RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPATC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000186583

Ensembl transcript IDs: ENST00000377470.8, ENST00000447830.2

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGGCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATaGCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCC +
Preference number: 1 (lower is better)
Translates to: RGRPQTPPAPGALAG*HKRSPAARSAQGAP
Trigger: GGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTaGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGCTGAGCGAG +
Preference number: 1 (lower is better)
Translates to: STTQERWHRPSDQCL*EALMAVHRAVGLSE
Trigger: CTCGCTCAGCCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
3UTR CAA 90 bp CGAGCCTGGACCTCCCAGCTCCAGCGTCACCAGATGAACATGGGCTaGCCGTCATCGTGCGCCAGCTGGCTGAGGCAGGAGAGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RAWTSQLQRHQMNMG*PSSCASWLRQESSS
Trigger: GCTGCTGCTCTCCTGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTGGTGACGCTGGAGCTGGGAGGTCCAGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR-3UTR CCA 90 bp CGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTCGCTGTGTGAGCCTCTaGCACAGCTTCTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: RRRACRGARSPPPHAAGSRCVSL*HSFSSS
Trigger: GCTGGATGAGAAGCTGTGCCAGAGGCTCACACAGCG...ACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR-3UTR TCA 90 bp GCGTCACCAGATGAACATGGGCTTGCCGTCATCGTGCGCCAGCTGGCTGAGGCATCACATAGCGCTGTGTaGGCCTCTGGCACAGCTTCT +
Preference number: 2 (lower is better)
Translates to: ASPDEHGLAVIVRQLAEASHSAV*ASGTAS
Trigger: AGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGA...TGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTGGTGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR-3UTR TCA 90 bp CAGATGAACATGGGCTTGCCGTCATCGTGCGCCAGCTGGCTGAGGCAGGAGAGCTCTGCAGCCTGTTCATaGCGCTCACATAGCGCTGTG +
Preference number: 2 (lower is better)
Translates to: QMNMGLPSSCASWLRQESSAACS*RSHSAV
Trigger: CACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGA...GCTCTCCTGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR GCA 72 bp GAGAGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTaGACGGTCTCCACCACCACACGCTGCAGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: ESSSSASASMPG*TVSTTTRCRKS
Trigger: GGACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR GCA 72 bp CCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATaGCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAG +
Preference number: 3 (lower is better)
Translates to: PQTPPAPGALAG*HKRSPAARSAQ
Trigger: CTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR TCA 72 bp AGCGAGCCTGGACCTCCCAGCTCCAGCGTCACCAGATaGACATGGGCTTGCCGTCATCGTGCGCCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: SEPGPPSSSVTR*TWACRHRAPAG
Trigger: GCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTGGTGACGCTGGAGCTGGGAGGTCCAGGCTCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
3UTR CCA 72 bp CAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTaGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: QERWHRPSDQCL*EALMAVHRAVG
Trigger: CCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CCACGGTGTAGGGGCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGAGGAGGGCACTGCACCTaGAGGCTGCCCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PRCRGRPQTPPAPGALAGGGHCT*RLPRAP
Trigger: TGGGGCCCTGGGCAGCCTCCAGGTGCAGTGCCCTCC...TCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGCCCCTACACCGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp GGAGAGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCAGGGGGCTCATGAGTaGGCCCGGTGTGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GEQQQRVGEHAGVHGLHHQGAHE*ARCGAG
Trigger: CCCAGCGCCACACCGGGCTCACTCATGAGCCCCCTG...GTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCTCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CCACGGTGTAGGGGCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATTGGCCAGCAGGTTCTaGGAGACCCCTGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PRCRGRPQTPPAPGALAGLASRF*ETPGGV
Trigger: CACCCCACCAGGGGTCTCTCAGAACCTGCTGGCCAA...TCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGCCCCTACACCGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACGGGACTGGGGCCCAGTaGGGCCTCCGCGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSPAARSAQGAPARCSPDGTGAQ*GLRGVA
Trigger: AGCCACTCCGCGGAGGCCCCACTGGGCCCCAGTCCC...GTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp GGTGTAGGGGCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATGCCGGTGTGGCGCTGGGCTaGAAGCTGGTTAGCATCTCG +
Preference number: 4 (lower is better)
Translates to: GVGAALRRRQLRALSQDAGVALG*KLVSIS
Trigger: CGAGATGCTAACCAGCTTGCAGCCCAGCGCCACACC...GGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGCCCCTACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGGACTGGGGCCCAGTaGGGCCTCCGCGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLGTGAQ*GLRGVA
Trigger: AGCCACTCCGCGGAGGCCCCACTGGGCCCCAGTCCC...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTCTGTCAGGGGGCTCATaGGTGAGCCCGGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RRRACRGARSPPPHAAGSLSGGS*VSPVWR
Trigger: GCGCCACACCGGGCTCACTCATGAGCCCCCTGACAG...ACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACGGCCTGCCACGAGGCTaGTGGGAGTCAGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RSPAARSAQGAPARCSPDGLPRG*WESGCQ
Trigger: CTGGCACCCTGACTCCCAGCAGCCTCGTGGCAGGCC...GTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGGGGCCTCCGCGGAGTaGCTCAGCCAGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QRRVHPPVVAQTLQPVHDGASAE*LSQPQP
Trigger: AGGCTGCGGCTGGCTGAGCCACTCCGCGGAGGCCCC...GTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAGCACCCTGGGCGATGTaGGTGGTGCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ARRRACRGARSPPPHAAGAPWAM*VVLEGV
Trigger: CACACCCTCAAGCACCACCCACATCGCCCAGGGTGC...TCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GGTGTAGGGGCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATGCCCGCTGTGTGAGCCTCTaGCACAGCTTCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GVGAALRRRQLRALSQDARCVSL*HSFSSS
Trigger: GCTGGATGAGAAGCTGTGCCAGAGGCTCACACAGCG...GGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGCCCCTACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGTGCCGGGGCCCGGTaGGCCACCCCAGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HPGALAQAQRPVSVGSFNGAGAR*ATPEEA
Trigger: TGCCTCCTCTGGGGTGGCTCACCGGGCCCCGGCACC...ATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAACATCTCGGCCAGGGGTaGCAAGGCCATGATCCCCAC +
Preference number: 4 (lower is better)
Translates to: RVGEHAGVHGLHHHTLQEHLGQG*QGHDPH
Trigger: GTGGGGATCATGGCCTTGGCACCCCTGGCCGAGATG...TTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTGCGCGTCGGCGAGCATaGCGGGGTGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRVHPPVVAQTLQPVHDAARRRA*RGARSP
Trigger: TGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGC...AGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGACAGCCTTGGGGCCTCTaGCAGGACCAGGTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: ARRRACRGARSPPPHAAGQPWGL*QDQVAH
Trigger: ATGAGCAACCTGGTCCTGCCAGAGGCCCCAAGGCTG...TCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTAGCCAGCCGCAGCCTTaGGGCCTCTGGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLSQPQP*GLWQDQ
Trigger: CTGGTCCTGCCAGAGGCCCCAAGGCTGCGGCTGGCT...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTGGGTACCACGCAAGCTaGGGACTGGGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQLRALSQDAISVHQLLGGYHAS*GLGPSG
Trigger: CCCACTGGGCCCCAGTCCCCAGCTTGCGTGGTACCC...ACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTCATGCTGAGAGGCTCTaGGTCCTGGGTCGACTGGGG +
Preference number: 4 (lower is better)
Translates to: AALRRRQLRALSQDAISVHAERL*VLGRLG
