTTTCCACAGAAGATaGGGAACTGACACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPCFHRR*GTDTFA
Trigger: GGCAAAAGTGTCAGTTCCTCATCTTCTGTGGAAACA...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp TTTGTGGAAGCCTTTACTCTGTTCTGGGTACATATATGGATTGTCGCCTGGAGTCACTGGTGGGAGCATTaGTCCTGCTTTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FVEAFTLFWVHIWIVAWSHWWEH*SCFVEA
Trigger: GGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTG...ACTCCAGGCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCTGCTTCTTGTCTGATTaGCAGGAGGCCCTAAAACTC +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETCFLSD*QEALKL
Trigger: GAGTTTTAGGGCCTCCTGTCAATCAGACAAGAAGCA...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTGCCCATCTTTCGTCTaGAACTTAAGCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVCPSFV*NLSRLN
Trigger: ATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCA...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTGCCCATCTTTCGTCTaGAACTTAAGCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMCPSFV*NLSRLN
Trigger: ATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCA...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAAAGGGTCGCCAGAGTaGAGTCAGCACATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETKGSPE*SQHMFC
Trigger: ACAAAACATGTGCTGACTGCACTCTGGCGACCCTTT...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGTTGCTGCTAAACCTTaGGTAAAATGTCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMVAAKP*VKCPLR
Trigger: CCTGAGTGGACATTTTACCCAAGGTTTAGCAGCAAC...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTACCCAGAAAGGCAAGTTaGGAATTTGTGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLPRKAS*EFVEEA
Trigger: AGCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGG...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp TTCACTGGTGGGAGCATTGATCCTGCTTTGTGGAAGCCTTTACTCTGTTCTGGGCCCAGAAAGGCAAGTTaGGAATTTGTGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FTGGSIDPALWKPLLCSGPRKAS*EFVEEA
Trigger: AGCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGG...CCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCCCCAGAAAGGCAAGTTaGGAATTTGTGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETPRKAS*EFVEEA
Trigger: AGCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGG...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTTCAGCACATGTTTTGTaGGCCTGTTTATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPSAHVL*ACLCSG
Trigger: TCCTGAGCATAAACAGGCCCACAAAACATGTGCTGA...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTCAGCACATGTTTTGTaGGCCTGTTTATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMSAHVL*ACLCSG
Trigger: TCCTGAGCATAAACAGGCCCACAAAACATGTGCTGA...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTCAGCACATGTTTTGTaGGCCTGTTTATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACSAHVL*ACLCSG
Trigger: TCCTGAGCATAAACAGGCCCACAAAACATGTGCTGA...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAAAACTCATGACTGGTaGTCACTGAGCTCTCACCCT +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETKTHDW*SLSSHP
Trigger: AGGGTGAGAGCTCAGTGACCACCAGTCATGAGTTTT...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp TGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTaGTGGGCCTGTTTATGCTCAGGATTGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: WKRVARVQSAHV*WACLCSGLSWK
Trigger: TTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTTTCCACAGAAGATaGGGAACTGACACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLCFHRR*GTDTFA
Trigger: GGCAAAAGTGTCAGTTCCTCATCTTCTGTGGAAACA...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp AATAAGGCCTGGGCATCGAGATGTACCCACAGAGAACACCAGATCCAGCGAAAAGCTGTAAAAATGCCGTaGGTCACTAGTTTGACTGTG +
Preference number: 4 (lower is better)
Translates to: NKAWASRCTHREHQIQRKAVKMP*VTSLTV
Trigger: CACAGTCAAACTAGTGACTCACGGCATTTTTACAGC...TTTTCGCTGGATCTGGTGTTCTCTGTGGGTACATCTCGATGCCCAGGCCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATTGCCCATCTTTCGTCTaGAACTTAAGCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYCPSFV*NLSRLN
Trigger: ATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCA...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTGTGGGCCTGTTTATaGTCAGGATTGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACLWACL*SGLSWK
Trigger: TTTCCAAGACAATCCTGAGCATAAACAGGCCCACAA...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTTTGTGGGCCTGTTTATaGTCAGGATTGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPLWACL*SGLSWK
Trigger: TTTCCAAGACAATCCTGAGCATAAACAGGCCCACAA...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR GCA 90 bp CATGCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCAACTGAGCTCTCACCCTaGTTGGCTATTGTAGATAGG +
Preference number: 4 (lower is better)
Translates to: HAHVIDMWSLSMDPNLFPTELSP*LAIVDR
Trigger: CCTATCTACAATAGCCAAGCAGGGTGAGAGCTCAGT...TGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAGTTGCTGCTAAACCTTaGGTAAAATGTCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLVAAKP*VKCPLR
Trigger: CCTGAGTGGACATTTTACCCAAGGTTTAGCAGCAAC...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACAGCCTTTACTCTGTTCTaGGTACATATATGGATTGTC +
Preference number: 4 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTAFTLF*VHIWIV
Trigger: GACAATCCATATATGTACCCAGAACAGAGTAAAGGC...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACAATTGATCCTGCTTTGTaGAAGCCTTTACTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTIDPAL*KPLLCS
