RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPATA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000042317

Ensembl transcript IDs: ENST00000045347.11, ENST00000356583.9, ENST00000393545.9, ENST00000553303.1, ENST00000553626.5, ENST00000553885.5, ENST00000553908.5, ENST00000554102.5, ENST00000554168.5, ENST00000554802.1, ENST00000555356.5, ENST00000555401.5, ENST00000555515.5, ENST00000555534.5, ENST00000555715.5, ENST00000556406.5, ENST00000556553.5, ENST00000556666.5, ENST00000556870.5, ENST00000557248.5, ENST00000557724.5

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTaGATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: SAIQGSRAQFPGPGG*IIHTGRGGTGVLLR
Trigger: CCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR GCA 90 bp TATGCCTTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCTaGTGTAGCAGCTGGGAGCAGGAGACAGCCAAGTCCACATCCAGG +
Preference number: 1 (lower is better)
Translates to: YALNQGSFLAKVELG*CSSWEQETAKSTSR
Trigger: CCTGGATGTGGACTTGGCTGTCTCCTGCTCCCAGCTGCTACAGCAGCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAAGGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555715.5
3UTR TCA 90 bp GTTCAGAATGTTTATCCAAAAGATCCCCACTGGGTGCTTTCGAAATaGCTAACTGAAACCGGTGGGAATTTGGGAATGTGCTTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: VQNVYPKDPHWVLSK*LTETGGNLGMCFWA
Trigger: GGCCCAGAAGCACATTCCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAAAGCACCCAGTGGGGATCTTTTGGATAAACATTCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
3UTR CCA 90 bp TCTTCGTTGTTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTGCTCAAGTG +
Preference number: 1 (lower is better)
Translates to: SSLLVCILYAGTHAY*NRAVYCSITFGAQV
Trigger: CACTTGAGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAACAACGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554168.5
3UTR CCA 90 bp AGCAGTGTTAAGAGGCAAGTTTACAGTGCTAAATACACTTTATGCTaGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTAC +
Preference number: 1 (lower is better)
Translates to: SSVKRQVYSAKYTLC*YSRLLEPSSLLQHY
Trigger: GTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGCACTGTAAACTTGCCTCTTAACACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555356.5
3UTR GCA 90 bp AAAAGCAGTGTTAAGAGGCAAGTTTACAGTGCTAAATACACTTTATaGTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCAT +
Preference number: 1 (lower is better)
Translates to: KSSVKRQVYSAKYTL*WYSRLLEPSSLLQH
Trigger: ATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGCACTGTAAACTTGCCTCTTAACACTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555356.5
3UTR CCA 90 bp AAGTTTACAGTGCTAAATACACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTGCTCAAGTG +
Preference number: 1 (lower is better)
Translates to: KFTVLNTLYAGTHAY*NRAVYCSITFGAQV
Trigger: CACTTGAGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGCACTGTAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555356.5
3UTR CCA 90 bp GGTCAATTAATACACTTGAATAAAGATTTGCTATCAATTTCACAGTaGGCTTGCAGAGCTCTTCATGTGGCCACCTCTATAGTAGAACAT +
Preference number: 1 (lower is better)
Translates to: GQLIHLNKDLLSISQ*ACRALHVATSIVEH
Trigger: ATGTTCTACTATAGAGGTGGCCACATGAAGAGCTCTGCAAGCCCACTGTGAAATTGATAGCAAATCTTTATTCAAGTGTATTAATTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554802.1
3UTR GCA 90 bp TTAATACACTTGAATAAAGATTTGCTATCAATTTCACAGTGGGCTTaGAGAGCTCTTCATGTGGCCACCTCTATAGTAGAACATATGCTA +
Preference number: 1 (lower is better)
Translates to: LIHLNKDLLSISQWA*RALHVATSIVEHML
Trigger: TAGCATATGTTCTACTATAGAGGTGGCCACATGAAGAGCTCTGCAAGCCCACTGTGAAATTGATAGCAAATCTTTATTCAAGTGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554802.1
3UTR-3UTR GCA 90 bp GGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTCTCCCTCTTCCTTTaGGCAGGCCTGGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GPYLGRTEVALTARLASRLSLFL*AGLGSS
Trigger: GGAGCTGCCCAGGCCTGCGCAAAGGAAGAGGGAGAG...CCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
3UTR-3UTR GCA 90 bp TGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGCTCTCCCTCTTCCTTTaGGCAGGCCTGGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: WTISGKDRGCSDCEAGKQLSLFL*AGLGSS
Trigger: GGAGCTGCCCAGGCCTGCGCAAAGGAAGAGGGAGAG...CTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
3UTR-3UTR CCA 90 bp AGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGATGGACGGGGAGGAACTaGAGTTCTTCTCAGGACCAT +
Preference number: 2 (lower is better)
Translates to: RAQFPGPGGCIIHTGRGGWTGRN*SSSQDH
Trigger: ATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCA...TCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR-3UTR GCA 90 bp TGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGTATCCTAGGTATATTTaGACCCAACACTGGAGCACC +
Preference number: 2 (lower is better)
Translates to: CFWAFCHTGLQSSVSGARYPRYI*TQHWST
Trigger: GGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATA...CCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR TCA 90 bp ATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTTGGGTGCTTTCGAAATaGCTAACTGAAACCGGTGGG +
Preference number: 2 (lower is better)
Translates to: IQGSRAQFPGPGGCIIHTWVLSK*LTETGG
Trigger: CCCACCGGTTTCAGTTAGTCATTTCGAAAGCACCCA...AGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
3UTR-3UTR GCA 90 bp TCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: SAIQGSRAQFPGPGGCIIMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...GATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR-3UTR CCA 90 bp CTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGTTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 2 (lower is better)
Translates to: LQSSVSGARRLHNPHWTGFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...CCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR CCA 90 bp CTTTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCGGCTGCTGTAGCAGCTaGGAGCAGGAGACAGCCAAG +
Preference number: 2 (lower is better)
Translates to: LYAGTHAYWNRAVYCSFGGCCSS*EQETAK
Trigger: CTTGGCTGTCTCCTGCTCCCAGCTGCTACAGCAGCC...GCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555715.5
3UTR-3UTR GCA 90 bp GGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCTATCCTAGGTATATTTaGACCCAACACTGGAGCACC +
Preference number: 2 (lower is better)
Translates to: GPGGCIIHTGRGGTGVLLYPRYI*TQHWST
Trigger: GGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATA...GAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR GCA 90 bp ATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: IQGSRAQFPGPGGCIIHTMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...AGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR-3UTR GCA 90 bp GTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTGGGAAGGACAGAGGTTaGTCTGACTGCGAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VLTLTGTEQSTAALAERIGKDRG*SDCEAG
Trigger: GCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCC...AATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557724.5
3UTR-3UTR CCA 90 bp AGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGATTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 2 (lower is better)
Translates to: RAQFPGPGGCIIHTGRGGFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...TCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR CCA 90 bp CAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACTAGACCAAAATTTCTaGGATGCAGCAAAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: QGSRAQFPGPGGCIIHTGLDQNF*DAAKAV
Trigger: CACTGCTTTTGCTGCATCCCAGAAATTTTGGTCTAG...TCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
3UTR-3UTR GCA 90 bp CTTTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCAAAGTAGAGCTGGGCTaGTGTAGCAGCTGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: LYAGTHAYWNRAVYCSFGKVELG*CSSWEQ
Trigger: CTGCTCCCAGCTGCTACAGCAGCCCAGCTCTACTTT...GCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555715.5
3UTR-3UTR CCA 90 bp TCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCTAGACCAAAATTTCTaGGATGCAGCAAAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: SAIQGSRAQFPGPGGCIILDQNF*DAAKAV
Trigger: CACTGCTTTTGCTGCATCCCAGAAATTTTGGTCTAG...GATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
3UTR-3UTR TCA 90 bp TTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGGGAGAGTGCTTAGTCTaGGAGAAGAGGAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: LCWYSRLLEPSSLLQLWLGECLV*EKRSQC
Trigger: GCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCC...CAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555715.5
3UTR-3UTR GCA 90 bp GGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCTATCCTAGGTATATTTaGACCCAACACTGGAGCACC +
Preference number: 2 (lower is better)
Translates to: GGCIIHTGRGGTGVLLRTYPRYI*TQHWST
Trigger: GGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATA...GGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR GCA 90 bp TTACTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTGGACCATATCTGGGACTCTCCCTCTTCCTTTaGGCAGGCCTGGGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LLLVLKCPLNRHGGPYLGLSLFL*AGLGSS
Trigger: GGAGCTGCCCAGGCCTGCGCAAAGGAAGAGGGAGAG...TCCCAGATATGGTCCACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
3UTR-3UTR TCA 90 bp TGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGACAGCCATGTGATTCTTaGCCAGCTGGAGAGTGCTTA +
Preference number: 2 (lower is better)
Translates to: WYSRLLEPSSLLQLWLKGQPCDS*PAGECL
Trigger: TAAGCACTCTCCAGCTGGTCAAGAATCACATGGCTG...TCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555715.5
3UTR-3UTR GCA 90 bp GTTGTTGGTCTGCATCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCGGGAAGGACAGAGGTTaGTCTGACTGCGAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VVGLHQNFWDAAKAVLRGGKDRG*SDCEAG
Trigger: GCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCC...GCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGATGCAGACCAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555356.5
3UTR-3UTR GCA 90 bp CAGTCTACTGCAGCATTACTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTAGAGGTTGCTCTGACTaGGAGGCTGGCAAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: QSTAALLLVLKCPLNRHGRGCSD*EAGKQA
Trigger: AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCT...ACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGTAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
3UTR-3UTR TCA 90 bp TCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTTTATGGAGAGTGCTTAGTCTaGGAGAAGAGGAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: SRLLEPSSLLQLWLKGFYGECLV*EKRSQC
Trigger: GCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCC...ATAAAATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555715.5
ENST00000557724.5
3UTR-3UTR GCA 90 bp CTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGCCAAAATTTCTGGGATaGAGCAAAAGCAGTGTTAAG +
Preference number: 2 (lower is better)
Translates to: LHNPHWTGRNWSSSQDHLPKFLG*SKSSVK
Trigger: CTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGG...CAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
3UTR-3UTR CCA 90 bp GGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 2 (lower is better)
Translates to: GRGGTGVLLRTICDDFTGFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...TCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR GCA 90 bp TATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGTATCCTAGGTATATTTaGACCCAACACTGGAGCACC +
Preference number: 2 (lower is better)
Translates to: YVDLGVVSLKRVLVTLQRYPRYI*TQHWST
Trigger: GGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATA...CCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR GCA 90 bp GATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: DLCRLRCSLSEEGTSDLAMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...TGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR-3UTR GCA 90 bp TCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTTTATGAGAAGAGGAGTCAGTaGAAAAAGCATTACTTTTGG +
Preference number: 2 (lower is better)
Translates to: SRLLEPSSLLQLWLKGFYEKRSQ*KKHYFW
Trigger: CCAAAAGTAATGCTTTTTGCACTGACTCCTCTTCTC...ATAAAATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557724.5
3UTR-3UTR GCA 90 bp TGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGATCCAAAATTTCTGGGATaGAGCAAAAGCAGTGTTAAG +
Preference number: 2 (lower is better)
Translates to: CRLRCSLSEEGTSDLAKDPKFLG*SKSSVK
Trigger: CTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGG...ATCCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
3UTR-3UTR CCA 90 bp ATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTTTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 2 (lower is better)
Translates to: MTLLDLCRLRCSLSEEGTFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...AGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR CCA 90 bp TTCTCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTATTTGCACCCAACACTaGAGCACCCAGATTCATACA +
Preference number: 2 (lower is better)
Translates to: FSGPFVMTLLDLCRLRCSICTQH*STQIHT
Trigger: TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAAT...ACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
3UTR-3UTR TCA 90 bp TCTGTTTTTAAAGTGCGAGGAGTGAATGGCAATTGTTTGTTAGAAAAGAGTTCATTCGAAATGACTAACTaGAACCGGTGGGAATTTGGG +
Preference number: 2 (lower is better)
Translates to: SVFKVRGVNGNCLLEKSSFEMTN*NRWEFG
Trigger: CCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAA...TGAACTCTTTTCTAACAAACAATTGCCATTCACTCCTCGCACTTTAAAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
3UTR-3UTR GCA 90 bp ACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTTCTTCGTTGTTGGTCTaGATCTATCCTAGGTATATT +
Preference number: 2 (lower is better)
Translates to: TLLDLCRLRCSLSEEGTSSSLLV*IYPRYI
Trigger: AATATACCTAGGATAGATGCAGACCAACAACGAAGA...ACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR GCA 72 bp CAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTaGATAATCCACACTGGACGGGGAGGAACTGGAGTT +
