RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPATA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000145375

Ensembl transcript IDs: ENST00000274008.5, ENST00000422835.2, ENST00000674886.1, ENST00000675392.1, ENST00000675612.1

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGCTCACTGCAAGCTCCGTCTCCCGGGTTTACGCCATTCTCCTaGCTCAGCCTCCCGAGTAACTGGGACTACAGGCGCCCACCACCA +
Preference number: 1 (lower is better)
Translates to: LSSLQAPSPGFTPFS*LSLPSNWDYRRPPP
Trigger: TGGTGGTGGGCGCCTGTAGTCCCAGTTACTCGGGAGGCTGAGGCAGGAGAATGGCGTAAACCCGGGAGACGGAGCTTGCAGTGAGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 90 bp AAGTCTTGTTTTCCAGATCTGCAGCGTCCAAGAGAACCTTCTGAATaGTGGGAATGTTTTCTACTCTGTCCAGTGTGGCAGACCCTTGCC +
Preference number: 1 (lower is better)
Translates to: KSCFPDLQRPREPSE*WECFLLCPVWQTLA
Trigger: GGCAAGGGTCTGCCACACTGGACAGAGTAGAAAACATTCCCATCATTCAGAAGGTTCTCTTGGACGCTGCAGATCTGGAAAACAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 90 bp ATGGAAGTCTTGTTTTCCAGATCTGCAGCGTCCAAGAGAACCTTCTaGATGATGGGAATGTTTTCTACTCTGTCCAGTGTGGCAGACCCT +
Preference number: 1 (lower is better)
Translates to: MEVLFSRSAASKRTF*MMGMFSTLSSVADP
Trigger: AGGGTCTGCCACACTGGACAGAGTAGAAAACATTCCCATCATTCAGAAGGTTCTCTTGGACGCTGCAGATCTGGAAAACAAGACTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR GCA 90 bp CATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATaGCAAAAAGTAAATTGTCTTCCTAAGACAGGAAGCTGGCCATTT +
Preference number: 1 (lower is better)
Translates to: HPKESGSKANFQPNR*QKVNCLPKTGSWPF
Trigger: AAATGGCCAGCTTCCTGTCTTAGGAAGACAATTTACTTTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CCA 90 bp AGCTTGAGCATTATGTGCAGAGCTCAGTTGTCACTTCATGTTATATaGGCTGAAGGCTTTGAGTGGCTATTAATATCTAAACTTGTTGAT +
Preference number: 1 (lower is better)
Translates to: SLSIMCRAQLSLHVI*AEGFEWLLISKLVD
Trigger: ATCAACAAGTTTAGATATTAATAGCCACTCAAAGCCTTCAGCCCATATAACATGAAGTGACAACTGAGCTCTGCACATAATGCTCAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 90 bp AAAATCTCCTGGAACACTAAAAAGACATGTCAATGTGAATATCCCTaGCATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAAC +
Preference number: 1 (lower is better)
Translates to: KISWNTKKTCQCEYP*HPKESGSKANFQPN
Trigger: GTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATTGACATGTCTTTTTAGTGTTCCAGGAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR GCA 90 bp TTGAGGTTGTATTTATTTCAATATGGAAGTCTTGTTTTCCAGATCTaGAGCGTCCAAGAGAACCTTCTGAATGATGGGAATGTTTTCTAC +
Preference number: 1 (lower is better)
Translates to: LRLYLFQYGSLVFQI*SVQENLLNDGNVFY
Trigger: GTAGAAAACATTCCCATCATTCAGAAGGTTCTCTTGGACGCTGCAGATCTGGAAAACAAGACTTCCATATTGAAATAAATACAACCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CAA 90 bp AAGCCTCCTTGTGGTCTTCCTGGCCAGCAGGAGATTTTTCTTTTCTaGTCTACCCTTGTGCTGAGAGTGTTGGTTATTATAGAGCTTGAG +
Preference number: 2 (lower is better)
Translates to: KPPCGLPGQQEIFLF*STLVLRVLVIIELE
Trigger: CTCAAGCTCTATAATAACCAACACTCTCAGCACAAGGGTAGACAAGAAAAGAAAAATCTCCTGCTGGCCAGGAAGACCACAAGGAGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR GCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACAGTGAGCTACGACTGTaGCACTGCATTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNSELRL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAGTCGTAGCTCACT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR GCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCACCACCCAGCCTCCTaGACCAGAGTCATTTCAAGC +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNHHPAS*TRVISS
Trigger: GCTTGAAATGACTCTGGTGCAGGAGGCTGGGTGGTG...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACAGAAAGCCTCCTTGTaGTCTTCCTGGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKQKASL*SSWPAG
Trigger: TCCTGCTGGCCAGGAAGACCACAAGGAGGCTTTCTG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGAGCCTCCCGAGTAACTaGGACTACAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWSLPSN*DYRRPP
Trigger: TGGTGGGCGCCTGTAGTCCCAGTTACTCGGGAGGCT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACAGTTTGAAGGTGCAGTaGGCTACGACTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNSLKVQ*ATTVPL
Trigger: CAGTGGCACAGTCGTAGCTCACTGCACCTTCAAACT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGCCCATTGCCAGTTTCTaGTCTGAAGTCAGAGAATCA +
Preference number: 2 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMPIASF*SEVRES
Trigger: TGATTCTCTGACTTCAGATCAGAAACTGGCAATGGG...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR GCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACAACTTCCAACTCCTTTaGAGGACTACAGTGCTATGG +
Preference number: 2 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDNFQLL*RTTVLW
Trigger: CCATAGCACTGTAGTCCTGCAAAGGAGTTGGAAGTT...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR GCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACTGGTGTGTGCCACCATaGCCAGCTTTCATACACTCT +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNWCVPP*PAFIHS
Trigger: AGAGTGTATGAAAGCTGGGCATGGTGGCACACACCA...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCACTCAAACAGATTCTaGAAAAAGAAATCGCTTCAT +
Preference number: 2 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLHSNRF*KKKSLH
Trigger: ATGAAGCGATTTCTTTTTCCAGAATCTGTTTGAGTG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
3UTR-3UTR CCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCCACATAAGCCTGGCTaGCACATTGGGCCATTTTAC +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNPHKPG*HIGPFY
Trigger: GTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGG...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CAA 90 bp ATATTCCCATCACCCACCCTAAGATATGAAACATTACTGACACAATaGAAGCAGCTCAACTTTTCTCCCCTGAGGAAATTCCTCACCAGT +
Preference number: 2 (lower is better)
Translates to: IFPSPTLRYETLLTQ*KQLNFSPLRKFLTS
Trigger: ACTGGTGAGGAATTTCCTCAGGGGAGAAAAGTTGAGCTGCTTCAATTGTGTCAGTAATGTTTCATATCTTAGGGTGGGTGATGGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAAGAAACATGGGGTTGTaGGCACTGTGGATTGCATTG +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKRNMGL*ALWIAL
Trigger: CAATGCAATCCACAGTGCCCACAACCCCATGTTTCT...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAGATTTTCCAGAAACATaGGGTTGTGGGCACTGTGGA +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKDFPET*GCGHCG
Trigger: TCCACAGTGCCCACAACCCCATGTTTCTGGAAAATC...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGAAAACCCAAGCCTACTaGTCTAGGCTTAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWKTQAY*SRLRVG
Trigger: GCCCACTCTAAGCCTAGATCAGTAGGCTTGGGTTTT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR GCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACTTGTTTTCCAGATCTaGAGCGTCCAAGAGAACCTT +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKLVFQI*SVQENL
Trigger: AAGGTTCTCTTGGACGCTGCAGATCTGGAAAACAAG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCACCAGGTAAAACTGATTaGAACTTATGCTCAGAGATA +
Preference number: 2 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPPGKTD*NLCSEI
Trigger: TATCTCTGAGCATAAGTTTCAATCAGTTTTACCTGG...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
3UTR-3UTR TCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAATCCTTGTTTAGGCCCTaGAGGATAAGTTTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKSLFRP*RISFPL
Trigger: AAGAGGAAAACTTATCCTTCAGGGCCTAAACAAGGA...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAATCTTTGTCCCCTAGGTaGGTTTATGTACTGGTAAAC +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKSLSPR*VYVLVN
Trigger: GTTTACCAGTACATAAACCCACCTAGGGGACAAAGA...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAATCACTTCATGTTATATaGGCTGAAGGCTTTGAGTGG +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKSLHVI*AEGFEW
Trigger: CCACTCAAAGCCTTCAGCCCATATAACATGAAGTGA...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACAGAGAACCTTCTGAATaGTGGGAATGTTTTCTACTC +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNREPSE*WECFLL
Trigger: GAGTAGAAAACATTCCCATCATTCAGAAGGTTCTCT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAAGTTGCCTTCCAAAGTaGTTGTACCAATTTATGCTC +
Preference number: 2 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKSCLPK*LYQFML
Trigger: GAGCATAAATTGGTACAACCACTTTGGAAGGCAACT...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCCAGGTAAAACTGATTaGAACTTATGCTCAGAGATA +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNPGKTD*NLCSEI
Trigger: TATCTCTGAGCATAAGTTTCAATCAGTTTTACCTGG...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACAGTGGTTATTGTATTTaGCAACACAGTTCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNSGYCI*QHSSKW
Trigger: CCACTTAGAACTGTGTTGTCAAATACAATAACCACT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGGTTATTATAGAGCTTaGGCATTATGTGCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWGYYRA*ALCAEL
Trigger: GAGCTCTGCACATAATGCTCAAGCTCTATAATAACC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR TCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACACCCACCCTAAGATATaGAACATTACTGACACAATT +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNTHPKI*NITDTI
Trigger: AATTGTGTCAGTAATGTTTCATATCTTAGGGTGGGT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGAAAGAAATCGCTTCATaGGATGAACAGACTAGGTCG +
Preference number: 2 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWKEIAS*DEQTRS
Trigger: CGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACATTGGGCCATTTTACTaGCTGGCCTTCAAAAATAAA +
Preference number: 2 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNIGPFY*LAFKNK
Trigger: TTTATTTTTGAAGGCCAGCCAGTAAAATGGCCCAAT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR GCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGTGATCAAGTTTAAGTaGACATTCTTCCCATTGCCA +
Preference number: 2 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWVIKFK*TFFPLP
Trigger: TGGCAATGGGAAGAATGTGCACTTAAACTTGATCAC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGCTGAAGGCTTTGAGTaGCTATTAATATCTAAACTT +
Preference number: 2 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWAEGFE*LLISKL
Trigger: AAGTTTAGATATTAATAGCCACTCAAAGCCTTCAGC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR GCA 72 bp GGAGGCAGAGCTTGCAGTGAGCCTAGATCACGCCACTaGACTCTAGCCTGGGCGACAGAGCAGCGAGACTCT +
Preference number: 3 (lower is better)
Translates to: GGRACSEPRSRH*TLAWATEQRDS
Trigger: AGAGTCTCGCTGCTCTGTCGCCCAGGCTAGAGTGCAGTGGCGTGATCTAGGCTCACTGCAAGCTCTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 72 bp GATCTCGCTACATTGACCAGGCTGGATTCAAACTCCTaGGTTCAAGCGATCCTCTCACCTCAACCCCCGACC +
Preference number: 3 (lower is better)
Translates to: DLATLTRLDSNS*VQAILSPQPPT
Trigger: GGTCGGGGGTTGAGGTGAGAGGATCGCTTGAACTCAGGAGTTTGAATCCAGCCTGGTCAATGTAGCGAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 72 bp TTTCCAGATCTGCAGCGTCCAAGAGAACCTTCTGAATaGTGGGAATGTTTTCTACTCTGTCCAGTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: FPDLQRPREPSE*WECFLLCPVWQ
Trigger: CTGCCACACTGGACAGAGTAGAAAACATTCCCATCATTCAGAAGGTTCTCTTGGACGCTGCAGATCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CAA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACAGTCAGGAGGATCACTaGAGCTCCAGGAGTTTGAAG +
Preference number: 3 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDSQEDH*SSRSLK
Trigger: CTTCAAACTCCTGGAGCTCAAGTGATCCTCCTGACT...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 72 bp TTGTTTTCCAGATCTGCAGCGTCCAAGAGAACCTTCTaGATGATGGGAATGTTTTCTACTCTGTCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: LFSRSAASKRTF*MMGMFSTLSSV
Trigger: CACACTGGACAGAGTAGAAAACATTCCCATCATTCAGAAGGTTCTCTTGGACGCTGCAGATCTGGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CCA 72 bp TATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTaGCACATTGGGCCATTTTACTGGCTGGCCTTCAAA +
Preference number: 3 (lower is better)