Trigger: AGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAAT...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp AGTGATCAGAATGTGAGAAGGAGAGTTTCCGATCCAAGTCAGCAGTGGTGTCTAGACTCTCTGCTTTGGTaGTGCTCTTGTAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SDQNVRRRVSDPSQQWCLDSLLW*CSCRSS
Trigger: AGAGGACCTACAAGAGCACCACCAAAGCAGAGAGTC...TAGACACCACTGCTGACTTGGATCGGAAACTCTCCTTCTCACATTCTGATCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp TTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCCTCATGAAGCCATTCTGTTTATaGCGTTTTGTTATAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGGKAIGRRLGHETRALMKPFCL*RFVIAA
Trigger: GGCTGCTATAACAAAACGCCATAAACAGAATGGCTT...CATGAGGGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAATGAGCCACCACACCTaGCTAAATGTATCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NWKRVARVQSAHVLWACLMSHHT*LNVSCS
Trigger: AGAACACGATACATTTAGCCAGGTGTGGTGGCTCAT...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCCAACCTCTTTCTAGCTaGAAAGAAGCAAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: MVLGGKAIGRRLGHETRAQPLSS*KEAKAG
Trigger: TCCAGCTTTTGCTTCTTTCCAGCTAGAAAGAGGTTG...GGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp TTTTGTGGGCCTGTTTATGCTCAGGATTGTCTTGGAAAGTCCAAAGCACCAGAAGTGGACTGTTTCCAGTaGGCATGGATGGACTCATCT +
Preference number: 4 (lower is better)
Translates to: FCGPVYAQDCLGKSKAPEVDCFQ*AWMDSS
Trigger: AGATGAGTCCATCCATGCTCACTGGAAACAGTCCAC...TTCTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTTCATAAGGCACTATTaGAAAATTCACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVFIRHY*KIHWWE
Trigger: CTCCCACCAGTGAATTTTTCAATAGTGCCTTATGAA...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR TCA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACATTATATAGACCTCTTTaGAACCTAGAGACTACTCCA +
Preference number: 4 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTLYRPL*NLETTP
Trigger: TGGAGTAGTCTCTAGGTTTCAAAGAGGTCTATATAA...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp AATAAGGCCTGGGCATCGAGATGTACCCACAGAGAACACCAGATCCAGCGAAAATTGTGGGCCTGTTTATaGTCAGGATTGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: NKAWASRCTHREHQIQRKLWACL*SGLSWK
Trigger: TTTCCAAGACAATCCTGAGCATAAACAGGCCCACAA...TTTTCGCTGGATCTGGTGTTCTCTGTGGGTACATCTCGATGCCCAGGCCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGGGATATTTATCCTTTTaGACTTCAGGCAACGACATT +
Preference number: 4 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLGYLSF*TSGNDI
Trigger: AATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCC...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACAGGATATTTATCCTTTTaGACTTCAGGCAACGACATT +
Preference number: 4 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTGYLSF*TSGNDI
Trigger: AATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCC...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGCCTTTACTCTGTTCTaGGTACATATATGGATTGTC +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACAFTLF*VHIWIV
Trigger: GACAATCCATATATGTACCCAGAACAGAGTAAAGGC...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGCCTTTACTCTGTTCTaGGTACATATATGGATTGTC +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMAFTLF*VHIWIV
Trigger: GACAATCCATATATGTACCCAGAACAGAGTAAAGGC...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTATTGATCCTGCTTTGTaGAAGCCTTTACTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: STGKGSPECSQHMFCGPVIDPAL*KPLLCS
Trigger: AGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAAT...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGAAAGTTCACTGCTATaGTCTAAATGTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACESSLL*SKCLSS
Trigger: GGAGGACAAACATTTAGACCATAGCAGTGAACTTTC...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCTTTAAATTATTATGTTaGGAGCAGGGGTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETFKLLC*EQGWAC
Trigger: ACAGGCCCACCCCTGCTCCCAACATAATAATTTAAA...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp GCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACTTACCCTTTCTATCATATaGGGACACAGCAAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: AHVIDMWSLSMDPNLFPLTLSII*GHSKKV
Trigger: TACCTTCTTGCTGTGTCCTCATATGATAGAAAGGGT...AAGTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTTGTTTGCTTCTTGTCTaGTTGACAGGAGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSCLLLV*LTGGPK
Trigger: TTTAGGGCCTCCTGTCAATCAGACAAGAAGCAAACA...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATAAGCTGGAACAGCTATaGTATGCACATATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYKLEQL*YAHIFP
Trigger: GGGAAAAATATGTGCATATCATAGCTGTTCCAGCTT...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp CTGCTTTCCGACGTGGTAGGTGTGGATGTTGCTGCTAAACCTTGGGTAAAATGTTTGTGGGCCTGTTTATaGTCAGGATTGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLSDVVGVDVAAKPWVKCLWACL*SGLSWK
Trigger: TTTCCAAGACAATCCTGAGCATAAACAGGCCCACAA...ACATTTTACCCAAGGTTTAGCAGCAACATCCACACCTACCACGTCGGAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGGATATTTATCCTTTTaGACTTCAGGCAACGACATT +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMGYLSF*TSGNDI
Trigger: AATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCC...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTTTGGGATTCCATTCCTaGGATCAATATCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPLGFHS*DQYRIS
Trigger: AGAAATACGATATTGATCCCAGGAATGGAATCCCAA...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp ATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCTTGGGATTCCATTCCTaGGATCAATATCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: MVLGGKAIGRRLGHETRALGFHS*DQYRIS