Trigger: CCCCAGTCGACCCAGGACCCAGAGCCTCTCAGCATG...AACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GGAGAGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACAGGAGAAGGCCGTCTTaGGAGCAGGTGTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GEQQQRVGEHAGVHGLHHRRRPS*EQVCPW
Trigger: CCATGGGCACACCTGCTCCCAAGACGGCCTTCTCCT...GTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGGACCACTTGTTCCTaGGCGGCACTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLGTTCS*AALGWA
Trigger: GGCCCAGCCCAGTGCCGCCCAGGAACAAGTGGTCCC...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTGGGGCTGAGCGAGCCTaGACCTCCCAGCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEAGAERA*TSQLQR
Trigger: ACGCTGGAGCTGGGAGGTCCAGGCTCGCTCAGCCCC...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTACCACCCAGGAGCGCTaGCACAGGCCCAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLTTQER*HRPSDQ
Trigger: CTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGT...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCGAGCCCGCCTGCCTaGGTCTTGATCGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: QLLGQRRVHPPVVAQTLQPSPPA*VLIADL
Trigger: CAAGTCAGCGATCAAGACTCAGGCAGGCGGGCTCGG...CTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGGGCTCATGAGTaGGCCCGGTGTGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRAQGAHE*ARCGAG
Trigger: CCCAGCGCCACACCGGGCTCACTCATGAGCCCCCTG...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACGGGCTATCAGGGGGCTaGTCTGGGACATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RSPAARSAQGAPARCSPDGLSGG*SGTWPQ
Trigger: CTGTGGCCATGTCCCAGAGCAGCCCCCTGATAGCCC...GTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGCGCGTCGGCGAGCATaGCGGGGTGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHARRRA*RGARSP
Trigger: TGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTTCGTTTGCCACTGCTaGGGACGGGGGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ASASMPGCTVSTTTRCRKFVCHC*GRGQED
Trigger: GTCTTCCTGCCCCCGTCCCCAGCAGTGGCAAACGAA...CTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGGGCTGCTCTGTGACGTaGGTGCTGGGCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: QLLGQRRVHPPVVAQTLQGCSVT*VLGQTA
Trigger: TGCTGTCTGGCCCAGCACCCACGTCACAGAGCAGCC...CTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTGAGTCAGGGTGCCAGTaGAGGGCAGGCCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RQLRALSQDAISVHQLLGESGCQ*RAGPGN
Trigger: GTTCCCTGGGCCTGCCCTCCACTGGCACCCTGACTC...ACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGGGGCCTCCGCGGAGTaGCTCAGCCAGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRGASAE*LSQPQP
Trigger: AGGCTGCGGCTGGCTGAGCCACTCCGCGGAGGCCCC...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CAGGAGAGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCATAGGGGTGGAGGTCTaGAGGGGTGCTCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: QESSSSASASMPGCTVSTIGVEV*RGAPAN
Trigger: GTTTGCAGGAGCACCCCTCCAGACCTCCACCCCTAT...GGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGGCGGCACTGGGCTaGGCCTGTGTGTCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEAWAALG*ACVSEV
Trigger: CACTTCGGACACACAGGCCCAGCCCAGTGCCGCCCA...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGGGACCACTTGTTCCTaGGCGGCACTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QRRVHPPVVAQTLQPVHDGTTCS*AALGWA
Trigger: GGCCCAGCCCAGTGCCGCCCAGGAACAAGTGGTCCC...GTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp AGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACAGTACGAGGTGGGGAGTaGGCGTTGTGTGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: SSSSASASMPGCTVSTTTVRGGE*ALCGGQ
Trigger: CTGTCCTCCACACAACGCCCACTCCCCACCTCGTAC...TGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp TGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTGGGGCTGAGCGAGCCTaGACCTCCCAGCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CHKRSPAARSAQGAPARCGAERA*TSQLQR
Trigger: ACGCTGGAGCTGGGAGGTCCAGGCTCGCTCAGCCCC...ACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCTGCAAACGCCATGCTaGGAGGCTCTGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGQRRVHPPVVAQTLQPVLQTPC*EALGPG
Trigger: CCCAGGACCCAGAGCCTCTCAGCATGGCGTTTGCAG...AACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGCCCACGGGAGGGCACTaGACCTGGAGGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVPTGGH*TWRLPR
Trigger: CCTGGGCAGCCTCCAGGTGCAGTGCCCTCCCGTGGG...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGCCCACGGGAGGGCACTaGACCTGGAGGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HPPVVAQTLQPVHDAHIAPTGGH*TWRLPR
Trigger: CCTGGGCAGCCTCCAGGTGCAGTGCCCTCCCGTGGG...CGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCGGCCTGCCACGAGGCTaGTGGGAGTCAGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGALAQAQRPVSVGSFNGGLPRG*WESGCQ
Trigger: CTGGCACCCTGACTCCCAGCAGCCTCGTGGCAGGCC...GCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp AGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACAGAGAGACAGCCACCGTaGCCATCACAGGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: SSSSASASMPGCTVSTTTERQPP*PSQGLS
Trigger: TGATAGCCCCTGTGATGGGCACGGTGGCTGTCTCTC...TGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCTGGAGGGGTGCTCCTaGAAACGCCATGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLLGQRRVHPPVVAQTLQLEGCS*KRHAER
Trigger: CCTCTCAGCATGGCGTTTGCAGGAGCACCCCTCCAG...CTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTCAGAGTCTGCAAGGCTaGCCCAGTGGGCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEAQSLQG*PSGPWV
Trigger: TACCCAGGGCCCACTGGGCCAGCCTTGCAGACTCTG...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGGAGGGCACTGCACCTaGAGGCTGCCCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRGGHCT*RLPRAP
Trigger: TGGGGCCCTGGGCAGCCTCCAGGTGCAGTGCCCTCC...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTCATGCCCTGGGGCAGTaGCAAGGGTGCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAHALGQ*QGCGPR
Trigger: CCGTGGGCCGCACCCTTGCCACTGCCCCAGGGCATG...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTAGCCCGGTGTGGCGCTaGGCTGCAAGCTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLSPVWR*AASWLA
Trigger: TGCTAACCAGCTTGCAGCCCAGCGCCACACCGGGCT...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCGTCACCAGATGAACATGGGCTTGCCGTCATCGTGCGCCAGCTGGCTGAGGCAAGCCAGCCGCAGCCTTaGGGCCTCTGGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: ASPDEHGLAVIVRQLAEASQPQP*GLWQDQ
Trigger: CTGGTCCTGCCAGAGGCCCCAAGGCTGCGGCTGGCT...TGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTGGTGACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp AGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACAGGGCTCAGTGGAGAGTaGGACTTTGGTGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSSSASASMPGCTVSTTTGLSGE*DFGGGS
Trigger: ACTGCCACCACCAAAGTCCCACTCTCCACTGAGCCC...TGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp TGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTTGGGCGGCACTGGGCTaGGCCTGTGTGTCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: CHKRSPAARSAQGAPARCWAALG*ACVSEV
Trigger: CACTTCGGACACACAGGCCCAGCCCAGTGCCGCCCA...ACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAATCGTCGACGGTTCTGTaGTGCGTGGACCTCGAGAGT +
Preference number: 4 (lower is better)
Translates to: RVGEHAGVHGLHHHTLQESSTVL*CVDLES
Trigger: ACTCTCGAGGTCCACGCACCACAGAACCGTCGACGA...TTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGTTGCTGGTCTTGCGGTaGGCCAGCTTCCGTTCCACC +
Preference number: 4 (lower is better)
Translates to: QLLGQRRVHPPVVAQTLQLLVLR*ASFRST
Trigger: GGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAA...CTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATCTGTCAGGGGGCTCATaGGTGAGCCCGGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HPGALAQAQRPVSVGSFNLSGGS*VSPVWR
Trigger: GCGCCACACCGGGCTCACTCATGAGCCCCCTGACAG...ATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGAGGGGGCTGCTCTGTaGCGTGGGTGCTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVEGAAL*RGCWAR