Translates to: YVYLKTRPHKPG*HIGPFYWLAFK
Trigger: TTTGAAGGCCAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
3UTR-3UTR CAA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGAGTCAGAAAGCCTCCTaGTGGTCTTCCTGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWSQKAS*WSSWPA
Trigger: TGCTGGCCAGGAAGACCACAAGGAGGCTTTCTGACT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR-3UTR CAA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACTGCCTTCCAAAGTGGTaGTACCAATTTATGCTCCCA +
Preference number: 3 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDCLPKW*YQFMLP
Trigger: TGGGAGCATAAATTGGTACAACCACTTTGGAAGGCA...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 72 bp ATGAACTTTCCTATTCACTATCTCACTGCATCAATGTaGGACTTGCTCTGGGATATGCACCTAGGAGAACTG +
Preference number: 3 (lower is better)
Translates to: MNFPIHYLTASM*DLLWDMHLGEL
Trigger: CAGTTCTCCTAGGTGCATATCCCAGAGCAAGTCTCACATTGATGCAGTGAGATAGTGAATAGGAAAGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR GCA 72 bp GGGAATTTTCAAAGATCTACAGTGATCAAGTTTAAGTaGACATTCTTCCCATTGCCAGTTTCTGATCTGAAG +
Preference number: 3 (lower is better)
Translates to: GNFQRSTVIKFK*TFFPLPVSDLK
Trigger: CTTCAGATCAGAAACTGGCAATGGGAAGAATGTGCACTTAAACTTGATCACTGTAGATCTTTGAAAATTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CCA 72 bp ACACTCAAACAGATTCTGGAAAAAGAAATCGCTTCATaGGATGAACAGACTAGGTCGCAAATGAAAAAGCTA +
Preference number: 3 (lower is better)
Translates to: TLKQILEKEIAS*DEQTRSQMKKL
Trigger: TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTGTTTGAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
3UTR-3UTR CAA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGTTCAATATGGAAGTCTaGTTTTCCAGATCTGCAGCG +
Preference number: 3 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWFNMEV*FSRSAA
Trigger: CGCTGCAGATCTGGAAAACAAGACTTCCATATTGAA...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR TCA 72 bp TGGAACACTAAAAAGACATGTCAATGTGAATATCCCTaGCATCCGAAAGAATCTGGATCAAAGGCAAACTTT +
Preference number: 3 (lower is better)
Translates to: WNTKKTCQCEYP*HPKESGSKANF
Trigger: AAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATTGACATGTCTTTTTAGTGTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR GCA 72 bp TATTTATTTCAATATGGAAGTCTTGTTTTCCAGATCTaGAGCGTCCAAGAGAACCTTCTGAATGATGGGAAT +
Preference number: 3 (lower is better)
Translates to: YLFQYGSLVFQI*SVQENLLNDGN
Trigger: ATTCCCATCATTCAGAAGGTTCTCTTGGACGCTGCAGATCTGGAAAACAAGACTTCCATATTGAAATAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CCA 72 bp ATTATGTGCAGAGCTCAGTTGTCACTTCATGTTATATaGGCTGAAGGCTTTGAGTGGCTATTAATATCTAAA +
Preference number: 3 (lower is better)
Translates to: IMCRAQLSLHVI*AEGFEWLLISK
Trigger: TTTAGATATTAATAGCCACTCAAAGCCTTCAGCCCATATAACATGAAGTGACAACTGAGCTCTGCACATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR GCA 72 bp AAATTCATAACTTCCAACTCCTTTGCAGGACTACAGTaGTATGGAAATAGATGTCTTATTCCCAGACATAAT +
Preference number: 3 (lower is better)
Translates to: KFITSNSFAGLQ*YGNRCLIPRHN
Trigger: ATTATGTCTGGGAATAAGACATCTATTTCCATAGCACTGTAGTCCTGCAAAGGAGTTGGAAGTTATGAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGGTTGCCGCGAAGTCTaGTCCAGCAGAAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLGCREV*SSRRSP
Trigger: CGGGCTCCTTCTGCTGGATCAGACTTCGCGGCAACC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGAGCAGAAGGAGCCCGTaGCTCCGCACAAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLSRRSP*LRTRGS
Trigger: GCTTCCTCTTGTGCGGAGGCACGGGCTCCTTCTGCT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGAGGCTGGACCTGGATaGCATCACCAGGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLEAGPG*HHQASH
Trigger: GTGTGAGGCCTGGTGATGCCATCCAGGTCCAGCCTC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGACAAGAGGCTGGACCTaGATGGCATCACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLTRGWT*MASPGL
Trigger: GAGGCCTGGTGATGCCATCCAGGTCCAGCCTCTTGT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGCCTGGCTGGCACATTaGGCCATTTTACTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLAWLAH*AILLAG
Trigger: GCCAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGCTCCAACGTATCCATaGGCACTATTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLAPTYP*ALFASC
Trigger: GCAGCTGGCAAATAGTGCTCATGGATACGTTGGAGC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGCCTCCAGGAAATCCTaGCATAGGCCAGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLASRKS*HRPGCI
Trigger: TATACAGCCTGGCCTATGGCAGGATTTCCTGGAGGC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTCCATGAGCACTATTTaGCAGCTGCAGCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLSMSTI*QLQQLS
Trigger: GCTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTTTACGCCATTCTCCTaGCTCAGCCTCCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLFTPFS*LSLPSN
Trigger: GTTACTCGGGAGGCTGAGGCAGGAGAATGGCGTAAA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGCCTCAGTGAGCAAATaGGGTACCCTTCGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLASVSK*GTLRSS
Trigger: ACTGCTTCGAAGGGTACCCCATTTGCTCACTGAGGC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGCAGCATCCAAGGCATaGGGGCGATTTGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPAASKA*GRFVAP
Trigger: TGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAGGCACAGAGACCTTaGGGGGTTTGGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMKAQRP*GVWVRP
Trigger: GGGCCTCACCCAAACCCCTCAAGGTCTCTGTGCCTT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS-3UTR GCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAAGCAGAAGGAGCCCGTaGCTCCGCACAAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPSRRSP*LRTRGS
Trigger: GCTTCCTCTTGTGCGGAGGCACGGGCTCCTTCTGCT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGCCGGTCCTGAGCATTaGGAACTCCAATCTCAATCT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLAGPEH*ELQSQS
Trigger: AGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTTTAGAGCACCCAGGTaGCCCATAGAGAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLFRAPR*PIEKNS
Trigger: GGAGTTCTTCTCTATGGGCCACCTGGGTGCTCTAAA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCCACATAAGCCTGGCTaGCACATTGGGCCATTTTAC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLPHKPG*HIGPFY
Trigger: GTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGTTTGGGAGGCTCAGGTaGGTGGGTCACCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMFGRLR*VGHLRP
Trigger: TGGCCTCAGGTGACCCACCCACCTGAGCCTCCCAAA...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCAGTCCTCCTATATCTaGCCAGGATACATTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLQSSYI*PGYIWD
Trigger: GTCCCAAATGTATCCTGGTCAGATATAGGAGGACTG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCGTCGGTTTGAAGGATaGGTTCATCCAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLRRFEG*VHPGQL
Trigger: AAGTTGACCTGGATGAACTCATCCTTCAAACCGACG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTACAATCTCTGCTCCTaGGTATGCGTCGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLYNLCS*VCVGLK
Trigger: CTTCAAACCGACGCATACTCAGGAGCAGAGATTGTA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGAAAGCCGACTCAATGTaGGCGCTTCAACTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLKADSM*ALQLRE
Trigger: TTCTCTCAGTTGAAGCGCGCACATTGAGTCGGCTTT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGCACCCACAAGAGGCTaGACCTGGATGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMAPTRG*TWMASP
Trigger: TGGTGATGCCATCCAGGTCCAGCCTCTTGTGGGTGC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACGCAGCATCCAAGGCATaGGGGCGATTTGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNAASKA*GRFVAP
Trigger: TGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGC...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGACAGTGCTCAAGGCCTaGGTGAAATGTCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLTVLKA*VKCLFM
Trigger: CATGAAAAGACATTTCACTCAGGCCTTGAGCACTGT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCCCATTGCCAGTTTCTaGTCTGAAGTCAGAGAATCA +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLPIASF*SEVRES
Trigger: TGATTCTCTGACTTCAGATCAGAAACTGGCAATGGG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCAATATCATGCCATCTaGCCCTTTCACTCGCAATAC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLQYHAI*PFHSQY
Trigger: GTATTGCGAGTGAAAGGGGCAGATGGCATGATATTG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGCACCACCCAGCCTCCTaGACCAGAGTCATTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMHHPAS*TRVISS
Trigger: GCTTGAAATGACTCTGGTGCAGGAGGCTGGGTGGTG...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGGGACTACTGGTGTGTaGCACCATGCCCAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMGTTGV*HHAQLS
Trigger: TGAAAGCTGGGCATGGTGGCACACACCAGTAGTCCC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGAGGCTGGACCTGGATaGCATCACCAGGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLEAGPG*HHQASH
Trigger: GTGTGAGGCCTGGTGATGCCATCCAGGTCCAGCCTC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTACTGGTTTCCATGCTaGACTGTTCAAAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLYWFPC*TVQRPF
Trigger: GAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGATAACTCCAGGCTACTaGTTTCCATGCTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLITPGY*FPCWTV
Trigger: AACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTAT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCTTGATGTTGGGATCTaGGTATCCTCCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLLDVGI*VSSRSN
Trigger: GTTAGATCTGGAGGATACCCAGATCCCAACATCAAG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCTTGTCTATCCTATCTaGACGGTTAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLLVYPI*TVSSCQ
Trigger: TTGGCAGCTACTAACCGTCCAGATAGGATAGACAAG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGCAGAAAGCCTCCTTGTaGTCTTCCTGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMQKASL*SSWPAG
Trigger: TCCTGCTGGCCAGGAAGACCACAAGGAGGCTTTCTG...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGGTTGCCGCGAAGTCTaGTCCAGCAGAAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWGCREV*SSRRSP
Trigger: CGGGCTCCTTCTGCTGGATCAGACTTCGCGGCAACC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGTGTCAGAGTCACTCTaGGGCCCTCCCAATATCATG +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPVSESL*GPPNIM
Trigger: CATGATATTGGGAGGGCCTCAGAGTGACTCTGACAC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCTGACAGGCATGGAGTaGAACTGCAGCTTAAATATT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLLTGME*NCSLNI
Trigger: AATATTTAAGCTGCAGTTTCACTCCATGCCTGTCAG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTATCCCATCAGCAGATCTaGGGCCCCACCCATCACATC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLSHQQI*GPTHHI
Trigger: GATGTGATGGGTGGGGCCTCAGATCTGCTGATGGGA...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGGCCTCCAGGAAATCCTaGCATAGGCCAGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMASRKS*HRPGCI
Trigger: TATACAGCCTGGCCTATGGCAGGATTTCCTGGAGGC...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACACTCAGGCCGACCTTaGCTCCAGGAAATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKHSGRP*LQEILP
Trigger: TGGCAGGATTTCCTGGAGGCAAGGTCGGCCTGAGTG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAATCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKSGGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCCGCCTCCTGA...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCCTAGATCACGCCACTaGACTCTAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNPRSRH*TLAWAT
Trigger: TGTCGCCCAGGCTAGAGTGCAGTGGCGTGATCTAGG...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAACAAGAGGCTGGACCTaGATGGCATCACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLTRGWT*MASPGL