Preference number: 3 (lower is better)
Translates to: QGSRAQFPGPGG*IIHTGRGGTGV
Trigger: AACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR CCA 72 bp TCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTaGACGGGGAGGAACTGGAGTTCTTCTCAGGACCAT +
Preference number: 3 (lower is better)
Translates to: SVSGARRLHNPH*TGRNWSSSQDH
Trigger: ATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR-3UTR CAA 90 bp CCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATATTTCTCTCTTCGTTGTaGGTCTGCATCTATCCTAGG +
Preference number: 3 (lower is better)
Translates to: PSAIQGSRAQFPGPGGCIFLSSL*VCIYPR
Trigger: CCTAGGATAGATGCAGACCAACAACGAAGAGAGAAA...TATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR CAA 90 bp GCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAGGGTACTAGTGACCTaGCAAAGGATGAAAATCCAT +
Preference number: 3 (lower is better)
Translates to: AFCHTGLQSSVSGARRLHRVLVT*QRMKIH
Trigger: ATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCT...ATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR-3UTR CAA 90 bp GGAATGTGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGAGTTTCTCTCTTCGTaGTTGGTCTGCATCTATCCT +
Preference number: 3 (lower is better)
Translates to: GMCFWAFCHTGLQSSVSGEFLSS*LVCIYP
Trigger: AGGATAGATGCAGACCAACAACGAAGAGAGAAACTC...CCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR CCA 72 bp CTAACTGAAACCGGTGGGAATTTGGGAATGTGCTTCTaGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTT +
Preference number: 3 (lower is better)
Translates to: LTETGGNLGMCF*AFCHTGLQSSV
Trigger: AACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAAATTCCCACCGGTTTCAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
3UTR TCA 72 bp AAAAGATCCCCACTGGGTGCTTTCGAAATGACTAACTaGAACCGGTGGGAATTTGGGAATGTGCTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: KRSPLGAFEMTN*NRWEFGNVLLG
Trigger: GCCCAGAAGCACATTCCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAAAGCACCCAGTGGGGATCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
3UTR TCA 72 bp GTTTATCCAAAAGATCCCCACTGGGTGCTTTCGAAATaGCTAACTGAAACCGGTGGGAATTTGGGAATGTGC +
Preference number: 3 (lower is better)
Translates to: VYPKDPHWVLSK*LTETGGNLGMC
Trigger: GCACATTCCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAAAGCACCCAGTGGGGATCTTTTGGATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
3UTR CCA 72 bp TTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCATTACTTTTGGT +
Preference number: 3 (lower is better)
Translates to: LVCILYAGTHAY*NRAVYCSITFG
Trigger: ACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554168.5
3UTR-3UTR CAA 90 bp TATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGGAGTTTCTCTCTTCGTaGTTGGTCTGCATCTATCCT +
Preference number: 3 (lower is better)
Translates to: YVDLGVVSLKRVLVTLQREFLSS*LVCIYP
Trigger: AGGATAGATGCAGACCAACAACGAAGAGAGAAACTC...CCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR GCA 72 bp TCTTCGTTGTTGGTCTGCATCTATCCTAGGTATATTTaGACCCAACACTGGAGCACCCAGATTCATACAAGT +
Preference number: 3 (lower is better)
Translates to: SSLLVCIYPRYI*TQHWSTQIHTS
Trigger: ACTTGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATAGATGCAGACCAACAACGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
3UTR CCA 72 bp GTGCTAAATACACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCATTACTTTTGGT +
Preference number: 3 (lower is better)
Translates to: VLNTLYAGTHAY*NRAVYCSITFG
Trigger: ACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555356.5
3UTR-3UTR CAA 90 bp CTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGAGTTTCTCTCTTCGTaGTTGGTCTGCATCTATCCT +
Preference number: 3 (lower is better)
Translates to: LDLCRLRCSLSEEGTSDLEFLSS*LVCIYP
Trigger: AGGATAGATGCAGACCAACAACGAAGAGAGAAACTC...AAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR CAA 90 bp ACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTTTTCTCTCTTCGTTGTaGGTCTGCATCTATCCTAGG +
Preference number: 3 (lower is better)
Translates to: TLLDLCRLRCSLSEEGTSFLSSL*VCIYPR
Trigger: CCTAGGATAGATGCAGACCAACAACGAAGAGAGAAA...ACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
3UTR-3UTR CAA 90 bp TCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCAGGGTACTAGTGACCTaGCAAAGGATGAAAATCCAT +
Preference number: 3 (lower is better)
Translates to: SGPFVMTLLDLCRLRCSLRVLVT*QRMKIH
Trigger: ATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCT...GAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
3UTR GCA 72 bp ATTCATACAAGTACTTCTAGACCAAAATTTCTGGGATaGAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGT +
Preference number: 3 (lower is better)
Translates to: IHTSTSRPKFLG*SKSSVKRQVYS
Trigger: ACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGGTCTAGAAGTACTTGTATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp CAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGCCGGGGCCCGGAGGCTaGATAATCCACACTGGACGG +
Preference number: 4 (lower is better)
Translates to: QSSVSGARRLHNPHWTGRPGPGG*IIHTGR
Trigger: CCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGG...CCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp ACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGGGAGCCGACGGGGGCTaGAGCAGCAGGGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: TGLQSSVSGARRLHNPHWGADGG*SSRETV
Trigger: AACGGTTTCCCTGCTGCTGCAGCCCCCGTCGGCTCC...CCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR GCA 90 bp CCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAGGAGCCGACGGGGGCTaGAGCAGCAGGGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: PSAIQGSRAQFPGPGGCIGADGG*SSRETV
Trigger: AACGGTTTCCCTGCTGCTGCAGCCCCCGTCGGCTCC...TATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp GCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATCCGGCAGTGGAGGACTaGAAAAGAGGAGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: AFCHTGLQSSVSGARRLHPAVED*KRGADG
Trigger: CCCGTCGGCTCCTCTTTTCCAGTCCTCCACTGCCGG...ATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp CTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGGGACAGAGGTTGCTCTaGCTCTCCGGCTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LQSSVSGARRLHNPHWTGGQRLL*LSGCHP
Trigger: TGGATGGCAGCCGGAGAGTCAGAGCAACCTCTGTCC...CCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAAGGACAGAGGTTaGTCTGACTCTCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLQSSVSGARRLHNPHWTGKDRG*SDSPAA
Trigger: GGCAGCCGGAGAGTCAGAGCAACCTCTGTCCTTCCC...CGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp CTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGGGGAAGGACAGAGGTTaGTCTGACTCTCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LQSSVSGARRLHNPHWTGGKDRG*SDSPAA
Trigger: GGCAGCCGGAGAGTCAGAGCAACCTCTGTCCTTCCC...CCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCCCGGGGCCCGGAGGCTaGATAATCCACACTGGACGG +
Preference number: 4 (lower is better)
Translates to: GPGGCIIHTGRGGTGVLLPGPGG*IIHTGR
Trigger: CCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGG...GAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATCAGCAGGGAAACCGTTaGCAGGCCGTTGCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: AFCHTGLQSSVSGARRLHQQGNR*QAVAKG
Trigger: GCCCTTAGCAACGGCCTGGCAACGGTTTCCCTGCTG...ATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp CAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGAGGACAGAGGTTGCTCTaGCTCTCCGGCTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: QGSRAQFPGPGGCIIHTGGQRLL*LSGCHP
Trigger: TGGATGGCAGCCGGAGAGTCAGAGCAACCTCTGTCC...TCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp ATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTCCGGGGCCCGGAGGCTaGATAATCCACACTGGACGG +
Preference number: 4 (lower is better)
Translates to: IQGSRAQFPGPGGCIIHTPGPGG*IIHTGR
Trigger: CCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGG...AGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp CAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGTGCTTCTGGGCCTTCTaGCATACAGGGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QSSVSGARRLHNPHWTGRCFWAF*HTGLQS
Trigger: GCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCA...CCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp AGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGGAGCCGACGGGGGCTaGAGCAGCAGGGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: RHGGPYLGRTEVALTARLGADGG*SSRETV
Trigger: AACGGTTTCCCTGCTGCTGCAGCCCCCGTCGGCTCC...CAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp CTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LQSSVSGARRLHNPHWTGSGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...CCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGCAGCAGGGAAACCGTTaGCAGGCCGTTGCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: SVSGARRLHNPHWTGRNWQQGNR*QAVAKG
Trigger: GCCCTTAGCAACGGCCTGGCAACGGTTTCCCTGCTG...CCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR GCA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTGGCCTTGCACTCAGCTaGCCGGACCCGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TISGKDRGCSDCEAGKQAGLALS*PDPRLG
Trigger: TCCCAGCCTCGGGTCCGGGCAGCTGAGTGCAAGGCC...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp GGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCCTGCATAATCCACACTaGACGGGGAGGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: GPSAIQGSRAQFPGPGGCLHNPH*TGRNWS
Trigger: ACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG...GCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTGGAGCCGACGGGGGCTaGAGCAGCAGGGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: TISGKDRGCSDCEAGKQAGADGG*SSRETV
Trigger: AACGGTTTCCCTGCTGCTGCAGCCCCCGTCGGCTCC...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp TGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGGAGCCGACGGGGGCTaGAGCAGCAGGGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: WTISGKDRGCSDCEAGKQGADGG*SSRETV
Trigger: AACGGTTTCCCTGCTGCTGCAGCCCCCGTCGGCTCC...CTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp AGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGATCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RAQFPGPGGCIIHTGRGGSGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...TCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp AGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGCCGGCAGTGGAGGACTaGAAAAGAGGAGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: RHGGPYLGRTEVALTARLPAVED*KRGADG
Trigger: CCCGTCGGCTCCTCTTTTCCAGTCCTCCACTGCCGG...CAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp GCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGCCCAGCCCCGGCAGTaGAGGACTGGAAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ARRLHNPHWTGRNWSSSQAQPRQ*RTGKEE
Trigger: CTCCTCTTTTCCAGTCCTCCACTGCCGGGGCTGGGC...CTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp GCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGGACAGAGGTTGCTCTaGCTCTCCGGCTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: ARRLHNPHWTGRNWSSSQGQRLL*LSGCHP
Trigger: TGGATGGCAGCCGGAGAGTCAGAGCAACCTCTGTCC...CTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR TCA 90 bp AATAGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGGGCGGCGGTAGCCCCTaGCAGCTGCCCTTTACCTCT +
Preference number: 4 (lower is better)
Translates to: NRHGGPYLGRTEVALTARGGGSP*QLPFTS
Trigger: AGAGGTAAAGGGCAGCTGTCAGGGGCTACCGCCGCC...CCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp GCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGGGAAGGACAGAGGTTaGTCTGACTCTCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARRLHNPHWTGRNWSSSQGKDRG*SDSPAA
Trigger: GGCAGCCGGAGAGTCAGAGCAACCTCTGTCCTTCCC...CTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp AGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGTAGCCCCTGACAGCTaGCCTTTACCTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RHGGPYLGRTEVALTARLVAPDS*PLPLRL
Trigger: CAGCCGGAGAGGTAAAGGGCAGCTGTCAGGGGCTAC...CAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp CACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAGGGAAGGACAGAGGTTaGTCTGACTGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HGGPYLGRTEVALTARLAGKDRG*SDCEAG
Trigger: GCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCC...TGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp CTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGTTGGGAATGTGCTTCTaGGCCTTCTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: LQSSVSGARRLHNPHWTGLGMCF*AFCHTG
Trigger: CCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAA...CCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCCCGGCAGTGGAGGACTaGAAAAGAGGAGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: GGCIIHTGRGGTGVLLRTPAVED*KRGADG
Trigger: CCCGTCGGCTCCTCTTTTCCAGTCCTCCACTGCCGG...GGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR GCA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTGTAGCCCCTGACAGCTaGCCTTTACCTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TISGKDRGCSDCEAGKQAVAPDS*PLPLRL
Trigger: CAGCCGGAGAGGTAAAGGGCAGCTGTCAGGGGCTAC...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp CACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGAGGTTGCTCTGACTaGGAGGCTGGCAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HGGPYLGRTEVALTARLARGCSD*EAGKQA
Trigger: AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCT...TGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp TCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGTGGACGGGGAGGAACTaGAGTTCTTCTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: SVSGARRLHNPHWTGRNWWTGRN*SSSQDH
Trigger: ATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCA...CCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp ACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGTTGGGAATGTGCTTCTaGGCCTTCTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: TGLQSSVSGARRLHNPHWLGMCF*AFCHTG