Trigger: AGAAATACGATATTGATCCCAGGAATGGAATCCCAA...GGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCCTTTACTCTGTTCTaGGTACATATATGGATTGTC +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYAFTLF*VHIWIV
Trigger: GACAATCCATATATGTACCCAGAACAGAGTAAAGGC...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp TCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGATTGTATTGATCCTGCTTTGTaGAAGCCTTTACTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SPECSQHMFCGPVYAQDCIDPAL*KPLLCS
Trigger: AGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAAT...ACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTCCTTAATATATTTATaGTGTAGGACTCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMSLIYL*CRTPSF
Trigger: GAAGGAGGGAGTCCTACACCATAAATATATTAAGGA...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATCATATTTTTCCCATGTaGCCTTTCTCTATGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYHIFPM*PFSMPL
Trigger: CAAAGGCATAGAGAAAGGCCACATGGGAAAAATATG...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp CTGGGATCAATATCGTATTTCTTTCTCCCAAAGCACTaGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LGSISYFFLPKH*STVLSDRDLLL
Trigger: CAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAAAGAAATACGATATTGATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp GGACGATGCCCATCTTTCGTCTGCAACTTAAGCAGGCTGAATTCCTCAGGATATTTCATAAGGCACTATTaGAAAATTCACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRCPSFVCNLSRLNSSGYFIRHY*KIHWWE
Trigger: CTCCCACCAGTGAATTTTTCAATAGTGCCTTATGAA...ATATCCTGAGGAATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCATCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATATGATAGAATCTATGTaGAGGATATGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYMIESM*RICRCL
Trigger: CAAACACCTGCATATCCTTCACATAGATTCTATCAT...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR TCA 90 bp CATGCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACATATGAAGGTGCCATaGATGCATTGTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: HAHVIDMWSLSMDPNLFPHMKVP*MHCGFC
Trigger: ACAAAAACCACAATGCATTCATGGCACCTTCATATG...TGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp GCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACTTAAGGGTTACAATATCTaGCACTCACTCTCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: AHVIDMWSLSMDPNLFPLKGYNI*HSLSKS
Trigger: ACTCTTTGAGAGTGAGTGGCAGATATTGTAACCCTT...AAGTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR GCA 90 bp AGAGGATTAGCACGGATGTATGCTGATGTTAACCCAAGGAGTGGTCAGGCACAGGGAACAGCTATGATATaGACATATTTTTCCCATGTG +
Preference number: 4 (lower is better)
Translates to: RGLARMYADVNPRSGQAQGTAMI*TYFSHV
Trigger: CACATGGGAAAAATATGTGCATATCATAGCTGTTCC...CTGTGCCTGACCACTCCTTGGGTTAACATCAGCATACATCCGTGCTAATCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATTTGGGATTCCATTCCTaGGATCAATATCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYLGFHS*DQYRIS
Trigger: AGAAATACGATATTGATCCCAGGAATGGAATCCCAA...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CCA 90 bp GGACGATGCCCATCTTTCGTCTGCAACTTAAGCAGGCTGAATTCCTCAGGATATCAGAGGGTGTTGTGTTaGCAAAACATCCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: GRCPSFVCNLSRLNSSGYQRVLC*QNIPFI
Trigger: AATAAAAGGGATGTTTTGCCAACACAACACCCTCTG...ATATCCTGAGGAATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCATCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTATAGTATTACTTACCTaGTATAGATCCAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: INWKRVARVQSAHVLWACIVLLT*YRSSLH
Trigger: ATGAAGGCTGGATCTATACCAGGTAAGTAATACTAT...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp ACATGTTTTGTGGGCCTGTTTATGCTCAGGATTGTCTaGGAAAGTCCAAAGCACCAGAAAGGTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: TCFVGLFMLRIV*ESPKHQKGVAC
Trigger: ACATGCTACACCTTTCTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTTTCATAAGGCACTATTaGAAAATTCACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSFIRHY*KIHWWE
Trigger: CTCCCACCAGTGAATTTTTCAATAGTGCCTTATGAA...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CCA 90 bp GGTGGGAGCATTGATCCTGCTTTGTGGAAGCCTTTACTCTGTTCTGGGTACATATTGGGATTCCATTCCTaGGATCAATATCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: GGSIDPALWKPLLCSGYILGFHS*DQYRIS
Trigger: AGAAATACGATATTGATCCCAGGAATGGAATCCCAA...TATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR GCA 90 bp ATCCTGCTTTGTGGAAGCCTTTACTCTGTTCTGGGTACATATATGGATTGTCGCATTTATGAGACTCTCTaGTTTGGTGGTGCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: ILLCGSLYSVLGTYMDCRIYETL*FGGALV
Trigger: TACAAGAGCACCACCAAAGCAGAGAGTCTCATAAAT...GCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp AGGATATTTATCCTTTTGGACTTCAGGCAACGACATTTCAGAGGAGTGATCAGATCAGCACATGTTTTGTaGGCCTGTTTATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RIFILLDFRQRHFRGVIRSAHVL*ACLCSG
Trigger: TCCTGAGCATAAACAGGCCCACAAAACATGTGCTGA...TCTGATCACTCCTCTGAAATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CCA 90 bp TTTTGTTCTATATTGTGTCCTCCATTACTAACCCACCTGGTGGTTGCAGTTGACGAAGTTAATGTGTCCTaGAAAATCTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FCSILCPPLLTHLVVAVDEVNVS*KISWQP
Trigger: AGGCTGCCAAGAGATTTTCCAGGACACATTAACTTC...GTCAACTGCAACCACCAGGTGGGTTAGTAATGGAGGACACAATATAGAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp CTGGGTACATATATGGATTGTCGCCTGGAGTTAACTTaGGGATTCCATTCCTGGGATCAATATCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LGTYMDCRLELT*GFHSWDQYRIS