Trigger: GAGGCCTGGTGATGCCATCCAGGTCCAGCCTCTTGT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTCCTCCAGATCTAACTaGCTTAGCTGTAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLSSRSN*LSCKDN
Trigger: GTTATCCTTACAGCTAAGCCAGTTAGATCTGGAGGA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGCCTCAGTGAGCAAATaGGGTACCCTTCGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMASVSK*GTLRSS
Trigger: ACTGCTTCGAAGGGTACCCCATTTGCTCACTGAGGC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAGCCTGGCTGGCACATTaGGCCATTTTACTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKAWLAH*AILLAG
Trigger: GCCAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGC...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGATATCTAGCCGGTCCTaGGCATTGGGAACTCCAATC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMISSRS*ALGTPI
Trigger: GATTGGAGTTCCCAATGCTCAGGACCGGCTAGATAT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAATATCTAGCCGGTCCTaGGCATTGGGAACTCCAATC +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPISSRS*ALGTPI
Trigger: GATTGGAGTTCCCAATGCTCAGGACCGGCTAGATAT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGGAGTATGCGTCGGTTTaGAGGATGAGTTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMEYASV*RMSSSR
Trigger: CCTGGATGAACTCATCCTTCAAACCGACGCATACTC...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGAGTATGCGTCGGTTTaGAGGATGAGTTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMEYASV*RMSSSR
Trigger: CCTGGATGAACTCATCCTTCAAACCGACGCATACTC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTCCAAGAGAACCTTCTaGATGATGGGAATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLSKRTF*MMGMFS
Trigger: AGAAAACATTCCCATCATTCAGAAGGTTCTCTTGGA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGGCTACTGGTTTCCATaGTGGACTGTTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMGYWFP*WTVQRP
Trigger: TGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTCTTCTTCAGTAAGTTaGTCATTTCCTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLSSSVS*SFPSLA
Trigger: TGCCAGAGAAGGAAATGAGCAACTTACTGAAGAAGA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACAATGGAAGGCGCCACTaGTCTTGCTTTTCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDNGRRH*SCFSEG
Trigger: ACCTTCCGAAAAGCAAGAGCAGTGGCGCCTTCCATT...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATGGTGTGTGCCACCATaGCCAGCTTTCATACACTCT +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPWCVPP*PAFIHS
Trigger: AGAGTGTATGAAAGCTGGGCATGGTGGCACACACCA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCTAATTGCTTTCAGCTaGCTACTTAATCCTCCTATC +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLLIAFS*LLNPPI
Trigger: GATAGGAGGATTAAGTAGCCAGCTGAAAGCAATTAG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCACATGAGGGCGATTTGTaGCCCCAAGAACCAACACTT +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPHEGDL*PQEPTL
Trigger: AAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATG...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACGCCGGTCCTGAGCATTaGGAACTCCAATCTCAATCT +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDAGPEH*ELQSQS
Trigger: AGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGC...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGAAGAACTCCTTTAGGTaGCTGAATACCCATTCGAAT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLKNSFR*LNTHSN
Trigger: ATTCGAATGGGTATTCAGCCACCTAAAGGAGTTCTT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTAGAGCACCCAGGTaGCCCATAGAGAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPFRAPR*PIEKNS
Trigger: GGAGTTCTTCTCTATGGGCCACCTGGGTGCTCTAAA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGCTCCAACGTATCCATaGGCACTATTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLAPTYP*ALFASC
Trigger: GCAGCTGGCAAATAGTGCTCATGGATACGTTGGAGC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATCATGGCACTGGGTCTaGTATCATTCATTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPSWHWV*YHSLPA
Trigger: TGCAGGCAATGAATGATATCAGACCCAGTGCCATGA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACCAGTCCTCCTATATCTaGCCAGGATACATTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDQSSYI*PGYIWD
Trigger: GTCCCAAATGTATCCTGGTCAGATATAGGAGGACTG...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCACGTCGGTTTGAAGGATaGGTTCATCCAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPRRFEG*VHPGQL
Trigger: AAGTTGACCTGGATGAACTCATCCTTCAAACCGACG...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACTACAATCTCTGCTCCTaGGTATGCGTCGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDYNLCS*VCVGLK
Trigger: CTTCAAACCGACGCATACTCAGGAGCAGAGATTGTA...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCCAGGTAAAACTGATTaGAACTTATGCTCAGAGATA +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLPGKTD*NLCSEI
Trigger: TATCTCTGAGCATAAGTTTCAATCAGTTTTACCTGG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAGTTTGAAGGTGCAGTaGGCTACGACTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLSLKVQ*ATTVPL
Trigger: CAGTGGCACAGTCGTAGCTCACTGCACCTTCAAACT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGCTTTTGGAATCCTCTaGGACGAAGCTACATTCCTG +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPAFGIL*DEATFL
Trigger: CAGGAATGTAGCTTCGTCTCAGAGGATTCCAAAAGC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGACCCACCCTAAGATATaGAACATTACTGACACAATT +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLTHPKI*NITDTI
Trigger: AATTGTGTCAGTAATGTTTCATATCTTAGGGTGGGT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGCTGGATTCAAACTCCTaGGTTCAAGCGATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMLDSNS*VQAILS
Trigger: TGAGAGGATCGCTTGAACTCAGGAGTTTGAATCCAG...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTCACTCGCAATACTTaGAGCTTGTACGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPFTRNT*SLYGRP
Trigger: TGGACGACCGTACAAGCTGCAAGTATTGCGAGTGAA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGCCCTCCCAATATCATaGCATCTGCCCCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLALPIS*HLPLSL
Trigger: GAGTGAAAGGGGCAGATGGCATGATATTGGGAGGGC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTTACTTCTGAACCAATaGCATCCATCAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLLLLNQ*HPSVLR
Trigger: TCTTAACACTGATGGATGGCATTGGTTCAGAAGTAA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAGGCGCCACTGCTCTTaGTTTTCGGAAGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLRRHCS*FSEGLS
Trigger: AGAGAGACCTTCCGAAAAGCAAGAGCAGTGGCGCCT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCAGTGAGCTACGACTGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLSELRL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAGTCGTAGCTCACT...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATCTTCTTGGAAGACATaGTCACAAGGTACCCTAGCC +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPSSWKT*SQGTLA
Trigger: GGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTCTTCTTGGAAGACATaGTCACAAGGTACCCTAGCC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMSSWKT*SQGTLA
Trigger: GGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGCCTTTTCTAATAAGTTaGTCACCGTCAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMPFLIS*SPSESR
Trigger: CCGGGACTCTGACGGTGACCAACTTATTAGAAAAGG...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGCCTTTTCTAATAAGTTaGTCACCGTCAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMPFLIS*SPSESR
Trigger: CCGGGACTCTGACGGTGACCAACTTATTAGAAAAGG...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGATTTCTGTTAAGAGCTaGGCCAAAACACGATCGGCT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMISVKS*AKTRSA
Trigger: AGCCGATCGTGTTTTGGCTCAGCTCTTAACAGAAAT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGGCAGGAGAATTGCTTaGACTCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWGRRIA*TQEAEV
Trigger: AACCTCCGCCTCCTGAGTTCAAGCAATTCTCCTGCC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGTCCTGGCTAACACGGTaGAACCCTGTCTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMSWLTR*NPVSNK
Trigger: TTTATTAGAGACAGGGTTTCACCGTGTTAGCCAGGA...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAGCATTCCAGCCTGGGTaGCACAACAAGATCCTATCT +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKAFQPG*HNKILS
Trigger: AGATAGGATCTTGTTGTGTCACCCAGGCTGGAATGC...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGTGTACCCAATACTCCTaGTTTTCCAGAAACATGGGG +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMCTQYS*FSRNMG
Trigger: CCCCATGTTTCTGGAAAATCAGGAGTATTGGGTACA...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAATCTTTGTCACTCAGTaGCACATCCATTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPIFVTQ*HIHFLS
Trigger: GCTGAGGAAATGGATGTGGCACTGAGTGACAAAGAT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGATCTTTGTCACTCAGTaGCACATCCATTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMIFVTQ*HIHFLS
Trigger: GCTGAGGAAATGGATGTGGCACTGAGTGACAAAGAT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACCAATATCATGCCATCTaGCCCTTTCACTCGCAATAC +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDQYHAI*PFHSQY
Trigger: GTATTGCGAGTGAAAGGGGCAGATGGCATGATATTG...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCTCCATGAGCACTATTTaGCAGCTGCAGCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLSMSTI*QLQQLS
Trigger: GCTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGA...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCAGGCGCCACTGCTCTTaGTTTTCGGAAGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLRRHCS*FSEGLS
Trigger: AGAGAGACCTTCCGAAAAGCAAGAGCAGTGGCGCCT...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAATGGAAGGCGCCACTaGTCTTGCTTTTCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLNGRRH*SCFSEG
Trigger: ACCTTCCGAAAAGCAAGAGCAGTGGCGCCTTCCATT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACCTTGTTTTCCAGATCTaGAGCGTCCAAGAGAACCTT +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDLVFQI*SVQENL
Trigger: AAGGTTCTCTTGGACGCTGCAGATCTGGAAAACAAG...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGGATGCTTTGGTGTGTaGTCATCTTCAAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMGCFGV*SSSKEA
Trigger: TGCTTCCTTTGAAGATGAGCACACACCAAAGCATCC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGCAGAGACATACATATaGGCCTTTAGGATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMAETYI*AFRILV
Trigger: GACCAGAATCCTAAAGGCGCATATGTATGTCTCTGC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS-3UTR CCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACTCAAAGGCCATTCTTTaGGCATCAGTGTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDSKAIL*ASVSES
Trigger: TGACTCTGACACTGATGCCCAAAGAATGGCCTTTGA...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTACTGGTTTCCATGCTaGACTGTTCAAAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMYWFPC*TVQRPF
Trigger: GAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAATGGGTGTCGTAGAGTaGCTTCAGCAAATATCTGAC +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPMGVVE*LQQISD
Trigger: GTCAGATATTTGCTGAAGCCACTCTACGACACCCAT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACATGAGGGCGATTTGTaGCCCCAAGAACCAACACTT +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKHEGDL*PQEPTL
Trigger: AAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTCAGTCCACTCTCATTaGCCAAAGCCTTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMSVHSH*PKPLLS
Trigger: TGATAGCAAAGGCTTTGGCCAATGAGAGTGGACTGA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACCACATAAGCCTGGCTaGCACATTGGGCCATTTTAC +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKPHKPG*HIGPFY
Trigger: GTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACGATCTAGGCTTAGAGTaGGCTTACACTTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDDLGLE*AYTFKG
Trigger: CCCTTTGAAAGTGTAAGCCCACTCTAAGCCTAGATC...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGATAAGGAGTACTTCTTaGTGTTGGGATCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMIRSTS*CWDLGI