Trigger: TCTGGCCCAGCACCCACGTCACAGAGCAGCCCCCTC...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGGAGGGGGCTGCTCTGTaGCGTGGGTGCTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HPPVVAQTLQPVHDAHIAEGAAL*RGCWAR
Trigger: TCTGGCCCAGCACCCACGTCACAGAGCAGCCCCCTC...CGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTGTGTCCGAAGTGTTaGAGGAGAAGGCCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RVGEHAGVHGLHHHTLQEVCPKC*RRRPSW
Trigger: CCAAGACGGCCTTCTCCTTCAACACTTCGGACACAC...TTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGCTGAGCGACAGAGGCAAGGACGGTaGCCGTGGGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PVSVGSFNGRAQGCGAERQRQGR*PWGRWW
Trigger: CCACCACCTCCCCCACGGTCACCGTCCTTGCCTCTG...TCGCTCAGCCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTGATGTGGGTGGTGCTTaGGGGTGTGTAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RQLRALSQDAISVHQLLGDVGGA*GCVAGG
Trigger: GCCACCAGCTACACACCCTCAAGCACCACCCACATC...ACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp TCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGGAGGACTCGTTCGTTTaGCACTGCTGGGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: SQDAISVHQLLGQRRVHPEDSFV*HCWGRG
Trigger: CCCCCGTCCCCAGCAGTGGCAAACGAACGAGTCCTC...CGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp AGCAGCAGCAGCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACATCGACGGTTCTGTGGTaGGTGGACCTCGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSSSASASMPGCTVSTTTSTVLW*VDLESH
Trigger: ATGACTCTCGAGGTCCACGCACCACAGAACCGTCGA...TGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGCTGCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGTTCTCGGGGAACTTaGTGGTCTTGCGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLGSRGT*WSCGGP
Trigger: TGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACC...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTGGTTCTCGGGGAACTTaGTGGTCTTGCGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LGQRRVHPPVVAQTLQPVGSRGT*WSCGGP
Trigger: TGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACC...AACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp GCGTCACCAGATGAACATGGGCTTGCCGTCATCGTGCGCCAGCTGGCTGAGGCAGCGAGCATGCCGGGGTaGACGGTCTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: ASPDEHGLAVIVRQLAEAASMPG*TVSTTT
Trigger: TGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGC...TGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTGGTGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGAGTCAGGGTGCCAGTaGAGGGCAGGCCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHESGCQ*RAGPGN
Trigger: GTTCCCTGGGCCTGCCCTCCACTGGCACCCTGACTC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp ACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGGGTACCACGCAAGCTaGGGACTGGGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TQERWHRPSDQCLWEALMGYHAS*GLGPSG
Trigger: CCCACTGGGCCCCAGTCCCCAGCTTGCGTGGTACCC...CATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTCTTTGGTGGTGGCAGTaGGTACCACGCAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEALWWWQ*VPRKLG
Trigger: CCCCAGCTTGCGTGGTACCCACTGCCACCACCAAAG...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCATTCGGGAAGGGGGATaGGGGGCACCCTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: PGALAQAQRPVSVGSFNGIREGG*GAPWAM
Trigger: CATCGCCCAGGGTGCCCCCCATCCCCCTTCCCGAAT...GCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CTCTCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACATTCGGGAAGGGGGATaGGGGGCACCCTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: LSQDAISVHQLLGQRRVHIREGG*GAPWAM
Trigger: CATCGCCCAGGGTGCCCCCCATCCCCCTTCCCGAAT...GTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTGGAGTGGGCGTTGTGTaGAGGACAGTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RRVHPPVVAQTLQPVHDAGVGVV*RTVGDR
Trigger: CCTGTCCCCCACTGTCCTCCACACAACGCCCACTCC...AGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTCTCGGGGAACTTGCTaGTCTTGCGGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLSRGTC*SCGGPA
Trigger: AGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGA...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
3UTR CAA 72 bp ACCTCCCAGCTCCAGCGTCACCAGATGAACATGGGCTaGCCGTCATCGTGCGCCAGCTGGCTGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TSQLQRHQMNMG*PSSCASWLRQE
Trigger: CTCCTGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTGGTGACGCTGGAGCTGGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp GTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTCACCATTGTTCTGGCGTaGGGAAAGGCCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VGEHAGVHGLHHHTLQEVTIVLA*GKACCC
Trigger: GCAACAGCAGGCCTTTCCTCACGCCAGAACAATGGT...GACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp GCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGTTGGCCAGCAGGTTCTaGGAGACCCCTGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AQRPVSVGSFNGRAQGCGLASRF*ETPGGV
Trigger: CACCCCACCAGGGGTCTCTCAGAACCTGCTGGCCAA...CCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCCTGCAAACGCCATGCTaGGAGGCTCTGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QERWHRPSDQCLWEALMALQTPC*EALGPG
Trigger: CCCAGGACCCAGAGCCTCTCAGCATGGCGTTTGCAG...GGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp GTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATACAGAGGCAAGGACGGTaGCCGTGGGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VHPPVVAQTLQPVHDAHIQRQGR*PWGRWW
Trigger: CCACCACCTCCCCCACGGTCACCGTCCTTGCCTCTG...TATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTTCACATAGCGCTGTGTaGGCCTCTGGCACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RRRACRGARSPPPHAAGSSHSAV*ASGTAS
Trigger: AGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGA...ACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGAAAGGCCTGCTGTTaGCTCACCAAGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLGKACC*LTKPTR
Trigger: ACGAGTGGGCTTGGTGAGGCAACAGCAGGCCTTTCC...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTGGAAAGGCCTGCTGTTaGCTCACCAAGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: RQLRALSQDAISVHQLLGGKACC*LTKPTR
Trigger: ACGAGTGGGCTTGGTGAGGCAACAGCAGGCCTTTCC...ACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACATCTCGGCCAGGGGTaGCAAGGCCATGATCCCCAC +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRAHLGQG*QGHDPH
Trigger: GTGGGGATCATGGCCTTGGCACCCCTGGCCGAGATG...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTGGAGGTGGGGACAGATaGAGGGACCACTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEAGGGDR*RDHLFL
Trigger: CAGGAACAAGTGGTCCCTGCATCTGTCCCCACCTCC...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTGGAGGTGGGGACAGATaGAGGGACCACTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RQLRALSQDAISVHQLLGGGGDR*RDHLFL
Trigger: CAGGAACAAGTGGTCCCTGCATCTGTCCCCACCTCC...ACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp ACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCGAGCATGCCGGGGTaGACGGTCTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: TQERWHRPSDQCLWEALMASMPG*TVSTTT
Trigger: TGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGC...CATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGGCTTGCCGTCATCGTaGGCCAGCTGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAGLPSS*ASWLRQ
Trigger: CTGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCC...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGGGCTTGCCGTCATCGTaGGCCAGCTGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HPPVVAQTLQPVHDAHIAGLPSS*ASWLRQ
Trigger: CTGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCC...CGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGCAAGGCTGGCCCAGTaGGCCCTGGGTATTGTGAGG +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHARLAQ*ALGIVR
Trigger: CCTCACAATACCCAGGGCCCACTGGGCCAGCCTTGC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGCAGGCCCAGGGAACTaGCCAGTGTGCCTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHAGPGN*PVCLLG
