Pregenerated sensors for SPATA9 (Homo sapiens)
Ensembl gene IDs: ENSG00000145757Ensembl transcript IDs: ENST00000274432.13, ENST00000316087.12, ENST00000477047.6, ENST00000477715.5, ENST00000489917.1
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCTTAGAGTAAAATCCATACACAGCACTGCACAACCTGGCTCCTaGCTGTTTACCAATCTTGCATATTATGTTCCAGTCTTCTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: ALRVKSIHSTAQPGS*LFTNLAYYVPVFWN Trigger: GTTCCAGAAGACTGGAACATAATATGCAAGATTGGTAAACAGGCAGGAGCCAGGTTGTGCAGTGCTGTGTATGGATTTTACTCTAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR CCA 90 bp | CTGCAAAAATACCATTCATTTCTTGGCCTTTCTCCTCACAGTCTTTaGCACTACAGTTCACCTAGCTGCACAAACCTAAAACTTGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: LQKYHSFLGLSPHSL*HYSSPSCTNLKLGS Trigger: ACTCCCAAGTTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAGGCCAAGAAATGAATGGTATTTTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR TCA 90 bp | GATCTTGCCTCTCTACAACCTCTCTTCCACCTGACCTCTAAATGTTaGAGTGTTTCAGGAATTGTCTTAGACCTTCTTCCTTATCTACAC | + |
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Preference number: 1 (lower is better) Translates to: DLASLQPLFHLTSKC*SVSGIVLDLLPYLH Trigger: GTGTAGATAAGGAAGAAGGTCTAAGACAATTCCTGAAACACTTCAACATTTAGAGGTCAGGTGGAAGAGAGGTTGTAGAGAGGCAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR GCA 90 bp | CTTGGCCTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTaGACAAACCTAAAACTTGGGAGTCATCTTTATTTATTTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: LGLSPHSLWHYSSPS*TNLKLGSHLYLFFC Trigger: ACAGAAAAATAAATAAAGATGACTCCCAAGTTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAGGCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR CCA 90 bp | GGCTCCTGCCTGTTTACCAATCTTGCATATTATGTTCCAGTCTTCTaGAACACATTCACCAAGACTTTTCTTTCCTTCAGGCTTTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: GSCLFTNLAYYVPVF*NTFTKTFLSFRLLY Trigger: ATACAAAAGCCTGAAGGAAAGAAAAGTCTTGGTGAATGTGTTCCAGAAGACTGGAACATAATATGCAAGATTGGTAAACAGGCAGGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR CCA 90 bp | CAATTTTCACTCTCCTCTCTGTTTTGCCTTATGGATTCTTCTTCCTaGAAGATGTTCTTTACCTTCTTCAGCACAGCATTAACACAGACT | + |
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Preference number: 1 (lower is better) Translates to: QFSLSSLFCLMDSSS*KMFFTFFSTALTQT Trigger: AGTCTGTGTTAATGCTGTGCTGAAGAAGGTAAAGAACATCTTCCAGGAAGAAGAATCCATAAGGCAAAACAGAGAGGAGAGTGAAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489917.1 |
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| 3UTR TCA 90 bp | GCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTaGGCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: AFQLSCHLSDQFLYV*ADNSSIEFSPVSVH Trigger: ATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAAATCCATACACAGCACTaGACAACCTGGCTCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSPHSLWHYSSPSCTNLKIHTQH*TTWLLP Trigger: AGGCAGGAGCCAGGTTGTGCAGTGCTGTGTATGGAT...TTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAAGGACCCCTAGCTTTCTaGTTTCTGGGCATCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: LSPHSLWHYSSPSCTNLKGPLAF*FLGIHC Trigger: ACAATGGATGCCCAGAAATCAGAAAGCTAGGGGTCC...TTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGCTGTTAAGTGATCTGTaGTCAAGGCAGATCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GHFSSAVISVTSFYMCELLLSDL*SRQILK Trigger: CTTCAAGATCTGCCTTGATCACAGATCACTTAACAG...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGTTAACCACTGTTAAGTaGTCTGTGATCAAGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: GHFSSAVISVTSFYMCELLTTVK*SVIKAD Trigger: ATCTGCCTTGATCACAGATCACTTAACAGTGGTTAA...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAACAGCTGTCATCTCAGTaGCCAGTTTTTATATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LSPHSLWHYSSPSCTNLKQLSSQ*PVFICV Trigger: CACACATATAAAAACTGGTCACTGAGATGACAGCTG...TTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR CAA 90 bp | ATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGAAGACCTaGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTTGGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: IEFSPVSVHNESLKT*LLKLLSIDQQLWCH Trigger: GTGACACCAAAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR TCA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTAACCACTGTTAAGTaGTCTGTGATCAAGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQLTTVK*SVIKAD Trigger: ATCTGCCTTGATCACAGATCACTTAACAGTGGTTAA...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAAAAATACCATTCATTTCTTGGCCTTTCTCCTCACAGTCTTTGGCACTACTGTTAAGTGATCTGTaGTCAAGGCAGATCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SAKIPFISWPFSSQSLALLLSDL*SRQILK Trigger: CTTCAAGATCTGCCTTGATCACAGATCACTTAACAG...TAGTGCCAAAGACTGTGAGGAGAAAGGCCAAGAAATGAATGGTATTTTTGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR CAA 90 bp | AATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTaGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTT | + |
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Preference number: 2 (lower is better) Translates to: NSSIEFSPVSVHNES*KTLLLKLLSIDQQL Trigger: AAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTGCTATAATCCATTCTCCACAGAGCCGGGAGCATTCTTTCAAAAAGAAACAATTCACACTTTCCTaGTTTATACTCTTCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: CFAIIHSPQSREHSFKKKQFTLS*FILFSG Trigger: GCCACTGAAGAGTATAAAGCAGGAAAGTGTGAATTG...TTTCTTTTTGAAAGAATGCTCCCGGCTCTGTGGAGAATGGATTATAGCAAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTCTTGATTTTCCATTCTGCAAAAATACCATTCATTTCTTGGCCTTTCTCGCTCTTCTTTCAGTATaGAATTCTCTTCCCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: IALDFPFCKNTIHFLAFLALLSV*NSLPQA Trigger: AGCTTGGGGAAGAGAATTCCATACTGAAAGAAGAGC...GAGAAAGGCCAAGAAATGAATGGTATTTTTGCAGAATGGAAAATCAAGAGCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR-3UTR CCA 90 bp | GCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGATGGCTCTGGGTTGTTTATaGGAGCTAATACATCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: AYEAYIMLVKAVFAGKEMALGCL*ELIHLL Trigger: AAGAAGATGTATTAGCTCCCATAAACAACCCAGAGC...CATCTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