Trigger: AGAAATACGATATTGATCCCAGGAATGGAATCCCAAAGTTAACTCCAGGCGACAATCCATATATGTACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR TCA 90 bp TTTTGTTCTATATTGTGTCCTCCATTACTAACCCACCTGGTGGTTGCAGTTGACTTTTACCAAAAGCAATaGAAGTTCACTGCTATGGTC +
Preference number: 4 (lower is better)
Translates to: FCSILCPPLLTHLVVAVDFYQKQ*KFTAMV
Trigger: GACCATAGCAGTGAACTTTCATTGCTTTTGGTAAAA...GTCAACTGCAACCACCAGGTGGGTTAGTAATGGAGGACACAATATAGAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp ATTGAAAAATTCACTGGTGGGAGCATTGATCCTGCTTaGTGGAAGCCTTTACTCTGTTCTGGGTACATATAT +
Preference number: 4 (lower is better)
Translates to: IEKFTGGSIDPA*WKPLLCSGYIY
Trigger: ATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGAATTTTTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506468.1
3UTR CAA 72 bp GTGTTAAATTCTGTGAGTTTGGTATTTGTGTTGTGGTaGTTAGACAACATCCTTGACCTTAGAAGATACATG +
Preference number: 4 (lower is better)
Translates to: VLNSVSLVFVLW*LDNILDLRRYM
Trigger: CATGTATCTTCTAAGGTCAAGGATGTTGTCTAACAACCACAACACAAATACCAAACTCACAGAATTTAACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp TTCCCAGCCTCCAGAACTGTAAGAAATGAATTCCTATaGTTTATAAGCCATTCTGTTTATGGCGTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: FPASRTVRNEFL*FISHSVYGVLL
Trigger: TAACAAAACGCCATAAACAGAATGGCTTATAAACAATAGGAATTCATTTCTTACAGTTCTGGAGGCTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
3UTR CAA 72 bp TTATCAGTGTTAAATTCTGTGAGTTTGGTATTTGTGTaGTGGTTGTTAGACAACATCCTTGACCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSVLNSVSLVFV*WLLDNILDLRR
Trigger: TCTTCTAAGGTCAAGGATGTTGTCTAACAACCACAACACAAATACCAAACTCACAGAATTTAACACTGATAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS CCA 90 bp GGAGCCTTACTCCCTCCACCTGGGCGTTTCGTGGTTTGGAAGCCCTaGGAGCCCCAGCGAGTCCGCCCCCAGCCCGAACCAGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: GALLPPPGRFVVWKP*EPQRVRPQPEPGSL
Trigger: CAGCGAGCCTGGTTCGGGCTGGGGGCGGACTCGCTGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTGGAGGGAGTAAGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS CCA 90 bp GGAGGGCAGGACTGGCCTCTAAACGGGAGCCTTACTCCCTCCACCTaGGCGTTTCGTGGTTTGGAAGCCCTGGGAGCCCCAGCGAGTCCG +
Preference number: 5 (lower is better)
Translates to: GGQDWPLNGSLTPST*AFRGLEALGAPASP
Trigger: CGGACTCGCTGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTGGAGGGAGTAAGGCTCCCGTTTAGAGGCCAGTCCTGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR CAA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGGGCGTTTCGTGGTTaGGAAGCCCTGGGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLWAFRG*EALGAP
Trigger: TGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCA...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR CAA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTGCCGCAGGTCGTGCTaGAGATGGAGGGGAGACGGC +
Preference number: 5 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMCRRSC*RWRGDG
Trigger: GCCGTCTCCCCTCCATCTCAAGCACGACCTGCGGCA...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGCCAGCACCCTGCGCTaGGACTTCCCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: INWKRVARVQSAHVLWACASTLR*DFPASR
Trigger: TCTGGAGGCTGGGAAGTCCAAGCGCAGGGTGCTGGC...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp AAGGTGATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCTGCCGCAGGTCGTGCTaGAGATGGAGGGGAGACGGC +
Preference number: 5 (lower is better)
Translates to: KVMVLGGKAIGRRLGHETCRRSC*RWRGDG
Trigger: GCCGTCTCCCCTCCATCTCAAGCACGACCTGCGGCA...GGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCATCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS CCA 90 bp AAACAAACAAATTCCACAAGCCACCGAAAGTCAGGAGGGCAGGACTaGCCTCTAAACGGGAGCCTTACTCCCTCCACCTGGGCGTTTCGT +
Preference number: 5 (lower is better)
Translates to: KQTNSTSHRKSGGQD*PLNGSLTPSTWAFR
Trigger: ACGAAACGCCCAGGTGGAGGGAGTAAGGCTCCCGTTTAGAGGCCAGTCCTGCCCTCCTGACTTTCGGTGGCTTGTGGAATTTGTTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS-3UTR CAA 90 bp GTAAGCAGACACTCTGGGGAGGCCAGGAGGCTCACTGACACTTGGGCCTGTTTCATGCTCAGGATTGTCTaGGAAAGTCCAAAGCACCAG +
Preference number: 5 (lower is better)
Translates to: VSRHSGEARRLTDTWACFMLRIV*ESPKHQ
Trigger: CTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCAT...GAAACAGGCCCAAGTGTCAGTGAGCCTCCTGGCCTCCCCAGAGTGTCTGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp ATCCTGCTTTGTGGAAGCCTTTACTCTGTTCTGGGTACATATATGGATTGTCGCTGCCGCAGGTCGTGCTaGAGATGGAGGGGAGACGGC +
Preference number: 5 (lower is better)
Translates to: ILLCGSLYSVLGTYMDCRCRRSC*RWRGDG
Trigger: GCCGTCTCCCCTCCATCTCAAGCACGACCTGCGGCA...GCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCTTCCACAAAGCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp CTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGAGGGAGGAACTGACACTTTaGCCAGAGGGTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LPKHLSTVLSDRDLLLPREELTL*PEGVVL
Trigger: CAACACAACACCCTCTGGCAAAAGTGTCAGTTCCTC...CCTCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp TCTTGGGTCACTGCAAGCTCCGCCTCCCAGGTTGACACCATTCTCCTGCCTCAGAGCATTGATCCTGCTTaGTGGAAGCCTTTACTCTGT +
Preference number: 5 (lower is better)
Translates to: SWVTASSASQVDTILLPQSIDPA*WKPLLC
Trigger: ACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCT...CTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAGTGACCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTCACTGGTGGGAGCATaGATCCTGCTTTGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLSLVGA*ILLCGS