Trigger: CCCTAACAGGCACACTGGCCAGTTCCCTGGGCCTGC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CTCTCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACGCAGGCCCAGGGAACTaGCCAGTGTGCCTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LSQDAISVHQLLGQRRVHAGPGN*PVCLLG
Trigger: CCCTAACAGGCACACTGGCCAGTTCCCTGGGCCTGC...GTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACCATGCTGAGAGGCTCTaGGTCCTGGGTCGACTGGGG +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHHAERL*VLGRLG
Trigger: CCCCAGTCGACCCAGGACCCAGAGCCTCTCAGCATG...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTGCTCTGGGAAGATGCTaGACAGGATCCTGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEAALGRC*TGSCGP
Trigger: TGGACCGCAGGATCCTGTCCAGCATCTTCCCAGAGC...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTCCAGCTTGTGGTCACTaGGGTTCAGGGAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLPACGH*GSGKPG
Trigger: TCCAGGCTTCCCTGAACCCCAGTGACCACAAGCTGG...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGATTCTCATCCAGCTTGTaGTCACTGGGGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ARRRACRGARSPPPHAAGFSSSL*SLGFRE
Trigger: TTCCCTGAACCCCAGTGACCACAAGCTGGATGAGAA...TCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTCGCTGTGTGAGCCTCTaGCACAGCTTCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEARCVSL*HSFSSS
Trigger: GCTGGATGAGAAGCTGTGCCAGAGGCTCACACAGCG...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCCAGCTTGTGGTCACTaGGGTTCAGGGAAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RRVHPPVVAQTLQPVHDAPACGH*GSGKPR
Trigger: CCGAGGCTTCCCTGAACCCCAGTGACCACAAGCTGG...AGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCGTGATTCTCCCGAATaGGCCGCACCAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QLLGQRRVHPPVVAQTLQRDSPE*AAPTSS
Trigger: TGAAGAAGTTGGTGCGGCTCATTCGGGAGAATCACG...CTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp GCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTCTGAGTCTTGATCGCTaGCTTGAGCTCGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: AALRRRQLRALSQDAISVLSLDR*LELVIL
Trigger: GAGAATCACGAGCTCAAGTCAGCGATCAAGACTCAG...AACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTCCGAGCCCGCCTGCCTaGGTCTTGATCGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAPSPPA*VLIADL
Trigger: CAAGTCAGCGATCAAGACTCAGGCAGGCGGGCTCGG...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTACCATTGTTCTGGCGTaGGGAAAGGCCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLTIVLA*GKACCC
Trigger: GCAACAGCAGGCCTTTCCTCACGCCAGAACAATGGT...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCATCGTTCGTTTGCCACTaGTGGGGACGGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRASFVCH*WGRGQE
Trigger: TTCCTGCCCCCGTCCCCAGCAGTGGCAAACGAACGA...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGAGGACTCGTTCGTTTaGCACTGCTGGGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHREDSFV*HCWGRG
Trigger: CCCCCGTCCCCAGCAGTGGCAAACGAACGAGTCCTC...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp GCGTCACCAGATGAACATGGGCTTGCCGTCATCGTGCGCCAGCTGGCTGAGGCAGGGAACTGGCCAGTGTaGCTGTTAGGGGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: ASPDEHGLAVIVRQLAEAGNWPV*LLGVPQ
Trigger: TTGCGGGACCCCTAACAGGCACACTGGCCAGTTCCC...TGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTGGTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp ACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGGGCTATCAGGGGGCTaGTCTGGGACATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TQERWHRPSDQCLWEALMGLSGG*SGTWPQ
Trigger: CTGTGGCCATGTCCCAGAGCAGCCCCCTGATAGCCC...CATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTGTTCCACCTCCATCATaGTCTTCGTCGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RRRACRGARSPPPHAAGSVPPPS*SSSTVL
Trigger: CAGAACCGTCGACGAAGAGCATGATGGAGGTGGAAC...ACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGCTGAGCGACTCTCCCAGGCCAGCTaGTTCGACTCTCGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PVSVGSFNGRAQGCGAERLSQAS*FDSRGF
Trigger: GAACCCCCGAGAGTCGAAGCAGCTGGCCTGGGAGAG...TCGCTCAGCCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCCGCGCTCTGGGAAGATaGTGGACAGGATCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: QERWHRPSDQCLWEALMARALGR*WTGSCG
Trigger: ACCGCAGGATCCTGTCCAGCATCTTCCCAGAGCGCG...GGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTGGCGCTCTCGCAGGATaGCATAAGCGTTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: RRVHPPVVAQTLQPVHDAGALAG*HKRSPA
Trigger: AGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCC...AGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCATTCGTTTGCCACTGCTaGGGACGGGGGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRAFVCHC*GRGQED
Trigger: GTCTTCCTGCCCCCGTCCCCAGCAGTGGCAAACGAA...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGCTGAGCGAGGCTGCTCTGTGACGTaGGTGCTGGGCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: PVSVGSFNGRAQGCGAERGCSVT*VLGQTA
Trigger: TGCTGTCTGGCCCAGCACCCACGTCACAGAGCAGCC...TCGCTCAGCCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGTTGCTCATGGGGTTaGCCAGCAGGTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLGCSWG*PAGSER
Trigger: TCTCTCAGAACCTGCTGGCCAACCCCATGAGCAACC...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGAGAGTGGGACTTTaGTGGTGGCAGTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: STTQERWHRPSDQCLWEAWRVGL*WWQWVP
Trigger: TGGTACCCACTGCCACCACCAAAGTCCCACTCTCCA...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACCTGGGCGATGTGGGTaGTGCTTGAGGGTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRAPGRCG*CLRVCS
Trigger: GCTACACACCCTCAAGCACCACCCACATCGCCCAGG...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGCACCCTGGGCGATGTaGGTGGTGCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVAPWAM*VVLEGV
Trigger: CACACCCTCAAGCACCACCCACATCGCCCAGGGTGC...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATGCCATAAGCGTTGGGACAGGCAGGTTCTaGGTTGGGGAATTATGCATT +
Preference number: 4 (lower is better)
Translates to: AALRRRQLRALSQDAISVGTGRF*VGELCI
Trigger: AATGCATAATTCCCCAACCCAGAACCTGCCTGTCCC...AACGCTTATGGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGAGTGGGCGTTGTGTaGAGGACAGTGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVGVGVV*RTVGDR
Trigger: CCTGTCCCCCACTGTCCTCCACACAACGCCCACTCC...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCGGTTCTGTGGTGCGTaGACCTCGAGAGTCATTGAC +
Preference number: 4 (lower is better)
Translates to: LGQRRVHPPVVAQTLQPVRFCGA*TSRVID
Trigger: GTCAATGACTCTCGAGGTCCACGCACCACAGAACCG...AACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTGACCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp ACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGTCATCGTGCGCCAGCTaGCTGAGGCAGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQERWHRPSDQCLWEALMSSCAS*LRQESS
Trigger: GCTGCTCTCCTGCCTCAGCCAGCTGGCGCACGATGA...CATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGTCATCGTGCGCCAGCTaGCTGAGGCAGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HPPVVAQTLQPVHDAHIASSCAS*LRQESS
Trigger: GCTGCTCTCCTGCCTCAGCCAGCTGGCGCACGATGA...CGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGCTGACTTGAGCTCGTaGTTCTCCCGAATGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHADLSS*FSRMSR
Trigger: GCGGCTCATTCGGGAGAATCACGAGCTCAAGTCAGC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGCTGAGCGAGATGTGGGTGGTGCTTaGGGGTGTGTAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PVSVGSFNGRAQGCGAERDVGGA*GCVAGG
Trigger: GCCACCAGCTACACACCCTCAAGCACCACCCACATC...TCGCTCAGCCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACTCTGCAGCCTGTTCATaGCGCTCACATAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QRRVHPPVVAQTLQPVHDSAACS*RSHSAV
Trigger: CACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGA...GTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGTGGGCTGAAGGAGGGTaGAGAGTCTGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRWAEGG*RVCKAG