Trigger: CCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAA...CCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGAAACCGGTGGGAATTTaGGAATGTGCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLGLLPYRAPELSFRGPEKPVGI*ECASGP
Trigger: AGGCCCAGAAGCACATTCCCAAATTCCCACCGGTTT...CTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp TGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAAACCGGTGGGAATTTaGGAATGTGCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CFWAFCHTGLQSSVSGARKPVGI*ECASGP
Trigger: AGGCCCAGAAGCACATTCCCAAATTCCCACCGGTTT...CCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGAAACCGGTGGGAATTTaGGAATGTGCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLQSSVSGARRLHNPHWTKPVGI*ECASGP
Trigger: AGGCCCAGAAGCACATTCCCAAATTCCCACCGGTTT...CGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp AATAGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCCGGCAGTGGAGGACTaGAAAAGAGGAGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: NRHGGPYLGRTEVALTARPAVED*KRGADG
Trigger: CCCGTCGGCTCCTCTTTTCCAGTCCTCCACTGCCGG...CCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp CGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACTGCTTCTGGGCCTTCTaGCATACAGGGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RRLHNPHWTGRNWSSSQDCFWAF*HTGLQS
Trigger: GCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCA...GTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TISGKDRGCSDCEAGKQASGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp CGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RRLHNPHWTGRNWSSSQDSGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...GTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp AATAGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCAGCAGGGAAACCGTTaGCAGGCCGTTGCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: NRHGGPYLGRTEVALTARQQGNR*QAVAKG
Trigger: GCCCTTAGCAACGGCCTGGCAACGGTTTCCCTGCTG...CCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR CCA 90 bp TCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: SAIQGSRAQFPGPGGCIIGTHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACC...GATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp TCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCTTGGGAATGTGCTTCTaGGCCTTCTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: SAIQGSRAQFPGPGGCIILGMCF*AFCHTG
Trigger: CCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAA...GATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR TCA 90 bp GCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGGAGAGTGCTTAGTCTaGGAGAAGAGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: ARRLHNPHWTGRNWSSSQGECLV*EKRSQC
Trigger: GCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCC...CTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR TCA 90 bp GGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCCAGCCATGTGATTCTTaGCCAGCTGGAGAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GPGGCIIHTGRGGTGVLLQPCDS*PAGECL
Trigger: TAAGCACTCTCCAGCTGGTCAAGAATCACATGGCTG...GAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR TCA 90 bp GTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTGGCGGCGGTAGCCCCTaGCAGCTGCCCTTTACCTCT +
Preference number: 4 (lower is better)
Translates to: VLTLTGTEQSTAALAERIGGGSP*QLPFTS
Trigger: AGAGGTAAAGGGCAGCTGTCAGGGGCTACCGCCGCC...AATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557724.5
CDS-3UTR GCA 90 bp GGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGAGGAGCCGACGGGGGCTaGAGCAGCAGGGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: GRGGTGVLLRTICDDFTGGADGG*SSRETV
Trigger: AACGGTTTCCCTGCTGCTGCAGCCCCCGTCGGCTCC...TCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR GCA 90 bp TTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCTGCTGTAGCAGCTGGGGAGCCGACGGGGGCTaGAGCAGCAGGGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: LNQGSFLAKVELGCCSSWGADGG*SSRETV
Trigger: AACGGTTTCCCTGCTGCTGCAGCCCCCGTCGGCTCC...CCAGCTGCTACAGCAGCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR CCA 90 bp CACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAACGGTGGACCATATCTaGGAAGGACAGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: HGGPYLGRTEVALTARLATVDHI*EGQRLL
Trigger: GAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGT...TGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp AGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: RHGGPYLGRTEVALTARLGTHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACC...CAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp TTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: FCHTGLQSSVSGARRLHNGTHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACC...ATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp GCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGTGGACGGGGAGGAACTaGAGTTCTTCTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: ARRLHNPHWTGRNWSSSQWTGRN*SSSQDH
Trigger: ATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCA...CTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp ATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTCTGCATAATCCACACTaGACGGGGAGGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: IQGSRAQFPGPGGCIIHTLHNPH*TGRNWS
Trigger: ACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG...AGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GGCAGGTATGCCTTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCTGCCCGGCAGTGGAGGACTaGAAAAGAGGAGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: GRYALNQGSFLAKVELGCPAVED*KRGADG
Trigger: CCCGTCGGCTCCTCTTTTCCAGTCCTCCACTGCCGG...GCAGCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAAGGCATACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR TCA 90 bp TGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGAGGACAGAGGTTGCTCTaGCTCTCCGGCTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: WYSRLLEPSSLLQLWLKGGQRLL*LSGCHP
Trigger: TGGATGGCAGCCGGAGAGTCAGAGCAACCTCTGTCC...TCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR TCA 90 bp TTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCAGCCATGTGATTCTTaGCCAGCTGGAGAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: FCHTGLQSSVSGARRLHNQPCDS*PAGECL
Trigger: TAAGCACTCTCCAGCTGGTCAAGAATCACATGGCTG...ATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR GCA 90 bp CTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGGGGAAGGACAGAGGTTaGTCTGACTCTCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LHNPHWTGRNWSSSQDHLGKDRG*SDSPAA
Trigger: GGCAGCCGGAGAGTCAGAGCAACCTCTGTCCTTCCC...CAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GCCTTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCTGCTGTAGCAGCGGGAAGGACAGAGGTTaGTCTGACTCTCCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALNQGSFLAKVELGCCSSGKDRG*SDSPAA
Trigger: GGCAGCCGGAGAGTCAGAGCAACCTCTGTCCTTCCC...GCTGCTACAGCAGCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR GCA 90 bp AGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAAACCGAGCAGTCTACTaGAGCATTACTTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RAQFPGPGGCIIHTGRGGNRAVY*SITFGA
Trigger: AGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTT...TCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000556870.5
CDS-3UTR GCA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTCTTTACCTCTCCGGCTaGCATCCATGCTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TISGKDRGCSDCEAGKQALYLSG*HPCLVL
Trigger: GAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAG...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp TCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTTTATGGCCTTGCACTCAGCTaGCCGGACCCGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SRLLEPSSLLQLWLKGFYGLALS*PDPRLG
Trigger: TCCCAGCCTCGGGTCCGGGCAGCTGAGTGCAAGGCC...ATAAAATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557724.5
CDS-3UTR GCA 90 bp GCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTCTCTCCCTCTTCCTTTaGGCAGGCCTGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGTHAYWNRAVYCSITFGLSLFL*AGLGSS
Trigger: GGAGCTGCCCAGGCCTGCGCAAAGGAAGAGGGAGAG...ACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR CCA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: TISGKDRGCSDCEAGKQAGTHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACC...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp GGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCTTGGGAATGTGCTTCTaGGCCTTCTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: GGCIIHTGRGGTGVLLRTLGMCF*AFCHTG
Trigger: CCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAA...GGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GTCTGCATACTTTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCGCCCAGCCCCGGCAGTaGAGGACTGGAAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VCILYAGTHAYWNRAVYCAQPRQ*RTGKEE
Trigger: CTCCTCTTTTCCAGTCCTCCACTGCCGGGGCTGGGC...GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR TCA 90 bp TGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGGACAGAGGTTGCTCTaGCTCTCCGGCTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: CIIHTGRGGTGVLLRTICGQRLL*LSGCHP
Trigger: TGGATGGCAGCCGGAGAGTCAGAGCAACCTCTGTCC...ACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR TCA 90 bp AATAGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGGGAGAGTGCTTAGTCTaGGAGAAGAGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: NRHGGPYLGRTEVALTARGECLV*EKRSQC
Trigger: GCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCC...CCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557724.5
CDS-3UTR GCA 90 bp TTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGGAGAAGAGGAGTCAGTaGAAAAAGCATTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: FWAFCHTGLQSSVSGARREKRSQ*KKHYFW
Trigger: CCAAAAGTAATGCTTTTTGCACTGACTCCTCTTCTC...CCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGAGAAGAGGAGTCAGTaGAAAAAGCATTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: GLQSSVSGARRLHNPHWTEKRSQ*KKHYFW
Trigger: CCAAAAGTAATGCTTTTTGCACTGACTCCTCTTCTC...CGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCAACCGAGCAGTCTACTaGAGCATTACTTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SAIQGSRAQFPGPGGCIINRAVY*SITFGA
Trigger: AGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTT...GATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000556870.5
CDS-3UTR GCA 90 bp GCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTGGGAAGGACAGAGGTTaGTCTGACTGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGTHAYWNRAVYCSITFGGKDRG*SDCEAG
Trigger: GCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCC...ACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR GCA 90 bp GCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACCTTCTAGACACTTTATaGTGGTACTCACGCTTACTG +
Preference number: 4 (lower is better)
Translates to: AIQGSRAQFPGPGGCIIHLLDTL*WYSRLL
Trigger: CAGTAAGCGTGAGTACCAGCATAAAGTGTCTAGAAG...GTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp AATAGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: NRHGGPYLGRTEVALTARGTHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACC...CCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp CGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACAAACCGGTGGGAATTTaGGAATGTGCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RRLHNPHWTGRNWSSSQDKPVGI*ECASGP
Trigger: AGGCCCAGAAGCACATTCCCAAATTCCCACCGGTTT...GTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGATTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 4 (lower is better)
Translates to: QGSRAQFPGPGGCIIHTGFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...TCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp TTACTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTGGACCATATCTGGGAGGCGGCGGTAGCCCCTaGCAGCTGCCCTTTACCTCT +
Preference number: 4 (lower is better)
Translates to: LLLVLKCPLNRHGGPYLGGGGSP*QLPFTS
Trigger: AGAGGTAAAGGGCAGCTGTCAGGGGCTACCGCCGCC...TCCCAGATATGGTCCACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR GCA 90 bp AGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAGAGAAGAGGAGTCAGTaGAAAAAGCATTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: RAQFPGPGGCIIHTGRGGEKRSQ*KKHYFW
Trigger: CCAAAAGTAATGCTTTTTGCACTGACTCCTCTTCTC...TCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GGCIIHTGRGGTGVLLRTMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...GGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGCCGGGGCCCGGAGGCTaGATAATCCACACTGGACGG +
Preference number: 4 (lower is better)
Translates to: YVDLGVVSLKRVLVTLQRPGPGG*IIHTGR
Trigger: CCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGG...CCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CWYSRLLEPSSLLQHYFWSGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...CCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR GCA 90 bp GTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VLTLTGTEQSTAALAERISGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...AATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555715.5
ENST00000557724.5
CDS-3UTR GCA 90 bp CTTCGTTGTTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTGGAACCGAGGTAGCCCCTGACAGCTaGCCTTTACCTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LRCWSAYFMLVLTLTGTEVAPDS*PLPLRL
Trigger: CAGCCGGAGAGGTAAAGGGCAGCTGTCAGGGGCTAC...CTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAACAACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR GCA 90 bp GTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTGCTCAGAGGTTGCTCTGACTaGGAGGCTGGCAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VLTLTGTEQSTAALLLVLRGCSD*EAGKQA
Trigger: AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCT...GAGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR GCA 90 bp TGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGAAAAGTAGAGCTGGGCTaGTGTAGCAGCTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WYSRLLEPSSLLQLWLKGKVELG*CSSWEQ