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| 3UTR CCA 72 bp | CCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTaGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAG | + |
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Preference number: 3 (lower is better) Translates to: PQAVGMSSSFAF*AFQLSCHLSDQ Trigger: CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTACGACCGTGTATAGTTaGCCCCTGCTGAACTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PKLLACLVHLHFGHFSSATTVYS*PLLNLK Trigger: TTTCAAGTTCAGCAGGGGCAAACTATACACGGTCGT...AGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR CAA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGGTCCATAATGAGAGCTaGAAGACCTTGCTCCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQVHNES*KTLLLK Trigger: TTTGAGGAGCAAGGTCTTCAAGCTCTCATTATGGAC...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR GCA 72 bp | GTAAAATCCATACACAGCACTGCACAACCTGGCTCCTaGCTGTTTACCAATCTTGCATATTATGTTCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: VKSIHSTAQPGS*LFTNLAYYVPV Trigger: GACTGGAACATAATATGCAAGATTGGTAAACAGGCAGGAGCCAGGTTGTGCAGTGCTGTGTATGGATTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR CCA 72 bp | TACCATTCATTTCTTGGCCTTTCTCCTCACAGTCTTTaGCACTACAGTTCACCTAGCTGCACAAACCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: YHSFLGLSPHSL*HYSSPSCTNLK Trigger: TTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAGGCCAAGAAATGAATGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR-3UTR CAA 90 bp | CTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAATCTGGGCATCCATTGTaGTTTTGCTATAATCCATTC | + |
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Preference number: 3 (lower is better) Translates to: LSPHSLWHYSSPSCTNLKSGHPL*FCYNPF Trigger: GAATGGATTATAGCAAAACAACAATGGATGCCCAGA...TTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR TCA 72 bp | TCTCTACAACCTCTCTTCCACCTGACCTCTAAATGTTaGAGTGTTTCAGGAATTGTCTTAGACCTTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLQPLFHLTSKC*SVSGIVLDLLP Trigger: AGGAAGAAGGTCTAAGACAATTCCTGAAACACTTCAACATTTAGAGGTCAGGTGGAAGAGAGGTTGTAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR GCA 72 bp | TCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTaGACAAACCTAAAACTTGGGAGTCATCTTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: SPHSLWHYSSPS*TNLKLGSHLYL Trigger: TAAATAAAGATGACTCCCAAGTTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR CCA 72 bp | TTCCTTCAGGCTTTTGTATTTGCTCTTCTTTCAGTATaGAATTCTCTTCCCCAAGCTGTTGGCATGTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: FLQAFVFALLSV*NSLPQAVGMSS Trigger: ACTAGACATGCCAACAGCTTGGGGAAGAGAATTCCATACTGAAAGAAGAGCAAATACAAAAGCCTGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGACGACCGTGTATAGTTaGCCCCTGCTGAACTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: ADNSSIEFSPVSVHNESLTTVYS*PLLNLK Trigger: TTTCAAGTTCAGCAGGGGCAAACTATACACGGTCGT...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| 3UTR-3UTR CAA 90 bp | ACCCCTAGCTTTCTGATTTCTGGGCATCCATTGTTGTTTTGCTATAATCCATTCGCATGTCTAGTTCATTaGCATTTTGGGCATTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: TPSFLISGHPLLFCYNPFACLVH*HFGHFS Trigger: GCTGAAATGCCCAAAATGCAAATGAACTAGACATGC...GAATGGATTATAGCAAAACAACAATGGATGCCCAGAAATCAGAAAGCTAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR-3UTR CAA 90 bp | CTCGACTTTAGTCTCATATATCTGGTTGTTGACTTGACATCTCTACTTGGATGTAATACCATTCATTTCTaGGCCTTTCTCCTCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: LDFSLIYLVVDLTSLLGCNTIHF*AFLLTV Trigger: GACTGTGAGGAGAAAGGCCAAGAAATGAATGGTATT...ACATCCAAGTAGAGATGTCAAGTCAACAACCAGATATATGAGACTAAAGTCGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR-3UTR CAA 90 bp | AGTGCTGCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGCTCAACAGCTCTGGGTaGTTTATGGGAGCTAATACA | + |
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Preference number: 3 (lower is better) Translates to: SAAYEAYIMLVKAVFAGKLNSSG*FMGANT Trigger: TGTATTAGCTCCCATAAACAACCCAGAGCTGTTGAG...CTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGCAGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
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| 3UTR-3UTR CAA 90 bp | CTCGACTTTAGTCTCATATATCTGGTTGTTGACTTGACATCTCTACTTGGATGTTTCAGGCTTTTGTATTaGCTCTTCTTTCAGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: LDFSLIYLVVDLTSLLGCFRLLY*LFFQYG Trigger: TCCATACTGAAAGAAGAGCAAATACAAAAGCCTGAA...ACATCCAAGTAGAGATGTCAAGTCAACAACCAGATATATGAGACTAAAGTCGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| CDS-3UTR TCA 90 bp | GTCCATAGACCAGCAACTTTGGTGTCACATGGGAGCTTCTTAGACATGCAGAATAGTCTGCATGCAAGCTaGGGATGCAGAAGTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VHRPATLVSHGSFLDMQNSLHAS*GCRSLA Trigger: GGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACT...ATTCTGCATGTCTAAGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316087.12 |
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| CDS-3UTR GCA 90 bp | CTTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCATCCATACACAGCACTaGACAACCTGGCTCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPQAVGMSSSFAFWAFQLIHTQH*TTWLLP Trigger: AGGCAGGAGCCAGGTTGTGCAGTGCTGTGTATGGAT...GAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR CCA 90 bp | GTCCATAGACCAGCAACTTTGGTGTCACATGGGAGCTTCTTAGACATGCAGAATCAGCACTGCACAACCTaGCTCCTGCCTGTTTACCAA | + |
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Preference number: 4 (lower is better) Translates to: VHRPATLVSHGSFLDMQNQHCTT*LLPVYQ Trigger: TTGGTAAACAGGCAGGAGCCAGGTTGTGCAGTGCTG...ATTCTGCATGTCTAAGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR TCA 90 bp | GTCCATAGACCAGCAACTTTGGTGTCACATGGGAGCTTCTTAGACATGCAGAATAAGCTTGGGGTAATCTaGAATGTCTGGCTTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VHRPATLVSHGSFLDMQNKLGVI*NVWLLR Trigger: CCGGAGAAGCCAGACATTTCAGATTACCCCAAGCTT...ATTCTGCATGTCTAAGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR GCA 90 bp | GCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATATCCATACACAGCACTaGACAACCTGGCTCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AVGMSSSFAFWAFQLSCHIHTQH*TTWLLP Trigger: AGGCAGGAGCCAGGTTGTGCAGTGCTGTGTATGGAT...ATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR CCA 90 bp | GGTTTTGCTTTGATTTCACCTTCAGCAAACATAGGCTCCGAAAGCACAGGCTCAACAAGCTTGCAGGCCTaGGTAATGCTTGTCCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: GFALISPSANIGSESTGSTSLQA*VMLVLV Trigger: GACTAGGACAAGCATTACCCAGGCCTGCAAGCTTGT...TGAGCCTGTGCTTTCGGAGCCTATGTTTGCTGAAGGTGAAATCAAAGCAAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGCAGCACTGCACAACCTaGCTCCTGCCTGTTTACCAA | + |