Trigger: GCCAGCCTTGCAGACTCTGCACCCTCCTTCAGCCCA...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGGTGTGGCGCTGGGCTaGAAGCTGGTTAGCATCTCG +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAGVALG*KLVSIS
Trigger: CGAGATGCTAACCAGCTTGCAGCCCAGCGCCACACC...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGGGAACTGGCCAGTGTaGCTGTTAGGGGTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAGNWPV*LLGVPQ
Trigger: TTGCGGGACCCCTAACAGGCACACTGGCCAGTTCCC...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp GGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGAGAGACAGCCACCGTaGCCATCACAGGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: GALAQAQRPVSVGSFNGRERQPP*PSQGLS
Trigger: TGATAGCCCCTGTGATGGGCACGGTGGCTGTCTCTC...ACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGCTGGAGGGGTGCTCCTaGAAACGCCATGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRLEGCS*KRHAER
Trigger: CCTCTCAGCATGGCGTTTGCAGGAGCACCCCTCCAG...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGGAGGTCTGGAGGGGTaGTCCTGCAAACGCCATGCT +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRGGLEG*SCKRHA
Trigger: AGCATGGCGTTTGCAGGAGCACCCCTCCAGACCTCC...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGAGTAGAGACATGCCCTaGGGCAGTGGCAAGGGTGCG +
Preference number: 4 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVSRDMP*GSGKGA
Trigger: CGCACCCTTGCCACTGCCCCAGGGCATGTCTCTACT...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp TGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTGGTTGCTCATGGGGTTaGCCAGCAGGTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CHKRSPAARSAQGAPARCGCSWG*PAGSER
Trigger: TCTCTCAGAACCTGCTGGCCAACCCCATGAGCAACC...ACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTCAGCCTTGGGGCCTCTaGCAGGACCAGGTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAQPWGL*QDQVAH
Trigger: ATGAGCAACCTGGTCCTGCCAGAGGCCCCAAGGCTG...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGTGGGACTTTGGTGGTaGCAGTGGGTACCACGCAAG +
Preference number: 4 (lower is better)
Translates to: AQRPVSVGSFNGRAQGCGVGLWW*QWVPRK
Trigger: CTTGCGTGGTACCCACTGCCACCACCAAAGTCCCAC...CCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCAAGAGTGGGACTTTGGTaGTGGCAGTGGGTACCACGC +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRARVGLW*WQWVPR
Trigger: GCGTGGTACCCACTGCCACCACCAAAGTCCCACTCT...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CAGATGAACATGGGCTTGCCGTCATCGTGCGCCAGCTGGCTGAGGCAGGAGAGCAGAGTGGGACTTTGGTaGTGGCAGTGGGTACCACGC +
Preference number: 4 (lower is better)
Translates to: QMNMGLPSSCASWLRQESRVGLW*WQWVPR
Trigger: GCGTGGTACCCACTGCCACCACCAAAGTCCCACTCT...GCTCTCCTGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGGGCTCAGTGGAGAGTaGGACTTTGGTGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GALAQAQRPVSVGSFNGRGLSGE*DFGGGS
Trigger: ACTGCCACCACCAAAGTCCCACTCTCCACTGAGCCC...ACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGAGGAGAAGGCCGTCTTaGGAGCAGGTGTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVRRRPS*EQVCPW
Trigger: CCATGGGCACACCTGCTCCCAAGACGGCCTTCTCCT...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTACGAGGTGGGGAGTaGGCGTTGTGTGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAVRGGE*ALCGGQ
Trigger: CTGTCCTCCACACAACGCCCACTCCCCACCTCGTAC...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCATCGTCGACGGTTCTGTaGTGCGTGGACCTCGAGAGT +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRASSTVL*CVDLES
Trigger: ACTCTCGAGGTCCACGCACCACAGAACCGTCGACGA...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATTTGCTGGTCTTGCGGTaGGCCAGCTTCCGTTCCACC +
Preference number: 4 (lower is better)
Translates to: HPGALAQAQRPVSVGSFNLLVLR*ASFRST
Trigger: GGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAA...ATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGAGCCGTACGCGCTCTaGGAAGATGCTGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: GALAQAQRPVSVGSFNGREPYAL*EDAGQD
Trigger: ATCCTGTCCAGCATCTTCCCAGAGCGCGTACGGCTC...ACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTGCCCTTCATAATTGGTaGGTAGAGACATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRVHPPVVAQTLQPVHDAALHNW*VETCPG
Trigger: CCCAGGGCATGTCTCTACTCACCAATTATGAAGGGC...AGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGTGTGTCCGAAGTGTTaGAGGAGAAGGCCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHVCPKC*RRRPSW
Trigger: CCAAGACGGCCTTCTCCTTCAACACTTCGGACACAC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGACCTCGAGAGTCATTaGCTGAAGCCGGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRADLESH*LKPGRM
Trigger: CATCCTCCCCGGCTTCAGTCAATGACTCTCGAGGTC...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGGACCTCGAGAGTCATTaGCTGAAGCCGGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: HPPVVAQTLQPVHDAHIADLESH*LKPGRM
Trigger: CATCCTCCCCGGCTTCAGTCAATGACTCTCGAGGTC...CGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR TCA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGATGTTGGAGACAGTaGAGCCGTAGAGCCGTACGC +
Preference number: 4 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVGCWRQ*SRRAVR
Trigger: GCGTACGGCTCTACGGCTTCACTGTCTCCAACATCC...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp GCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGTCCAGCGTCACCAGATaGACATGGGCTTGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: AQRPVSVGSFNGRAQGCGSSVTR*TWACRH
Trigger: ATGACGGCAAGCCCATGTTCATCTGGTGACGCTGGA...CCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp TCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGTGGGTTGGGGAATTATaGATTCGGGAAGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SQDAISVHQLLGQRRVHPWVGEL*IREGGW
Trigger: CCATCCCCCTTCCCGAATGCATAATTCCCCAACCCA...CGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCATCGACGGTTCTGTGGTaGGTGGACCTCGAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRASTVLW*VDLESH
Trigger: ATGACTCTCGAGGTCCACGCACCACAGAACCGTCGA...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp ACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGGAACTTGCTGGTCTTaGGGTGGGCCAGCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: TQERWHRPSDQCLWEALMGTCWS*GGPASV
Trigger: AACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCC...CATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGGGAACTTGCTGGTCTTaGGGTGGGCCAGCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: HPPVVAQTLQPVHDAHIAGTCWS*GGPASV
Trigger: AACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCC...CGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATTGCTGGACAGGATCCTaGGGTCCAGCTGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: HPGALAQAQRPVSVGSFNCWTGS*GPAGRQ
Trigger: TTGCCTTCCAGCTGGACCGCAGGATCCTGTCCAGCA...ATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGGCGCTCTCGCAGGATaGCATAAGCGTTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRAGALAG*HKRSPA
Trigger: AGCTGGTGAACGCTTATGGCATCCTGCGAGAGCGCC...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGCTGTGTAGCCCGGTGTGGCGCTaGGCTGCAAGCTGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: PVVAQTLQPVHDAHIALCSPVWR*AASWLA
Trigger: TGCTAACCAGCTTGCAGCCCAGCGCCACACCGGGCT...ACACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGATAGGGGTGGAGGTCTaGAGGGGTGCTCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRIGVEV*RGAPAN
Trigger: GTTTGCAGGAGCACCCCTCCAGACCTCCACCCCTAT...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTGGGACAGGCAGGTTCTaGGTTGGGGAATTATGCATT +
Preference number: 4 (lower is better)
Translates to: APPRSAGTGPATSVCGKLGTGRF*VGELCI
Trigger: AATGCATAATTCCCCAACCCAGAACCTGCCTGTCCC...AAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp GGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCCCTTCATAATTGGTaGGTAGAGACATGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GALAQAQRPVSVGSFNGRALHNW*VETCPG
Trigger: CCCAGGGCATGTCTCTACTCACCAATTATGAAGGGC...ACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGATTCTCCCGAATaGGCCGCACCAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGALAQAQRPVSVGSFNGRDSPE*AAPTSS