Trigger: GCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGA...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTACTGCTGGCTGCCAGTaGTCAAGCTCCTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: STGKGSPECSQHMFCGPVTAGCQ*SSSSTS
Trigger: AGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGT...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTCTCCCAAAGCACTaGTCCACCGTCCTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLFLPKH*STVLSD
Trigger: ATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAAA...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTCACTGGTGGGAGCATaGATCCTGCTTTGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: STGKGSPECSQHMFCGPVSLVGA*ILLCGS
Trigger: GCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGA...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAACTGCTGGCTGCCAGTaGTCAAGCTCCTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: NWKRVARVQSAHVLWACLTAGCQ*SSSSTS
Trigger: AGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGT...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATACTGCTGGCTGCCAGTaGTCAAGCTCCTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYTAGCQ*SSSSTS
Trigger: AGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGT...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp GCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACTTTGCAGTGGCACAATCTaGGGTCACTGCAAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: AHVIDMWSLSMDPNLFPLCSGTI*GHCKLR
Trigger: GCGGAGCTTGCAGTGACCCAAGATTGTGCCACTGCA...AAGTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACATCATGCTGTCCAAAGTaGGCAGTGGAACTCTACCTG +
Preference number: 5 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTSCCPK*AVELYL
Trigger: CAGGTAGAGTTCCACTGCCAACTTTGGACAGCATGA...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTTGCCAGAGGGTGTaGTGTTGGCAAAACATCCCT +
Preference number: 5 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLFCQRV*CWQNIP
Trigger: AGGGATGTTTTGCCAACACAACACCCTCTGGCAAAA...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGAGGAACTGACACTTTaGCCAGAGGGTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMEELTL*PEGVVL
Trigger: CAACACAACACCCTCTGGCAAAAGTGTCAGTTCCTC...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTCTGATAGAGACCTCTaGTTGCCGAGGAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: INWKRVARVQSAHVLWACSDRDL*LPRKTP
Trigger: TGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGA...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTCTGATAGAGACCTCTaGTTGCCGAGGAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMSDRDL*LPRKTP
Trigger: TGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGA...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATCACTGGTGGGAGCATaGATCCTGCTTTGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: NWKRVARVQSAHVLWACLSLVGA*ILLCGS
Trigger: GCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGA...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTACCCAGAAAGGCAAGTaGGGAATTTGTGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: INWKRVARVQSAHVLWACTQKGK*GICGRG
Trigger: GCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGGT...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTACCCAGAAAGGCAAGTaGGGAATTTGTGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: STGKGSPECSQHMFCGPVTQKGK*GICGRG
Trigger: GCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGGT...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TTCTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGAACCCAGAAAGGCAAGTaGGGAATTTGTGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: FSQSTCPPSSLIETSCCRTQKGK*GICGRG
Trigger: GCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGGT...TCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp ATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCACCCAGAAAGGCAAGTaGGGAATTTGTGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: MVLGGKAIGRRLGHETRATQKGK*GICGRG
Trigger: GCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGGT...GGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGATGCTCAGGATTGTCTaGGAAAGTCCAAAGCACCAG +
Preference number: 5 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLMLRIV*ESPKHQ
Trigger: CTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCAT...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TCTTGGGTCACTGCAAGCTCCGCCTCCCAGGTTGACACCATTCTCCTGCCTCAGTTCCACTTTAAGGTTTaGGAGATACTAGATCTGCAG +
Preference number: 5 (lower is better)
Translates to: SWVTASSASQVDTILLPQFHFKV*EILDLQ
Trigger: CTGCAGATCTAGTATCTCCAAAACCTTAAAGTGGAA...CTGAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGCTTGCAGTGACCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp TTTTGTTCTATATTGTGTCCTCCATTACTAACCCACCTGGTGGTTGCAGTTGACGCTCCGCCTCCCAGGTaGACACCATTCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FCSILCPPLLTHLVVAVDAPPPR*TPFSCL
Trigger: GAGGCAGGAGAATGGTGTCAACCTGGGAGGCGGAGC...GTCAACTGCAACCACCAGGTGGGTTAGTAATGGAGGACACAATATAGAACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTTTTGCCAGAGGGTGTaGTGTTGGCAAAACATCCCT +
Preference number: 5 (lower is better)
Translates to: STGKGSPECSQHMFCGPVFCQRV*CWQNIP
Trigger: AGGGATGTTTTGCCAACACAACACCCTCTGGCAAAA...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TTCTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGATTTTGCCAGAGGGTGTaGTGTTGGCAAAACATCCCT +
Preference number: 5 (lower is better)
Translates to: FSQSTCPPSSLIETSCCRFCQRV*CWQNIP
