Pregenerated sensors for SPATA41 (Homo sapiens)
Ensembl gene IDs: ENSG00000189419Ensembl transcript IDs: ENST00000558307.1, ENST00000560282.1, ENST00000647665.1, ENST00000662214.1
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGCCAACCACTCTCTGTGGGGCCTGTGTGCTTCCTCCTGGGTTCTaGGGCGCTGGCGGCGTCCGCTTCACCGGGAACGGGAGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPTTLCGACVLPPGF*GAGGVRFTGNGSPS Trigger: GCTGGGGCTCCCGTTCCCGGTGAAGCGGACGCCGCCAGCGCCCCAGAACCCAGGAGGAAGCACACAGGCCCCACAGAGAGTGGTTGGCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 90 bp | CGAGGAGACAGCACTGGCGGTCCCGACACAACTGAATCGGCAGGATaGGGGCCCTTAGTGTTAGGCACCGGCGGAGCTGCATCCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGDSTGGPDTTESAG*GPLVLGTGGAASHP Trigger: GGGGTGGGATGCAGCTCCGCCGGTGCCTAACACTAAGGGCCCTCATCCTGCCGATTCAGTTGTGTCGGGACCGCCAGTGCTGTCTCCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 90 bp | TGGCTCTGGGAATGGCCACTGTCCAGAAAGCCCCGCGGCCGTCCATaGTCGCTCGCTCAGTCAGGCCCTTGTGGGGATATTGCAGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: WLWEWPLSRKPRGRP*SLAQSGPCGDIAER Trigger: TCGTTCTGCAATATCCCCACAAGGGCCTGACTGAGCGAGCGAGCATGGACGGCCGCGGGGCTTTCTGGACAGTGGCCATTCCCAGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 90 bp | AAGCAGCATCTGACGAGGAGACAGCACTGGCGGTCCCGACACAACTaGATCGGCAGGATGAGGGCCCTTAGTGTTAGGCACCGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQHLTRRQHWRSRHN*IGRMRALSVRHRRS Trigger: GCTCCGCCGGTGCCTAACACTAAGGGCCCTCATCCTGCCGATTCAGTTGTGTCGGGACCGCCAGTGCTGTCTCCTCGTCAGATGCTGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 90 bp | AACCACCCAGCCCGAAAGCAGCATGGGCTGTGCCCAGAGCCGCCGTaGCAGAAGCCCACGCTTAGAAATAGAGGGCCGAAGACCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NHPARKQHGLCPEPP*QKPTLRNRGPKTKE Trigger: CTCTTTGGTCTTCGGCCCTCTATTTCTAAGCGTGGGCTTCTGGCACGGCGGCTCTGGGCACAGCCCATGCTGCTTTCGGGCTGGGTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 90 bp | GGCAACTCCAGTGGCATCTTCTGCGGGGAGACCAGAAGCAGCATCTaGCGAGGAGACAGCACTGGCGGTCCCGACACAACTGAATCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNSSGIFCGETRSSI*RGDSTGGPDTTESA Trigger: TGCCGATTCAGTTGTGTCGGGACCGCCAGTGCTGTCTCCTCGTCAGATGCTGCTTCTGGTCTCCCCGCAGAAGATGCCACTGGAGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 90 bp | TCAGGAGCCGACTCCTGGCAGGTTGGTTGTAGGGGCCCTCTTGAGTaGTTCACACACAGCAGTCCTGTTGGGGTGAAGGTCACCGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SGADSWQVGCRGPLE*FTHSSPVGVKVTVT Trigger: AGTGACGGTGACCTTCACCCCAACAGGACTGCTGTGTGTGAAGCACTCAAGAGGGCCCCTACAACCAACCTGCCAGGAGTCGGCTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 90 bp | ACCCCTGCCTCCCTGGCAGCCACTGACTCATCCTGTGACGAAGAATaGCTAACCTCCTGGGAATGCAGCCCAGCAGGTCTCAGCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TPASLAATDSSCDEE*LTSWECSPAGLSLI Trigger: AATGAGGCTGAGACCTGCTGGGCTGCATTCCCAGGAGGTTAGGCATTCTTCGTCACAGGATGAGTCAGTGGCTGCCAGGGAGGCAGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560282.1 ENST00000662214.1 |