Trigger: TGAAGAAGTTGGTGCGGCTCATTCGGGAGAATCACG...GCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGTCACATAGCGCTGTGTaGGCCTCTGGCACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRSHSAV*ASGTAS
Trigger: AGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGA...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp TGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGTCTGCAGCCTGTTCATaGCGCTCACATAGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: WHRPSDQCLWEALMAVHRSAACS*RSHSAV
Trigger: CACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGA...CCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CAGCCTGTTCATGACGCTCACATAGCGCTGTGTGAGCCTCTGGCACAGCTTCTCTCGTTCGTTTGCCACTaGTGGGGACGGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPVHDAHIALCEPLAQLLSFVCH*WGRGQE
Trigger: TTCCTGCCCCCGTCCCCAGCAGTGGCAAACGAACGA...GAGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGAGCGTCATGAACAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGCTGTGTGGAGGTCTGGAGGGGTaGTCCTGCAAACGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PVVAQTLQPVHDAHIALCGGLEG*SCKRHA
Trigger: AGCATGGCGTTTGCAGGAGCACCCCTCCAGACCTCC...ACACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR GCA 90 bp CAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCTGGGTTGGGGAATTATaGATTCGGGAAGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: QERWHRPSDQCLWEALMAWVGEL*IREGGW
Trigger: CCATCCCCCTTCCCGAATGCATAATTCCCCAACCCA...GGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGCTGTGTAGTAGAGACATGCCCTaGGGCAGTGGCAAGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PVVAQTLQPVHDAHIALCSRDMP*GSGKGA
Trigger: CGCACCCTTGCCACTGCCCCAGGGCATGTCTCTACT...ACACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTAAGACACCATTGTTCTaGCGTGAGGAAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRVHPPVVAQTLQPVHDAKTPLF*REERPA
Trigger: AGCAGGCCTTTCCTCACGCCAGAACAATGGTGTCTT...AGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CAGCCTGTTCATGACGCTCACATAGCGCTGTGTGAGCCTCTGGCACAGCTTCTCCTTTGGTGGTGGCAGTaGGTACCACGCAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QPVHDAHIALCEPLAQLLLWWWQ*VPRKLG
Trigger: CCCCAGCTTGCGTGGTACCCACTGCCACCACCAAAG...GAGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGAGCGTCATGAACAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGCTGTGTCCTGGGCGATGTGGGTaGTGCTTGAGGGTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PVVAQTLQPVHDAHIALCPGRCG*CLRVCS
Trigger: GCTACACACCCTCAAGCACCACCCACATCGCCCAGG...ACACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp TCGCAGGATGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGAGGCAGGTTCTGGGTTaGGGAATTATGCATTCGGGA +
Preference number: 4 (lower is better)
Translates to: SQDAISVHQLLGQRRVHPRQVLG*GIMHSG
Trigger: TCCCGAATGCATAATTCCCCAACCCAGAACCTGCCT...CGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCATCCTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTCGGTTCTGTGGTGCGTaGACCTCGAGAGTCATTGAC +
Preference number: 4 (lower is better)
Translates to: HRPSDQCLWEALMAVHRARFCGA*TSRVID
Trigger: GTCAATGACTCTCGAGGTCCACGCACCACAGAACCG...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GACGCTCACATAGCGCTGTGTGAGCCTCTGGCACAGCTTCTCATCCAGCTTGTGTCTCGGGGAACTTGCTaGTCTTGCGGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DAHIALCEPLAQLLIQLVSRGTC*SCGGPA
Trigger: AGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGA...CACAAGCTGGATGAGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGGGTTCAGGGAAGCCTaGATGATCTTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHGFREA*MIFSGM
Trigger: CATCCCAGAGAAGATCATCCAGGCTTCCCTGAACCC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGAGCGACCAGTGTCTGTaGGAAGCTTTAATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: AQRPVSVGSFNGRAQGCGSDQCL*EALMAV
Trigger: CACGGCCATTAAAGCTTCCCACAGACACTGGTCGCT...CCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR GCA 90 bp CCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGCTGAGCGAGTTCCACCTCCATCATaGTCTTCGTCGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PVSVGSFNGRAQGCGAERVPPPS*SSSTVL
Trigger: CAGAACCGTCGACGAAGAGCATGATGGAGGTGGAAC...TCGCTCAGCCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp GCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGAAGACACCATTGTTCTaGCGTGAGGAAAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AQRPVSVGSFNGRAQGCGKTPLF*REERPA
Trigger: AGCAGGCCTTTCCTCACGCCAGAACAATGGTGTCTT...CCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CAGCCTGTTCATGACGCTCACATAGCGCTGTGTGAGCCTCTGGCACAGCTTCTCGTGGGACTTTGGTGGTaGCAGTGGGTACCACGCAAG +
Preference number: 4 (lower is better)
Translates to: QPVHDAHIALCEPLAQLLVGLWW*QWVPRK
Trigger: CTTGCGTGGTACCCACTGCCACCACCAAAGTCCCAC...GAGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGAGCGTCATGAACAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp GCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGTTCTCATCCAGCTTGTaGTCACTGGGGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AQRPVSVGSFNGRAQGCGFSSSL*SLGFRE
Trigger: TTCCCTGAACCCCAGTGACCACAAGCTGGATGAGAA...CCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp ACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGCTGAGTCTTGATCGCTaGCTTGAGCTCGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: TQERWHRPSDQCLWEALMLSLDR*LELVIL
Trigger: GAGAATCACGAGCTCAAGTCAGCGATCAAGACTCAG...CATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR TCA 90 bp CAGCCTGTTCATGACGCTCACATAGCGCTGTGTGAGCCTCTGGCACAGCTTCTCTCCAGCGTCACCAGATaGACATGGGCTTGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: QPVHDAHIALCEPLAQLLSSVTR*TWACRH
Trigger: ATGACGGCAAGCCCATGTTCATCTGGTGACGCTGGA...GAGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGAGCGTCATGAACAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp CAGCCTGTTCATGACGCTCACATAGCGCTGTGTGAGCCTCTGGCACAGCTTCTCTGGAGAGTGGGACTTTaGTGGTGGCAGTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: QPVHDAHIALCEPLAQLLWRVGL*WWQWVP
Trigger: TGGTACCCACTGCCACCACCAAAGTCCCACTCTCCA...GAGAAGCTGTGCCAGAGGCTCACACAGCGCTATGTGAGCGTCATGAACAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CCA 90 bp ACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGAGGCAGGTTCTGGGTTaGGGAATTATGCATTCGGGA +
Preference number: 4 (lower is better)
Translates to: TQERWHRPSDQCLWEALMRQVLG*GIMHSG
Trigger: TCCCGAATGCATAATTCCCCAACCCAGAACCTGCCT...CATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CCA 90 bp CACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATCTGGATGATCTTCTCTaGGATGTTGGAGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: HPGALAQAQRPVSVGSFNLDDLL*DVGDSE
Trigger: TTCACTGTCTCCAACATCCCAGAGAAGATCATCCAG...ATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS CCA 90 bp GGGCCCAGTGGGGCCTCCGCGGAGTGGCTCAGCCAGCCGCAGCCTTaGGGCCTCTGGCAGGACCAGGTTGCTCATGGGGTTGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GPSGASAEWLSQPQP*GLWQDQVAHGVGQQ
Trigger: CTGCTGGCCAACCCCATGAGCAACCTGGTCCTGCCAGAGGCCCCAAGGCTGCGGCTGGCTGAGCCACTCCGCGGAGGCCCCACTGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS-3UTR CAA 90 bp GGTGTAGGGGCCGCCCTCAGACGCCGCCAGCTCCGGGCGCTCTCGCAGGATGCCCGATGTGGGTGGTGCTaGAGGGTGTGTAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GVGAALRRRQLRALSQDARCGWC*RVCSWW
Trigger: CCACCAGCTACACACCCTCAAGCACCACCCACATCG...GGCATCCTGCGAGAGCGCCCGGAGCTGGCGGCGTCTGAGGGCGGCCCCTACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS GCA 90 bp CCCAGGGCCCCAGGCCTTGCCTGGGCTGAAGGAGGGTGCAGAGTCTaGAAGGCTGGCCCAGTGGGCCCTGGGTATTGTGAGGTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PRAPGLAWAEGGCRV*KAGPVGPGYCEVRG
Trigger: GCCTCTGACCTCACAATACCCAGGGCCCACTGGGCCAGCCTTGCAGACTCTGCACCCTCCTTCAGCCCAGGCAAGGCCTGGGGCCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS CCA 90 bp AGTGGAGAGTGGGACTTTGGTGGTGGCAGTGGGTACCACGCAAGCTaGGGACTGGGGCCCAGTGGGGCCTCCGCGGAGTGGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGEWDFGGGSGYHAS*GLGPSGASAEWLSQ