Trigger: GATACCCAGATCCCAACATCAAGAAGTACTCCTTAT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACACTTTGCTCCTATGCTaGACTTTAGCAGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDTLLLC*TLAVSL
Trigger: AAGAGAGACTGCTAAAGTTCAGCATAGGAGCAAAGT...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGCTTCAGCAAATATCTaGCGTAACTTTGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMASANI*RNFASV
Trigger: GACTGAAGCAAAGTTACGTCAGATATTTGCTGAAGC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGTTCCAACTTCAGTTTaGTACTTTCCAGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPVPTSV*YFPVLL
Trigger: TAGGAGGACTGGAAAGTATCAAACTGAAGTTGGAAC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGACTCCTTTAGGTGGCTaGATACCCATTCGAATGAAA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMTPLGG*IPIRMK
Trigger: TTTCATTCGAATGGGTATTCAGCCACCTAAAGGAGT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCAAAACCCAAGCCTACTaGTCTAGGCTTAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLKTQAY*SRLRVG
Trigger: GCCCACTCTAAGCCTAGATCAGTAGGCTTGGGTTTT...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATGCCAGTTTCTGATCTaGAGTCAGAGAATCACTTTC +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPCQFLI*SQRITF
Trigger: GAAAGTGATTCTCTGACTTCAGATCAGAAACTGGCA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTCCTTGTTTAGGCCCTaGAGGATAAGTTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMSLFRP*RISFPL
Trigger: AAGAGGAAAACTTATCCTTCAGGGCCTAAACAAGGA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACGGTTATTATAGAGCTTaGGCATTATGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDGYYRA*ALCAEL
Trigger: GAGCTCTGCACATAATGCTCAAGCTCTATAATAACC...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGCAATGTGAATATCCCTaGCATCCGAAAGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMQCEYP*HPKESG
Trigger: TCCAGATTCTTTCGGATGTCAGGGATATTCACATTG...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACTTCACTCGCAATACTTaGAGCTTGTACGGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNFTRNT*SLYGRP
Trigger: TGGACGACCGTACAAGCTGCAAGTATTGCGAGTGAA...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGCCCTCCCAATATCATaGCATCTGCCCCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWALPIS*HLPLSL
Trigger: GAGTGAAAGGGGCAGATGGCATGATATTGGGAGGGC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCGGCTACTGGTTTCCATaGTGGACTGTTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLGYWFP*WTVQRP
Trigger: TGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCC...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGCAAGGCACAGAGACCTaGTTCATTACACAAGACTTT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMQGTET*FITQDF
Trigger: AAAGTCTTGTGTAATGAAGCAGGTCTCTGTGCCTTG...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGATTCTGGTCCCAGCTaGTTCATTACACAAGACTTT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMDSGPS*FITQDF
Trigger: AAAGTCTTGTGTAATGAAGCAGCTGGGACCAGAATC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACTTCGAAGCAGTTTCTaGAGAATATCTAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLLRSSF*RISSRS
Trigger: GGACCGGCTAGATATTCTCCAGAAACTGCTTCGAAG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAGAAATCGCTTCATaGGATGAACAGACTAGGTCG +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMKEIAS*DEQTRS
Trigger: CGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGTCACTTCATGTTATATaGGCTGAAGGCTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMSLHVI*AEGFEW
Trigger: CCACTCAAAGCCTTCAGCCCATATAACATGAAGTGA...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CAA 72 bp TCACCCACCCTAAGATATGAAACATTACTGACACAATaGAAGCAGCTCAACTTTTCTCCCCTGAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SPTLRYETLLTQ*KQLNFSPLRKF
Trigger: GAATTTCCTCAGGGGAGAAAAGTTGAGCTGCTTCAATTGTGTCAGTAATGTTTCATATCTTAGGGTGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCTCATGGCACTGGGTCTaGTATCATTCATTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLSWHWV*YHSLPA
Trigger: TGCAGGCAATGAATGATATCAGACCCAGTGCCATGA...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAATTTCTGTTAAGAGCTaGGCCAAAACACGATCGGCT +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKISVKS*AKTRSA
Trigger: AGCCGATCGTGTTTTGGCTCAGCTCTTAACAGAAAT...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAACAGTGCTCAAGGCCTaGGTGAAATGTCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKTVLKA*VKCLFM
Trigger: CATGAAAAGACATTTCACTCAGGCCTTGAGCACTGT...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGAGAGAACCTTCTGAATaGTGGGAATGTTTTCTACTC +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMREPSE*WECFLL
Trigger: GAGTAGAAAACATTCCCATCATTCAGAAGGTTCTCT...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACAAGACTTTCAAGTCTaGTCCAACGTATCCATGAGC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLQDFQV*SNVSMS
Trigger: GCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGATTTGGGACATCAATTaGTATTTCCCTCATGGCACT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMIWDIN*YFPHGT
Trigger: AGTGCCATGAGGGAAATAGCAATTGATGTCCCAAAT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACTGGACGGTTAGTAGCTaGCAAAATGGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNWTVSS*QNGHIL
Trigger: AAGGATGTGACCATTTTGGCAGCTACTAACCGTCCA...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTATGGACGGTTAGTAGCTaGCAAAATGGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLWTVSS*QNGHIL
Trigger: AAGGATGTGACCATTTTGGCAGCTACTAACCGTCCA...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGCTTTCTATTCTTCTTaGAAGACATGGTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPAFYSS*KTWSQG
Trigger: ACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGCTTTCTATTCTTCTTaGAAGACATGGTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMAFYSS*KTWSQG
Trigger: ACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACCATTTTCCGCGCTTTaGTTCAACCGCTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLPFSAL*FNRFLF
Trigger: GAATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTATCAAAGGCCATTCTTTaGGCATCAGTGTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLSKAIL*ASVSES
Trigger: TGACTCTGACACTGATGCCCAAAGAATGGCCTTTGA...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCTCCTTGTGGTCTTCCTaGCCAGCAGGAGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLSLWSS*PAGDFS
Trigger: AGAAAAATCTCCTGCTGGCCAGGAAGACCACAAGGA...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAACTTTGCTCCTATGCTaGACTTTAGCAGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLTLLLC*TLAVSL
Trigger: AAGAGAGACTGCTAAAGTTCAGCATAGGAGCAAAGT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGTTCCAACTTCAGTTTaGTACTTTCCAGTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLVPTSV*YFPVLL
Trigger: TAGGAGGACTGGAAAGTATCAAACTGAAGTTGGAAC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGAATACCCATTCGAATaGAAGACTCTGGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMEYPFE*KTLDVL
Trigger: TAAAACATCCAGAGTCTTTCATTCGAATGGGTATTC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGAATACCCATTCGAATaGAAGACTCTGGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPEYPFE*KTLDVL
Trigger: TAAAACATCCAGAGTCTTTCATTCGAATGGGTATTC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACGTAAAGGCACATAGATaGTTCTATCAATTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDVKAHR*FYQFFQ
Trigger: CTGGAAGAATTGATAGAATCATCTATGTGCCTTTAC...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGTAAAGGCACATAGATaGTTCTATCAATTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPVKAHR*FYQFFQ
Trigger: CTGGAAGAATTGATAGAATCATCTATGTGCCTTTAC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCTGACAGGCATGGAGTaGAACTGCAGCTTAAATATT +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNLTGME*NCSLNI
Trigger: AATATTTAAGCTGCAGTTTCACTCCATGCCTGTCAG...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGCCAGGTAAAACTGATTaGAACTTATGCTCAGAGATA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMPGKTD*NLCSEI
Trigger: TATCTCTGAGCATAAGTTTCAATCAGTTTTACCTGG...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGTCTTTTCGGACAAAGTaGATCCAGCTCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMSFRTK*IQLINK
Trigger: TTTATTGATGAGCTGGATGCACTTTGTCCGAAAAGA...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTCTTTTCGGACAAAGTaGATCCAGCTCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMSFRTK*IQLINK
Trigger: TTTATTGATGAGCTGGATGCACTTTGTCCGAAAAGA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACTTACTTCTGAACCAATaGCATCCATCAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDLLLNQ*HPSVLR
Trigger: TCTTAACACTGATGGATGGCATTGGTTCAGAAGTAA...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTCTGATATCATTCATTaGCTGCAAGAAATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMSDIIH*LQEILQ
Trigger: CTGAAGGATTTCTTGCAGGCAATGAATGATATCAGA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCATAACTCCAGGCTACTaGTTTCCATGCTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLITPGY*FPCWTV
Trigger: AACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTAT...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACTCCTCCAGATCTAACTaGCTTAGCTGTAAGGATAAC +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNSSRSN*LSCKDN
Trigger: GTTATCCTTACAGCTAAGCCAGTTAGATCTGGAGGA...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCATGGGTGTCGTAGAGTaGCTTCAGCAAATATCTGAC +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLMGVVE*LQQISD
Trigger: GTCAGATATTTGCTGAAGCCACTCTACGACACCCAT...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCCTTGTCTATCCTATCTaGACGGTTAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLLVYPI*TVSSCQ
Trigger: TTGGCAGCTACTAACCGTCCAGATAGGATAGACAAG...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGGCCATTTTACTGGCTaGCCTTCAAAAATAAAGATT +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPGHFTG*PSKIKI
Trigger: AATCTTTATTTTTGAAGGCCAGCCAGTAAAATGGCC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAATTGGGCCATTTTACTaGCTGGCCTTCAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPIGPFY*LAFKNK
Trigger: TTTATTTTTGAAGGCCAGCCAGTAAAATGGCCCAAT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACTCTTTGTCCCCTAGGTaGGTTTATGTACTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNSLSPR*VYVLVN
Trigger: GTTTACCAGTACATAAACCCACCTAGGGGACAAAGA...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAATCATTCTAAAGCCATaGGCAGGTAAGCTCATAGTC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLIILKP*AGKLIV
Trigger: GACTATGAGCTTACCTGCCCATGGCTTTAGAATGAT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGTGTTGAGTCCAAGATaGATAAGGGAATTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLVLSPR*IREFWN
Trigger: ATTCCAGAATTCCCTTATTCATCTTGGACTCAACAC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAAAGCTCAGGCTGTTTaGGGGGCAATTCAATTATTT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLKAQAV*GAIQLF
Trigger: AAATAATTGAATTGCCCCTCAAACAGCCTGAGCTTT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR TCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCACTCCTTTAGGTGGCTaGATACCCATTCGAATGAAA +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLTPLGG*IPIRMK
Trigger: TTTCATTCGAATGGGTATTCAGCCACCTAAAGGAGT...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGTCAACTTTTCTCCCCTaGGGAAATTCCTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWSTFLP*GNSSPV
Trigger: TACTGGTGAGGAATTTCCTCAGGGGAGAAAAGTTGA...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAAAGACATGTCAATGTaGATATCCCTGACATCCGAA +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLKDMSM*ISLTSE