Trigger: AGGGATGTTTTGCCAACACAACACCCTCTGGCAAAA...TCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGAGGAACTGACACTTTaGCCAGAGGGTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYEELTL*PEGVVL
Trigger: CAACACAACACCCTCTGGCAAAAGTGTCAGTTCCTC...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTGATAGAGACCTCTTGTaGCCGAGGAAGACTCCATTA +
Preference number: 5 (lower is better)
Translates to: INWKRVARVQSAHVLWACDRDLL*PRKTPL
Trigger: TAATGGAGTCTTCCTCGGCAACAAGAGGTCTCTATC...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp AGTGATCAGAATGTGAGAAGGAGAGTTTCCGATCCAAGTCAGCAGTGGTGTCTAACTGCTGGCTGCCAGTaGTCAAGCTCCTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: SDQNVRRRVSDPSQQWCLTAGCQ*SSSSTS
Trigger: AGAGGTTGAGGAGCTTGACAACTGGCAGCCAGCAGT...TAGACACCACTGCTGACTTGGATCGGAAACTCTCCTTCTCACATTCTGATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp CTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGAGGTGTTTATGCTCAGGATaGTCTTGGAAAGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: LPKHLSTVLSDRDLLLPRCLCSG*SWKVQS
Trigger: GCTTTGGACTTTCCAAGACAATCCTGAGCATAAACA...CCTCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTCAGTCAGCACATGTTTaGTGGGCCTGTTTATGCTCA +
Preference number: 5 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPQSAHV*WACLCS
Trigger: TGAGCATAAACAGGCCCACAAAACATGTGCTGACTG...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATCCAGAGGGTGTTGTGTaGGCAAAACATCCCTTAGAT +
Preference number: 5 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYPEGVV*AKHPLD
Trigger: ATCTAAGGGATGTTTTGCCAACACAACACCCTCTGG...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000674044.1
CDS-3UTR CAA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATTTTTGCCAGAGGGTGTaGTGTTGGCAAAACATCCCT +
Preference number: 5 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYFCQRV*CWQNIP
Trigger: AGGGATGTTTTGCCAACACAACACCCTCTGGCAAAA...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAGATAGAGACCTCTTGTaGCCGAGGAAGACTCCATTA +
Preference number: 5 (lower is better)
Translates to: NWKRVARVQSAHVLWACLDRDLL*PRKTPL
Trigger: TAATGGAGTCTTCCTCGGCAACAAGAGGTCTCTATC...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCCTCATGGGGTACATATATGGATaGTCGCCTGGAGTTAACTTT +
Preference number: 5 (lower is better)
Translates to: LGGKAIGRRLGHETRALMGYIYG*SPGVNF
Trigger: AAAGTTAACTCCAGGCGACAATCCATATATGTACCC...CATGAGGGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTAGCATTGATCCTGCTTaGTGGAAGCCTTTACTCTGT +
Preference number: 5 (lower is better)
Translates to: INWKRVARVQSAHVLWACSIDPA*WKPLLC
Trigger: ACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCT...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAATGCTCAGGATTGTCTaGGAAAGTCCAAAGCACCAG +
Preference number: 5 (lower is better)
Translates to: NWKRVARVQSAHVLWACLMLRIV*ESPKHQ
Trigger: CTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCAT...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp GGACACAGCAAGAAGGTACTATCTATGAGCCAGAAGGCTGGCCCTCAGCAGACATGTTTATGCTCAGGATaGTCTTGGAAAGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: GHSKKVLSMSQKAGPQQTCLCSG*SWKVQS
Trigger: GCTTTGGACTTTCCAAGACAATCCTGAGCATAAACA...TGTCTGCTGAGGGCCAGCCTTCTGGCTCATAGATAGTACCTTCTTGCTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATCAGTCAGCACATGTTTaGTGGGCCTGTTTATGCTCA +
Preference number: 5 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYQSAHV*WACLCS
Trigger: TGAGCATAAACAGGCCCACAAAACATGTGCTGACTG...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTCCAGAGGGTGTTGTGTaGGCAAAACATCCCTTTTAT +
Preference number: 5 (lower is better)
Translates to: INWKRVARVQSAHVLWACPEGVV*AKHPFY
Trigger: ATAAAAGGGATGTTTTGCCAACACAACACCCTCTGG...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTTCTGATAGAGACCTCTaGTTGCCGAGGAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSSDRDL*LPRKTP
Trigger: TGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGA...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp ACATCCCTTTTATTAACCCAAGCACTGGGCAGGTCAAATCTCTGGCTCCCTTTATTTCTCCCAAAGCACTaGTCCACCGTCCTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: TSLLLTQALGRSNLWLPLFLPKH*STVLSD
Trigger: ATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAAA...TAAAGGGAGCCAGAGATTTGACCTGCCCAGTGCTTGGGTTAATAAAAGGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp TTCTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGAGGGTACATATATGGATaGTCGCCTGGAGTTAACTTT +
Preference number: 5 (lower is better)
Translates to: FSQSTCPPSSLIETSCCRGYIYG*SPGVNF
Trigger: AAAGTTAACTCCAGGCGACAATCCATATATGTACCC...TCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATAGCATTGATCCTGCTTaGTGGAAGCCTTTACTCTGT +
Preference number: 5 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYSIDPA*WKPLLC
Trigger: ACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCT...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp CTCCCAAAGCACTTGTCCACCGTCCTCTCTGATAGAGACCTCTTGTTGCCGAGGTTTCATAAGGCACTATaGAAAAATTCACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LPKHLSTVLSDRDLLLPRFHKAL*KNSLVG
Trigger: TCCCACCAGTGAATTTTTCAATAGTGCCTTATGAAA...CCTCGGCAACAAGAGGTCTCTATCAGAGAGGACGGTGGACAAGTGCTTTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTGTTTATGCTCAGGATaGTCTTGGAAAGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: STGKGSPECSQHMFCGPVCLCSG*SWKVQS
Trigger: GCTTTGGACTTTCCAAGACAATCCTGAGCATAAACA...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp GCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACTTCAGTCAGCACATGTTTaGTGGGCCTGTTTATGCTCA +
Preference number: 5 (lower is better)