Trigger: CTGGCTGAGCCACTCCGCGGAGGCCCCACTGGGCCCCAGTCCCCAGCTTGCGTGGTACCCACTGCCACCACCAAAGTCCCACTCTCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS-3UTR CAA 90 bp CGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGGGAACTTGCTGGTCTaGCGGTGGGCCAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: RVGEHAGVHGLHHHTLQEGNLLV*RWASFR
Trigger: ACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCC...TTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp CGCGTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAAGGAAAGGCCTGCTGTaGCCTCACCAAGCCCACTCG +
Preference number: 5 (lower is better)
Translates to: RVGEHAGVHGLHHHTLQERKGLL*PHQAHS
Trigger: CGAGTGGGCTTGGTGAGGCAACAGCAGGCCTTTCCT...TTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS TCA 90 bp TCCCGCAATGGGACTGGTCAGGAAGCTGGTGAGGGGGCTGCTCTGTaGCGTGGGTGCTGGGCCAGACAGCAGCGTGCTGAGGGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: SRNGTGQEAGEGAAL*RGCWARQQRAEGAC
Trigger: ACAGGCACCCTCAGCACGCTGCTGTCTGGCCCAGCACCCACGTCACAGAGCAGCCCCCTCACCAGCTTCCTGACCAGTCCCATTGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS GCA 90 bp GTGCCTGTCAGGGGGCTCATGAGTGAGCCCGGTGTGGCGCTGGGCTaGAAGCTGGTTAGCATCTCGGCCAGGGGTGCCAAGGCCATGATC +
Preference number: 5 (lower is better)
Translates to: VPVRGLMSEPGVALG*KLVSISARGAKAMI
Trigger: GATCATGGCCTTGGCACCCCTGGCCGAGATGCTAACCAGCTTGCAGCCCAGCGCCACACCGGGCTCACTCATGAGCCCCCTGACAGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS GCA 90 bp TGTGCCCATGGCTCCGATAGGGGTGGAGGTCTGGAGGGGTGCTCCTaGAAACGCCATGCTGAGAGGCTCTGGGTCCTGGGTCGACTGGGG +
Preference number: 5 (lower is better)
Translates to: CAHGSDRGGGLEGCS*KRHAERLWVLGRLG
Trigger: CCCCAGTCGACCCAGGACCCAGAGCCTCTCAGCATGGCGTTTGCAGGAGCACCCCTCCAGACCTCCACCCCTATCGGAGCCATGGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS-3UTR CAA 90 bp TGCCATAAGCGTTCACCAGCTGCTCGGTCAGCGCAGGGTGCACCCGCCCGTTGTGGGTTCTCGGGGAACTaGCTGGTCTTGCGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: CHKRSPAARSAQGAPARCGFSGN*LVLRWA
Trigger: GGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCC...ACAACGGGCGGGTGCACCCTGCGCTGACCGAGCAGCTGGTGAACGCTTATGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp GTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTCCAGATGAACATGGGCTaGCCGTCATCGTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: VGEHAGVHGLHHHTLQEVQMNMG*PSSCAS
Trigger: GCTGGCGCACGATGACGGCAAGCCCATGTTCATCTG...GACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp CAGCGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACAGATGCAGGGACCACTaGTTCCTGGGCGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: QRRVHPPVVAQTLQPVHDRCRDH*FLGGTG
Trigger: CCCAGTGCCGCCCAGGAACAAGTGGTCCCTGCATCT...GTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp AGCACCACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTCGATGTGGGTGGTGCTaGAGGGTGTGTAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: STTQERWHRPSDQCLWEARCGWC*RVCSWW
Trigger: CCACCAGCTACACACCCTCAAGCACCACCCACATCG...AGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACGGGTTCTCGGGGAACTaGCTGGTCTTGCGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHGFSGN*LVLRWA
Trigger: GGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCC...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp CACCCAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATCGAGGACTCGTTCGTTaGCCACTGCTGGGGACGGGG +
Preference number: 5 (lower is better)
Translates to: HPGALAQAQRPVSVGSFNRGLVR*PLLGTG
Trigger: CCCCGTCCCCAGCAGTGGCAAACGAACGAGTCCTCG...ATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp CGCAGGGTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTAAGGAGAAGGCCGTCTaGGGAGCAGGTGTGCCCATG +
Preference number: 5 (lower is better)
Translates to: RRVHPPVVAQTLQPVHDAKEKAV*GAGVPM
Trigger: CATGGGCACACCTGCTCCCAAGACGGCCTTCTCCTT...AGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCACCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp GGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTAGATGCAGGGACCACTaGTTCCTGGGCGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: GALAQAQRPVSVGSFNGRRCRDH*FLGGTG
Trigger: CCCAGTGCCGCCCAGGAACAAGTGGTCCCTGCATCT...ACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS CCA 90 bp GTGGGGACAGATGCAGGGACCACTTGTTCCTGGGCGGCACTGGGCTaGGCCTGTGTGTCCGAAGTGTTGAAGGAGAAGGCCGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: VGTDAGTTCSWAALG*ACVSEVLKEKAVLG
Trigger: TCCCAAGACGGCCTTCTCCTTCAACACTTCGGACACACAGGCCCAGCCCAGTGCCGCCCAGGAACAAGTGGTCCCTGCATCTGTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS CCA 90 bp TCAGGGAAGCCTCGGGGGTTCTCGGGGAACTTGCTGGTCTTGCGGTaGGCCAGCTTCCGTTCCACCTCCATCATGCTCTTCGTCGACGGT +
Preference number: 5 (lower is better)
Translates to: SGKPRGFSGNLLVLR*ASFRSTSIMLFVDG
Trigger: ACCGTCGACGAAGAGCATGATGGAGGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCCCCGAGGCTTCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp CAGATGAACATGGGCTTGCCGTCATCGTGCGCCAGCTGGCTGAGGCAGGAGAGCGTGGAGAGTGGGACTTaGGTGGTGGCAGTGGGTACC +
Preference number: 5 (lower is better)
Translates to: QMNMGLPSSCASWLRQESVESGT*VVAVGT
Trigger: GGTACCCACTGCCACCACCAAAGTCCCACTCTCCAC...GCTCTCCTGCCTCAGCCAGCTGGCGCACGATGACGGCAAGCCCATGTTCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAAGGAGAAGGCCGTCTaGGGAGCAGGTGTGCCCATG +
Preference number: 5 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHKEKAV*GAGVPM
Trigger: CATGGGCACACCTGCTCCCAAGACGGCCTTCTCCTT...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp GTCGGCGAGCATGCCGGGGTGCACGGTCTCCACCACCACACGCTGCAGGAAGTCTGTGTGTCCGAAGTGTaGAAGGAGAAGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: VGEHAGVHGLHHHTLQEVCVSEV*KEKAVL
Trigger: CAAGACGGCCTTCTCCTTCAACACTTCGGACACACA...GACTTCCTGCAGCGTGTGGTGGTGGAGACCGTGCACCCCGGCATGCTCGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGAACTTGCTGGTCTaGCGGTGGGCCAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVGNLLV*RWASFR
Trigger: ACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCC...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS TCA 90 bp TGCTCTTCGTCGACGGTTCTGTGGTGCGTGGACCTCGAGAGTCATTaGCTGAAGCCGGGGAGGATGAGGTACGAGGTGGGGAGTGGGCGT +
Preference number: 5 (lower is better)
Translates to: CSSSTVLWCVDLESH*LKPGRMRYEVGSGR
Trigger: ACGCCCACTCCCCACCTCGTACCTCATCCTCCCCGGCTTCAGTCAATGACTCTCGAGGTCCACGCACCACAGAACCGTCGACGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS-3UTR CAA 90 bp CACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTAGGAAAGGCCTGCTGTaGCCTCACCAAGCCCACTCG +
Preference number: 5 (lower is better)
Translates to: HRPSDQCLWEALMAVHRARKGLL*PHQAHS
Trigger: CGAGTGGGCTTGGTGAGGCAACAGCAGGCCTTTCCT...AGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp CCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGGGGCTGAGCGAGTGGAGAGTGGGACTTaGGTGGTGGCAGTGGGTACC +
Preference number: 5 (lower is better)
Translates to: PVSVGSFNGRAQGCGAERVESGT*VVAVGT
Trigger: GGTACCCACTGCCACCACCAAAGTCCCACTCTCCAC...TCGCTCAGCCCCACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp AGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGGGCTGTGCAGATGAACATGGGCTaGCCGTCATCGTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RPSDQCLWEALMAVHRAVQMNMG*PSSCAS
Trigger: GCTGGCGCACGATGACGGCAAGCCCATGTTCATCTG...CACAGCCCTGTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp CAGGAGCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGGCAGGAAGACACCATaGTTCTGGCGTGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QERWHRPSDQCLWEALMAGRKTP*FWREER
Trigger: CCTTTCCTCACGCCAGAACAATGGTGTCTTCCTGCC...GGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp CGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCACAGCTTCTCATCCAGCTaGTGGTCACTGGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RWHRPSDQCLWEALMAVHSFSSS*WSLGFR