Trigger: TTCGGATGTCAGGGATATTCACATTGACATGTCTTT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAATATCATTCATTGCCTaGAAGAAATCCTTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPISFIA*KKSFRV
Trigger: TACTCTGAAGGATTTCTTGCAGGCAATGAATGATAT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAATTTGGGACATCAATTaGTATTTCCCTCATGGCACT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLIWDIN*YFPHGT
Trigger: AGTGCCATGAGGGAAATAGCAATTGATGTCCCAAAT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAGTGATCAAGTTTAAGTaGACATTCTTCCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKVIKFK*TFFPLP
Trigger: TGGCAATGGGAAGAATGTGCACTTAAACTTGATCAC...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAGTGGGCACTGTGGATTaGATTGTAAATTCATGGAAT +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKVGTVD*IVNSWN
Trigger: ATTCCATGAATTTACAATGCAATCCACAGTGCCCAC...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAACTAGTAAGCAACACTaGTCGACCTATACATATATT +
Preference number: 4 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPTSKQH*STYTYI
Trigger: AATATATGTATAGGTCGACCAGTGTTGCTTACTAGT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGCTTGATGTTGGGATCTaGGTATCCTCCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWLDVGI*VSSRSN
Trigger: GTTAGATCTGGAGGATACCCAGATCCCAACATCAAG...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACGCTCATTTCCTTCTCTaGCAGATTCAAAATTACATT +
Preference number: 4 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDAHFLL*QIQNYI
Trigger: AATGTAATTTTGAATCTGCCAGAGAAGGAAATGAGC...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGCTCATTTCCTTCTCTaGCAGATTCAAAATTACATT +
Preference number: 4 (lower is better)
Translates to: QILEKEIASWDEQTRSQMAHFLL*QIQNYI
Trigger: AATGTAATTTTGAATCTGCCAGAGAAGGAAATGAGC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACTAATTGCTTTCAGCTaGCTACTTAATCCTCCTATC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLLIAFS*LLNPPI
Trigger: GATAGGAGGATTAAGTAGCCAGCTGAAAGCAATTAG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAAGAACTCCTTTAGGTaGCTGAATACCCATTCGAAT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLKNSFR*LNTHSN
Trigger: ATTCGAATGGGTATTCAGCCACCTAAAGGAGTTCTT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGTCAGTCCACTCTCATTaGCCAAAGCCTTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWSVHSH*PKPLLS
Trigger: TGATAGCAAAGGCTTTGGCCAATGAGAGTGGACTGA...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
3UTR CAA 72 bp ATTTTTCTTTTCTTGTCTACCCTTGTGCTGAGAGTGTaGGTTATTATAGAGCTTGAGCATTATGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IFLFLSTLVLRV*VIIELEHYVQS
Trigger: GCTCTGCACATAATGCTCAAGCTCTATAATAACCAACACTCTCAGCACAAGGGTAGACAAGAAAAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGATAAGGAGTACTTCTTaGTGTTGGGATCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWIRSTS*CWDLGI
Trigger: GATACCCAGATCCCAACATCAAGAAGTACTCCTTAT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGCTTCAGCAAATATCTaGCGTAACTTTGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWASANI*RNFASV
Trigger: GACTGAAGCAAAGTTACGTCAGATATTTGCTGAAGC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAGTGGTTATTGTATTTaGCAACACAGTTCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLSGYCI*QHSSKW
Trigger: CCACTTAGAACTGTGTTGTCAAATACAATAACCACT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACTGGTAAAACAATCTTaGCATCTAGTTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKLVKQS*HLVFSG
Trigger: TCCTGAGAAAACTAGATGGCAAGATTGTTTTACCAG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACTGGTAAAACAATCTTaGCATCTAGTTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLLVKQS*HLVFSG
Trigger: TCCTGAGAAAACTAGATGGCAAGATTGTTTTACCAG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACTTTGCAGGACTACAGTaGTATGGAAATAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNFAGLQ*YGNRCL
Trigger: AAGACATCTATTTCCATAGCACTGTAGTCCTGCAAA...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACATAATATCAAAGGATaGTTTGGTGTGTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKHNIKG*FGVCSS
Trigger: AGATGAGCACACACCAAAGCATCCTTTGATATTATG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCAGTTGCCTTCCAAAGTaGTTGTACCAATTTATGCTC +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLSCLPK*LYQFML
Trigger: GAGCATAAATTGGTACAACCACTTTGGAAGGCAACT...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACACATCCGAAAGAATCTaGATCAAAGGCAAACTTTCA +
Preference number: 4 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNTSERI*IKGKLS
Trigger: TGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGTGTTGAGTCCAAGATaGATAAGGGAATTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWVLSPR*IREFWN
Trigger: ATTCCAGAATTCCCTTATTCATCTTGGACTCAACAC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR TCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGAAAGCTCAGGCTGTTTaGGGGGCAATTCAATTATTT +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWKAQAV*GAIQLF
Trigger: AAATAATTGAATTGCCCCTCAAACAGCCTGAGCTTT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTATACAATACAGAAAGTTaGCTGGTAAAACAATCTTGC +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLYNTES*LVKQSC
Trigger: GCAAGATTGTTTTACCAGGCAACTTTCTGTATTGTA...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CCA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACACTCAAACAGATTCTaGAAAAAGAAATCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLHSNRF*KKKSLH
Trigger: ATGAAGCGATTTCTTTTTCCAGAATCTGTTTGAGTG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR GCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCTACAATACAGAAAGTTaGCTGGTAAAACAATCTTGC +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLYNTES*LVKQSC
Trigger: GCAAGATTGTTTTACCAGGCAACTTTCTGTATTGTA...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCCACTCAAACAGATTCTaGAAAAAGAAATCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLHSNRF*KKKSLH
Trigger: ATGAAGCGATTTCTTTTTCCAGAATCTGTTTGAGTG...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGGGCCATTTTACTGGCTaGCCTTCAAAAATAAAGATT +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWGHFTG*PSKIKI
Trigger: AATCTTTATTTTTGAAGGCCAGCCAGTAAAATGGCC...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CCA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCGCTGAAGGCTTTGAGTaGCTATTAATATCTAAACTT +
Preference number: 4 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLAEGFE*LLISKL
Trigger: AAGTTTAGATATTAATAGCCACTCAAAGCCTTCAGC...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR GCA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGATATCATTCATTGCCTaGAAGAAATCCTTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWISFIA*KKSFRV
Trigger: TACTCTGAAGGATTTCTTGCAGGCAATGAATGATAT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS CCA 90 bp GCCACATCCATTTCCTCAGCCTGTAGCACAGCACCCACAAGAGGCTaGACCTGGATGGCATCACCAGGCCTCACACCCACATTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: ATSISSACSTAPTRG*TWMASPGLTPTFFC
Trigger: ACAGAAAAATGTGGGTGTGAGGCCTGGTGATGCCATCCAGGTCCAGCCTCTTGTGGGTGCTGTGCTACAGGCTGAGGAAATGGATGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CCA 90 bp TCCATTTCCTCAGCCTGTAGCACAGCACCCACAAGAGGCTGGACCTaGATGGCATCACCAGGCCTCACACCCACATTTTTCTGTGCCATT +
Preference number: 5 (lower is better)
Translates to: SISSACSTAPTRGWT*MASPGLTPTFFCAI
Trigger: AATGGCACAGAAAAATGTGGGTGTGAGGCCTGGTGATGCCATCCAGGTCCAGCCTCTTGTGGGTGCTGTGCTACAGGCTGAGGAAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS TCA 90 bp TTTTCAGGATTCTCCGCAAGGCACAGAGACCTTGAGGGGTTTGGGTaGGGCCCGTGGCAAAGGCAGAGACATACATATGCGCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: FSGFSARHRDLEGFG*GPWQRQRHTYAPLG
Trigger: TCCTAAAGGCGCATATGTATGTCTCTGCCTTTGCCACGGGCCTCACCCAAACCCCTCAAGGTCTCTGTGCCTTGCGGAGAATCCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS CCA 90 bp GCCCAGGTCTTCGGAGAGCAGCATCCAAGGCATGAGGGCGATTTGTaGCCCCAAGAACCAACACTTGTCCTTCACTTACTTCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: AQVFGEQHPRHEGDL*PQEPTLVLHLLLNQ
Trigger: TTGGTTCAGAAGTAAGTGAAGGACAAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGCTCTCCGAAGACCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGAGCCTGGCTGGCACATaGGGCCATTTTACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLSLAGT*GHFTGW
Trigger: CCAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS GCA 90 bp TTTGGGCATCAGTGTCAGAGTCACTCTGAGGCCCTCCCAATATCATaGCATCTGCCCCTTTCACTCGCAATACTTGCAGCTTGTACGGTC +
Preference number: 5 (lower is better)
Translates to: FGHQCQSHSEALPIS*HLPLSLAILAACTV
Trigger: GACCGTACAAGCTGCAAGTATTGCGAGTGAAAGGGGCAGATGGCATGATATTGGGAGGGCCTCAGAGTGACTCTGACACTGATGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS TCA 90 bp GACTGTTCAAAGGCCATTCTTTGGGCATCAGTGTCAGAGTCACTCTaGGGCCCTCCCAATATCATGCCATCTGCCCCTTTCACTCGCAAT +
Preference number: 5 (lower is better)
Translates to: DCSKAILWASVSESL*GPPNIMPSAPFTRN
Trigger: ATTGCGAGTGAAAGGGGCAGATGGCATGATATTGGGAGGGCCTCAGAGTGACTCTGACACTGATGCCCAAAGAATGGCCTTTGAACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS TCA 90 bp TCTTTATCAAATCGCCCAGGTCTTCGGAGAGCAGCATCCAAGGCATaGGGGCGATTTGTGGCCCCAAGAACCAACACTTGTCCTTCACTT +
Preference number: 5 (lower is better)
Translates to: SLSNRPGLRRAASKA*GRFVAPRTNTCPSL
Trigger: AAGTGAAGGACAAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGCTCTCCGAAGACCTGGGCGATTTGATAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS GCA 90 bp TTTCTGTGCCATTTCACTCAGGCCGACCTTGCCTCCAGGAAATCCTaGCATAGGCCAGGCTGTATACACCTCTTGCTTTCCGTTCAAACT +
Preference number: 5 (lower is better)
Translates to: FLCHFTQADLASRKS*HRPGCIHLLLSVQT
Trigger: AGTTTGAACGGAAAGCAAGAGGTGTATACAGCCTGGCCTATGGCAGGATTTCCTGGAGGCAAGGTCGGCCTGAGTGAAATGGCACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS GCA 90 bp ACACAAGACTTTCAAGTCTGCTCCAACGTATCCATGAGCACTATTTaGCAGCTGCAGCAGCTCAGCCTCAGTGAGCAAATGGGGTACCCT +
Preference number: 5 (lower is better)
Translates to: TQDFQVCSNVSMSTI*QLQQLSLSEQMGYP
Trigger: AGGGTACCCCATTTGCTCACTGAGGCTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS GCA 90 bp CCGCAAGGCACAGAGACCTGCTTCATTACACAAGACTTTCAAGTCTaGTCCAACGTATCCATGAGCACTATTTGCCAGCTGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: PQGTETCFITQDFQV*SNVSMSTICQLQQL
Trigger: GAGCTGCTGCAGCTGGCAAATAGTGCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTGTGTAATGAAGCAGGTCTCTGTGCCTTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCAGCCCTGGCGATCATaGTTTTTCCAGTACCTGGAG +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLQPWRS*FFQYLE
Trigger: CTCCAGGTACTGGAAAAACAATGATCGCCAGGGCTG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGATCCATGAGCACTATTaGCCAGCTGCAGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLIHEHY*PAAAAQ
Trigger: CTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGAT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS TCA 90 bp CGTATCCATGAGCACTATTTGCCAGCTGCAGCAGCTCAGCCTCAGTaGGCAAATGGGGTACCCTTCGAAGCAGTTTCTGGAGAATATCTA +
Preference number: 5 (lower is better)
Translates to: RIHEHYLPAAAAQPQ*ANGVPFEAVSGEYL
Trigger: TAGATATTCTCCAGAAACTGCTTCGAAGGGTACCCCATTTGCTCACTGAGGCTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CCA 90 bp CAAGAGGAAGCAGCAGAGGGCAAGGACGAACCATTTTCCGCGCTTTaGTTCAACCGCTTTCTATTCTTCTTGGAAGACATGGTCACAAGG +
Preference number: 5 (lower is better)
Translates to: QEEAAEGKDEPFSAL*FNRFLFFLEDMVTR
Trigger: CCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGTTCGTCCTTGCCCTCTGCTGCTTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS-3UTR CAA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTCAGAGTCCCGGAGGTaGCCGCGAAGTCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: QILEKEIASWDEQTRSQMSESRR*PRSLIQ