Trigger: CTGCTCCCAGCTGCTACAGCAGCCCAGCTCTACTTT...TCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR CCA 90 bp TTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTCCGGCAGTGGAGGACTaGAAAAGAGGAGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: LCWYSRLLEPSSLLQHYFPAVED*KRGADG
Trigger: CCCGTCGGCTCCTCTTTTCCAGTCCTCCACTGCCGG...AAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR CCA 90 bp CTAAATACACTTTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCGCCCAGCCCCGGCAGTaGAGGACTGGAAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LNTLYAGTHAYWNRAVYCAQPRQ*RTGKEE
Trigger: CTCCTCTTTTCCAGTCCTCCACTGCCGGGGCTGGGC...GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CCA 90 bp TCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTTTATGCCCAGCCCCGGCAGTaGAGGACTGGAAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRLLEPSSLLQLWLKGFYAQPRQ*RTGKEE
Trigger: CTCCTCTTTTCCAGTCCTCCACTGCCGGGGCTGGGC...ATAAAATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555715.5
ENST00000557724.5
CDS-3UTR CCA 90 bp CTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGAAATACACTTTATGCTaGTACTCACGCTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LLGLLPYRAPELSFRGPEKYTLC*YSRLLE
Trigger: TTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTT...CTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CCA 90 bp GCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGATTTGCACCCAACACTaGAGCACCCAGATTCATACA +
Preference number: 4 (lower is better)
Translates to: ARRLHNPHWTGRNWSSSQICTQH*STQIHT
Trigger: TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAAT...CTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp CTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGGGAGAGTGCTTAGTCTaGGAGAAGAGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LHNPHWTGRNWSSSQDHLGECLV*EKRSQC
Trigger: GCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCC...CAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR TCA 90 bp GCCTTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCTGCTGTAGCAGCGGAGAGTGCTTAGTCTaGGAGAAGAGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: ALNQGSFLAKVELGCCSSGECLV*EKRSQC
Trigger: GCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCC...GCTGCTACAGCAGCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR GCA 90 bp CATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACGCTAAATACACTTTATaGTGGTACTCACGCTTACTG +
Preference number: 4 (lower is better)
Translates to: HTGLQSSVSGARRLHNPHAKYTL*WYSRLL
Trigger: CAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGC...GTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp AGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGATCTTCGTTGTTGGTCTaGATCTATCCTAGGTATATT +
Preference number: 4 (lower is better)
Translates to: RAQFPGPGGCIIHTGRGGSSLLV*IYPRYI
Trigger: AATATACCTAGGATAGATGCAGACCAACAACGAAGA...TCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR GCA 90 bp GCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACTCTTCGTTGTTGGTCTaGATCTATCCTAGGTATATT +
Preference number: 4 (lower is better)
Translates to: AIQGSRAQFPGPGGCIIHSSLLV*IYPRYI
Trigger: AATATACCTAGGATAGATGCAGACCAACAACGAAGA...GTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp GCCTTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCTGCTGTAGCAGCGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: ALNQGSFLAKVELGCCSSGTHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACC...GCTGCTACAGCAGCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR CCA 90 bp TCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTGGACGGGGAGGAACTaGAGTTCTTCTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: STLDGEELEFFSGPFVMTWTGRN*SSSQDH
Trigger: ATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCA...AGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTAGCCCAGCCCCGGCAGTaGAGGACTGGAAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GEELEFFSGPFVMTLLDLAQPRQ*RTGKEE
Trigger: CTCCTCTTTTCCAGTCCTCCACTGCCGGGGCTGGGC...TAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp CCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAAAATACACTTTATGCTaGTACTCACGCTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: PSAIQGSRAQFPGPGGCIKYTLC*YSRLLE
Trigger: TTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTT...TATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CCA 90 bp ACCAGCTGGAGAGTGCTTAGTCTGAGAGAAGAGGAGTCAGTGCAAAAAGCATTTGGCTGCTGTAGCAGCTaGGAGCAGGAGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSWRVLSLREEESVQKAFGCCSS*EQETAK
Trigger: CTTGGCTGTCTCCTGCTCCCAGCTGCTACAGCAGCC...AAATGCTTTTTGCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCCAGCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR CCA 90 bp TTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCTAGACACTTTATGCTaGTACTCACGCTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: FCHTGLQSSVSGARRLHNLDTLC*YSRLLE
Trigger: TTCCAGTAAGCGTGAGTACCAGCATAAAGTGTCTAG...ATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR GCA 90 bp AGACCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTCCGGGGCCCGGAGGCTaGATAATCCACACTGGACGG +
Preference number: 4 (lower is better)
Translates to: RPKFLGCSKSSVKRQVYSPGPGG*IIHTGR
Trigger: CCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGG...ACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp GCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTCTTTACCTCTCCGGCTaGCATCCATGCTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGTHAYWNRAVYCSITFGLYLSG*HPCLVL
Trigger: GAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAG...ACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR GCA 90 bp TCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTTTATAGAGGTTGCTCTGACTaGGAGGCTGGCAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRLLEPSSLLQLWLKGFYRGCSD*EAGKQA
Trigger: AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCT...ATAAAATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557724.5
CDS-3UTR GCA 90 bp GTTGGTCTGCATCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGGGGAAGGACAGAGGTTaGTCTGACTGCGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGLHQNFWDAAKAVLRGKGKDRG*SDCEAG
Trigger: GCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCC...CTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGATGCAGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR GCA 90 bp GCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGCCAAAATTTCTGGGATaGAGCAAAAGCAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: ARRLHNPHWTGRNWSSSQPKFLG*SKSSVK
Trigger: CTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGG...CTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp GGAATGTGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGCCAAAATTTCTGGGATaGAGCAAAAGCAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: GMCFWAFCHTGLQSSVSGPKFLG*SKSSVK
Trigger: CTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGG...CCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCACATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CCA 90 bp AGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAAGTCTACTGCAGCTTTaGCTGAAAGGATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: RAQFPGPGGCIIHTGRGGSLLQL*LKGFYY
Trigger: ATAATAAAATCCTTTCAGCCAAAGCTGCAGTAGACT...TCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGCTGCATAATCCACACTaGACGGGGAGGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: LDGEELEFFSGPFVMTLLLHNPH*TGRNWS
Trigger: ACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG...CAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCCCAGCCCCGGCAGTaGAGGACTGGAAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LDLCRLRCSLSEEGTSDLAQPRQ*RTGKEE
Trigger: CTCCTCTTTTCCAGTCCTCCACTGCCGGGGCTGGGC...AAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp CAAGGCAGGTATGCCTTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCCAGCCATGTGATTCTTaGCCAGCTGGAGAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: QGRYALNQGSFLAKVELGQPCDS*PAGECL
Trigger: TAAGCACTCTCCAGCTGGTCAAGAATCACATGGCTG...GCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAAGGCATACCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR TCA 90 bp GTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTCAGCCATGTGATTCTTaGCCAGCTGGAGAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: VLTLTGTEQSTAALAERIQPCDS*PAGECL
Trigger: TAAGCACTCTCCAGCTGGTCAAGAATCACATGGCTG...AATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555715.5
ENST00000557724.5
CDS-3UTR TCA 90 bp GGAATGTGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGATAATAGCGATACTGTaGCAGGAAAGATTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: GMCFWAFCHTGLQSSVSGIIAIL*QERFCF
Trigger: GAAGCAAAATCTTTCCTGTCACAGTATCGCTATTAT...CCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555515.5
CDS-3UTR GCA 90 bp TGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGAGAAGAGGAGTCAGTaGAAAAAGCATTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: WTISGKDRGCSDCEAGKQEKRSQ*KKHYFW
Trigger: CCAAAAGTAATGCTTTTTGCACTGACTCCTCTTCTC...CTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557724.5
CDS-3UTR GCA 90 bp CTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LHNPHWTGRNWSSSQDHLMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...CAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TGCATCTATCCTAGGTATATTTGCACCCAACACTGGAGCACCCAGATTCATACATGCTTCTGGGCCTTCTaGCATACAGGGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: CIYPRYICTQHWSTQIHTCFWAF*HTGLQS
Trigger: GCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCA...TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATAGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp GGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTATCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GEELEFFSGPFVMTLLDLSGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...TAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTGGACCATATCTGGGAAGGACGGTGGACCATATCTaGGAAGGACAGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLVLKCPLNRHGGPYLGRTVDHI*EGQRLL
Trigger: GAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGT...CCTTCCCAGATATGGTCCACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CCA 90 bp ACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGCATAATCCACACTaGACGGGGAGGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: TLDGEELEFFSGPFVMTLLHNPH*TGRNWS
Trigger: ACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG...TAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR TCA 90 bp ATTTGGGAATGTGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTTTCGAAATGACTAACTaGAACCGGTGGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: IWECASGPSAIQGSRAQFFEMTN*NRWEFG
Trigger: CCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAA...AAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR GCA 90 bp CTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTTGCTTCTGGGCCTTCTaGCATACAGGGCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LDLCRLRCSLSEEGTSDLCFWAF*HTGLQS
Trigger: GCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCA...AAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp CTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LDLCRLRCSLSEEGTSDLSGCHP*LVLLQP
Trigger: CGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGA...AAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTATCCTAGGTATATTTaGACCCAACACTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: STLDGEELEFFSGPFVMTYPRYI*TQHWST
Trigger: GGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATA...AGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp TCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCCCGGCAGTGGAGGACTaGAAAAGAGGAGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: SGPFVMTLLDLCRLRCSLPAVED*KRGADG
Trigger: CCCGTCGGCTCCTCTTTTCCAGTCCTCCACTGCCGG...GAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp TGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGTTCTCTCTTCGTTGTTaGTCTGCATCAAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: WTISGKDRGCSDCEAGKQFSLRC*SASKFL
Trigger: CAGAAATTTTGATGCAGACCAACAACGAAGAGAGAA...CTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CCA 90 bp TCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTATTTGCACCCAACACTaGAGCACCCAGATTCATACA +
Preference number: 4 (lower is better)
Translates to: STLDGEELEFFSGPFVMTICTQH*STQIHT
Trigger: TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAAT...AGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp GGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTAACGGTGGACCATATCTaGGAAGGACAGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GEELEFFSGPFVMTLLDLTVDHI*EGQRLL
Trigger: GAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGT...TAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTATGGACGGGGAGGAACTaGAGTTCTTCTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: GEELEFFSGPFVMTLLDLWTGRN*SSSQDH
Trigger: ATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCA...TAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp TGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGATTGGACGGGGAGGAACTaGAGTTCTTCTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: CRLRCSLSEEGTSDLAKDWTGRN*SSSQDH
Trigger: ATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCA...ATCCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGCTAGACACTTTATGCTaGTACTCACGCTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LHNPHWTGRNWSSSQDHLLDTLC*YSRLLE
Trigger: TTCCAGTAAGCGTGAGTACCAGCATAAAGTGTCTAG...CAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp TATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGTGGGTGCTTTCGAAATaGCTAACTGAAACCGGTGGG +