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Preference number: 4 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQQHCTT*LLPVYQ Trigger: TTGGTAAACAGGCAGGAGCCAGGTTGTGCAGTGCTG...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR TCA 90 bp | GTCCATAGACCAGCAACTTTGGTGTCACATGGGAGCTTCTTAGACATGCAGAATCATCTACAAGGTCCATaGTTGCTTTCTGGATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: VHRPATLVSHGSFLDMQNHLQGP*LLSGSP Trigger: AGGGGATCCAGAAAGCAATCATGGACCTTGTAGATG...ATTCTGCATGTCTAAGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR TCA 90 bp | AGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAACTTGGGAGTCATAAGCTTGGGGTAATCTaGAATGTCTGGCTTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SLWHYSSPSCTNLKLGSHKLGVI*NVWLLR Trigger: CCGGAGAAGCCAGACATTTCAGATTACCCCAAGCTT...ATGACTCCCAAGTTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| CDS-3UTR CCA 90 bp | AGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAACTTGGGAGTCATACAAGCTTGCAGGCCTaGGTAATGCTTGTCCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLWHYSSPSCTNLKLGSHTSLQA*VMLVLV Trigger: GACTAGGACAAGCATTACCCAGGCCTGCAAGCTTGT...ATGACTCCCAAGTTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| 3UTR CAA 72 bp | TGGACCCCTAGCTTTCTGATTTCTGGGCATCCATTGTaGTTTTGCTATAATCCATTCTCCACAGAGCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: WTPSFLISGHPL*FCYNPFSTEPG Trigger: TCCCGGCTCTGTGGAGAATGGATTATAGCAAAACAACAATGGATGCCCAGAAATCAGAAAGCTAGGGGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| CDS-3UTR TCA 90 bp | AATGAGAGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTCATCTACAAGGTCCATaGTTGCTTTCTGGATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: NESLKTLLLKLLSIDQQLHLQGP*LLSGSP Trigger: AGGGGATCCAGAAAGCAATCATGGACCTTGTAGATG...AAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR TCA 90 bp | GCTTTGATTTCACCTTCAGCAAACATAGGCTCCGAAAGCACAGGCTCAGAAAAGCAGAAGTTTGGCCACTaGTTTGGAGGATCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ALISPSANIGSESTGSEKQKFGH*FGGSGY Trigger: ATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTG...CTTTTCTGAGCCTGTGCTTTCGGAGCCTATGTTTGCTGAAGGTGAAATCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR TCA 90 bp | CTTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCTGGCTTCTCCGGCAATaGCCTATAAGGTTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPQAVGMSSSFAFWAFQLWLLRQ*PIRFCF Trigger: AAAGCAAAACCTTATAGGTCATTGCCGGAGAAGCCA...GAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGAGTCCATAGAATTCTATGACCTGGAAACTCCCCAGTTTTTCTCTCTAGGACCCCTAGCTTTCTaGTTTCTGGGCATCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSESIEFYDLETPQFFSLGPLAF*FLGIHC Trigger: ACAATGGATGCCCAGAAATCAGAAAGCTAGGGGTCC...TAGAGAGAAAAACTGGGGAGTTTCCAGGTCATAGAATTCTATGGACTCACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTGATTTCACCTTCAGCAAACATAGGCTCCGAAAGCACAGGCTCAGAAACAAAGAACCCTTTCTaGCCTGTATCCAGCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FALISPSANIGSESTGSETKNPF*PVSSHV Trigger: GACATGGCTGGATACAGGTCAGAAAGGGTTCTTTGT...TTCTGAGCCTGTGCTTTCGGAGCCTATGTTTGCTGAAGGTGAAATCAAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR CCA 90 bp | GGTTTTGCTTTGATTTCACCTTCAGCAAACATAGGCTCCGAAAGCACAGGCTCAGTTTGGCCACTGATTTaGAGGATCTGGATATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFALISPSANIGSESTGSVWPLI*RIWICC Trigger: ACAGCATATCCAGATCCTCCAAATCAGTGGCCAAAC...TGAGCCTGTGCTTTCGGAGCCTATGTTTGCTGAAGGTGAAATCAAAGCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR CCA 90 bp | ATTTCACCTTCAGCAAACATAGGCTCCGAAAGCACAGGCTCAGAAAAGGCTTTTGAGGATGCAGAAGTTTaGCCACTGATTTGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSANIGSESTGSEKAFEDAEV*PLIWRI Trigger: GATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTC...AAAAGCCTTTTCTGAGCCTGTGCTTTCGGAGCCTATGTTTGCTGAAGGTGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR CCA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGATAGACCAGCAACTTTaGTGTCACATGGGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHFSSAVISVTSFYMCELIDQQL*CHMGAS Trigger: AGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTAT...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| 3UTR CAA 72 bp | CTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTaGGTGTCACATGGGAGCTTCTTAGACATGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPQTVVHRPAT*VSHGSFLDMQN Trigger: ATTCTGCATGTCTAAGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| 3UTR CAA 72 bp | TCATGGACCCCTAGCTTTCTGATTTCTGGGCATCCATaGTTGTTTTGCTATAATCCATTCTCCACAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SWTPSFLISGHP*LFCYNPFSTEP Trigger: CGGCTCTGTGGAGAATGGATTATAGCAAAACAACAATGGATGCCCAGAAATCAGAAAGCTAGGGGTCCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | GCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGCAGAAGTTTGGCCACTaGTTTGGAGGATCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ACLVHLHFGHFSSAVISVQKFGH*FGGSGY Trigger: ATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTG...CACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR TCA 90 bp | GCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGGAACCCTTTCTGACCTaGATGTTATATAGGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLVHLHFGHFSSAVISVEPFLT*MLYRGC Trigger: GCAACCCCTATATAACATTCAGGTCAGAAAGGGTTC...CACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAACTTGGGAGTCATTGGCTTCTCCGGCAATaGCCTATAAGGTTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLWHYSSPSCTNLKLGSHWLLRQ*PIRFCF Trigger: AAAGCAAAACCTTATAGGTCATTGCCGGAGAAGCCA...ATGACTCCCAAGTTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGCAGCTGTCATCTCAGTaGCCAGTTTTTATATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSSAVISVTSFYMCELQLSSQ*PVFICV Trigger: CACACATATAAAAACTGGTCACTGAGATGACAGCTG...