Trigger: CTGGATCAGACTTCGCGGCAACCTCCGGGACTCTGA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATCACTCAGGCCGACCTaGCCTCCAGGAAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPSLRPT*PPGNPA
Trigger: GGCAGGATTTCCTGGAGGCAAGGTCGGCCTGAGTGA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTTTCACTCGCAATACTaGCAGCTTGTACGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLFHSQY*QLVRSS
Trigger: GGACGACCGTACAAGCTGCAAGTATTGCGAGTGAAA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS TCA 90 bp CCTGCTTCATTACACAAGACTTTCAAGTCTGCTCCAACGTATCCATaGGCACTATTTGCCAGCTGCAGCAGCTCAGCCTCAGTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: PASLHKTFKSAPTYP*ALFASCSSSASVSK
Trigger: TTTGCTCACTGAGGCTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTGTGTAATGAAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
CDS TCA 90 bp GCTGCTTCATTACACAAGACTTTCAAGTCTGCTCCAACGTATCCATaGGCACTATTTGCCAGCTGCAGCAGCTCAGCCTCAGTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: AASLHKTFKSAPTYP*ALFASCSSSASVSK
Trigger: TTTGCTCACTGAGGCTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTGTGTAATGAAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS CCA 90 bp ACTGGCTTAGCTGTAAGGATAACTCCAGGCTACTGGTTTCCATGCTaGACTGTTCAAAGGCCATTCTTTGGGCATCAGTGTCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: TGLAVRITPGYWFPC*TVQRPFFGHQCQSH
Trigger: GTGACTCTGACACTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTATCCTTACAGCTAAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CCA 90 bp CCTCCAGATCTAACTGGCTTAGCTGTAAGGATAACTCCAGGCTACTaGTTTCCATGCTGGACTGTTCAAAGGCCATTCTTTGGGCATCAG +
Preference number: 5 (lower is better)
Translates to: PPDLTGLAVRITPGY*FPCWTVQRPFFGHQ
Trigger: CTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTATCCTTACAGCTAAGCCAGTTAGATCTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS-3UTR CAA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAGCCTGGCTGGCACATaGGGCCATTTTACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: QILEKEIASWDEQTRSQMSLAGT*GHFTGW
Trigger: CCAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGTCCTTTTCTAATAAGTaGGTCACCGTCAGAGTCCCG +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLSFSNK*VTVRVP
Trigger: CGGGACTCTGACGGTGACCAACTTATTAGAAAAGGA...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS TCA 90 bp TGGGGTACCCTTCGAAGCAGTTTCTGGAGAATATCTAGCCGGTCCTaGGCATTGGGAACTCCAATCTCAATCTCTTTATCAAATCGCCCA +
Preference number: 5 (lower is better)
Translates to: WGTLRSSFWRISSRS*ALGTPISISLSNRP
Trigger: TGGGCGATTTGATAAAGAGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGCTAGATATTCTCCAGAAACTGCTTCGAAGGGTACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS TCA 90 bp TCTCTGCAGACAGCTACAATCTCTGCTCCTGAGTATGCGTCGGTTTaGAGGATGAGTTCATCCAGGTCAACTTCATTACTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: SLQTATISAPEYASV*RMSSSRSTSLLTGM
Trigger: CATGCCTGTCAGTAATGAAGTTGACCTGGATGAACTCATCCTTCAAACCGACGCATACTCAGGAGCAGAGATTGTAGCTGTCTGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS GCA 90 bp CTAACTGGCTTAGCTGTAAGGATAACTCCAGGCTACTGGTTTCCATaGTGGACTGTTCAAAGGCCATTCTTTGGGCATCAGTGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: LTGLAVRITPGYWFP*WTVQRPFFGHQCQS
Trigger: ACTCTGACACTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTATCCTTACAGCTAAGCCAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CCA 90 bp TTTCCGCGCTTTGGTTCAACCGCTTTCTATTCTTCTTGGAAGACATaGTCACAAGGTACCCTAGCCGAAGCAGTAGAAAAGCCGACTCAA +
Preference number: 5 (lower is better)
Translates to: FPRFGSTAFYSSWKT*SQGTLAEAVEKPTQ
Trigger: TTGAGTCGGCTTTTCTACTGCTTCGGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274008.5
ENST00000674886.1
ENST00000675612.1
CDS CCA 90 bp GGAGTACTTCTTGATGTTGGGATCTGGGTATCCTCCAGATCTAACTaGCTTAGCTGTAAGGATAACTCCAGGCTACTGGTTTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: GVLLDVGIWVSSRSN*LSCKDNSRLLVSML
Trigger: CAGCATGGAAACCAGTAGCCTGGAGTTATCCTTACAGCTAAGCCAGTTAGATCTGGAGGATACCCAGATCCCAACATCAAGAAGTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CCA 90 bp CCCTTCGAAGCAGTTTCTGGAGAATATCTAGCCGGTCCTGAGCATTaGGAACTCCAATCTCAATCTCTTTATCAAATCGCCCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PFEAVSGEYLAGPEH*ELQSQSLYQIAQVF
Trigger: GAAGACCTGGGCGATTTGATAAAGAGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGCTAGATATTCTCCAGAAACTGCTTCGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS-3UTR CAA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACAGGCATGAGGGCGATTaGTGGCCCCAAGAACCAACA +
Preference number: 5 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDRHEGD*WPQEPT
Trigger: TGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCT...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAAGGCATGAGGGCGATTaGTGGCCCCAAGAACCAACA +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPRHEGD*WPQEPT
Trigger: TGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGAAGGCGCCACTGCTCTaGCTTTTCGGAAGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMKAPLL*LFGRSL
Trigger: GAGAGACCTTCCGAAAAGCAAGAGCAGTGGCGCCTT...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAGGCGCCACTGCTCTaGCTTTTCGGAAGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: QILEKEIASWDEQTRSQMKAPLL*LFGRSL
Trigger: GAGAGACCTTCCGAAAAGCAAGAGCAGTGGCGCCTT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGGGCCGCATCAAAGCCTaGTCTATCCTATCTGGACGG +
Preference number: 5 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMGRIKA*SILSGR
Trigger: CCGTCCAGATAGGATAGACAAGGCTTTGATGCGGCC...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGCATGATGAGATTGGCTaGAATGTCTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLHDEIG*NVFFQS
Trigger: GCTCTGGAAGAAGACATTCAAGCCAATCTCATCATG...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGAGACCTTGAGGGGTTaGGGTGAGGCCCGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLETLRG*GEARGK
Trigger: TTTGCCACGGGCCTCACCCAAACCCCTCAAGGTCTC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS GCA 90 bp CAGTCTGCGCAACAAAGCAAGACCTCGTCTATTTGGGACATCAATTaGTATTTCCCTCATGGCACTGGGTCTGATATCATTCATTGCCTG +
Preference number: 5 (lower is better)
Translates to: QSAQQSKTSSIWDIN*YFPHGTGSDIIHCL
Trigger: CAGGCAATGAATGATATCAGACCCAGTGCCATGAGGGAAATAGCAATTGATGTCCCAAATAGACGAGGTCTTGCTTTGTTGCGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674886.1
CDS CCA 90 bp ACGAACCATTTTCCGCGCTTTGGTTCAACCGCTTTCTATTCTTCTTaGAAGACATGGTCACAAGGTACCCTAGCCGAAGCAGTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: TNHFPRFGSTAFYSS*KTWSQGTLAEAVEK
Trigger: CTTTTCTACTGCTTCGGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGATGTGCAGAGCTCAGTaGTCACTTCATGTTATATGG +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLMCRAQ*SLHVIW
Trigger: CCATATAACATGAAGTGACAACTGAGCTCTGCACAT...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS TCA 90 bp GTCACATCCTTTAGCTGTTCAATCCCATCCATTTCTGTTAAGAGCTaGGCCAAAACACGATCGGCTACATTCCCAGCACCTAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: VTSFSCSIPSISVKS*AKTRSATFPAPKEL
Trigger: CAGTTCTTTAGGTGCTGGGAATGTAGCCGATCGTGTTTTGGCTCAGCTCTTAACAGAAATGGATGGGATTGAACAGCTAAAGGATGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000675612.1
CDS GCA 90 bp ATTGCTATTTCCCTCATGGCACTGGGTCTGATATCATTCATTGCCTaGAAGAAATCCTTCAGAGTAATCTTCACCAGTCCAGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: IAISLMALGLISFIA*KKSFRVIFTSPATL
Trigger: CAAGGTGGCTGGACTGGTGAAGATTACTCTGAAGGATTTCTTGCAGGCAATGAATGATATCAGACCCAGTGCCATGAGGGAAATAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS-3UTR CAA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGTCACTCAGGCCGACCTaGCCTCCAGGAAATCCTGCC +
Preference number: 5 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWSLRPT*PPGNPA
Trigger: GGCAGGATTTCCTGGAGGCAAGGTCGGCCTGAGTGA...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGGCCGCATCAAAGCCTaGTCTATCCTATCTGGACGG +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLGRIKA*SILSGR
Trigger: CCGTCCAGATAGGATAGACAAGGCTTTGATGCGGCC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACAGTCAGAAAGCCTCCTaGTGGTCTTCCTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNSQKAS*WSSWPA
Trigger: TGCTGGCCAGGAAGACCACAAGGAGGCTTTCTGACT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACACCTTTTCTAATAAGTaGGTCACCGTCAGAGTCCCG +
Preference number: 5 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDTFSNK*VTVRVP
Trigger: CGGGACTCTGACGGTGACCAACTTATTAGAAAAGGT...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp TTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTTTACTGGCTGGTACAATACAGAAAGTaGCCTGGTAAAACAATCTTG +
Preference number: 5 (lower is better)
Translates to: LKTRPHKPGWHIGPFYWLVQYRK*PGKTIL
Trigger: CAAGATTGTTTTACCAGGCAACTTTCTGTATTGTAC...CAGCCAGTAAAATGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTCAAAGGCCATTCTTaGGGCATCAGTGTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPFKGHS*GISVRV
Trigger: GACTCTGACACTGATGCCCAAAGAATGGCCTTTGAA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGGAGTACTTCTTGATGTaGGGATCTGGGTATCCTCCA +
Preference number: 5 (lower is better)
Translates to: QILEKEIASWDEQTRSQMEYFLM*GSGYPP
Trigger: TGGAGGATACCCAGATCCCAACATCAAGAAGTACTC...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGAGTACTTCTTGATGTaGGGATCTGGGTATCCTCCA +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPEYFLM*GSGYPP
Trigger: TGGAGGATACCCAGATCCCAACATCAAGAAGTACTC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACAGCCCTGGCGATCATaGTTTTTCCAGTACCTGGAG +
Preference number: 5 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKQPWRS*FFQYLE
Trigger: CTCCAGGTACTGGAAAAACAATGATCGCCAGGGCTG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAAATCCATGAGCACTATTaGCCAGCTGCAGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKIHEHY*PAAAAQ
Trigger: CTGAGCTGCTGCAGCTGGCAAATAGTGCTCATGGAT...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTCAGTCCACTCTCATaGGCCAAAGCCTTTGCTATC +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPFSPLS*AKAFAI
Trigger: GATAGCAAAGGCTTTGGCCAATGAGAGTGGACTGAA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS TCA 90 bp ATGCAGCCCACTCTTCTCTTGATAATCTTCATAAAAACGTCTCAATaGCTCAGGAATTCTAGGTGTCACAGTGCTCAAGGCCTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: MQPTLLLIIFIKTSQ*LRNSRCHSAQGLSE
Trigger: TTCACTCAGGCCTTGAGCACTGTGACACCTAGAATTCCTGAGTCATTGAGACGTTTTTATGAAGATTATCAAGAGAAGAGTGGGCTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS GCA 90 bp CCTGAGTTTCCTGAGTCAAGCCATTCCCGTAATTACCTGCTTCAGTaGAAAGAGATGGGTACACAGTTACATTTCCTAAGAAGTTTTACC +
Preference number: 5 (lower is better)
Translates to: PEFPESSHSRNYLLQ*KEMGTQLHFLRSFT
Trigger: GGTAAAACTTCTTAGGAAATGTAACTGTGTACCCATCTCTTTGCACTGAAGCAGGTAATTACGGGAATGGCTTGACTCAGGAAACTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675392.1
CDS-3UTR CAA 90 bp AAGGATGCTTTGGTGTGTGCTCATCTTCAAAGGAAGCATTCAGGAAAACATGACACCATTTTCCGCGCTTaGGTTCAACCGCTTTCTATT +
Preference number: 5 (lower is better)
Translates to: KDALVCAHLQRKHSGKHDTIFRA*VQPLSI
Trigger: AATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGT...GTCATGTTTTCCTGAATGCTTCCTTTGAAGATGAGCACACACCAAAGCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTATTTCACTCGCAATACTaGCAGCTTGTACGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLFHSQY*QLVRSS
Trigger: GGACGACCGTACAAGCTGCAAGTATTGCGAGTGAAA...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAGTCAGGAGGATCACTaGAGCTCCAGGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLSQEDH*SSRSLK
Trigger: CTTCAAACTCCTGGAGCTCAAGTGATCCTCCTGACT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS CCA 90 bp GGCTGTATACACCTCTTGCTTTCCGTTCAAACTAGTAAGCAACACTaGTCGACCTATACATATATTTGCAGACTTCATAGTGTTGAGTCC +
Preference number: 5 (lower is better)
Translates to: GCIHLLLSVQTSKQH*STYTYICRLHSVES