Trigger: CCTGAACCCCAGTGACCACAAGCTGGATGAGAAGCT...GTGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS TCA 90 bp CGTGAACCCGCTGATGCCGAGCCCGCCTGCCTGAGTCTTGATCGCTaGCTTGAGCTCGTGATTCTCCCGAATGAGCCGCACCAACTTCTT +
Preference number: 5 (lower is better)
Translates to: REPADAEPACLSLDR*LELVILPNEPHQLL
Trigger: AAGAAGTTGGTGCGGCTCATTCGGGAGAATCACGAGCTCAAGTCAGCGATCAAGACTCAGGCAGGCGGGCTCGGCATCAGCGGGTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS GCA 90 bp ACTTGCTGGTCTTGCGGTGGGCCAGCTTCCGTTCCACCTCCATCATaGTCTTCGTCGACGGTTCTGTGGTGCGTGGACCTCGAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: TCWSCGGPASVPPPS*SSSTVLWCVDLESH
Trigger: ATGACTCTCGAGGTCCACGCACCACAGAACCGTCGACGAAGAGCATGATGGAGGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS-3UTR CAA 90 bp GCGCTGGCACAGGCCCAGCGACCAGTGTCTGTGGGAAGCTTTAATGGCCGTGCATGTGTGTCCGAAGTGTaGAAGGAGAAGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: ALAQAQRPVSVGSFNGRACVSEV*KEKAVL
Trigger: CAAGACGGCCTTCTCCTTCAACACTTCGGACACACA...TGCACGGCCATTAAAGCTTCCCACAGACACTGGTCGCTGGGCCTGTGCCAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS-3UTR CAA 90 bp GTGCACCCGCCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAAGCTTCTCATCCAGCTaGTGGTCACTGGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VHPPVVAQTLQPVHDAHISFSSS*WSLGFR
Trigger: CCTGAACCCCAGTGACCACAAGCTGGATGAGAAGCT...TATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGGCGGGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS-3UTR CAA 90 bp CCCGTTGTAGCCCAGACTCTGCAGCCTGTTCATGACGCTCACATAGCGCTGTGTGGCAGGAAGACACCATaGTTCTGGCGTGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: PVVAQTLQPVHDAHIALCGRKTP*FWREER
Trigger: CCTTTCCTCACGCCAGAACAATGGTGTCTTCCTGCC...ACACAGCGCTATGTGAGCGTCATGAACAGGCTGCAGAGTCTGGGCTACAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS CCA 72 bp CAGTGGGTACCACGCAAGCTGGGGACTGGGGCCCAGTaGGGCCTCCGCGGAGTGGCTCAGCCAGCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: QWVPRKLGTGAQ*GLRGVAQPAAA
Trigger: GGCTGCGGCTGGCTGAGCCACTCCGCGGAGGCCCCACTGGGCCCCAGTCCCCAGCTTGCGTGGTACCCACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS GCA 72 bp TGCTCTGGGACATGGCCACAGGGCCTGCCACGAGGCTaGTGGGAGTCAGGGTGCCAGTGGAGGGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: CSGTWPQGLPRG*WESGCQWRAGP
Trigger: TGGGCCTGCCCTCCACTGGCACCCTGACTCCCAGCAGCCTCGTGGCAGGCCCTGTGGCCATGTCCCAGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS CCA 72 bp GCGGAGTGGCTCAGCCAGCCGCAGCCTTGGGGCCTCTaGCAGGACCAGGTTGCTCATGGGGTTGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: AEWLSQPQPWGL*QDQVAHGVGQQ
Trigger: CTGCTGGCCAACCCCATGAGCAACCTGGTCCTGCCAGAGGCCCCAAGGCTGCGGCTGGCTGAGCCACTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS GCA 72 bp AGGGGGCTCATGAGTGAGCCCGGTGTGGCGCTGGGCTaGAAGCTGGTTAGCATCTCGGCCAGGGGTGCCAAG +
Preference number: 6 (lower is better)
Translates to: RGLMSEPGVALG*KLVSISARGAK
Trigger: CTTGGCACCCCTGGCCGAGATGCTAACCAGCTTGCAGCCCAGCGCCACACCGGGCTCACTCATGAGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS GCA 72 bp GGCTCCGATAGGGGTGGAGGTCTGGAGGGGTGCTCCTaGAAACGCCATGCTGAGAGGCTCTGGGTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GSDRGGGLEGCS*KRHAERLWVLG
Trigger: ACCCAGGACCCAGAGCCTCTCAGCATGGCGTTTGCAGGAGCACCCCTCCAGACCTCCACCCCTATCGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS GCA 72 bp GCCCATGGCTCCGATAGGGGTGGAGGTCTGGAGGGGTaGTCCTGCAAACGCCATGCTGAGAGGCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: AHGSDRGGGLEG*SCKRHAERLWV
Trigger: GACCCAGAGCCTCTCAGCATGGCGTTTGCAGGAGCACCCCTCCAGACCTCCACCCCTATCGGAGCCATGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS CAA 72 bp GCCAGCTGCTTCGACTCTCGGGGGTTCTCGGGGAACTaGCTGGTCTTGCGGTGGGCCAGCTTCCGTTCCACC +
Preference number: 6 (lower is better)
Translates to: ASCFDSRGFSGN*LVLRWASFRST
Trigger: GGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCCCCGAGAGTCGAAGCAGCTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS GCA 72 bp CCAGCTGCTTCGACTCTCGGGGGTTCTCGGGGAACTTaGTGGTCTTGCGGTGGGCCAGCTTCCGTTCCACCT +
Preference number: 6 (lower is better)
Translates to: PAASTLGGSRGT*WSCGGPASVPP
Trigger: AGGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCCCCGAGAGTCGAAGCAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS CCA 72 bp GTTCAGGGAAGCCTCGGGGGTTCTCGGGGAACTTGCTaGTCTTGCGGTGGGCCAGCTTCCGTTCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: VQGSLGGSRGTC*SCGGPASVPPP
Trigger: TGGAGGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCCCCGAGGCTTCCCTGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS CAA 72 bp GGGAAGCCTCGGGGGTTCTCGGGGAACTTGCTGGTCTaGCGGTGGGCCAGCTTCCGTTCCACCTCCATCATG +
Preference number: 6 (lower is better)
Translates to: GKPRGFSGNLLV*RWASFRSTSIM
Trigger: CATGATGGAGGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCCCCGAGGCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS CCA 72 bp GATGCAGGGACCACTTGTTCCTGGGCGGCACTGGGCTaGGCCTGTGTGTCCGAAGTGTTGAAGGAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: DAGTTCSWAALG*ACVSEVLKEKA
Trigger: GGCCTTCTCCTTCAACACTTCGGACACACAGGCCCAGCCCAGTGCCGCCCAGGAACAAGTGGTCCCTGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS CCA 72 bp CCTCGGGGGTTCTCGGGGAACTTGCTGGTCTTGCGGTaGGCCAGCTTCCGTTCCACCTCCATCATGCTCTTC +
Preference number: 6 (lower is better)
Translates to: PRGFSGNLLVLR*ASFRSTSIMLF
Trigger: GAAGAGCATGATGGAGGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCCCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS CCA 72 bp GCCTCTGGCACAGCTTCTCATCCAGCTTGTGGTCACTaGGGTTCAGGGAAGCCTCGGGGGTTCTCGGGGAAC +
Preference number: 6 (lower is better)
Translates to: ASGTASHPACGH*GSGKPRGFSGN
Trigger: GTTCCCCGAGAACCCCCGAGGCTTCCCTGAACCCCAGTGACCACAAGCTGGATGAGAAGCTGTGCCAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447830.2
CDS CAA 90 bp ATGCTCTTCGTCGACGGTTCTGTGGTGCGTGGACCTCGAGAGTCATaGACTGAAGCCGGGGAGGATGAGGTACGAGGTGGGGAGTGGGCG +
Preference number: 6 (lower is better)
Translates to: MLFVDGSVVRGPRES*TEAGEDEVRGGEWA
Trigger: CGCCCACTCCCCACCTCGTACCTCATCCTCCCCGGCTTCAGTCAATGACTCTCGAGGTCCACGCACCACAGAACCGTCGACGAAGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS TCA 72 bp GCTGATGCCGAGCCCGCCTGCCTGAGTCTTGATCGCTaGCTTGAGCTCGTGATTCTCCCGAATGAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: ADAEPACLSLDR*LELVILPNEPH
Trigger: GTGCGGCTCATTCGGGAGAATCACGAGCTCAAGTCAGCGATCAAGACTCAGGCAGGCGGGCTCGGCATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS TCA 72 bp TGGGGACGGGGGCAGGAAGACACCATTGTTCTGGCGTaGGGAAAGGCCTGCTGTTGCCTCACCAAGCCCACT +
Preference number: 6 (lower is better)
Translates to: WGRGQEDTIVLA*GKACCCLTKPT
Trigger: AGTGGGCTTGGTGAGGCAACAGCAGGCCTTTCCTCACGCCAGAACAATGGTGTCTTCCTGCCCCCGTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS TCA 72 bp TCGACGGTTCTGTGGTGCGTGGACCTCGAGAGTCATTaGCTGAAGCCGGGGAGGATGAGGTACGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: STVLWCVDLESH*LKPGRMRYEVG
Trigger: CCCCACCTCGTACCTCATCCTCCCCGGCTTCAGTCAATGACTCTCGAGGTCCACGCACCACAGAACCGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS CCA 72 bp CCCCACTTCTTCGAGGACTCGTTCGTTTGCCACTGCTaGGGACGGGGGCAGGAAGACACCATTGTTCTGGCG +
Preference number: 6 (lower is better)
Translates to: PHFFEDSFVCHC*GRGQEDTIVLA
Trigger: CGCCAGAACAATGGTGTCTTCCTGCCCCCGTCCCCAGCAGTGGCAAACGAACGAGTCCTCGAAGAAGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377470.8
ENST00000447830.2
CDS CCA 72 bp TCTCGGGGGTTCTCGGGGAACTTGCTGGTCTTGCGGTaGGCCAGCTTCCGTTCCACCTCCATCATGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SRGFSGNLLVLR*ASFRSTSIMLF
Trigger: GAAGAGCATGATGGAGGTGGAACGGAAGCTGGCCCACCGCAAGACCAGCAAGTTCCCCGAGAACCCCCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377470.8
CDS CCA 72 bp TGTGTGAGCCTCTGGCACAGCTTCTCATCCAGCTTGTaGTCACTGGGGTTCAGGGAAGCCTGGATGATCTTC +
Preference number: 6 (lower is better)
Translates to: CVSLWHSFSSSL*SLGFREAWMIF
Trigger: GAAGATCATCCAGGCTTCCCTGAACCCCAGTGACCACAAGCTGGATGAGAAGCTGTGCCAGAGGCTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377470.8