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTTGGTGTCAGCTGTCATCTCAGTaGCCAGTTTTTATATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKTLLLKLLSIDQQLWCQLSSQ*PVFICV Trigger: CACACATATAAAAACTGGTCACTGAGATGACAGCTG...ACACCAAAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAAGTCCATAGAATTCTATaGCCTGGAAACTCCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPHSLWHYSSPSCTNLKVHRIL*PGNSPV Trigger: AACTGGGGAGTTTCCAGGTCATAGAATTCTATGGAC...TTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTACAAGGTCCATGATTaGTTTCTGGATCCCCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQYKVHD*FLDPLD Trigger: ATCGAGGGGATCCAGAAAGCAATCATGGACCTTGTA...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | CTTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCTTAGCTCTAAAAGTCTaGATGCAAGCTGAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPQAVGMSSSFAFWAFQLLALKV*MQAEDA Trigger: TGCATCCTCAGCTTGCATGCAGACTTTTAGAGCTAA...GAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAATGTTATATAGGGGTTaGCTCGGCGCATTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPKLLACLVHLHFGHFSSMLYRG*LGALTS Trigger: GGAAGTTAATGCGCCGAGGCAACCCCTATATAACAT...TGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR GCA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGCTCTCCTCTCTGTTTTaGCTTATGGATTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHFSSAVISVTSFYMCELLSSLF*LMDSSS Trigger: GGAAGAAGAATCCATAAGGCAAAACAGAGAGGAGAG...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | GTCCATAGACCAGCAACTTTGGTGTCACATGGGAGCTTCTTAGACATGCAGAATCTCTCCTCTCTGTTTTaGCTTATGGATTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHRPATLVSHGSFLDMQNLSSLF*LMDSSS Trigger: GGAAGAAGAATCCATAAGGCAAAACAGAGAGGAGAG...ATTCTGCATGTCTAAGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGCCCAACAGGTTTGATTaGCATGGTGAGTTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQPNRFD*HGEFLL Trigger: AAGCAAGAACTCACCATGCCAATCAAACCTGTTGGG...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCATCCATGATTGCTTTCTaGATCCCCTCGATTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPKLLACLVHLHFGHFSSSMIAF*IPSILP Trigger: TGGAAGAATCGAGGGGATCCAGAAAGCAATCATGGA...TGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | GCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGGTTTGGCCACTGATTTaGAGGATCTGGATATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACLVHLHFGHFSSAVISVVWPLI*RIWICC Trigger: ACAGCATATCCAGATCCTCCAAATCAGTGGCCAAAC...CACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATATAGACCAGCAACTTTaGTGTCACATGGGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVGMSSSFAFWAFQLSCHIDQQL*CHMGAS Trigger: AGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTAT...ATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | CCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGCTCTTCTTTCAGTATaGAATTCTCTTCCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLLACLVHLHFGHFSSAALLSV*NSLPQA Trigger: AGCTTGGGGAAGAGAATTCCATACTGAAAGAAGAGC...AGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| 3UTR CAA 72 bp | ATTCTCTTCCCCAAGCTGTTGGCATGTCTAGTTCATTaGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILFPKLLACLVH*HFGHFSSAVIS Trigger: TGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | GCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGATGAGTCTGCATGCAAGCTaGGGATGCAGAAGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYEAYIMLVKAVFAGKEMSLHAS*GCRSLA Trigger: GGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACT...CATCTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR TCA 90 bp | ATACCATTCATTTCTTGGCCTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCCTGTTAAGTGATCTGTaGTCAAGGCAGATCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPFISWPFSSQSLALQFTLLSDL*SRQILK Trigger: CTTCAAGATCTGCCTTGATCACAGATCACTTAACAG...GGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAGGCCAAGAAATGAATGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | TTCAAACAAAGAACCCTTTCTGACCTGTATCCAGCCATGTCGGGAATCTCAACATTAGCTCTAAAAGTCTaGATGCAAGCTGAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKQRTLSDLYPAMSGISTLALKV*MQAEDA Trigger: TGCATCCTCAGCTTGCATGCAGACTTTTAGAGCTAA...TGTTGAGATTCCCGACATGGCTGGATACAGGTCAGAAAGGGTTCTTTGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR CCA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGCTGATTTGGAGGATCTaGATATGCTGTTTAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHFSSAVISVTSFYMCELLIWRI*ICCLIH Trigger: GTGGATTAAACAGCATATCCAGATCCTCCAAATCAG...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR TCA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGGCAGGTTCTCTTTTCTaGTTAGACTGTGATAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHFSSAVISVTSFYMCELAGSLF*LDCDNL Trigger: AAGATTATCACAGTCTAATCAGAAAAGAGAACCTGC...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR TCA 90 bp | GAAGATGTTCTTTACCTTCTTCAGCACAGCATTAACACAGACTGCCAAATAAATAAGCTTGGGGTAATCTaGAATGTCTGGCTTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EDVLYLLQHSINTDCQINKLGVI*NVWLLR Trigger: CCGGAGAAGCCAGACATTTCAGATTACCCCAAGCTT...ATTTATTTGGCAGTCTGTGTTAATGCTGTGCTGAAGAAGGTAAAGAACATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR TCA 90 bp | GCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATTTAACCACTGTTAAGTaGTCTGTGATCAAGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVGMSSSFAFWAFQLSCHLTTVK*SVIKAD Trigger: ATCTGCCTTGATCACAGATCACTTAACAGTGGTTAA...ATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGGAACCCTTTCTGACCTaGTTAGACTGTGATAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQEPFLT*LDCDNL Trigger: AAGATTATCACAGTCTAATCAGGTCAGAAAGGGTTC...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGCTGACCTCTAAATGTTaGAGTGTTTCAGGAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQLTSKC*SVSGIV Trigger: GACAATTCCTGAAACACTTCAACATTTAGAGGTCAG...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | TCTGCAAAAATACCATTCATTTCTTGGCCTTTCTCCTCACAGTCTTTGGCACTATACAAGGTCCATGATTaGTTTCTGGATCCCCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAKIPFISWPFSSQSLALYKVHD*FLDPLD Trigger: ATCGAGGGGATCCAGAAAGCAATCATGGACCTTGTA...TAGTGCCAAAGACTGTGAGGAGAAAGGCCAAGAAATGAATGGTATTTTTGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGACAAGCTTGCAGGCCTaGGTAATGCTTGTCCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ADNSSIEFSPVSVHNESLTSLQA*VMLVLV Trigger: GACTAGGACAAGCATTACCCAGGCCTGCAAGCTTGT...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCCCTTTGAATAGTGCCTaGCACATAGTTAACACAATA | + |