Trigger: GGACTCAACACTATGAAGTCTGCAAATATATGTATAGGTCGACCAGTGTTGCTTACTAGTTTGAACGGAAAGCAAGAGGTGTATACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCACCTGGTAAAACAATCTaGCCATCTAGTTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPPGKTI*PSSFLR
Trigger: CCTGAGAAAACTAGATGGCAAGATTGTTTTACCAGG...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTATTCAAAGGCCATTCTTaGGGCATCAGTGTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLFKGHS*GISVRV
Trigger: GACTCTGACACTGATGCCCAAAGAATGGCCTTTGAA...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCATTCAATATGGAAGTCTaGTTTTCCAGATCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPFNMEV*FSRSAA
Trigger: CGCTGCAGATCTGGAAAACAAGACTTCCATATTGAA...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGCTTGTGCTGAGAGTGTaGGTTATTATAGAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: QILEKEIASWDEQTRSQMLVLRV*VIIELE
Trigger: CTCAAGCTCTATAATAACCAACACTCTCAGCACAAG...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGTGTGGGCACTGTGGATaGCATTGTAAATTCATGGAA +
Preference number: 5 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMCGHCG*HCKFME
Trigger: TTCCATGAATTTACAATGCAATCCACAGTGCCCACA...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS GCA 90 bp CTTGCAGCTTGTACGGTCGTCCATAGAATGTACAATACAGAAAGTTaGCTGGTAAAACAATCTTGCCATCTAGTTTTCTCAGGATACAAC +
Preference number: 5 (lower is better)
Translates to: LAACTVVHRMYNTES*LVKQSCHLVFSGYN
Trigger: GTTGTATCCTGAGAAAACTAGATGGCAAGATTGTTTTACCAGGCAACTTTCTGTATTGTACATTCTATGGACGACCGTACAAGCTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAACCATTTTCCGCGCTTaGGTTCAACCGCTTTCTATT +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLTIFRA*VQPLSI
Trigger: AATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACGGCTGTATACACCTCTaGCTTTCCGTTCAAACTAGT +
Preference number: 5 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNGCIHL*LSVQTS
Trigger: ACTAGTTTGAACGGAAAGCAAGAGGTGTATACAGCC...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGTTAATTTCCATATCTTaGTCACTCAGTGCCACATCC +
Preference number: 5 (lower is better)
Translates to: QILEKEIASWDEQTRSQMLISIS*SLSATS
Trigger: GGATGTGGCACTGAGTGACAAAGATATGGAAATTAA...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp AGCCTCCTGCACCAGAGTCATTTCAAGCTTCTGGTTTTTATTCTATTGGGAATGATATCTGACGTAACTTaGCTTCAGTCTCACCATAGA +
Preference number: 5 (lower is better)
Translates to: SLLHQSHFKLLVFILLGMISDVT*LQSHHR
Trigger: TCTATGGTGAGACTGAAGCAAAGTTACGTCAGATAT...CATTCCCAATAGAATAAAAACCAGAAGCTTGAAATGACTCTGGTGCAGGAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp CAGATTCTGGAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGATATCTGACGTAACTTaGCTTCAGTCTCACCATAGA +
Preference number: 5 (lower is better)
Translates to: QILEKEIASWDEQTRSQMISDVT*LQSHHR
Trigger: TCTATGGTGAGACTGAAGCAAAGTTACGTCAGATAT...CATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTCCAGAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp ACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACCAAACAGATGCCAAAACATTTGGGACATCAATaGCTATTTCCCTCATGGCAC +
Preference number: 5 (lower is better)
Translates to: TSERIWIKGKLSTKQMPKHLGHQ*LFPSWH
Trigger: GTGCCATGAGGGAAATAGCAATTGATGTCCCAAATG...TTTTGGCATCTGTTTGGTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACATTTGGGACATCAATaGCTATTTCCCTCATGGCAC +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLHLGHQ*LFPSWH
Trigger: GTGCCATGAGGGAAATAGCAATTGATGTCCCAAATG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCTTCAGTCCACTCTCATaGGCCAAAGCCTTTGCTATC +
Preference number: 5 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLFSPLS*AKAFAI
Trigger: GATAGCAAAGGCTTTGGCCAATGAGAGTGGACTGAA...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTATGCCTTCCAAAGTGGTaGTACCAATTTATGCTCCCA +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLCLPKW*YQFMLP
Trigger: TGGGAGCATAAATTGGTACAACCACTTTGGAAGGCA...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAGGCCATTTTCTTTCCTaGCTGAGCTTAAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPGHFLS*LSLNFP
Trigger: TGGAAAATTTAAGCTCAGCAAGGAAAGAAAATGGCC...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp ATATATGTATATTTGAAAACAAGGCCACATAAGCCTGGCTGGCACATTGGGCCAATATCAAAGGATGCTTaGGTGTGTGCTCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: IYVYLKTRPHKPGWHIGPISKDA*VCAHLQ
Trigger: TTGAAGATGAGCACACACCAAAGCATCCTTTGATAT...TGGCCCAATGTGCCAGCCAGGCTTATGTGGCCTTGTTTTCAAATATACATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCCCTGGTAAAACAATCTaGCCATCTAGTTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLPGKTI*PSSFLR
Trigger: CCTGAGAAAACTAGATGGCAAGATTGTTTTACCAGG...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp AATGTGAATATCCCTGACATCCGAAAGAATCTGGATCAAAGGCAAACTTTCAACAAAAGCTCAGGCTGTTaGAGGGGCAATTCAATTATT +
Preference number: 5 (lower is better)
Translates to: NVNIPDIRKNLDQRQTFNKSSGC*RGNSII
Trigger: AATAATTGAATTGCCCCTCAAACAGCCTGAGCTTTT...GTTGAAAGTTTGCCTTTGATCCAGATTCTTTCGGATGTCAGGGATATTCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAAAAAGCTCAGGCTGTTaGAGGGGCAATTCAATTATT +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLKSSGC*RGNSII
Trigger: AATAATTGAATTGCCCCTCAAACAGCCTGAGCTTTT...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTACTGACCAGGATACATTaGGGACATCAATTGCTATTT +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLLTRIH*GHQLLF
Trigger: AAATAGCAATTGATGTCCCAAATGTATCCTGGTCAG...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS GCA 90 bp TTTGCTCCTATGCTGAACTTTAGCAGTCTCTCTTCTTCAGTAAGTTaGTCATTTCCTTCTCTGGCAGATTCAAAATTACATTTAAGACCT +
Preference number: 5 (lower is better)
Translates to: FAPMLNFSSLSSSVS*SFPSLADSKLHLRP
Trigger: AGGTCTTAAATGTAATTTTGAATCTGCCAGAGAAGGAAATGAGCAACTTACTGAAGAAGAGAGACTGCTAAAGTTCAGCATAGGAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS-3UTR CAA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCTTAATTTCCATATCTTaGTCACTCAGTGCCACATCC +
Preference number: 5 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLLISIS*SLSATS
Trigger: GGATGTGGCACTGAGTGACAAAGATATGGAAATTAA...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp GAAAAAGAAATCGCTTCATGGGATGAACAGACTAGGTCGCAAATGAAAAAGCTAGTACAATACAGAAAGTaGCCTGGTAAAACAATCTTG +
Preference number: 5 (lower is better)
Translates to: EKEIASWDEQTRSQMKKLVQYRK*PGKTIL
Trigger: CAAGATTGTTTTACCAGGCAACTTTCTGTATTGTAC...TAGCTTTTTCATTTGCGACCTAGTCTGTTCATCCCATGAAGCGATTTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS-3UTR CAA 90 bp AGGCTTAGAGTGGGCTTACACTTTCAAAGGGCATTGTATTATACAAAATATCTCCTGACCAGGATACATTaGGGACATCAATTGCTATTT +
Preference number: 5 (lower is better)
Translates to: RLRVGLHFQRALYYTKYLLTRIH*GHQLLF
Trigger: AAATAGCAATTGATGTCCCAAATGTATCCTGGTCAG...GAGATATTTTGTATAATACAATGCCCTTTGAAAGTGTAAGCCCACTCTAAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS TCA 90 bp CGACCTATACATATATTTGCAGACTTCATAGTGTTGAGTCCAAGATaGATAAGGGAATTCTGGAATGTTTTAGGAATTTTGTCATCTACC +
Preference number: 5 (lower is better)
Translates to: RPIHIFADFIVLSPR*IREFWNVLGILSST
Trigger: GGTAGATGACAAAATTCCTAAAACATTCCAGAATTCCCTTATTCATCTTGGACTCAACACTATGAAGTCTGCAAATATATGTATAGGTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000422835.2
CDS TCA 90 bp GTATTTGAATGGTTTATCCCTTCAGTCATTACAGATGACCCAGCATaGCAAGATACTTATTCTAGATCCAATACAGGTAATTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VFEWFIPSVITDDPA*QDTYSRSNTGNCGN
Trigger: ATTTCCACAATTACCTGTATTGGATCTAGAATAAGTATCTTGTCATGCTGGGTCATCTGTAATGACTGAAGGGATAAACCATTCAAATAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675392.1
CDS-3UTR CAA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGACATTACTGACACAATaGAAGCAGCTCAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWTLLTQ*KQLNFS
Trigger: AGAAAAGTTGAGCTGCTTCAATTGTGTCAGTAATGT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS-3UTR CAA 90 bp ACTCTTGTAATACATAAACATGAGACTCTGGGATTAGAAGTAAAACCTTCATGGAGCCTGATCTCTTATTaGCCTTCTTGCATTTTATTC +
Preference number: 5 (lower is better)
Translates to: TLVIHKHETLGLEVKPSWSLISY*PSCILF
Trigger: GAATAAAATGCAAGAAGGCAAATAAGAGATCAGGCT...CCATGAAGGTTTTACTTCTAATCCCAGAGTCTCATGTTTATGTATTACAAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274008.5
CDS TCA 72 bp GGTCACCGTCAGAGTCCCGGAGGTTGCCGCGAAGTCTaGTCCAGCAGAAGGAGCCCGTGCCTCCGCACAAGA +
Preference number: 6 (lower is better)
Translates to: GHRQSPGGCREV*SSRRSPCLRTR
Trigger: TCTTGTGCGGAGGCACGGGCTCCTTCTGCTGGATCAGACTTCGCGGCAACCTCCGGGACTCTGACGGTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 90 bp CATCTACCTTTTCTAATAAGTTGGTCACCGTCAGAGTCCCGGAGGTaGCCGCGAAGTCTGATCCAGCAGAAGGAGCCCGTGCCTCCGCAC +
Preference number: 6 (lower is better)
Translates to: HLPFLISWSPSESRR*PRSLIQQKEPVPPH
Trigger: GTGCGGAGGCACGGGCTCCTTCTGCTGGATCAGACTTCGCGGCAACCTCCGGGACTCTGACGGTGACCAACTTATTAGAAAAGGTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000422835.2
CDS CAA 90 bp TGTCATCCTTTTCTAATAAGTTGGTCACCGTCAGAGTCCCGGAGGTaGCCGCGAAGTCTGATCCAGCAGAAGGAGCCCGTGCCTCCGCAC +
Preference number: 6 (lower is better)
Translates to: CHPFLISWSPSESRR*PRSLIQQKEPVPPH
Trigger: GTGCGGAGGCACGGGCTCCTTCTGCTGGATCAGACTTCGCGGCAACCTCCGGGACTCTGACGGTGACCAACTTATTAGAAAAGGATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674886.1
ENST00000675612.1
CDS TCA 72 bp TTCTCCGCAAGGCACAGAGACCTTGAGGGGTTTGGGTaGGGCCCGTGGCAAAGGCAGAGACATACATATGCG +
Preference number: 6 (lower is better)
Translates to: FSARHRDLEGFG*GPWQRQRHTYA
Trigger: CGCATATGTATGTCTCTGCCTTTGCCACGGGCCTCACCCAAACCCCTCAAGGTCTCTGTGCCTTGCGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS CCA 72 bp CCTGTAGCACAGCACCCACAAGAGGCTGGACCTGGATaGCATCACCAGGCCTCACACCCACATTTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: PVAQHPQEAGPG*HHQASHPHFSV
Trigger: CACAGAAAAATGTGGGTGTGAGGCCTGGTGATGCCATCCAGGTCCAGCCTCTTGTGGGTGCTGTGCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 72 bp CAGGATTCTCCGCAAGGCACAGAGACCTTGAGGGGTTaGGGTGAGGCCCGTGGCAAAGGCAGAGACATACAT +
Preference number: 6 (lower is better)
Translates to: QDSPQGTETLRG*GEARGKGRDIH
Trigger: ATGTATGTCTCTGCCTTTGCCACGGGCCTCACCCAAACCCCTCAAGGTCTCTGTGCCTTGCGGAGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS TCA 72 bp AATCGCCCAGGTCTTCGGAGAGCAGCATCCAAGGCATaGGGGCGATTTGTGGCCCCAAGAACCAACACTTGT +
Preference number: 6 (lower is better)
Translates to: NRPGLRRAASKA*GRFVAPRTNTC
Trigger: ACAAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGCTCTCCGAAGACCTGGGCGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 72 bp TTTCTAATAAGTTGGTCACCGTCAGAGTCCCGGAGGTaGCCGCGAAGTCTGATCCAGCAGAAGGAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: FLISWSPSESRR*PRSLIQQKEPV
Trigger: CACGGGCTCCTTCTGCTGGATCAGACTTCGCGGCAACCTCCGGGACTCTGACGGTGACCAACTTATTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS TCA 72 bp GAGCACTATTTGCCAGCTGCAGCAGCTCAGCCTCAGTaGGCAAATGGGGTACCCTTCGAAGCAGTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: EHYLPAAAAQPQ*ANGVPFEAVSG
Trigger: TCCAGAAACTGCTTCGAAGGGTACCCCATTTGCTCACTGAGGCTGAGCTGCTGCAGCTGGCAAATAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS GCA 72 bp CATTTCACTCAGGCCGACCTTGCCTCCAGGAAATCCTaGCATAGGCCAGGCTGTATACACCTCTTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: HFTQADLASRKS*HRPGCIHLLLS
Trigger: GGAAAGCAAGAGGTGTATACAGCCTGGCCTATGGCAGGATTTCCTGGAGGCAAGGTCGGCCTGAGTGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 72 bp CCCACATTTTTCTGTGCCATTTCACTCAGGCCGACCTaGCCTCCAGGAAATCCTGCCATAGGCCAGGCTGTA +
Preference number: 6 (lower is better)
Translates to: PTFFCAISLRPT*PPGNPAIGQAV
Trigger: TACAGCCTGGCCTATGGCAGGATTTCCTGGAGGCAAGGTCGGCCTGAGTGAAATGGCACAGAAAAATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 90 bp ATCGCCCAGGTCTTCGGAGAGCAGCATCCAAGGCATGAGGGCGATTaGTGGCCCCAAGAACCAACACTTGTCCTTCACTTACTTCTGAAC +