Preference number: 4 (lower is better)
Translates to: YVDLGVVSLKRVLVTLQRWVLSK*LTETGG
Trigger: CCCACCGGTTTCAGTTAGTCATTTCGAAAGCACCCA...CCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
CDS-3UTR GCA 90 bp CTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTGGACCATATCTGGGAAGGAACCGAGCAGTCTACTaGAGCATTACTTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLVLKCPLNRHGGPYLGRNRAVY*SITFGA
Trigger: AGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTT...CCTTCCCAGATATGGTCCACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR CCA 90 bp TGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTTTCTCTCTTCGTTGTTaGTCTGCATGCTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: CIIHTGRGGTGVLLRTICFSLRC*SACLLE
Trigger: TTCCAGTAAGCATGCAGACCAACAACGAAGAGAGAA...ACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557248.5
3UTR CAA 72 bp CCCAGGTCTCTGTCAGTGGAATCGAATGGGATTATATaGCCACACAGGGACCATTACAGAATACCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PRSLSVESNGII*PHRDHYRIPVK
Trigger: CTTGACAGGTATTCTGTAATGGTCCCTGTGTGGCAATATAATCCCATTCGATTCCACTGACAGAGACCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR TCA 90 bp CTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGATGAAAATCCATTCATTTCTGGAGAGTGCTTAGTCTaGGAGAAGAGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSEEGTSDLAKDENPFISGECLV*EKRSQC
Trigger: GCACTGACTCCTCTTCTCTCAGACTAAGCACTCTCC...AGAAATGAATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR TCA 90 bp CTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTCAGCCATGTGATTCTTaGCCAGCTGGAGAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LDLCRLRCSLSEEGTSDLQPCDS*PAGECL
Trigger: TAAGCACTCTCCAGCTGGTCAAGAATCACATGGCTG...AAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTGGTCTGCATACTTTATaGTGGTACTCACGCTTACTG +
Preference number: 4 (lower is better)
Translates to: LCWYSRLLEPSSLLQHYFGLHTL*WYSRLL
Trigger: CAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACC...AAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR GCA 90 bp TGCATCTATCCTAGGTATATTTGCACCCAACACTGGAGCACCCAGATTCATACAATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CIYPRYICTQHWSTQIHTMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATAGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTCTACTTTCAGGACATaGAGCAGGTGGCGCATTTTT +
Preference number: 4 (lower is better)
Translates to: GMGTGNCNYSNGDSRRGRSTFRT*SRWRIF
Trigger: AAAAATGCGCCACCTGCTGCATGTCCTGAAAGTAGA...CCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR GCA 90 bp TCTGCATCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACCTTTACCTCTCCGGCTaGCATCCATGCTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SASKFLGCSKSSVKRQVYLYLSG*HPCLVL
Trigger: GAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAG...GTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGATGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CCA 90 bp AGACCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: RPKFLGCSKSSVKRQVYSGTHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACC...ACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CCA 90 bp CTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGATGAAAATCCATTCATTTCTCTGCATAATCCACACTaGACGGGGAGGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSEEGTSDLAKDENPFISLHNPH*TGRNWS
Trigger: ACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAG...AGAAATGAATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp ACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTATTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 4 (lower is better)
Translates to: TLDGEELEFFSGPFVMTLFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...TAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR TCA 90 bp TGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGATTTCGAAATGACTAACTaGAACCGGTGGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: CRLRCSLSEEGTSDLAKDFEMTN*NRWEFG
Trigger: CCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAA...ATCCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR TCA 90 bp CAGATGGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGATTTTACGAGTTaGAGGGGGCTTCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: QMVWEQGIAIIAMVTAEEVDFTS*RGLQGI
Trigger: TATTCCCTGAAGCCCCCTTCAACTCGTAAAATCTAC...CTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACCATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR GCA 90 bp ACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTAGCTAAATACACTTTATaGTGGTACTCACGCTTACTG +
Preference number: 4 (lower is better)
Translates to: TLDGEELEFFSGPFVMTLAKYTL*WYSRLL
Trigger: CAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGC...TAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp GGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTATATCCTAGGTATATTTaGACCCAACACTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: GEELEFFSGPFVMTLLDLYPRYI*TQHWST
Trigger: GGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATA...TAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR GCA 90 bp GGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATCTTCGTTGTTGGTCTaGATCTATCCTAGGTATATT +
Preference number: 4 (lower is better)
Translates to: GRGGTGVLLRTICDDFTGSSLLV*IYPRYI
Trigger: AATATACCTAGGATAGATGCAGACCAACAACGAAGA...TCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp ATTTGCGGTTCGCCTGAGGGCTTTTGTAAGGTATTAAAAAGTGACTTGGAATTAACGGTGGACCATATCTaGGAAGGACAGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ICGSPEGFCKVLKSDLELTVDHI*EGQRLL
Trigger: GAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGT...TAATTCCAAGTCACTTTTTAATACCTTACAAAAGCCCTCAGGCGAACCGCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp TCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTAGTCTACTGCAGCTTTaGCTGAAAGGATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: STLDGEELEFFSGPFVMTSLLQL*LKGFYY
Trigger: ATAATAAAATCCTTTCAGCCAAAGCTGCAGTAGACT...AGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GGCAGGTATGCCTTAAATCAGGGTAGTTTCCTGGCAAAAGTAGAGCTGGGCTGCAGTCTACTGCAGCTTTaGCTGAAAGGATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: GRYALNQGSFLAKVELGCSLLQL*LKGFYY
Trigger: ATAATAAAATCCTTTCAGCCAAAGCTGCAGTAGACT...GCAGCCCAGCTCTACTTTTGCCAGGAAACTACCCTGATTTAAGGCATACCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR CCA 90 bp CTTCGTTGTTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTGGAACCGAGTTCTCTCTTCGTTGTTaGTCTGCATACTTTATGCTG +
Preference number: 4 (lower is better)
Translates to: LRCWSAYFMLVLTLTGTEFSLRC*SAYFML
Trigger: CAGCATAAAGTATGCAGACCAACAACGAAGAGAGAA...CTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAACAACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR CCA 90 bp GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGACCTGTCAAGATTTTTaGCAGATGGTATGGGAACAG +
Preference number: 4 (lower is better)
Translates to: GMGTGNCNYSNGDSRRGRTCQDF*QMVWEQ
Trigger: CTGTTCCCATACCATCTGCCAAAAATCTTGACAGGT...CCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR CCA 90 bp GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGGTCAGTGGAATCGAATaGGATTATATTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: GMGTGNCNYSNGDSRRGRVSGIE*DYIATQ
Trigger: CTGTGTGGCAATATAATCCCATTCGATTCCACTGAC...CCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR TCA 90 bp TGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGTTCGAAATGACTAACTaGAACCGGTGGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: WIYVDLGVVSLKRVLVTLFEMTN*NRWEFG
Trigger: CCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAA...CAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR TCA 90 bp ACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTTGGGTGCTTTCGAAATaGCTAACTGAAACCGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLLDLCRLRCSLSEEGTSWVLSK*LTETGG
Trigger: CCCACCGGTTTCAGTTAGTCATTTCGAAAGCACCCA...ACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTACTTCTAGACACTTTATaGTGGTACTCACGCTTACTG +
Preference number: 4 (lower is better)
Translates to: GEELEFFSGPFVMTLLDLLLDTL*WYSRLL
Trigger: CAGTAAGCGTGAGTACCAGCATAAAGTGTCTAGAAG...TAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp TTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGACGGTGGACCATATCTaGGAAGGACAGAGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FVMTLLDLCRLRCSLSEETVDHI*EGQRLL
Trigger: GAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGT...CTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CAGTCTACTGCAGCATTACTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTCTGCATACTTTATGCTaGTACTCACGCTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: QSTAALLLVLKCPLNRHGLHTLC*YSRLLE
Trigger: TTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAG...ACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGTAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR CCA 90 bp TTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGTTGGGAATGTGCTTCTaGGCCTTCTGCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: FVMTLLDLCRLRCSLSEELGMCF*AFCHTG
Trigger: CCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAA...CTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp GATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAATTTGCACCCAACACTaGAGCACCCAGATTCATACA +
Preference number: 4 (lower is better)
Translates to: DLCRLRCSLSEEGTSDLAICTQH*STQIHT
Trigger: TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAAT...TGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp CTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTATTTGCACCCAACACTaGAGCACCCAGATTCATACA +
Preference number: 4 (lower is better)
Translates to: LDLCRLRCSLSEEGTSDLICTQH*STQIHT
Trigger: TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAAT...AAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp TGCATCTATCCTAGGTATATTTGCACCCAACACTGGAGCACCCAGATTCATACACTAGACCAAAATTTCTaGGATGCAGCAAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: CIYPRYICTQHWSTQIHTLDQNF*DAAKAV
Trigger: CACTGCTTTTGCTGCATCCCAGAAATTTTGGTCTAG...TGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATAGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp GGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTACTTAAGTTTTCCTCCGATGTaGAGCCTAAGTCTACTTTCA +
Preference number: 4 (lower is better)
Translates to: GTGNCNYSNGDSRRGRYLSFPPM*SLSLLS
Trigger: TGAAAGTAGACTTAGGCTGCACATCGGAGGAAAACT...TAAGTACCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR GCA 90 bp GTTGGTCTGCATCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGGCTAAATACACTTTATaGTGGTACTCACGCTTACTG +
Preference number: 4 (lower is better)
Translates to: VGLHQNFWDAAKAVLRGKAKYTL*WYSRLL
Trigger: CAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGC...CTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGATGCAGACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR GCA 90 bp TTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTCAAAATTTCTGGGATaGAGCAAAAGCAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: LCWYSRLLEPSSLLQHYFSKFLG*SKSSVK
Trigger: CTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGA...AAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR GCA 90 bp TCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGATTTTATGAGAAGAGGAGTCAGTaGAAAAAGCATTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: SRLLEPSSLLQLWLKGFYEKRSQ*KKHFNK
Trigger: CTTGTTAAAATGCTTTTTGCACTGACTCCTCTTCTC...ATAAAATCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR CCA 90 bp CTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTGGACCATATCTGGGAAGGAGTCTACTGCAGCTTTaGCTGAAAGGATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: LLVLKCPLNRHGGPYLGRSLLQL*LKGFYY
Trigger: ATAATAAAATCCTTTCAGCCAAAGCTGCAGTAGACT...CCTTCCCAGATATGGTCCACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557724.5
CDS-3UTR CCA 90 bp TTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGAAACCGGTGGGAATTTaGGAATGTGCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FVMTLLDLCRLRCSLSEEKPVGI*ECASGP
Trigger: AGGCCCAGAAGCACATTCCCAAATTCCCACCGGTTT...CTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CCA 90 bp CAGATGGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGAAGATTTTTGGCAGATaGTATGGGAACAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: QMVWEQGIAIIAMVTAEEKIFGR*YGNREL
Trigger: CAATTCCCTGTTCCCATACCATCTGCCAAAAATCTT...CTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACCATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR CCA 90 bp TCTGTTTTTAAAGTGCGAGGAGTGAATGGCAATTGTTTGTTAGAAAAGAGTTCAGGTCTGCATGCTTACTaGAACCGAGCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: SVFKVRGVNGNCLLEKSSGLHAY*NRAVYC
Trigger: GCAGTAGACTGCTCGGTTCCAGTAAGCATGCAGACC...TGAACTCTTTTCTAACAAACAATTGCCATTCACTCCTCGCACTTTAAAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557248.5
CDS-3UTR CCA 90 bp AGCTCTTCATGTGGCCACCTCTATAGTAGAACATATGCTATTTGTTGTGTCCACTTATTCATCTTCCAGTaGGGTTGTTTTCGGACCAGT +
Preference number: 4 (lower is better)
Translates to: SSSCGHLYSRTYAICCVHLFIFQ*GCFRTS
Trigger: ACTGGTCCGAAAACAACCCCACTGGAAGATGAATAA...GTGGACACAACAAATAGCATATGTTCTACTATAGAGGTGGCCACATGAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554802.1
CDS-3UTR GCA 90 bp TTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FFSGPFVMTLLDLCRLRCMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...ACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR GCA 90 bp TTGCAGAGCTCTTCATGTGGCCACCTCTATAGTAGAACATATGCTATTTGTTGTAGTTTTCCTCCGATGTaGAGCCTAAGTCTACTTTCA +
Preference number: 4 (lower is better)
Translates to: LQSSSCGHLYSRTYAICCSFPPM*SLSLLS
Trigger: TGAAAGTAGACTTAGGCTGCACATCGGAGGAAAACT...ACAACAAATAGCATATGTTCTACTATAGAGGTGGCCACATGAAGAGCTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554802.1