|
Preference number: 4 (lower is better) Translates to: LPQAVGMSSSFAFWAFQLPLNSA*HIVNTI Trigger: TATTGTGTTAACTATGTGCCAGGCACTATTCAAAGG...GAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| 3UTR CAA 72 bp | CTCTTCTTTCAGTATGGAATTCTCTTCCCCAAGCTGTaGGCATGTCTAGTTCATTTGCATTTTGGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFFQYGILFPKL*ACLVHLHFGHF Trigger: GAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAGAGAATTCCATACTGAAAGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGCATCTACAAGGTCCATaGTTGCTTTCTGGATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAAYEAYIMLVKAVFAGKHLQGP*LLSGSP Trigger: AGGGGATCCAGAAAGCAATCATGGACCTTGTAGATG...CTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGCAGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR TCA 90 bp | ACCCCTAGCTTTCTGATTTCTGGGCATCCATTGTTGTTTTGCTATAATCCATTCATCTGGTTGTTGACTTaGCATCTCTACTTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSFLISGHPLLFCYNPFIWLLT*HLYLDV Trigger: GACATCCAAGTAGAGATGTCAAGTCAACAACCAGAT...GAATGGATTATAGCAAAACAACAATGGATGCCCAGAAATCAGAAAGCTAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | AATGAGAGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTTGGAGGATCTGGATATaGTGTTTAATCCACGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: NESLKTLLLKLLSIDQQLWRIWI*CLIHEL Trigger: TAATTCGTGGATTAAACAGCATATCCAGATCCTCCA...AAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR GCA 90 bp | GCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATGCCTGTATTCAGATTTaGTCATTCATTTCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVGMSSSFAFWAFQLSCHACIQI*SFISAD Trigger: ATCAGCTGAAATGAATGAGCAAATCTGAATACAGGC...ATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | ACCCCTAGCTTTCTGATTTCTGGGCATCCATTGTTGTTTTGCTATAATCCATTCTACAGTTCACCTAGCTaGACAAACCTAAAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSFLISGHPLLFCYNPFYSSPS*TNLKLG Trigger: CCCAAGTTTTAGGTTTGTGCAGCTAGGTGAACTGTA...GAATGGATTATAGCAAAACAACAATGGATGCCCAGAAATCAGAAAGCTAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | AATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGAAGACCGAGGATGCAGAAGTTTaGCCACTGATTTGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NSSIEFSPVSVHNESLKTEDAEV*PLIWRI Trigger: GATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTC...GGTCTTCAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR TCA 90 bp | GCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGATGTGGCTTCTCCGGCAATaGCCTATAAGGTTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AYEAYIMLVKAVFAGKEMWLLRQ*PIRFCF Trigger: AAAGCAAAACCTTATAGGTCATTGCCGGAGAAGCCA...CATCTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR TCA 90 bp | TCATGGACCCCTAGCTTTCTGATTTCTGGGCATCCATTGTTGTTTTGCTATAATTTAACCACTGTTAAGTaGTCTGTGATCAAGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWTPSFLISGHPLLFCYNLTTVK*SVIKAD Trigger: ATCTGCCTTGATCACAGATCACTTAACAGTGGTTAA...ATTATAGCAAAACAACAATGGATGCCCAGAAATCAGAAAGCTAGGGGTCCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | GCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGATGTACAAGGTCCATGATTaGTTTCTGGATCCCCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AYEAYIMLVKAVFAGKEMYKVHD*FLDPLD Trigger: ATCGAGGGGATCCAGAAAGCAATCATGGACCTTGTA...CATCTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR GCA 90 bp | GAAGATGTTCTTTACCTTCTTCAGCACAGCATTAACACAGACTGCCAAATAAATATGTTATATAGGGGTTaGCTCGGCGCATTAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDVLYLLQHSINTDCQINMLYRG*LGALTS Trigger: GGAAGTTAATGCGCCGAGGCAACCCCTATATAACAT...ATTTATTTGGCAGTCTGTGTTAATGCTGTGCTGAAGAAGGTAAAGAACATCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR GCA 90 bp | GCTGCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGCTCTCCTCTCTGTTTTaGCTTATGGATTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAYEAYIMLVKAVFAGKELSSLF*LMDSSS Trigger: GGAAGAAGAATCCATAAGGCAAAACAGAGAGGAGAG...CTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCATGGATGTTATTACTCTaGTTATTAGCAAGAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPKLLACLVHLHFGHFSSWMLLL*LLARSL Trigger: CAAGCTTCTTGCTAATAAGCAGAGTAATAACATCCA...TGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | AATGAGAGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTTGGATGTTATTACTCTaGTTATTAGCAAGAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NESLKTLLLKLLSIDQQLWMLLL*LLARSL Trigger: CAAGCTTCTTGCTAATAAGCAGAGTAATAACATCCA...AAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGAGTCCATAGAATTCTATGACCTGGAAACTCCCCAGTTTTTCTCTCTAGCCTGTATTCAGATTTaGTCATTCATTTCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSESIEFYDLETPQFFSLACIQI*SFISAD Trigger: ATCAGCTGAAATGAATGAGCAAATCTGAATACAGGC...TAGAGAGAAAAACTGGGGAGTTTCCAGGTCATAGAATTCTATGGACTCACTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR GCA 90 bp | TCTGCAAAAATACCATTCATTTCTTGGCCTTTCTCCTCACAGTCTTTGGCACTACAATTCACACTTTCCTaGTTTATACTCTTCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAKIPFISWPFSSQSLALQFTLS*FILFSG Trigger: GCCACTGAAGAGTATAAAGCAGGAAAGTGTGAATTG...TAGTGCCAAAGACTGTGAGGAGAAAGGCCAAGAAATGAATGGTATTTTTGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGCCCAACAGGTTTGATTaGCATGGTGAGTTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ADNSSIEFSPVSVHNESLPNRFD*HGEFLL Trigger: AAGCAAGAACTCACCATGCCAATCAAACCTGTTGGG...