Translates to: AHVIDMWSLSMDPNLFPLQSAHV*WACLCS
Trigger: TGAGCATAAACAGGCCCACAAAACATGTGCTGACTG...AAGTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp ATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCGGTGCCATGAATGCATaGTGGTTTTTGTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: MVLGGKAIGRRLGHETRAGAMNA*WFLFAS
Trigger: AGAAGCAAACAAAAACCACAATGCATTCATGGCACC...GGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGACCACGCCCAGCCGGTaGTTTTCCTTAATATATTTA +
Preference number: 5 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMTTPSR*FSLIYL
Trigger: TAAATATATTAAGGAAAACAACCGGCTGGGCGTGGT...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp TCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTAGGATATTTATCCTTTaGGACTTCAGGCAACGACAT +
Preference number: 5 (lower is better)
Translates to: STGKGSPECSQHMFCGPVRIFIL*DFRQRH
Trigger: ATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCCT...AACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTAGGATATTTATCCTTTaGGACTTCAGGCAACGACAT +
Preference number: 5 (lower is better)
Translates to: INWKRVARVQSAHVLWACRIFIL*DFRQRH
Trigger: ATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCCT...ACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ATGGTATTAGGAGGTAAGGCCATTGGGAGGCGATTAGGTCATGAGACCAGAGCCAGGATATTTATCCTTTaGGACTTCAGGCAACGACAT +
Preference number: 5 (lower is better)
Translates to: MVLGGKAIGRRLGHETRARIFIL*DFRQRH
Trigger: ATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCCT...GGCTCTGGTCTCATGACCTAATCGCCTCCCAATGGCCTTACCTCCTAATACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp TTTTGTGGGCCTGTTTATGCTCAGGATTGTCTTGGAAAGTCCAAAGCACCAGAATCTGATAGAGACCTCTaGTTGCCGAGGAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: FCGPVYAQDCLGKSKAPESDRDL*LPRKTP
Trigger: TGGAGTCTTCCTCGGCAACAAGAGGTCTCTATCAGA...TTCTGGTGCTTTGGACTTTCCAAGACAATCCTGAGCATAAACAGGCCCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTAGGGTACATATATGGATaGTCGCCTGGAGTTAACTTT +
Preference number: 5 (lower is better)
Translates to: NWKRVARVQSAHVLWACLGYIYG*SPGVNF
Trigger: AAAGTTAACTCCAGGCGACAATCCATATATGTACCC...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGGGTACATATATGGATaGTCGCCTGGAGTTAACTTT +
Preference number: 5 (lower is better)
Translates to: TGKGSPECSQHMFCGPVYGYIYG*SPGVNF
Trigger: AAAGTTAACTCCAGGCGACAATCCATATATGTACCC...ATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp GGACGATGCCCATCTTTCGTCTGCAACTTAAGCAGGCTGAATTCCTCAGGATATAGCATTGATCCTGCTTaGTGGAAGCCTTTACTCTGT +
Preference number: 5 (lower is better)
Translates to: GRCPSFVCNLSRLNSSGYSIDPA*WKPLLC
Trigger: ACAGAGTAAAGGCTTCCACAAAGCAGGATCAATGCT...ATATCCTGAGGAATTCAGCCTGCTTAAGTTGCAGACGAAAGATGGGCATCGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp AGCCTTTACTCTGTTCTGGGTACATATATGGATTGTCGCCTGGAGTTAACTTTGTCACTGGTGGGAGCATaGATCCTGCTTTGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SLYSVLGTYMDCRLELTLSLVGA*ILLCGS
Trigger: GCTTCCACAAAGCAGGATCAATGCTCCCACCAGTGA...CAAAGTTAACTCCAGGCGACAATCCATATATGTACCCAGAACAGAGTAAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp CATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTCATAAGGCACTATaGAAAAATTCACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: HQLEKGRQSAVSTCFVGLFHKAL*KNSLVG
Trigger: TCCCACCAGTGAATTTTTCAATAGTGCCTTATGAAA...CAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp AACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTTTATGCTCAGGATaGTCTTGGAAAGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: NWKRVARVQSAHVLWACLCLCSG*SWKVQS
Trigger: GCTTTGGACTTTCCAAGACAATCCTGAGCATAAACA...TAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp TCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGCTCAGGATTGTAGGATATTTATCCTTTaGGACTTCAGGCAACGACAT +
Preference number: 5 (lower is better)
Translates to: SPECSQHMFCGPVYAQDCRIFIL*DFRQRH
Trigger: ATGTCGTTGCCTGAAGTCCAAAAGGATAAATATCCT...ACAATCCTGAGCATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp CTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTGTTTATGTTTCATAAGGCACTATaGAAAAATTCACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LEKGRQSAVSTCFVGLFMFHKAL*KNSLVG
Trigger: TCCCACCAGTGAATTTTTCAATAGTGCCTTATGAAA...CATAAACAGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp ACATCAACTGGAAAAGGGTCGCCAGAGTGCAGTCAGCACATGTTTTGTGGGCCTTTTCATAAGGCACTATaGAAAAATTCACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: TSTGKGSPECSQHMFCGPFHKAL*KNSLVG
Trigger: TCCCACCAGTGAATTTTTCAATAGTGCCTTATGAAA...AGGCCCACAAAACATGTGCTGACTGCACTCTGGCGACCCTTTTCCAGTTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000674044.1
CDS-3UTR CAA 90 bp CCTTTACTCTGTTCTGGGTACATATATGGATTGTCGCCTGGAGTTAACTTTGGGCAGTCAGCACATGTTTaGTGGGCCTGTTTATGCTCA +
Preference number: 5 (lower is better)
Translates to: PLLCSGYIYGLSPGVNFGQSAHV*WACLCS
Trigger: TGAGCATAAACAGGCCCACAAAACATGTGCTGACTG...CCCAAAGTTAACTCCAGGCGACAATCCATATATGTACCCAGAACAGAGTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS CCA 90 bp AAAACATCCCTTTTATTAACCCAAGCACTGGGCAGGTCAAATCTCTaGCTCCCTTTACTCATAGGTAATATACTTCTCCACTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: KTSLLLTQALGRSNL*LPLLIGNILLHCCE
Trigger: CTCACAGCAGTGGAGAAGTATATTACCTATGAGTAAAGGGAGCCAGAGATTTGACCTGCCCAGTGCTTGGGTTAATAAAAGGGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp GGAGTTAACTTTGGGATTCCATTCCTGGGATCAATATCGTATTTCTTTCTCCCAGATAGAGACCTCTTGTaGCCGAGGAAGACTCCATTA +
Preference number: 5 (lower is better)