CDS-3UTR GCA 90 bp ATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTTATCCTAGGTATATTTaGACCCAACACTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: MTLLDLCRLRCSLSEEGTYPRYI*TQHWST
Trigger: GGTGCTCCAGTGTTGGGTGCAAATATACCTAGGATA...AGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp GTTGGTCTGCATCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGAAATACACTTTATGCTaGTACTCACGCTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: VGLHQNFWDAAKAVLRGKKYTLC*YSRLLE
Trigger: TTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTT...CTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGATGCAGACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CCA 90 bp CAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTGCTACTGCATCAAAATTTCTaGGATGCAGCAAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: QNFWDAAKAVLRGKFTVLLHQNF*DAAKAV
Trigger: CACTGCTTTTGCTGCATCCCAGAAATTTTGATGCAG...TAGCACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CCA 90 bp GGTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTTAATGTTAATCATCTaGAATCCTGACCGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GMGTGNCNYSNGDSRRGRLMLII*NPDRVF
Trigger: GAAAACTCGGTCAGGATTCCAGATGATTAACATTAA...CCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR CCA 90 bp GGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTACTTATTTTGGCAGATGGTATaGGAACAGGGAATTGCAATT +
Preference number: 4 (lower is better)
Translates to: GTGNCNYSNGDSRRGRYLFWQMV*EQGIAI
Trigger: AATTGCAATTCCCTGTTCCCATACCATCTGCCAAAA...TAAGTACCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR TCA 90 bp TTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGTTCGAAATGACTAACTaGAACCGGTGGGAATTTGGG +
Preference number: 4 (lower is better)
Translates to: FVMTLLDLCRLRCSLSEEFEMTN*NRWEFG
Trigger: CCCAAATTCCCACCGGTTTCAGTTAGTCATTTCGAA...CTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR GCA 90 bp GTTTTTAAAGTGCGAGGAGTGAATGGCAATTGTTTGTTAGAAAAGAGTTCAGAAATGTCATCCTCAATTTaGGGTTCGCCTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VFKVRGVNGNCLLEKSSEMSSSI*GSPEGF
Trigger: AAAGCCCTCAGGCGAACCGCAAATTGAGGATGACAT...TTCTGAACTCTTTTCTAACAAACAATTGCCATTCACTCCTCGCACTTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
CDS-3UTR GCA 90 bp ATACACTTGAATAAAGATTTGCTATCAATTTCACAGTGGGCTTGCAGAGCTCTTTCTACTTTCAGGACATaGAGCAGGTGGCGCATTTTT +
Preference number: 4 (lower is better)
Translates to: IHLNKDLLSISQWACRALSTFRT*SRWRIF
Trigger: AAAAATGCGCCACCTGCTGCATGTCCTGAAAGTAGA...AAGAGCTCTGCAAGCCCACTGTGAAATTGATAGCAAATCTTTATTCAAGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554802.1
CDS-3UTR GCA 90 bp GATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTGCTAAATACACTTTATAACCGAGCAGTCTACTaGAGCATTACTTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: DAAKAVLRGKFTVLNTLYNRAVY*SITFGA
Trigger: AGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTT...ATAAAGTGTATTTAGCACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CCA 90 bp TGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGATAGTCTACTGCAGCTTTaGCTGAAAGGATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: CRLRCSLSEEGTSDLAKDSLLQL*LKGFYY
Trigger: ATAATAAAATCCTTTCAGCCAAAGCTGCAGTAGACT...ATCCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR CCA 90 bp AGGTATATTTGCACCCAACACTGGAGCACCCAGATTCATACAAGTACTTCTAGAAGTGCGAGGAGTGAATaGCAATTGTTTGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: RYICTQHWSTQIHTSTSRSARSE*QLFVRK
Trigger: TTTTCTAACAAACAATTGCCATTCACTCCTCGCACT...TCTAGAAGTACTTGTATGAATCTGGGTGCTCCAGTGTTGGGTGCAAATATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555515.5
CDS-3UTR CCA 90 bp TTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTTTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 4 (lower is better)
Translates to: FFSGPFVMTLLDLCRLRCFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...ACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp TTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGTTCTCTCTTCGTTGTTaGTCTGCATCTATCCTAGGT +
Preference number: 4 (lower is better)
Translates to: FVMTLLDLCRLRCSLSEEFSLRC*SASILG
Trigger: ACCTAGGATAGATGCAGACCAACAACGAAGAGAGAA...CTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp ATACACTTGAATAAAGATTTGCTATCAATTTCACAGTGGGCTTGCAGAGCTCTTCTATCAATTTCACAGTaGGCTTGCAGAGCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: IHLNKDLLSISQWACRALLSISQ*ACRALH
Trigger: ATGAAGAGCTCTGCAAGCCCACTGTGAAATTGATAG...AAGAGCTCTGCAAGCCCACTGTGAAATTGATAGCAAATCTTTATTCAAGTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554802.1
CDS-3UTR CCA 90 bp TTCTCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTAGACCAAAATTTCTaGGATGCAGCAAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSGPFVMTLLDLCRLRCSLDQNF*DAAKAV
Trigger: CACTGCTTTTGCTGCATCCCAGAAATTTTGGTCTAG...ACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR GCA 90 bp TCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTTCGTTGTTGGTCTaGATCTATCCTAGGTATATT +
Preference number: 4 (lower is better)
Translates to: SGPFVMTLLDLCRLRCSLSSLLV*IYPRYI
Trigger: AATATACCTAGGATAGATGCAGACCAACAACGAAGA...GAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CCA 90 bp ATTTGCGGTTCGCCTGAGGGCTTTTGTAAGGTATTAAAAAGTGACTTGGAATTAAGTGCGAGGAGTGAATaGCAATTGTTTGTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: ICGSPEGFCKVLKSDLELSARSE*QLFVRK
Trigger: TTTTCTAACAAACAATTGCCATTCACTCCTCGCACT...TAATTCCAAGTCACTTTTTAATACCTTACAAAAGCCCTCAGGCGAACCGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
CDS-3UTR CCA 90 bp AATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTACTTATTTCTCTTACCAGGTCTCTGTCAGTaGAATCGAATGGGATTATAT +
Preference number: 4 (lower is better)
Translates to: NCNYSNGDSRRGRYLFLLPGLCQ*NRMGLY
Trigger: ATATAATCCCATTCGATTCCACTGACAGAGACCTGG...TAAGAGAAATAAGTACCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR GCA 90 bp AATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTACTTATTTCTCTTAATGGGAACAGGGAATTaGAATTATAGCAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: NCNYSNGDSRRGRYLFLLMGTGN*NYSNGD
Trigger: GTCACCATTGCTATAATTGCAATTCCCTGTTCCCAT...TAAGAGAAATAAGTACCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS TCA 90 bp GTTGCCAGGCCGTTGCTAAGGGCTGGGTCCAGTGAGTCGCTATTGTaGCGTCACGGCGCAGGGGACGTGCGTTCCGCAGCCCCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: VARPLLRAGSSESLL*RHGAGDVRSAAPPA
Trigger: CGCAGGCGGGGCTGCGGAACGCACGTCCCCTGCGCCGTGACGTCACAATAGCGACTCACTGGACCCAGCCCTTAGCAACGGCCTGGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS GCA 90 bp GCGCCGCCTGGAGCGAGGGGCGAGGCGGCGGTAGCCCCTGACAGCTaGCCTTTACCTCTCCGGCTGCCATCCATGCTTAGTCCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: APPGARGEAAVAPDS*PLPLRLPSMLSPLA
Trigger: TGCAAGAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAGGGCAGCTGTCAGGGGCTACCGCCGCCTCGCCCCTCGCTCCAGGCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS TCA 90 bp CAGCAGGGAAACCGTTGCCAGGCCGTTGCTAAGGGCTGGGTCCAGTaGGTCGCTATTGTGACGTCACGGCGCAGGGGACGTGCGTTCCGC +
Preference number: 5 (lower is better)
Translates to: QQGNRCQAVAKGWVQ*VAIVTSRRRGRAFR
Trigger: GCGGAACGCACGTCCCCTGCGCCGTGACGTCACAATAGCGACTCACTGGACCCAGCCCTTAGCAACGGCCTGGCAACGGTTTCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS-3UTR CAA 90 bp CAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGACCGTTGCCAGGCCGTaGCTAAGGGCTGGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: QSSVSGARRLHNPHWTGRTVARP*LRAGSS
Trigger: ACTGGACCCAGCCCTTAGCAACGGCCTGGCAACGGT...CCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CAA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTCCCCAAGGGGCGGCCTaGCACTCAGCTGCCCGGACC +
Preference number: 5 (lower is better)
Translates to: TISGKDRGCSDCEAGKQAPQGAA*HSAART
Trigger: GGTCCGGGCAGCTGAGTGCAAGGCCGCCCCTTGGGG...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CAA 90 bp GGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: GPGGCIIHTGRGGTGVLLPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...GAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp CATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACACCGTTGCCAGGCCGTaGCTAAGGGCTGGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: HTGLQSSVSGARRLHNPHTVARP*LRAGSS
Trigger: ACTGGACCCAGCCCTTAGCAACGGCCTGGCAACGGT...GTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CAA 90 bp TTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: FCHTGLQSSVSGARRLHNPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...ATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp AGGCACGGTGGACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: RHGGPYLGRTEVALTARLPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...CAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGTCCACCGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS-3UTR CAA 90 bp CAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGAGAAACCGGTGGGAATTaGGGAATGTGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QGSRAQFPGPGGCIIHTGETGGN*GMCFWA
Trigger: GGCCCAGAAGCACATTCCCAAATTCCCACCGGTTTC...TCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp TGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTGGCCCCAAGGGGCGGCCTaGCACTCAGCTGCCCGGACC +
Preference number: 5 (lower is better)
Translates to: CWYSRLLEPSSLLQHYFWPQGAA*HSAART
Trigger: GGTCCGGGCAGCTGAGTGCAAGGCCGCCCCTTGGGG...CCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR CAA 90 bp CATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACGAAACCGGTGGGAATTaGGGAATGTGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HTGLQSSVSGARRLHNPHETGGN*GMCFWA
Trigger: GGCCCAGAAGCACATTCCCAAATTCCCACCGGTTTC...GTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp GGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCAGGGTACTAGTGACCTaGCAAAGGATGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: GPSAIQGSRAQFPGPGGCRVLVT*QRMKIH
Trigger: ATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCT...GCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp GGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCCAGTCTACTGCAGCTTaGGCTGAAAGGATTTTATTA +
Preference number: 5 (lower is better)
Translates to: GPSAIQGSRAQFPGPGGCQSTAA*AERILL
Trigger: TAATAAAATCCTTTCAGCCAAAGCTGCAGTAGACTG...GCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR CAA 90 bp TGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTGAAAGGACCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: WYSRLLEPSSLLQLWLKGPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...TCCTTTCAGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS-3UTR CAA 90 bp CAGTCTACTGCAGCATTACTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTCCCCAAGGGGCGGCCTaGCACTCAGCTGCCCGGACC +
Preference number: 5 (lower is better)
Translates to: QSTAALLLVLKCPLNRHGPQGAA*HSAART
Trigger: GGTCCGGGCAGCTGAGTGCAAGGCCGCCCCTTGGGG...ACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGTAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR CAA 90 bp GGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGACCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: GRGGTGVLLRTICDDFTGPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...TCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp GCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACTTTCTCTCTTCGTTGTaGGTCTGCATCTATCCTAGG +
Preference number: 5 (lower is better)
Translates to: AIQGSRAQFPGPGGCIIHFLSSL*VCIYPR
Trigger: CCTAGGATAGATGCAGACCAACAACGAAGAGAGAAA...GTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CAA 90 bp GCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACGAGTTTCTCTCTTCGTaGTTGGTCTGCATCTATCCT +
Preference number: 5 (lower is better)
Translates to: AIQGSRAQFPGPGGCIIHEFLSS*LVCIYP
Trigger: AGGATAGATGCAGACCAACAACGAAGAGAGAAACTC...GTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CAA 90 bp TGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCAAAAAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: WAFCHTGLQSSVSGARRLQKALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTTTTTG...CAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR CAA 90 bp TCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGGGTACTAGTGACCTaGCAAAGGATGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: SVSGARRLHNPHWTGRNWRVLVT*QRMKIH
Trigger: ATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCT...CCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp CTCTTCGTTGTTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTGGAACCGCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: LFVVGLHTLCWYSRLLEPPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...CGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAACAACGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS GCA 90 bp CCTCTTGCTCCTGACCAGGTCCAGCAGCAGAGGTGCAAGTCCCTCTaGAAAGCATTTGCAAGAAGGAAGAGGAAAGTTGTCCAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PLAPDQVQQQRCKSL*KAFARRKRKVVQRS
Trigger: GCTTCTCTGGACAACTTTCCTCTTCCTTCTTGCAAATGCTTTGCAGAGGGACTTGCACCTCTGCTGCTGGACCTGGTCAGGAGCAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553303.1
CDS-3UTR CAA 90 bp TCTTCGTTGTTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTGGAACCGAACCGTTGCCAGGCCGTaGCTAAGGGCTGGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: SSLLVCILYAGTHAYWNRTVARP*LRAGSS
Trigger: ACTGGACCCAGCCCTTAGCAACGGCCTGGCAACGGT...TCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAACAACGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS TCA 90 bp AGGAAAAACAGGCAGCAATCTTTGCTGTTCTGCAGCCTCCGCTGGTaGTACCTAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTA +
Preference number: 5 (lower is better)
Translates to: RKNRQQSLLFCSLRW*YLGKQGLEWTSSKL
Trigger: TAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTAGGTATCACCAGCGGAGGCTGCAGAACAGCAAAGATTGCTGCCTGTTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554102.5
CDS GCA 90 bp AGCACAATGCCAGCATCTGCTTCAGGGGAGACCACAGGAAGCTTTTaGTCGTGGTGGAAGGCGAAGAGGGAATGTGCATTTCATATGGCA +