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGTCCATGATTGCTTTCTaGATCCCCTCGATTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ADNSSIEFSPVSVHNESLSMIAF*IPSILP Trigger: TGGAAGAATCGAGGGGATCCAGAAAGCAATCATGGA...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | GCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGATGTCCATGATTGCTTTCTaGATCCCCTCGATTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AYEAYIMLVKAVFAGKEMSMIAF*IPSILP Trigger: TGGAAGAATCGAGGGGATCCAGAAAGCAATCATGGA...CATCTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR CCA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGCCACCACCTTTTTCATaGACCCCTAGCTTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ADNSSIEFSPVSVHNESLPPPFS*TPSFLI Trigger: AATCAGAAAGCTAGGGGTCCATGAAAAAGGTGGTGG...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| 3UTR CAA 72 bp | ATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTaGAAGACCTTGCTCCTCAAACTGTTGTCCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IEFSPVSVHNES*KTLLLKLLSID Trigger: GTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR TCA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGCTGTTAAGTGATCTGTaGTCAAGGCAGATCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ADNSSIEFSPVSVHNESLLLSDL*SRQILK Trigger: CTTCAAGATCTGCCTTGATCACAGATCACTTAACAG...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGCTGATTTGGAGGATCTaGATATGCTGTTTAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAYEAYIMLVKAVFAGKELIWRI*ICCLIH Trigger: GTGGATTAAACAGCATATCCAGATCCTCCAAATCAG...CTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGCAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR GCA 90 bp | TCATGGACCCCTAGCTTTCTGATTTCTGGGCATCCATTGTTGTTTTGCTATAATCATCCATTGTTGTTTTaGTATAATCCATTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SWTPSFLISGHPLLFCYNHPLLF*YNPFST Trigger: TGTGGAGAATGGATTATAGCAAAACAACAATGGATG...ATTATAGCAAAACAACAATGGATGCCCAGAAATCAGAAAGCTAGGGGTCCATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR CCA 90 bp | GAAGATGTTCTTTACCTTCTTCAGCACAGCATTAACACAGACTGCCAAATAAATGCTCTGGGTTGTTTATaGGAGCTAATACATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EDVLYLLQHSINTDCQINALGCL*ELIHLL Trigger: AAGAAGATGTATTAGCTCCCATAAACAACCCAGAGC...ATTTATTTGGCAGTCTGTGTTAATGCTGTGCTGAAGAAGGTAAAGAACATCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR TCA 90 bp | GAAGATGTTCTTTACCTTCTTCAGCACAGCATTAACACAGACTGCCAAATAAATGCAGGTTCTCTTTTCTaGTTAGACTGTGATAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EDVLYLLQHSINTDCQINAGSLF*LDCDNL Trigger: AAGATTATCACAGTCTAATCAGAAAAGAGAACCTGC...ATTTATTTGGCAGTCTGTGTTAATGCTGTGCTGAAGAAGGTAAAGAACATCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGTGGAGGATCTGGATATaGTGTTTAATCCACGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SAAYEAYIMLVKAVFAGKWRIWI*CLIHEL Trigger: TAATTCGTGGATTAAACAGCATATCCAGATCCTCCA...CTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGCAGCACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR GCA 90 bp | GCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGATGTGGATGTTATTACTCTaGTTATTAGCAAGAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AYEAYIMLVKAVFAGKEMWMLLL*LLARSL Trigger: CAAGCTTCTTGCTAATAAGCAGAGTAATAACATCCA...CATCTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS GCA 90 bp | CTTCCCTCAGCAGACGACCAGATATGTCCCTTAGCTCTAAAAGTCTaGATGCAAGCTGAGGATGCAGAAGTTTGGCCACTGATTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSADDQICPLALKV*MQAEDAEVWPLIWR Trigger: CCTCCAAATCAGTGGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACTTTTAGAGCTAAGGGACATATCTGGTCGTCTGCTGAGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
||
| CDS CCA 90 bp | TCTGGATCCCCTCGACTGCCCACATATCCACCCAACAGGTTTGATTaGCATGGTGAGTTCTTGCTTGGGTTCCTAGTCCTTAACAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGSPRLPTYPPNRFD*HGEFLLGFLVLNKL Trigger: AAGCTTGTTAAGGACTAGGAACCCAAGCAAGAACTCACCATGCCAATCAAACCTGTTGGGTGGATATGTGGGCAGTCGAGGGGATCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477047.6 |
||
| CDS GCA 90 bp | GCTTTCTGGATCCCCTCGATTCTTCCAGAAAAGTTCTTCAACACCTaGCCACATATCCACCCAACAGGTTTGATTGGCATGGTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AFWIPSILPEKFFNT*PHIHPTGLIGMVSS Trigger: AGAACTCACCATGCCAATCAAACCTGTTGGGTGGATATGTGGGCAGGTGTTGAAGAACTTTTCTGGAAGAATCGAGGGGATCCAGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477715.5 ENST00000489917.1 |
||
| CDS-3UTR CAA 90 bp | GCTTTGATTTCACCTTCAGCAAACATAGGCTCCGAAAGCACAGGCTCAGAAAAGTGGCATGGTGAGTTCTaGCTTGGGTTCCTAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALISPSANIGSESTGSEKWHGEF*LGFLVL Trigger: AAGGACTAGGAACCCAAGCAAGAACTCACCATGCCA...CTTTTCTGAGCCTGTGCTTTCGGAGCCTATGTTTGCTGAAGGTGAAATCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS TCA 90 bp | AGACGACCAGATATGTCCCTTAGCTCTAAAAGTCTGCATGCAAGCTaGGGATGCAGAAGTTTGGCCACTGATTTGGAGGATCTGGATATG | + |
|
Preference number: 5 (lower is better) Translates to: RRPDMSLSSKSLHAS*GCRSLATDLEDLDM Trigger: CATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACTTTTAGAGCTAAGGGACATATCTGGTCGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
||
| CDS-3UTR CAA 90 bp | CTTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCACGACCGTGTATAGTTaGCCCCTGCTGAACTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPQAVGMSSSFAFWAFQLTTVYS*PLLNLK Trigger: TTTCAAGTTCAGCAGGGGCAAACTATACACGGTCGT...GAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS CCA 90 bp | AAAGTTCTTCAACACCTGCCCACATATCCACCCAACAGGTTTGATTaGCATGGTGAGTTCTTGCTTGGGTTCCTAGTCCTTAACAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KVLQHLPTYPPNRFD*HGEFLLGFLVLNKL Trigger: AAGCTTGTTAAGGACTAGGAACCCAAGCAAGAACTCACCATGCCAATCAAACCTGTTGGGTGGATATGTGGGCAGGTGTTGAAGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477715.5 ENST00000489917.1 |
||
| CDS CCA 90 bp | CCCTTAGCTCTAAAAGTCTGCATGCAAGCTGAGGATGCAGAAGTTTaGCCACTGATTTGGAGGATCTGGATATGCTGTTTAATCCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLALKVCMQAEDAEV*PLIWRIWICCLIHE Trigger: TTCGTGGATTAAACAGCATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACTTTTAGAGCTAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