Translates to: GVNFGIPFLGSISYFFLPDRDLL*PRKTPL
Trigger: TAATGGAGTCTTCCTCGGCAACAAGAGGTCTCTATC...TGGGAGAAAGAAATACGATATTGATCCCAGGAATGGAATCCCAAAGTTAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506468.1
CDS-3UTR CAA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTAGGATATGCAGGTGTTaGTTGTACAATTCTTGCAAC +
Preference number: 5 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSRICRC*LYNSCN
Trigger: GTTGCAAGAATTGTACAACAAACACCTGCATATCCT...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp GAACCTTCTGAGAGCAGTTTCCTGTGCCACCTAGATAATCTCACCAGGAAATCTGTATTTGTGTTGTGGTaGTTAGACAACATCCTTGAC +
Preference number: 5 (lower is better)
Translates to: EPSESSFLCHLDNLTRKSVFVLW*LDNILD
Trigger: GTCAAGGATGTTGTCTAACAACCACAACACAAATAC...AGATTTCCTGGTGAGATTATCTAGGTGGCACAGGAAACTGCTCTCAGAAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS-3UTR CAA 90 bp GCTCATGTCATAGACATGTGGAGTCTCAGCATGGACCCCAATCTCTTTCCACTTAGTTTGGTATTTGTGTaGTGGTTGTTAGACAACATC +
Preference number: 5 (lower is better)
Translates to: AHVIDMWSLSMDPNLFPLSLVFV*WLLDNI
Trigger: GATGTTGTCTAACAACCACAACACAAATACCAAACT...AAGTGGAAAGAGATTGGGGTCCATGCTGAGACTCCACATGTCTATGACATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS CCA 72 bp CTCCCTCCACCTGGGCGTTTCGTGGTTTGGAAGCCCTaGGAGCCCCAGCGAGTCCGCCCCCAGCCCGAACCA +
Preference number: 6 (lower is better)
Translates to: LPPPGRFVVWKP*EPQRVRPQPEP
Trigger: TGGTTCGGGCTGGGGGCGGACTCGCTGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTGGAGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS CCA 72 bp GGAGCCTTACTCCCTCCACCTGGGCGTTTCGTGGTTTaGAAGCCCTGGGAGCCCCAGCGAGTCCGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: GALLPPPGRFVV*KPWEPQRVRPQ
Trigger: CTGGGGGCGGACTCGCTGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTGGAGGGAGTAAGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS CAA 72 bp GGGAGCCTTACTCCCTCCACCTGGGCGTTTCGTGGTTaGGAAGCCCTGGGAGCCCCAGCGAGTCCGCCCCCA +
Preference number: 6 (lower is better)
Translates to: GSLTPSTWAFRG*EALGAPASPPP
Trigger: TGGGGGCGGACTCGCTGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTGGAGGGAGTAAGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS CAA 90 bp CCTCTAAACGGGAGCCTTACTCCCTCCACCTGGGCGTTTCGTGGTTaGGAAGCCCTGGGAGCCCCAGCGAGTCCGCCCCCAGCCCGAACC +
Preference number: 6 (lower is better)
Translates to: PLNGSLTPSTWAFRG*EALGAPASPPPART
Trigger: GGTTCGGGCTGGGGGCGGACTCGCTGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTGGAGGGAGTAAGGCTCCCGTTTAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS CAA 72 bp CTGGAACCTTCTCCAGCTGTCTGCCGCAGGTCGTGCTaGAGATGGAGGGGAGACGGCAGCCCCGTGGACTGT +
Preference number: 6 (lower is better)
Translates to: LEPSPAVCRRSC*RWRGDGSPVDC
Trigger: ACAGTCCACGGGGCTGCCGTCTCCCCTCCATCTCAAGCACGACCTGCGGCAGACAGCTGGAGAAGGTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000515220.5
ENST00000674044.1
CDS TCA 72 bp TGGAACCTTCTCCAGCTGTCTGCCGCAGGTCGTGCTTaGGATGGAGGGGAGACGGCAGCCCCGTGGACTGTT +
Preference number: 6 (lower is better)
Translates to: WNLLQLSAAGRA*DGGETAAPWTV
Trigger: AACAGTCCACGGGGCTGCCGTCTCCCCTCCATCTCAAGCACGACCTGCGGCAGACAGCTGGAGAAGGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288390.2
ENST00000323108.12
ENST00000506468.1
ENST00000515220.5
ENST00000674044.1
CDS CCA 72 bp GACTGGCCTCTAAACGGGAGCCTTACTCCCTCCACCTaGGCGTTTCGTGGTTTGGAAGCCCTGGGAGCCCCA +
Preference number: 6 (lower is better)
Translates to: DWPLNGSLTPST*AFRGLEALGAP
Trigger: TGGGGCTCCCAGGGCTTCCAAACCACGAAACGCCCAGGTGGAGGGAGTAAGGCTCCCGTTTAGAGGCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS GCA 72 bp GTGAGCATGGATGGACTCATCAACTGGCAACTGAACTaGCGAACGCACGCCGCACGCCGAGGCCTGAGAACC +
Preference number: 6 (lower is better)
Translates to: VSMDGLINWQLN*RTHAARRGLRT
Trigger: GGTTCTCAGGCCTCGGCGTGCGGCGTGCGTTCGGCAGTTCAGTTGCCAGTTGATGAGTCCATCCATGCTCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323108.12
ENST00000515220.5
CDS GCA 72 bp GGATGGACTCATCAACGAACCAACTGGCAACTGAACTaGCGAACGCACGCCGCACGCCGAGGCCTGAGAACC +
Preference number: 6 (lower is better)
Translates to: GWTHQRTNWQLN*RTHAARRGLRT
Trigger: GGTTCTCAGGCCTCGGCGTGCGGCGTGCGTTCGGCAGTTCAGTTGCCAGTTGGTTCGTTGATGAGTCCATCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS TCA 72 bp TGGAGGGGAGACGGCAGCCCCGTGGACTGTTTCCAGTaGGCATGGATGGACTCATCAACGAACCAACTGGCA +
Preference number: 6 (lower is better)
Translates to: WRGDGSPVDCFQ*AWMDSSTNQLA
Trigger: TGCCAGTTGGTTCGTTGATGAGTCCATCCATGCTCACTGGAAACAGTCCACGGGGCTGCCGTCTCCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674044.1
CDS CCA 72 bp AATTCCACAAGCCACCGAAAGTCAGGAGGGCAGGACTaGCCTCTAAACGGGAGCCTTACTCCCTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: NSTSHRKSGGQD*PLNGSLTPSTW
Trigger: CCAGGTGGAGGGAGTAAGGCTCCCGTTTAGAGGCCAGTCCTGCCCTCCTGACTTTCGGTGGCTTGTGGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288390.2
CDS TCA 72 bp TGGAGGGGAGACGGCAGCCCCGTGGACTGTTTCCAGTaGGCATGGATGGACTCATCTGTGCCCATGATGATT +
Preference number: 6 (lower is better)
Translates to: WRGDGSPVDCFQ*AWMDSSVPMMI
Trigger: AATCATCATGGGCACAGATGAGTCCATCCATGCTCACTGGAAACAGTCCACGGGGCTGCCGTCTCCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288390.2
ENST00000506468.1
CDS CCA 72 bp CTTTTATTAACCCAAGCACTGGGCAGGTCAAATCTCTaGCTCCCTTTACTCATAGGTAATATACTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: LLLTQALGRSNL*LPLLIGNILLH
Trigger: GTGGAGAAGTATATTACCTATGAGTAAAGGGAGCCAGAGATTTGACCTGCCCAGTGCTTGGGTTAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506468.1