Preference number: 5 (lower is better)
Translates to: STMPASASGETTGSF*SWWKAKRECAFHMA
Trigger: TGCCATATGAAATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGGCATTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS CCA 90 bp TCTTCGTTGTTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCTCTCCGGCTGCCATCCATGCT +
Preference number: 5 (lower is better)
Translates to: SSLLVCILYAGTHAY*NRAVYCSSPAAIHA
Trigger: AGCATGGATGGCAGCCGGAGAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAACAACGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555401.5
CDS CCA 90 bp CCAGCATCTGCTTCAGGGGAGACCACAGGAAGCTTTTGCTCGTGGTaGAAGGCGAAGAGGGAATGTGCATTTCATATGGCAAGAACGAGA +
Preference number: 5 (lower is better)
Translates to: PASASGETTGSFCSW*KAKRECAFHMARTR
Trigger: TCTCGTTCTTGCCATATGAAATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS CCA 90 bp ATGCCAGCATCTGCTTCAGGGGAGACCACAGGAAGCTTTTGCTCGTaGTGGAAGGCGAAGAGGGAATGTGCATTTCATATGGCAAGAACG +
Preference number: 5 (lower is better)
Translates to: MPASASGETTGSFCS*WKAKRECAFHMART
Trigger: CGTTCTTGCCATATGAAATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS-3UTR CAA 90 bp TGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGAAACCGGTGGGAATTaGGGAATGTGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CIIHTGRGGTGVLLRTICETGGN*GMCFWA
Trigger: GGCCCAGAAGCACATTCCCAAATTCCCACCGGTTTC...ACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp ACAGGGCTCCAGAGCTCAGTTTCCGGGGCCCGGAGGCTGCATAATCCACACTGGAGGAGTGAATGGCAATaGTTTGTTAGAAAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: TGLQSSVSGARRLHNPHWRSEWQ*FVRKEF
Trigger: GAACTCTTTTCTAACAAACAATTGCCATTCACTCCT...CCAGTGTGGATTATGCAGCCTCCGGGCCCCGGAAACTGAGCTCTGGAGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
CDS-3UTR CAA 90 bp TACAGTGCTAAATACACTTTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: YSAKYTLCWYSRLLEPSSPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...ACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CAA 90 bp CGGAGGCTGCATAATCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACAGGGTACTAGTGACCTaGCAAAGGATGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: RRLHNPHWTGRNWSSSQDRVLVT*QRMKIH
Trigger: ATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCT...GTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGATTATGCAGCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp TGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: WIYVDLGVVSLKRVLVTLPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...CAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp AGACCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACAC +
Preference number: 5 (lower is better)
Translates to: RPKFLGCSKSSVKRQVYSPCLVL*QPPQGH
Trigger: GTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGG...ACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CAA 90 bp ACCATATCTGGGAAGGACAGAGGTTGCTCTGACTGCGAGGCTGGCAAGCAGGCTCAAAAAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: TISGKDRGCSDCEAGKQAQKALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTTTTTG...AGCCTGCTTGCCAGCCTCGCAGTCAGAGCAACCTCTGTCCTTCCCAGATATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557724.5
CDS-3UTR CAA 90 bp ATTTGGGAATGTGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTGAGTTTCTCTCTTCGTaGTTGGTCTGCATGCTTACT +
Preference number: 5 (lower is better)
Translates to: IWECASGPSAIQGSRAQFEFLSS*LVCMLT
Trigger: AGTAAGCATGCAGACCAACAACGAAGAGAGAAACTC...AAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557248.5
CDS-3UTR CAA 90 bp TCCACACTGGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTGAGTTTCTCTCTTCGTaGTTGGTCTGCATCTATCCT +
Preference number: 5 (lower is better)
Translates to: STLDGEELEFFSGPFVMTEFLSS*LVCIYP
Trigger: AGGATAGATGCAGACCAACAACGAAGAGAGAAACTC...AGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCCAGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS TCA 90 bp GTCCAGCCAGCCAACCAATCATCTAGGAAAGATGTTAGTAACAAATaGCTTCCCAGATTTGGCAGGATCCACCTGGCCATTCAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: VQPANQSSRKDVSNK*LPRFGRIHLAIQRE
Trigger: CTCTCTCTGAATGGCCAGGTGGATCCTGCCAAATCTGGGAAGTCATTTGTTACTAACATCTTTCCTAGATGATTGGTTGGCTGGCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553626.5
CDS TCA 90 bp TGGGCCTTAAGTGGCAGGGCCCTATGTCAAACAGCGATTAATAGCTaGGATGGAAAACTACCACCTTCTACCCATTTTCAGAAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: WALSGRALCQTAINS*DGKLPPSTHFQKGR
Trigger: CCTTCCCTTCTGAAAATGGGTAGAAGGTGGTAGTTTTCCATCTCAGCTATTAATCGCTGTTTGACATAGGGCCCTGCCACTTAAGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553626.5
CDS CCA 90 bp ACTGGAGCACCCAGATTCATACAAGTACTTCTAGACACTTTATGCTaGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: TGAPRFIQVLLDTLC*YSRLLEPSSLLQLW
Trigger: CCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTCTAGAAGTACTTGTATGAATCTGGGTGCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555534.5
CDS CCA 90 bp CCACCATGGCACATGTATACACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: PPWHMYTLYAGTHAY*NRAVYCSITFGAQV
Trigger: CACTTGAGCACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATACATGTGCCATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553885.5
CDS-3UTR CAA 90 bp GGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTCTCTCTTCGTTGTaGGTCTGCATCTATCCTAGG +
Preference number: 5 (lower is better)
Translates to: GRGGTGVLLRTICDDFTGFLSSL*VCIYPR
Trigger: CCTAGGATAGATGCAGACCAACAACGAAGAGAGAAA...TCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS CCA 90 bp ACTGGAGCACCCAGATTCATACAAGTACTTCTAGACACTTTATGCTaGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTAC +
Preference number: 5 (lower is better)
Translates to: TGAPRFIQVLLDTLC*YSRLLEPSSLLQHY
Trigger: GTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTCTAGAAGTACTTGTATGAATCTGGGTGCTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556870.5
CDS-3UTR CAA 90 bp AGACCAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTGAAACCGGTGGGAATTaGGGAATGTGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RPKFLGCSKSSVKRQVYSETGGN*GMCFWA
Trigger: GGCCCAGAAGCACATTCCCAAATTCCCACCGGTTTC...ACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CAA 90 bp TTTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGGCTAGAACGCCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: FMLVLTLTGTEQSTAALARTPLL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGGCGTTCT...AGCCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555715.5
CDS CCA 90 bp AGCAGTGTTAAGAGGCAAGTTTACAGTGCTAAATACACTTTATGCTaGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: SSVKRQVYSAKYTLC*YSRLLEPSSLLQLW
Trigger: CCAAAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGCACTGTAAACTTGCCTCTTAACACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555515.5
CDS-3UTR CAA 90 bp ATTTGGGAATGTGCTTCTGGGCCTTCTGCCATACAGGGCTCCAGAGCTCAGTTTCAAAAAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: IWECASGPSAIQGSRAQFQKALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTTTTTG...AAACTGAGCTCTGGAGCCCTGTATGGCAGAAGGCCCAGAAGCACATTCCCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS-3UTR CAA 90 bp TGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCATTACTTTTGGTTTCTCTCTTCGTTGTaGGTCTGCATACTTTATGCT +
Preference number: 5 (lower is better)
Translates to: CWYSRLLEPSSLLQHYFWFLSSL*VCILYA
Trigger: AGCATAAAGTATGCAGACCAACAACGAAGAGAGAAA...CCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR CAA 90 bp TGGTCTGCATACTTTATGCTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTACTGCAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: WSAYFMLVLTLTGTEQSTTAALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGT...AGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS GCA 90 bp TCAACATATCAACATCATTTTGCTTTACCGAGTTTTCCTCCGATGTaGAGCCTAAGTCTACTTTCAGGACATGCAGCAGGTGGCGCATTT +
Preference number: 5 (lower is better)
Translates to: STYQHHFALPSFPPM*SLSLLSGHAAGGAF
Trigger: AAATGCGCCACCTGCTGCATGTCCTGAAAGTAGACTTAGGCTGCACATCGGAGGAAAACTCGGTAAAGCAAAATGATGTTGATATGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356583.9
ENST00000393545.9
ENST00000553303.1
ENST00000553626.5
ENST00000556553.5
ENST00000556666.5
CDS CCA 90 bp AAAAAGAAAGCAACGAAGGACAAGGCGCAATCAAATGCAATCCACTaGGAGCAAGCACTCCCGAGGAATGTTTTAAATTTCCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KKKATKDKAQSNAIH*EQALPRNVLNFLLL
Trigger: GAGCAAGAGGAAATTTAAAACATTCCTCGGGAGTGCTTGCTCCCAGTGGATTGCATTTGATTGCGCCTTGTCCTTCGTTGCTTTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553303.1
CDS-3UTR CAA 90 bp GGACGGGGAGGAACTGGAGTTCTTCTCAGGACCATTTGTGATGACTTTACTGGACAAAAAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: GRGGTGVLLRTICDDFTGQKALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTTTTTG...TCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAACTCCAGTTCCTCCCCGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000555515.5
ENST00000555534.5
ENST00000557248.5
CDS TCA 90 bp ACCCAAGACTGGGTAATTTATAAGGTAAGAAGTTTAATTGGCTCATaGTTCTGCAGGCTGTACAGGAAGCACAATGCCAGCATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TQDWVIYKVRSLIGS*FCRLYRKHNASICF
Trigger: GAAGCAGATGCTGGCATTGTGCTTCCTGTACAGCCTGCAGAATCATGAGCCAATTAAACTTCTTACCTTATAAATTACCCAGTCTTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS GCA 90 bp AAAAGCAGTGTTAAGAGGCAAGTTTACAGTGCTAAATACACTTTATaGTGGTACTCACGCTTACTGGAACCGAGCAGTCTACTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: KSSVKRQVYSAKYTL*WYSRLLEPSSLLQL
Trigger: AAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATTTAGCACTGTAAACTTGCCTCTTAACACTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555515.5
CDS-3UTR CAA 90 bp TATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGAGGGTACTAGTGACCTaGCAAAGGATGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: YVDLGVVSLKRVLVTLQRRVLVT*QRMKIH
Trigger: ATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCT...CCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp GGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTACTTAAGTAGATTTTACGAGTaGAAGGGGGCTTCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: GTGNCNYSNGDSRRGRYLSRFYE*KGASGN
Trigger: ATTCCCTGAAGCCCCCTTCAACTCGTAAAATCTACT...TAAGTACCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR CAA 90 bp TTACTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTGGACCATATCTGGGAACTGCAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LLLVLKCPLNRHGGPYLGTAALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGT...TCCCAGATATGGTCCACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554168.5
ENST00000555356.5
CDS-3UTR CAA 90 bp GTATGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTTACCTGTCAAGATTTTaGGCAGATGGTATGGGAACA +
Preference number: 5 (lower is better)
Translates to: VWEQGIAIIAMVTAEEVGYLSRF*ADGMGT
Trigger: TGTTCCCATACCATCTGCCAAAAATCTTGACAGGTA...ACCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATTCCCTGTTCCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS-3UTR CAA 90 bp TGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGTTTCTCTCTTCGTTGTaGGTCTGCATCTATCCTAGG +
Preference number: 5 (lower is better)
Translates to: WIYVDLGVVSLKRVLVTLFLSSL*VCIYPR
Trigger: CCTAGGATAGATGCAGACCAACAACGAAGAGAGAAA...CAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
CDS-3UTR CAA 90 bp ACCCAACACTGGAGCACCCAGATTCATACAAGTACTTCTAGACCAAAATTTCTGGAGTTTCTCTCTTCGTaGTTGGTCTGCATCTATCCT +
Preference number: 5 (lower is better)
Translates to: TQHWSTQIHTSTSRPKFLEFLSS*LVCIYP
Trigger: AGGATAGATGCAGACCAACAACGAAGAGAGAAACTC...CAGAAATTTTGGTCTAGAAGTACTTGTATGAATCTGGGTGCTCCAGTGTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CAA 90 bp TTACTTTTGGTGCTCAAGTGTCCTTTAAATAGGCACGGTGGACCATATCTGGGAGAGTTTCTCTCTTCGTaGTTGGTCTGCATACTTTAT +
Preference number: 5 (lower is better)
Translates to: LLLVLKCPLNRHGGPYLGEFLSS*LVCILY
Trigger: ATAAAGTATGCAGACCAACAACGAAGAGAGAAACTC...TCCCAGATATGGTCCACCGTGCCTATTTAAAGGACACTTGAGCACCAAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554168.5
CDS-3UTR CAA 90 bp CTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTACTGCAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LDLCRLRCSLSEEGTSDLTAALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGT...AAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000556870.5
CDS-3UTR CAA 90 bp ATACACTTGAATAAAGATTTGCTATCAATTTCACAGTGGGCTTGCAGAGCTCTTAATTTCACAGTGGGCTaGCAGAGCTCTTCATGTGGC +
Preference number: 5 (lower is better)
Translates to: IHLNKDLLSISQWACRALNFTVG*QSSSCG
Trigger: GCCACATGAAGAGCTCTGCAAGCCCACTGTGAAATT...AAGAGCTCTGCAAGCCCACTGTGAAATTGATAGCAAATCTTTATTCAAGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554802.1
CDS-3UTR CAA 90 bp TATGTAGACTTAGGTGTAGTCTCTCTGAAGAGGGTACTAGTGACCTTGCAAAGGAGGAGTGAATGGCAATaGTTTGTTAGAAAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: YVDLGVVSLKRVLVTLQRRSEWQ*FVRKEF
Trigger: GAACTCTTTTCTAACAAACAATTGCCATTCACTCCT...CCTTTGCAAGGTCACTAGTACCCTCTTCAGAGAGACTACACCTAAGTCTACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555515.5
ENST00000557248.5
CDS GCA 90 bp AGCACCCAGATTCATACAAGTACTTCTAGACCAAAATTTCTGGGATaGAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTGCTAAATAC +
Preference number: 5 (lower is better)
Translates to: STQIHTSTSRPKFLG*SKSSVKRQVYSAKY
Trigger: GTATTTAGCACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTGGTCTAGAAGTACTTGTATGAATCTGGGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000555515.5
CDS-3UTR CAA 90 bp TGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTGCTAAATACACTTGAGTTTCTCTCTTCGTaGTTGGTCTGCATCAAAATT +
Preference number: 5 (lower is better)
Translates to: WDAAKAVLRGKFTVLNTLEFLSS*LVCIKI