||
| CDS-3UTR CAA 90 bp | AATGAGAGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTATCCACCCAACAGGTTaGATTGGCATGGTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NESLKTLLLKLLSIDQQLIHPTG*IGMVSS Trigger: AGAACTCACCATGCCAATCAAACCTGTTGGGTGGAT...AAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTTGGTGTATAGCCATCCTGATTTaGGATGTTTTCTGCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLKTLLLKLLSIDQQLWCIAILI*DVFCAG Trigger: ACCTGCGCAGAAAACATCCAAAATCAGGATGGCTAT...ACACCAAAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316087.12 |
||
| CDS-3UTR CAA 90 bp | GCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACGACCGTGTATAGTTaGCCCCTGCTGAACTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ACLVHLHFGHFSSAVISVTTVYS*PLLNLK Trigger: TTTCAAGTTCAGCAGGGGCAAACTATACACGGTCGT...CACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | GGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGTTTTTATATGTGTGAGCTGGCATGTCTAGTTCATTaGCATTTTGGGCATTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHFSSAVISVTSFYMCELACLVH*HFGHFS Trigger: GCTGAAATGCCCAAAATGCAAATGAACTAGACATGC...CAGCTCACACATATAAAAACTGGTCACTGAGATGACAGCTGAGCTGAAATGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTGATTTCACCTTCAGCAAACATAGGCTCCGAAAGCACAGGCTCAGAACTCAACAGCTCTGGGTaGTTTATGGGAGCTAATACA | + |
|
Preference number: 5 (lower is better) Translates to: FALISPSANIGSESTGSELNSSG*FMGANT Trigger: TGTATTAGCTCCCATAAACAACCCAGAGCTGTTGAG...TTCTGAGCCTGTGCTTTCGGAGCCTATGTTTGCTGAAGGTGAAATCAAAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS CCA 90 bp | AAAGTCTGCATGCAAGCTGAGGATGCAGAAGTTTGGCCACTGATTTaGAGGATCTGGATATGCTGTTTAATCCACGAATTAATGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVCMQAEDAEVWPLI*RIWICCLIHELMLL Trigger: GAGCAACATTAATTCGTGGATTAAACAGCATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
||
| CDS-3UTR CAA 90 bp | GTCCATAGACCAGCAACTTTGGTGTCACATGGGAGCTTCTTAGACATGCAGAATGTGAGCCAATGTTCTTaGAATGCCTGTATTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: VHRPATLVSHGSFLDMQNVSQCS*NACIQI Trigger: AATCTGAATACAGGCATTCAAAGAACATTGGCTCAC...ATTCTGCATGTCTAAGAAGCTCCCATGTGACACCAAAGTTGCTGGTCTATGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | CTTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCGTGAGCCAATGTTCTTaGAATGCCTGTATTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LPQAVGMSSSFAFWAFQLVSQCS*NACIQI Trigger: AATCTGAATACAGGCATTCAAAGAACATTGGCTCAC...GAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | AATGAGAGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTGCATGTCTAGTTCATTaGCATTTTGGGCATTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NESLKTLLLKLLSIDQQLACLVH*HFGHFS Trigger: GCTGAAATGCCCAAAATGCAAATGAACTAGACATGC...AAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTCTTTCCTTCAGGCTTTaGTATTTGCTCTTCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PKLLACLVHLHFGHFSSALSFRL*YLLFFQ Trigger: CTGAAAGAAGAGCAAATACAAAAGCCTGAAGGAAAG...AGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | GCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGAATACCATTCATTTCTaGGCCTTTCTCCTCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ACLVHLHFGHFSSAVISVNTIHF*AFLLTV Trigger: GACTGTGAGGAGAAAGGCCAAGAAATGAATGGTATT...CACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGTGGCATGGTGAGTTCTaGCTTGGGTTCCTAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ADNSSIEFSPVSVHNESLWHGEF*LGFLVL Trigger: AAGGACTAGGAACCCAAGCAAGAACTCACCATGCCA...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTTGCTATAATCCATTCTCCACAGAGCCGGGAGCATTCTTTCAAAAAGAAAATCCACCCAACAGGTTaGATTGGCATGGTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CFAIIHSPQSREHSFKKKIHPTG*IGMVSS Trigger: AGAACTCACCATGCCAATCAAACCTGTTGGGTGGAT...TTTCTTTTTGAAAGAATGCTCCCGGCTCTGTGGAGAATGGATTATAGCAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCCAAGCTGTTGGCATGTCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCCTGTTTACCAATCTaGCATATTATGTTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPKLLACLVHLHFGHFSSACLPI*HIMFQS Trigger: AGACTGGAACATAATATGCAAGATTGGTAAACAGGC...TGAGCTGAAATGCCCAAAATGCAAATGAACTAGACATGCCAACAGCTTGGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | TCTAGTTCATTTGCATTTTGGGCATTTCAGCTCAGCTGTCATCTCAGTGACCAGGCCTGTTTACCAATCTaGCATATTATGTTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSFAFWAFQLSCHLSDQACLPI*HIMFQS Trigger: AGACTGGAACATAATATGCAAGATTGGTAAACAGGC...CTGGTCACTGAGATGACAGCTGAGCTGAAATGCCCAAAATGCAAATGAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGATCCACCCAACAGGTTaGATTGGCATGGTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAAYEAYIMLVKAVFAGKIHPTG*IGMVSS Trigger: AGAACTCACCATGCCAATCAAACCTGTTGGGTGGAT...CTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGCAGCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489917.1 |
||
| CDS-3UTR CAA 90 bp | GCTGCATATGAAGCATATATTATGCTAGTTAAAGCAGTCTTTGCTGGAAAGGAGATAGCCATCCTGATTTaGGATGTTTTCTGCGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AAYEAYIMLVKAVFAGKEIAILI*DVFCAG Trigger: ACCTGCGCAGAAAACATCCAAAATCAGGATGGCTAT...CTCCTTTCCAGCAAAGACTGCTTTAACTAGCATAATATATGCTTCATATGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489917.1 |
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| CDS-3UTR CAA 90 bp | CTCGACTTTAGTCTCATATATCTGGTTGTTGACTTGACATCTCTACTTGGATGTGTCCATAATGAGAGCTaGAAGACCTTGCTCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: LDFSLIYLVVDLTSLLGCVHNES*KTLLLK Trigger: TTTGAGGAGCAAGGTCTTCAAGCTCTCATTATGGAC...ACATCCAAGTAGAGATGTCAAGTCAACAACCAGATATATGAGACTAAAGTCGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| CDS-3UTR CAA 90 bp | CTTTCTCCTCACAGTCTTTGGCACTACAGTTCACCTAGCTGCACAAACCTAAAATTCAGGCTTTTGTATTaGCTCTTCTTTCAGTATGGA | + |
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Preference number: 5 (lower is better) Translates to: LSPHSLWHYSSPSCTNLKFRLLY*LFFQYG Trigger: TCCATACTGAAAGAAGAGCAAATACAAAAGCCTGAA...TTTTAGGTTTGTGCAGCTAGGTGAACTGTAGTGCCAAAGACTGTGAGGAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| CDS-3UTR CAA 90 bp | AATGAGAGCTTGAAGACCTTGCTCCTCAAACTGTTGTCCATAGACCAGCAACTTCTACTACTGCTACTGTaGTTATTACTTTTTATCCCC | + |