Preference number: 6 (lower is better)
Translates to: IAQVFGEQHPRHEGD*WPQEPTLVLHLLLN
Trigger: GTTCAGAAGTAAGTGAAGGACAAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGCTCTCCGAAGACCTGGGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS TCA 72 bp AAGGCCATTCTTTGGGCATCAGTGTCAGAGTCACTCTaGGGCCCTCCCAATATCATGCCATCTGCCCCTTTC +
Preference number: 6 (lower is better)
Translates to: KAILWASVSESL*GPPNIMPSAPF
Trigger: GAAAGGGGCAGATGGCATGATATTGGGAGGGCCTCAGAGTGACTCTGACACTGATGCCCAAAGAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS GCA 72 bp CAGTGTCAGAGTCACTCTGAGGCCCTCCCAATATCATaGCATCTGCCCCTTTCACTCGCAATACTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: QCQSHSEALPIS*HLPLSLAILAA
Trigger: AGCTGCAAGTATTGCGAGTGAAAGGGGCAGATGGCATGATATTGGGAGGGCCTCAGAGTGACTCTGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CAA 72 bp ACTGGTTTCCATGCTGGACTGTTCAAAGGCCATTCTTaGGGCATCAGTGTCAGAGTCACTCTGAGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TGFHAGLFKGHS*GISVRVTLRPS
Trigger: GGAGGGCCTCAGAGTGACTCTGACACTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CAA 72 bp GTCTTCGGAGAGCAGCATCCAAGGCATGAGGGCGATTaGTGGCCCCAAGAACCAACACTTGTCCTTCACTTA +
Preference number: 6 (lower is better)
Translates to: VFGEQHPRHEGD*WPQEPTLVLHL
Trigger: TAAGTGAAGGACAAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGCTCTCCGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 90 bp CTCCAGGCTACTGGTTTCCATGCTGGACTGTTCAAAGGCCATTCTTaGGGCATCAGTGTCAGAGTCACTCTGAGGCCCTCCCAATATCAT +
Preference number: 6 (lower is better)
Translates to: LQATGFHAGLFKGHS*GISVRVTLRPSQYH
Trigger: ATGATATTGGGAGGGCCTCAGAGTGACTCTGACACTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CCA 72 bp TTCGGAGAGCAGCATCCAAGGCATGAGGGCGATTTGTaGCCCCAAGAACCAACACTTGTCCTTCACTTACTT +
Preference number: 6 (lower is better)
Translates to: FGEQHPRHEGDL*PQEPTLVLHLL
Trigger: AAGTAAGTGAAGGACAAGTGTTGGTTCTTGGGGCCACAAATCGCCCTCATGCCTTGGATGCTGCTCTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CCA 72 bp TTTGCCAGCTGCAGCAGCTCAGCCTCAGTGAGCAAATaGGGTACCCTTCGAAGCAGTTTCTGGAGAATATCT +
Preference number: 6 (lower is better)
Translates to: FASCSSSASVSK*GTLRSSFWRIS
Trigger: AGATATTCTCCAGAAACTGCTTCGAAGGGTACCCCATTTGCTCACTGAGGCTGAGCTGCTGCAGCTGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CCA 72 bp GCAGCAGAGGGCAAGGACGAACCATTTTCCGCGCTTTaGTTCAACCGCTTTCTATTCTTCTTGGAAGACATG +
Preference number: 6 (lower is better)
Translates to: AAEGKDEPFSAL*FNRFLFFLEDM
Trigger: CATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGTTCGTCCTTGCCCTCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 90 bp ACAAGAGGAAGCAGCAGAGGGCAAGGACGAACCATTTTCCGCGCTTaGGTTCAACCGCTTTCTATTCTTCTTGGAAGACATGGTCACAAG +
Preference number: 6 (lower is better)
Translates to: TRGSSRGQGRTIFRA*VQPLSILLGRHGHK
Trigger: CTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGTTCGTCCTTGCCCTCTGCTGCTTCCTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS GCA 72 bp GGTCCCAGCTGCTTCATTACACAAGACTTTCAAGTCTaGTCCAACGTATCCATGAGCACTATTTGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: GPSCFITQDFQV*SNVSMSTICQL
Trigger: CAGCTGGCAAATAGTGCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTGTGTAATGAAGCAGCTGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675612.1
CDS CCA 72 bp TTTCCGCGCTTTGGTTCAACCGCTTTCTATTCTTCTTaGAAGACATGGTCACAAGGTACCCTAGCCGAAGCA +
Preference number: 6 (lower is better)
Translates to: FPRFGSTAFYSS*KTWSQGTLAEA
Trigger: TGCTTCGGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CCA 72 bp GCTGTAAGGATAACTCCAGGCTACTGGTTTCCATGCTaGACTGTTCAAAGGCCATTCTTTGGGCATCAGTGT +
Preference number: 6 (lower is better)
Translates to: AVRITPGYWFPC*TVQRPFFGHQC
Trigger: ACACTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTATCCTTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CCA 72 bp TCTTCCAGGCCGCATCAAAGCCTTGTCTATCCTATCTaGACGGTTAGTAGCTGCCAAAATGGTCACATCCTT +
Preference number: 6 (lower is better)
Translates to: SSRPHQSLVYPI*TVSSCQNGHIL
Trigger: AAGGATGTGACCATTTTGGCAGCTACTAACCGTCCAGATAGGATAGACAAGGCTTTGATGCGGCCTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS CAA 72 bp TTTTCCGCGCTTTGGTTCAACCGCTTTCTATTCTTCTaGGAAGACATGGTCACAAGGTACCCTAGCCGAAGC +
Preference number: 6 (lower is better)
Translates to: FSALWFNRFLFF*EDMVTRYPSRS
Trigger: GCTTCGGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 72 bp AGCAGCAGAGGGCAAGGACGAACCATTTTCCGCGCTTaGGTTCAACCGCTTTCTATTCTTCTTGGAAGACAT +
Preference number: 6 (lower is better)
Translates to: SSRGQGRTIFRA*VQPLSILLGRH
Trigger: ATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGTTCGTCCTTGCCCTCTGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 90 bp GACGAACCATTTTCCGCGCTTTGGTTCAACCGCTTTCTATTCTTCTaGGAAGACATGGTCACAAGGTACCCTAGCCGAAGCAGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: DEPFSALWFNRFLFF*EDMVTRYPSRSSRK
Trigger: TTTTCTACTGCTTCGGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAAGCGCGGAAAATGGTTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 90 bp AGGCCCTCCCAATATCATGCCATCTGCCCCTTTCACTCGCAATACTaGCAGCTTGTACGGTCGTCCATAGAATGTACAATACAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: RPSQYHAICPFHSQY*QLVRSSIECTIQKV
Trigger: AACTTTCTGTATTGTACATTCTATGGACGACCGTACAAGCTGCAAGTATTGCGAGTGAAAGGGGCAGATGGCATGATATTGGGAGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS TCA 72 bp CCCTTCTTGTTGCTGCATCCGGTAAAGGCACATAGATaGTTCTATCAATTCTTCCAGGCCGCATCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: PFLLLHPVKAHR*FYQFFQAASKP
Trigger: AGGCTTTGATGCGGCCTGGAAGAATTGATAGAATCATCTATGTGCCTTTACCGGATGCAGCAACAAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS GCA 72 bp TTAGCTGTAAGGATAACTCCAGGCTACTGGTTTCCATaGTGGACTGTTCAAAGGCCATTCTTTGGGCATCAG +
Preference number: 6 (lower is better)
Translates to: LAVRITPGYWFP*WTVQRPFFGHQ
Trigger: CTGATGCCCAAAGAATGGCCTTTGAACAGTCCAGCATGGAAACCAGTAGCCTGGAGTTATCCTTACAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CCA 72 bp CTTGATGTTGGGATCTGGGTATCCTCCAGATCTAACTaGCTTAGCTGTAAGGATAACTCCAGGCTACTGGTT +
Preference number: 6 (lower is better)
Translates to: LDVGIWVSSRSN*LSCKDNSRLLV
Trigger: AACCAGTAGCCTGGAGTTATCCTTACAGCTAAGCCAGTTAGATCTGGAGGATACCCAGATCCCAACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS CCA 72 bp GAAAGTCTGGGAAGGTGGTACCTTGTCTATCCTATCTaGACGGTTAGTAGCTGCCAAAATGGTCACATCCTT +
Preference number: 6 (lower is better)
Translates to: ESLGRWYLVYPI*TVSSCQNGHIL
Trigger: AAGGATGTGACCATTTTGGCAGCTACTAACCGTCCAGATAGGATAGACAAGGTACCACCTTCCCAGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422835.2
CDS TCA 72 bp TTTAGCTGTTCAATCCCATCCATTTCTGTTAAGAGCTaGGCCAAAACACGATCGGCTACATTCCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: FSCSIPSISVKS*AKTRSATFPAP
Trigger: AGGTGCTGGGAATGTAGCCGATCGTGTTTTGGCTCAGCTCTTAACAGAAATGGATGGGATTGAACAGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000675612.1
CDS GCA 72 bp ACAGAGACCTGCTTCATTACACAAGACTTTCAAGTCTaGTCCAACGTATCCATGAGCACTATTTGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: TETCFITQDFQV*SNVSMSTICQL
Trigger: CAGCTGGCAAATAGTGCTCATGGATACGTTGGAGCAGACTTGAAAGTCTTGTGTAATGAAGCAGGTCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
CDS CCA 72 bp GCAGTTTCTGGAGAATATCTAGCCGGTCCTGAGCATTaGGAACTCCAATCTCAATCTCTTTATCAAATCGCC +
Preference number: 6 (lower is better)
Translates to: AVSGEYLAGPEH*ELQSQSLYQIA
Trigger: GGCGATTTGATAAAGAGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGCTAGATATTCTCCAGAAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS TCA 72 bp CTTCGAAGCAGTTTCTGGAGAATATCTAGCCGGTCCTaGGCATTGGGAACTCCAATCTCAATCTCTTTATCA +
Preference number: 6 (lower is better)
Translates to: LRSSFWRISSRS*ALGTPISISLS
Trigger: TGATAAAGAGATTGAGATTGGAGTTCCCAATGCTCAGGACCGGCTAGATATTCTCCAGAAACTGCTTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS TCA 72 bp GGACATCAATTGCTATTTCCCTCATGGCACTGGGTCTaGTATCATTCATTGCCTGCAAGAAATCCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: GHQLLFPSWHWV*YHSLPARNPSE
Trigger: CTCTGAAGGATTTCTTGCAGGCAATGAATGATATCAGACCCAGTGCCATGAGGGAAATAGCAATTGATGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS GCA 72 bp CCTGAGTCAAGCCATTCCCGTAATTACCTGCTTCAGTaGAAAGAGATGGGTACACAGTTACATTTCCTAAGA +
Preference number: 6 (lower is better)
Translates to: PESSHSRNYLLQ*KEMGTQLHFLR
Trigger: TCTTAGGAAATGTAACTGTGTACCCATCTCTTTGCACTGAAGCAGGTAATTACGGGAATGGCTTGACTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675392.1
CDS GCA 72 bp CTGAGTTTCCTGAGTCAAGCCATTCCCGTAATTACCTaGTTCAGTGCAAAGAGATGGGTACACAGTTACATT +
Preference number: 6 (lower is better)
Translates to: LSFLSQAIPVIT*FSAKRWVHSYI
Trigger: AATGTAACTGTGTACCCATCTCTTTGCACTGAAGCAGGTAATTACGGGAATGGCTTGACTCAGGAAACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675392.1
CDS CCA 72 bp TTTGGTTCAACCGCTTTCTATTCTTCTTGGAAGACATaGTCACAAGGTACCCTAGCCGAAGCAGTAGAAAAG +
Preference number: 6 (lower is better)
Translates to: FGSTAFYSSWKT*SQGTLAEAVEK
Trigger: CTTTTCTACTGCTTCGGCTAGGGTACCTTGTGACCATGTCTTCCAAGAAGAATAGAAAGCGGTTGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS CAA 72 bp CAATATCATGCCATCTGCCCCTTTCACTCGCAATACTaGCAGCTTGTACGGTCGTCCATAGAATGTACAATA +
Preference number: 6 (lower is better)
Translates to: QYHAICPFHSQY*QLVRSSIECTI
Trigger: TATTGTACATTCTATGGACGACCGTACAAGCTGCAAGTATTGCGAGTGAAAGGGGCAGATGGCATGATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS GCA 72 bp TTCATCAAAGAAAATAATGGAAGGCGCCACTGCTCTTaGTTTTCGGAAGGTCTCTCTAACTGCTCTTTCAGA +
Preference number: 6 (lower is better)
Translates to: FIKENNGRRHCS*FSEGLSNCSFR
Trigger: TCTGAAAGAGCAGTTAGAGAGACCTTCCGAAAAGCAAGAGCAGTGGCGCCTTCCATTATTTTCTTTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000675612.1
CDS GCA 72 bp CAACAAAGCAAGACCTCGTCTATTTGGGACATCAATTaGTATTTCCCTCATGGCACTGGGTCTGATATCATT +
Preference number: 6 (lower is better)
Translates to: QQSKTSSIWDIN*YFPHGTGSDII
Trigger: AATGATATCAGACCCAGTGCCATGAGGGAAATAGCAATTGATGTCCCAAATAGACGAGGTCTTGCTTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674886.1
CDS TCA 72 bp TCATCCAGGTCAACTTCATTACTGACAGGCATGGAGTaGAACTGCAGCTTAAATATTTCCCTTCTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: SSRSTSLLTGME*NCSLNISLLVA
Trigger: AGCAACAAGAAGGGAAATATTTAAGCTGCAGTTTCACTCCATGCCTGTCAGTAATGAAGTTGACCTGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274008.5
ENST00000675612.1
CDS CCA 72 bp CACCTCTTGCTTTCCGTTCAAACTAGTAAGCAACACTaGTCGACCTATACATATATTTGCAGACTTCATAGT +
Preference number: 6 (lower is better)
Translates to: HLLLSVQTSKQH*STYTYICRLHS
Trigger: ACTATGAAGTCTGCAAATATATGTATAGGTCGACCAGTGTTGCTTACTAGTTTGAACGGAAAGCAAGAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1
CDS GCA 72 bp TGTACGGTCGTCCATAGAATGTACAATACAGAAAGTTaGCTGGTAAAACAATCTTGCCATCTAGTTTTCTCA +
Preference number: 6 (lower is better)
Translates to: CTVVHRMYNTES*LVKQSCHLVFS
Trigger: TGAGAAAACTAGATGGCAAGATTGTTTTACCAGGCAACTTTCTGTATTGTACATTCTATGGACGACCGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675392.1
ENST00000675612.1
CDS TCA 72 bp TGGTTTATCCCTTCAGTCATTACAGATGACCCAGCATaGCAAGATACTTATTCTAGATCCAATACAGGTAAT +
Preference number: 6 (lower is better)
Translates to: WFIPSVITDDPA*QDTYSRSNTGN
Trigger: ATTACCTGTATTGGATCTAGAATAAGTATCTTGTCATGCTGGGTCATCTGTAATGACTGAAGGGATAAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675392.1
CDS GCA 72 bp ACTAGTAAGCAACACTGGTCGACCTATACATATATTTaGAGACTTCATAGTGTTGAGTCCAAGATGAATAAG +
Preference number: 6 (lower is better)
Translates to: TSKQHWSTYTYI*RLHSVESKMNK
Trigger: CTTATTCATCTTGGACTCAACACTATGAAGTCTGCAAATATATGTATAGGTCGACCAGTGTTGCTTACTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274008.5
ENST00000422835.2
ENST00000674886.1
ENST00000675612.1