Trigger: AATTTTGATGCAGACCAACAACGAAGAGAGAAACTC...AAGTGTATTTAGCACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CAA 90 bp TTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTAGTCTCTCTGAAGAGAGGGTACTAGTGACCTaGCAAAGGATGAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: FVMTLLDLCRLRCSLSEERVLVT*QRMKIH
Trigger: ATGGATTTTCATCCTTTGCAAGGTCACTAGTACCCT...CTCTTCAGAGAGACTACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553908.5
ENST00000555515.5
ENST00000555534.5
ENST00000556870.5
ENST00000557248.5
CDS-3UTR CAA 90 bp TTCTTCTCAGGACCATTTGTGATGACTTTACTGGATTTATGTAGACTTAGGTGTACTGCAGCATTACTTTaGGTGCTCAAGTGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: FFSGPFVMTLLDLCRLRCTAALL*VLKCPL
Trigger: TAAAGGACACTTGAGCACCAAAAGTAATGCTGCAGT...ACACCTAAGTCTACATAAATCCAGTAAAGTCATCACAAATGGTCCTGAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553908.5
ENST00000556870.5
CDS-3UTR CAA 90 bp CAAAATTTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGCAAGTTTACAGTGCTATTTCTCTCTTCGTTGTaGGTCTGCATCAAAATTTCT +
Preference number: 5 (lower is better)
Translates to: QNFWDAAKAVLRGKFTVLFLSSL*VCIKIS
Trigger: AGAAATTTTGATGCAGACCAACAACGAAGAGAGAAA...TAGCACTGTAAACTTGCCTCTTAACACTGCTTTTGCTGCATCCCAGAAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555356.5
CDS-3UTR CAA 90 bp AATTGCAATTATAGCAATGGTGACAGCAGAAGAGGTAGGTACTTATTTCTCTTATCGAATGGGATTATATaGCCACACAGGGACCATTAC +
Preference number: 5 (lower is better)
Translates to: NCNYSNGDSRRGRYLFLLSNGII*PHRDHY
Trigger: GTAATGGTCCCTGTGTGGCAATATAATCCCATTCGA...TAAGAGAAATAAGTACCTACCTCTTCTGCTGTCACCATTGCTATAATTGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556406.5
CDS TCA 90 bp ATCCATTTGAAATCTCAACCTTTTCAGGGTCACTATCACCTTCAATaGCATTCACAGAAGTTTCCCGATCTGTTAAACTGTCTGAAATAC +
Preference number: 5 (lower is better)
Translates to: IHLKSQPFQGHYHLQ*HSQKFPDLLNCLKY
Trigger: GTATTTCAGACAGTTTAACAGATCGGGAAACTTCTGTGAATGTCATTGAAGGTGATAGTGACCCTGAAAAGGTTGAGATTTCAAATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356583.9
ENST00000393545.9
ENST00000553626.5
ENST00000556553.5
ENST00000556666.5
CDS GCA 90 bp ATGGCAGCTTACTTTTATAGACTCCTTACTACACACCACAAACTGTaGCAAGCATTTACTCACATCATTAGATTCAATCTTTACAATGAC +
Preference number: 5 (lower is better)
Translates to: MAAYFYRLLTTHHKL*QAFTHIIRFNLYND
Trigger: GTCATTGTAAAGATTGAATCTAATGATGTGAGTAAATGCTTGGCACAGTTTGTGGTGTGTAGTAAGGAGTCTATAAAAGTAAGCTGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553626.5
CDS GCA 72 bp GTAGGAAGCGCCCCAAGGGGCGGCCTTGCACTCAGCTaGCCGGACCCGAGGCTGGGAGCGCCGCCTGGAGCG +
Preference number: 6 (lower is better)
Translates to: VGSAPRGGLALS*PDPRLGAPPGA
Trigger: CGCTCCAGGCGGCGCTCCCAGCCTCGGGTCCGGGCAGCTGAGTGCAAGGCCGCCCCTTGGGGCGCTTCCTAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS GCA 72 bp GTGAGTCGCTATTGTGACGTCACGGCGCAGGGGACGTaGGTTCCGCAGCCCCGCCTGCGGGATACCCGGTAC +
Preference number: 6 (lower is better)
Translates to: VSRYCDVTAQGT*VPQPRLRDTRY
Trigger: GTACCGGGTATCCCGCAGGCGGGGCTGCGGAACGCACGTCCCCTGCGCCGTGACGTCACAATAGCGACTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS TCA 72 bp CCGTTGCTAAGGGCTGGGTCCAGTGAGTCGCTATTGTaGCGTCACGGCGCAGGGGACGTGCGTTCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: PLLRAGSSESLL*RHGAGDVRSAA
Trigger: GGCTGCGGAACGCACGTCCCCTGCGCCGTGACGTCACAATAGCGACTCACTGGACCCAGCCCTTAGCAACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS CCA 72 bp GAGCGACCTCCTGTCAGGATCCGAGTCACCAGCACCTaGCAGGCTCTGTCCCTGCGGGAAGAGCAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: ERPPVRIRVTST*QALSLREEQGE
Trigger: CTCTCCCTGCTCTTCCCGCAGGGACAGAGCCTGCCAGGTGCTGGTGACTCGGATCCTGACAGGAGGTCGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS GCA 72 bp CCGAGCAGTCTACTGCAGCTCTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCGCCGCAGGGACACGCT +
Preference number: 6 (lower is better)
Translates to: PSSLLQLSGCHP*LVLLQPPQGHA
Trigger: AGCGTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGAGAGCTGCAGTAGACTGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555401.5
CDS CAA 72 bp CTGCAGCTCTCCGGCTGCCATCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACACGCTGTATCCCCTTCG +
Preference number: 6 (lower is better)
Translates to: LQLSGCHPCLVL*QPPQGHAVSPS
Trigger: CGAAGGGGATACAGCGTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGAGAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555401.5
CDS CAA 90 bp AGCAGTCTACTGCAGCTCTCCGGCTGCCATCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACACGCTGTATCCCCTTCGGTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: SSLLQLSGCHPCLVL*QPPQGHAVSPSVLP
Trigger: GGGAAGGACCGAAGGGGATACAGCGTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGAGAGCTGCAGTAGACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555401.5
CDS CAA 90 bp ACAGCTGCCCTTTACCTCTCCGGCTGCCATCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACACGCTGTATCCCCTTCGGTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: TAALYLSGCHPCLVL*QPPQGHAVSPSVLP
Trigger: GGGAAGGACCGAAGGGGATACAGCGTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAGGGCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS TCA 72 bp AACCGTTGCCAGGCCGTTGCTAAGGGCTGGGTCCAGTaGGTCGCTATTGTGACGTCACGGCGCAGGGGACGT +
Preference number: 6 (lower is better)
Translates to: NRCQAVAKGWVQ*VAIVTSRRRGR
Trigger: ACGTCCCCTGCGCCGTGACGTCACAATAGCGACTCACTGGACCCAGCCCTTAGCAACGGCCTGGCAACGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS GCA 72 bp AGGGGCATCGAGCCCCAGTCTGTTGCTCTGGGATCCTaGCAGTCTTCCGCAGAGCGACCTCCTGTCAGGATC +
Preference number: 6 (lower is better)
Translates to: RGIEPQSVALGS*QSSAERPPVRI
Trigger: GATCCTGACAGGAGGTCGCTCTGCGGAAGACTGGCAGGATCCCAGAGCAACAGACTGGGGCTCGATGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS GCA 72 bp CTGACAGCTGCCCTTTACCTCTCCGGCTGCCATCCATaGTTAGTCCTCTTGCAGCCGCCGCAGGGACACGCT +
Preference number: 6 (lower is better)
Translates to: LTAALYLSGCHP*LVLLQPPQGHA
Trigger: AGCGTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAGGGCAGCTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS CAA 72 bp CTTTACCTCTCCGGCTGCCATCCATGCTTAGTCCTCTaGCAGCCGCCGCAGGGACACGCTGTATCCCCTTCG +
Preference number: 6 (lower is better)
Translates to: LYLSGCHPCLVL*QPPQGHAVSPS
Trigger: CGAAGGGGATACAGCGTGTCCCTGCGGCGGCTGCAAGAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554168.5
ENST00000555356.5
ENST00000557724.5
CDS TCA 72 bp AGGCAGCAATCTTTGCTGTTCTGCAGCCTCCGCTGGTaGTACCTAGGCAAACAGGGTCTGGAGTGGACCTCC +
Preference number: 6 (lower is better)
Translates to: RQQSLLFCSLRW*YLGKQGLEWTS
Trigger: GGAGGTCCACTCCAGACCCTGTTTGCCTAGGTATCACCAGCGGAGGCTGCAGAACAGCAAAGATTGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554102.5
CDS CCA 72 bp CGTGGTGGAAGGCGAAGAGGGAATGTGCATTTCATATaGCAAGAACGAGAGGGGAAGGCTGTGGGGGCATAC +
Preference number: 6 (lower is better)
Translates to: RGGRRRGNVHFI*QEREGKAVGAY
Trigger: GTATGCCCCCACAGCCTTCCCCTCTCGTTCTTGCCATATGAAATGCACATTCCCTCTTCGCCTTCCACCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS CAA 72 bp GCCAGCATCTGCTTCAGGGGAGACCACAGGAAGCTTTaGCTCGTGGTGGAAGGCGAAGAGGGAATGTGCATT +
Preference number: 6 (lower is better)
Translates to: ASICFRGDHRKL*LVVEGEEGMCI
Trigger: AATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS GCA 72 bp CCAGCATCTGCTTCAGGGGAGACCACAGGAAGCTTTTaGTCGTGGTGGAAGGCGAAGAGGGAATGTGCATTT +
Preference number: 6 (lower is better)
Translates to: PASASGETTGSF*SWWKAKRECAF
Trigger: AAATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS GCA 72 bp TTCTGCAGGCTGTACAGGAAGCACAATGCCAGCATCTaGTTCAGGGGAGACCACAGGAAGCTTTTGCTCGTG +
Preference number: 6 (lower is better)
Translates to: FCRLYRKHNASI*FRGDHRKLLLV
Trigger: CACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGGCATTGTGCTTCCTGTACAGCCTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS GCA 72 bp TGGCTCATGATTCTGCAGGCTGTACAGGAAGCACAATaGCAGCATCTGCTTCAGGGGAGACCACAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: WLMILQAVQEAQ*QHLLQGRPQEA
Trigger: AGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGGCATTGTGCTTCCTGTACAGCCTGCAGAATCATGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS CCA 72 bp TTGGTCTGCATACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCTCTCCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LVCILYAGTHAY*NRAVYCSSPAA
Trigger: GGCAGCCGGAGAGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTATGCAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555401.5
CDS CCA 72 bp GCTTCAGGGGAGACCACAGGAAGCTTTTGCTCGTGGTaGAAGGCGAAGAGGGAATGTGCATTTCATATGGCA +
Preference number: 6 (lower is better)
Translates to: ASGETTGSFCSW*KAKRECAFHMA
Trigger: TGCCATATGAAATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS CCA 72 bp GTGGACCTCCAGCAAACTACGGCAGACACTTTATGCTaGTACTCACGCTTACTGGAACCGAGCAGTCTACTG +
Preference number: 6 (lower is better)
Translates to: VDLQQTTADTLC*YSRLLEPSSLL
Trigger: CAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTCTGCCGTAGTTTGCTGGAGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554102.5
CDS CAA 90 bp AAGCACAATGCCAGCATCTGCTTCAGGGGAGACCACAGGAAGCTTTaGCTCGTGGTGGAAGGCGAAGAGGGAATGTGCATTTCATATGGC +
Preference number: 6 (lower is better)
Translates to: KHNASICFRGDHRKL*LVVEGEEGMCISYG
Trigger: GCCATATGAAATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTTCCTGTGGTCTCCCCTGAAGCAGATGCTGGCATTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS GCA 72 bp AAGCTTTTGCTCGTGGTGGAAGGCGAAGAGGGAATGTaGATTTCATATGGCAAGAACGAGAGGGGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: KLLLVVEGEEGM*ISYGKNERGRL
Trigger: CAGCCTTCCCCTCTCGTTCTTGCCATATGAAATGCACATTCCCTCTTCGCCTTCCACCACGAGCAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS CAA 90 bp GGTGCAAGTCCCTCTGCAAAGCATTTGCAAGAAGGAAGAGGAAAGTaGTCCAGAGAAGCAGGAGCTTCAACTAAGAAGTCCTCTCCTAGC +
Preference number: 6 (lower is better)
Translates to: GASPSAKHLQEGRGK*SREAGASTKKSSPS
Trigger: GCTAGGAGAGGACTTCTTAGTTGAAGCTCCTGCTTCTCTGGACAACTTTCCTCTTCCTTCTTGCAAATGCTTTGCAGAGGGACTTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553303.1
CDS GCA 72 bp CAAAAAGAAAGCAACGAAGGACAAGGCGCAATCAAATaGAATCCACTGGGAGCAAGCACTCCCGAGGAATGT +
Preference number: 6 (lower is better)
Translates to: QKESNEGQGAIK*NPLGASTPEEC
Trigger: ACATTCCTCGGGAGTGCTTGCTCCCAGTGGATTGCATTTGATTGCGCCTTGTCCTTCGTTGCTTTCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553303.1
CDS CCA 72 bp GCAACGAAGGACAAGGCGCAATCAAATGCAATCCACTaGGAGCAAGCACTCCCGAGGAATGTTTTAAATTTC +
Preference number: 6 (lower is better)
Translates to: ATKDKAQSNAIH*EQALPRNVLNF
Trigger: GAAATTTAAAACATTCCTCGGGAGTGCTTGCTCCCAGTGGATTGCATTTGATTGCGCCTTGTCCTTCGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553303.1
CDS TCA 72 bp GAGTTGATAACTCCATGTCATGATTATTGTCGCCTTTaGCACTGGAGAACGAGTTTTCCTCCGATGTGCAGC +
Preference number: 6 (lower is better)
Translates to: ELITPCHDYCRL*HWRTSFPPMCS
Trigger: GCTGCACATCGGAGGAAAACTCGTTCTCCAGTGTCAAAGGCGACAATAATCATGACATGGAGTTATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000045347.11
CDS CCA 72 bp CCCAGATTCATACAAGTACTTCTAGACACTTTATGCTaGTACTCACGCTTACTGGAACCGAGCAGTCTACTG +
Preference number: 6 (lower is better)
Translates to: PRFIQVLLDTLC*YSRLLEPSSLL
Trigger: CAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTCTAGAAGTACTTGTATGAATCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555534.5
ENST00000556870.5
CDS TCA 72 bp GCCAACCAATCATCTAGGAAAGATGTTAGTAACAAATaGCTTCCCAGATTTGGCAGGATCCACCTGGCCATT +
Preference number: 6 (lower is better)
Translates to: ANQSSRKDVSNK*LPRFGRIHLAI
Trigger: AATGGCCAGGTGGATCCTGCCAAATCTGGGAAGTCATTTGTTACTAACATCTTTCCTAGATGATTGGTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553626.5
CDS CCA 72 bp TGTAAGACTTCTCAGCCCAAATGTCCATTGACATTTTaGGCTGGTTGTATAATTCTCTGTTGTGGGGGTGCT +
Preference number: 6 (lower is better)
Translates to: CKTSQPKCPLTF*AGCIILCCGGA
Trigger: AGCACCCCCACAACAGAGAATTATACAACCAGCCCAAAATGTCAATGGACATTTGGGCTGAGAAGTCTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556553.5
CDS CCA 72 bp CACATGTATACACTTTATGCTGGTACTCACGCTTACTaGAACCGAGCAGTCTACTGCAGCATTACTTTTGGT +
Preference number: 6 (lower is better)
Translates to: HMYTLYAGTHAY*NRAVYCSITFG
Trigger: ACCAAAAGTAATGCTGCAGTAGACTGCTCGGTTCCAGTAAGCGTGAGTACCAGCATAAAGTGTATACATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553885.5
CDS TCA 72 bp TGGGTAATTTATAAGGTAAGAAGTTTAATTGGCTCATaGTTCTGCAGGCTGTACAGGAAGCACAATGCCAGC +
Preference number: 6 (lower is better)
Translates to: WVIYKVRSLIGS*FCRLYRKHNAS
Trigger: GCTGGCATTGTGCTTCCTGTACAGCCTGCAGAATCATGAGCCAATTAAACTTCTTACCTTATAAATTACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556666.5
CDS CAA 72 bp ATTCAGTTGGTGAAGGGAATATCTCGTTCTCATCCTTaGGTGCCGACAATAACATATCCAAAGCCTTTTGGT +
Preference number: 6 (lower is better)
Translates to: IQLVKGISRSHP*VPTITYPKPFG
Trigger: ACCAAAAGGCTTTGGATATGTTATTGTCGGCACCAAAGGATGAGAACGAGATATTCCCTTCACCAACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356583.9
ENST00000393545.9
ENST00000553626.5
ENST00000556553.5
ENST00000556666.5
CDS TCA 72 bp AAATCTCAACCTTTTCAGGGTCACTATCACCTTCAATaGCATTCACAGAAGTTTCCCGATCTGTTAAACTGT +
Preference number: 6 (lower is better)
Translates to: KSQPFQGHYHLQ*HSQKFPDLLNC
Trigger: ACAGTTTAACAGATCGGGAAACTTCTGTGAATGTCATTGAAGGTGATAGTGACCCTGAAAAGGTTGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356583.9
ENST00000393545.9
ENST00000553626.5
ENST00000556553.5
ENST00000556666.5
CDS GCA 72 bp GACCTTCTGTATACTGGCTATATCATGTATGATAAGTaGCACCAACAGATTATTCTTCACAGTCTAAATAGC +
Preference number: 6 (lower is better)
Translates to: DLLYTGYIMYDK*HQQIILHSLNS
Trigger: GCTATTTAGACTGTGAAGAATAATCTGTTGGTGGCACTTATCATACATGATATAGCCAGTATACAGAAGGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553626.5
CDS GCA 72 bp TACTTTTATAGACTCCTTACTACACACCACAAACTGTaGCAAGCATTTACTCACATCATTAGATTCAATCTT +
Preference number: 6 (lower is better)
Translates to: YFYRLLTTHHKL*QAFTHIIRFNL
Trigger: AAGATTGAATCTAATGATGTGAGTAAATGCTTGGCACAGTTTGTGGTGTGTAGTAAGGAGTCTATAAAAGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553626.5