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Preference number: 5 (lower is better) Translates to: NESLKTLLLKLLSIDQQLLLLLL*LLLFIP Trigger: GGGGATAAAAAGTAATAACAACAGTAGCAGTAGTAG...AAGTTGCTGGTCTATGGACAACAGTTTGAGGAGCAAGGTCTTCAAGCTCTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| CDS-3UTR CAA 90 bp | AATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGAAGACCCTTTCCTTCAGGCTTTaGTATTTGCTCTTCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: NSSIEFSPVSVHNESLKTLSFRL*YLLFFQ Trigger: CTGAAAGAAGAGCAAATACAAAAGCCTGAAGGAAAG...GGTCTTCAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS-3UTR CAA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGTCTGGGCATCCATTGTaGTTTTGCTATAATCCATTC | + |
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Preference number: 5 (lower is better) Translates to: ADNSSIEFSPVSVHNESLSGHPL*FCYNPF Trigger: GAATGGATTATAGCAAAACAACAATGGATGCCCAGA...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477715.5 |
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| CDS-3UTR CAA 90 bp | GCTGATAATAGTTCCATAGAATTTTCTCCAGTTTCAGTCCATAATGAGAGCTTGTTCAGGCTTTTGTATTaGCTCTTCTTTCAGTATGGA | + |
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Preference number: 5 (lower is better) Translates to: ADNSSIEFSPVSVHNESLFRLLY*LFFQYG Trigger: TCCATACTGAAAGAAGAGCAAATACAAAAGCCTGAA...CAAGCTCTCATTATGGACTGAAACTGGAGAAAATTCTATGGAACTATTATCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000316087.12 ENST00000477715.5 |
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| CDS CCA 72 bp | CCTCGACTGCCCACATATCCACCCAACAGGTTTGATTaGCATGGTGAGTTCTTGCTTGGGTTCCTAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PRLPTYPPNRFD*HGEFLLGFLVL Trigger: AAGGACTAGGAACCCAAGCAAGAACTCACCATGCCAATCAAACCTGTTGGGTGGATATGTGGGCAGTCGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477047.6 |
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| CDS CAA 90 bp | CTGCCCACATATCCACCCAACAGGTTTGATTGGCATGGTGAGTTCTaGCTTGGGTTCCTAGTCCTTAACAAGCTTGCAGGCCTGGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LPTYPPNRFDWHGEF*LGFLVLNKLAGLGN Trigger: ATTACCCAGGCCTGCAAGCTTGTTAAGGACTAGGAACCCAAGCAAGAACTCACCATGCCAATCAAACCTGTTGGGTGGATATGTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000477715.5 ENST00000489917.1 |
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| CDS CCA 72 bp | CAACACCTGCCCACATATCCACCCAACAGGTTTGATTaGCATGGTGAGTTCTTGCTTGGGTTCCTAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QHLPTYPPNRFD*HGEFLLGFLVL Trigger: AAGGACTAGGAACCCAAGCAAGAACTCACCATGCCAATCAAACCTGTTGGGTGGATATGTGGGCAGGTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477715.5 ENST00000489917.1 |
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| CDS CAA 72 bp | TATCCACCCAACAGGTTTGATTGGCATGGTGAGTTCTaGCTTGGGTTCCTAGTCCTTAACAAGCTTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: YPPNRFDWHGEF*LGFLVLNKLAG Trigger: GCCTGCAAGCTTGTTAAGGACTAGGAACCCAAGCAAGAACTCACCATGCCAATCAAACCTGTTGGGTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000477715.5 ENST00000489917.1 |
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| CDS GCA 72 bp | ATCCCCTCGATTCTTCCAGAAAAGTTCTTCAACACCTaGCCACATATCCACCCAACAGGTTTGATTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: IPSILPEKFFNT*PHIHPTGLIGM Trigger: CATGCCAATCAAACCTGTTGGGTGGATATGTGGGCAGGTGTTGAAGAACTTTTCTGGAAGAATCGAGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477715.5 ENST00000489917.1 |
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| CDS TCA 72 bp | GATATGTCCCTTAGCTCTAAAAGTCTGCATGCAAGCTaGGGATGCAGAAGTTTGGCCACTGATTTGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: DMSLSSKSLHAS*GCRSLATDLED Trigger: ATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACTTTTAGAGCTAAGGGACATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
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| CDS CCA 72 bp | CTAAAAGTCTGCATGCAAGCTGAGGATGCAGAAGTTTaGCCACTGATTTGGAGGATCTGGATATGCTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LKVCMQAEDAEV*PLIWRIWICCL Trigger: TAAACAGCATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTCAGCTTGCATGCAGACTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
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| CDS GCA 72 bp | AAATTCATCTTTAAACTCATCTACAAGGTCCATGATTaGTTTCTGGATCCCCTCGACTGCCCACATATCCAC | + |
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Preference number: 6 (lower is better) Translates to: KFIFKLIYKVHD*FLDPLDCPHIH Trigger: GTGGATATGTGGGCAGTCGAGGGGATCCAGAAAGCAATCATGGACCTTGTAGATGAGTTTAAAGATGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477047.6 |
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| CDS CCA 72 bp | GAGGATGCAGAAGTTTGGCCACTGATTTGGAGGATCTaGATATGCTGTTTAATCCACGAATTAATGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: EDAEVWPLIWRI*ICCLIHELMLL Trigger: GAGCAACATTAATTCGTGGATTAAACAGCATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
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| CDS CCA 72 bp | ATGCAAGCTGAGGATGCAGAAGTTTGGCCACTGATTTaGAGGATCTGGATATGCTGTTTAATCCACGAATTA | + |
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Preference number: 6 (lower is better) Translates to: MQAEDAEVWPLI*RIWICCLIHEL Trigger: TAATTCGTGGATTAAACAGCATATCCAGATCCTCCAAATCAGTGGCCAAACTTCTGCATCCTCAGCTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477047.6 ENST00000489917.1 |
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| CDS GCA 72 bp | AAATTCATCTTTAAACTCATCTACAAGGTCCATGATTaGTTTCTGGATCCCCTCGATTCTTCCAGAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: KFIFKLIYKVHD*FLDPLDSSRKV Trigger: AACTTTTCTGGAAGAATCGAGGGGATCCAGAAAGCAATCATGGACCTTGTAGATGAGTTTAAAGATGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000274432.13 ENST00000316087.12 ENST00000477715.5 ENST00000489917.1 |
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