||
| CDS CCA 90 bp | GGTGTGCCCGGGTTCCAAGACCCCTGCGTAGACTCTGTCTATAGGTaGAAGAAGGCCTTTGCCCCGAGGCATCCAGAGGTAACGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVPGFQDPCVDSVYR*KKAFAPRHPEVTVR Trigger: TCTCACCGTTACCTCTGGATGCCTCGGGGCAAAGGCCTTCTTCCACCTATAGACAGAGTCTACGCAGGGGTCTTGGAACCCGGGCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 90 bp | TCCAGCCTCAAATTCCGCGATTTGGCCGGCATCCTAATCCCCGAGTaGCTCTTGCCAACCACTCTCTGTGGGGCCTGTGTGCTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLKFRDLAGILIPE*LLPTTLCGACVLPP Trigger: AGGAGGAAGCACACAGGCCCCACAGAGAGTGGTTGGCAAGAGTCACTCGGGGATTAGGATGCCGGCCAAATCGCGGAATTTGAGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 90 bp | CAACCTGCCTCCCTGGCAGCCACTGACTCATCCTGTGACGAAGAATaGCTAACCTCCTGGGAATGCAGCCCAGCAGGTCTCAGCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: QPASLAATDSSCDEE*LTSWECSPAGLSLI Trigger: AATGAGGCTGAGACCTGCTGGGCTGCATTCCCAGGAGGTTAGGCATTCTTCGTCACAGGATGAGTCAGTGGCTGCCAGGGAGGCAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CCA 90 bp | AGCCCAGCAGGTCTCAGCCTCATTTTGCGCAGCACCTGTTCAAGATaGAGTCGCTCTGGTTCGAACACCTCTGACAGCTGCCCGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: SPAGLSLILRSTCSR*SRSGSNTSDSCPTM Trigger: CATTGTCGGGCAGCTGTCAGAGGTGTTCGAACCAGAGCGACTCCATCTTGAACAGGTGCTGCGCAAAATGAGGCTGAGACCTGCTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 90 bp | CGCTTAGAAATAGAGGGCCGAAGACCAAAGAGGACTGCGGGTTCTTaGGCCAAACGTGACCCTCTCAAATCCCCCAACTCGGGGATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLEIEGRRPKRTAGS*AKRDPLKSPNSGIS Trigger: CGAAATCCCCGAGTTGGGGGATTTGAGAGGGTCACGTTTGGCCCAAGAACCCGCAGTCCTCTTTGGTCTTCGGCCCTCTATTTCTAAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 90 bp | CGGCCGTCCATGCTCGCTCGCTCAGTCAGGCCCTTGTGGGGATATTaGAGAACGAGTCCGAGTTACTATCCCTTTAAATACAGGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPSMLARSVRPLWGY*RTSPSYYPFKYRRF Trigger: GAAACGCCTGTATTTAAAGGGATAGTAACTCGGACTCGTTCTGCAATATCCCCACAAGGGCCTGACTGAGCGAGCGAGCATGGACGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS CCA 90 bp | CCTGTATCTGGCAAAACCTCCCCTGAGATGCAATTCATTGGTTCCTaGGGTAACCAACCTGCCTCCCTGGCAGCCACTGACTCATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PVSGKTSPEMQFIGS*GNQPASLAATDSSC Trigger: ACAGGATGAGTCAGTGGCTGCCAGGGAGGCAGGTTGGTTACCCCAGGAACCAATGAATTGCATCTCAGGGGAGGTTTTGCCAGATACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 90 bp | TACAGGCAGTGTCTTTCTGAGTCTGATCCCTGTTGTCTTGAGAGCTaGGGTGAGGGAAAGTCGTCTTCAGAGCCCTCAGGGTCAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YRQCLSESDPCCLES*GEGKSSSEPSGSKQ Trigger: CTGCTTTGACCCTGAGGGCTCTGAAGACGACTTTCCCTCACCGCAGCTCTCAAGACAACAGGGATCAGACTCAGAAAGACACTGCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 90 bp | ACGGTTATCATGGTTGATTCTGGATCTACCAAAGTAGTGCTGCCTTaGCCGGGGCCCAGTTCTCATTGCCACACCAGCAACTTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVIMVDSGSTKVVLP*PGPSSHCHTSNFQH Trigger: GTGCTGGAAGTTGCTGGTGTGGCAATGAGAACTGGGCCCCGGTCAAGGCAGCACTACTTTGGTAGATCCAGAATCAACCATGATAACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 90 bp | GGCACTCCTCCTCCCAGCTCCAGACCATGTATCCAGCTGTTCAGTTaGCCACTTCAAAGAGCGAGACCATGGCATGTGATCCAGTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTPPPSSRPCIQLFS*PLQRARPWHVIQFQ Trigger: TTGAAACTGGATCACATGCCATGGTCTCGCTCTTTGAAGTGGTCAACTGAACAGCTGGATACATGGTCTGGAGCTGGGAGGAGGAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 90 bp | GCGCAGCACCTGTTCAAGATGGAGTCGCTCTGGTTCGAACACCTCTaGCAGCTGCCCGACAATGTGAATGTACTTAATGCCACTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: AQHLFKMESLWFEHL*QLPDNVNVLNATEL Trigger: AAGTTCAGTGGCATTAAGTACATTCACATTGTCGGGCAGCTGTCAGAGGTGTTCGAACCAGAGCGACTCCATCTTGAACAGGTGCTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 90 bp | TGTGAACTGCCTTCCCCTACCCAAATCCAAGATCCTCCTCAGTCTTaGAACCTTCCCACTGTGCCCTTAAGAGCTGCTGCTCCATATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CELPSPTQIQDPPQS*NLPTVPLRAAAPYP Trigger: AGGATATGGAGCAGCAGCTCTTAAGGGCACAGTGGGAAGGTTTCAAGACTGAGGAGGATCTTGGATTTGGGTAGGGGAAGGCAGTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 90 bp | AGAGGCTCAAGAGGGCTTCTTGGCCCTTTTGCCCTGCATCTCTTCTaGCATATGAGGACACAGCATTTGTCCTCTTCAGAAGATGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGSRGLLGPFALHLF*HMRTQHLSSSEDAA Trigger: TGCTGCATCTTCTGAAGAGGACAAATGCTGTGTCCTCATATGGCAGAAGAGATGCAGGGCAAAAGGGCCAAGAAGCCCTCTTGAGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 90 bp | GAACAGCTACTCCCTGATGCTGAACAAGGCCAAAGCCATATACTGTaGACAAGCACAAAACAGAGCCAGGCTGGCATGTGCTTCCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EQLLPDAEQGQSHIL*TSTKQSQAGMCFRK Trigger: TTTGCGGAAGCACATGCCAGCCTGGCTCTGTTTTGTGCTTGTTCACAGTATATGGCTTTGGCCTTGTTCAGCATCAGGGAGTAGCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 90 bp | CAAGAGGGCTTCTTGGCCCTTTTGCCCTGCATCTCTTCTGCCATATaGGGACACAGCATTTGTCCTCTTCAGAAGATGCAGCAACAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QEGFLALLPCISSAI*GHSICPLQKMQQQG Trigger: ACCTTGTTGCTGCATCTTCTGAAGAGGACAAATGCTGTGTCCTCATATGGCAGAAGAGATGCAGGGCAAAAGGGCCAAGAAGCCCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 90 bp | CTCCAGAGCCCTGTTTTCCCCATTTGTATTTCACTACTTTCCTGTTaGGCTTGGATTCCAGCCTCAAATTCCGCGATTTGGCCGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LQSPVFPICISLLSC*AWIPASNSAIWPAS Trigger: GGATGCCGGCCAAATCGCGGAATTTGAGGCTGGAATCCAAGCTCAACAGGAAAGTAGTGAAATACAAATGGGGAAAACAGGGCTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 90 bp | CAACACACCTTTCCCTTCCTTGGGATATTTCTCCTCTTTCAGCATTaGCGCATCAGGGTTCCAAAGCCCCGTTTCTCTCCTAGTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHTFPFLGIFLLFQH*RIRVPKPRFSPSSF Trigger: GAAAGAACTAGGAGAGAAACGGGGCTTTGGAACCCTGATGCGGCAATGCTGAAAGAGGAGAAATATCCCAAGGAAGGGAAAGGTGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 90 bp | TGCCGCTGTATACCCCTTTTCACTGTGTCTCTTCCTCTTTGCTCCTaGCTAGAATTTGCATGTGATTCCTGGAATTCCAGCAGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRCIPLFTVSLPLCS*LEFACDSWNSSSHL Trigger: GAGATGGCTGCTGGAATTCCAGGAATCACATGCAAATTCTAGTCAGGAGCAAAGAGGAAGAGACACAGTGAAAAGGGGTATACAGCGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 90 bp | TCTCTTCTGCCATATGAGGACACAGCATTTGTCCTCTTCAGAAGATaGAGCAACAAGGTGTCATCCTGGACACAGAGAGCTTACCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLPYEDTAFVLFRR*SNKVSSWTQRAYQT Trigger: TGTCTGGTAAGCTCTCTGTGTCCAGGATGACACCTTGTTGCTGCATCTTCTGAAGAGGACAAATGCTGTGTCCTCATATGGCAGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 90 bp | CTTCCACTTTCTCTTTCACAGCATTTCCTCCACAATACTGTGAACTaGCTTCCCCTACCCAAATCCAAGATCCTCCTCAGTCTTGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSLSQHFLHNTVN*LPLPKSKILLSLET Trigger: GGTTTCAAGACTGAGGAGGATCTTGGATTTGGGTAGGGGAAGGCAGTTCACAGTATTGTGGAGGAAATGCTGTGAAAGAGAAAGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 90 bp | TCAACCCTTCTTCAGTGCCTACTTTCTGTGTGCCACGTACTGAGATaGCAAATGAAGAGGCAGCAGCATATAAATTGCACTTCTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: STLLQCLLSVCHVLR*QMKRQQHINCTSFP Trigger: GGGGAAAGAAGTGCAATTTATATGCTGCTGCCTCTTCATTTGGCATCTCAGTACGTGGCACACAGAAAGTAGGCACTGAAGAAGGGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 90 bp | TTTCACTGTGTCTCTTCCTCTTTGCTCCTGACTAGAATTTGCATGTaGTTCCTGGAATTCCAGCAGCCATCTCGTAAGCATGAGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FHCVSSSLLLTRICM*FLEFQQPSRKHEEE Trigger: CTCTTCCTCATGCTTACGAGATGGCTGCTGGAATTCCAGGAATCACATGCAAATTCTAGTCAGGAGCAAAGAGGAAGAGACACAGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 90 bp | TCTTGTTTCATCTTAACACACACGAGATGCCTTGTCTTCATTTCGTaGACAGGCAAGGCCGAATTCCGTTTCACAGATAGAGGACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCFILTHTRCLVFIS*TGKAEFRFTDRGLR Trigger: TCTCAGTCCTCTATCTGTGAAACGGAATTCGGCCTTGCCTGTCCACGAAATGAAGACAAGGCATCTCGTGTGTGTTAAGATGAAACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 90 bp | TACTCATTAGGTCCTTCAACCCTTCTTCAGTGCCTACTTTCTGTGTaGCACGTACTGAGATGCCAAATGAAGAGGCAGCAGCATATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSLGPSTLLQCLLSV*HVLRCQMKRQQHIN Trigger: ATTTATATGCTGCTGCCTCTTCATTTGGCATCTCAGTACGTGGCACACAGAAAGTAGGCACTGAAGAAGGGTTGAAGGACCTAATGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 90 bp | CTGCATTCATTTATGTACTCATTAGGTCCTTCAACCCTTCTTCAGTaGCTACTTTCTGTGTGCCACGTACTGAGATGCCAAATGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHSFMYSLGPSTLLQ*LLSVCHVLRCQMKR Trigger: CCTCTTCATTTGGCATCTCAGTACGTGGCACACAGAAAGTAGGCACTGAAGAAGGGTTGAAGGACCTAATGAGTACATAAATGAATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 90 bp | ATTACTCTCTTGCTAAGATCTTGTTTCATCTTAACACACACGAGATaGCTTGTCTTCATTTCGTGGACAGGCAAGGCCGAATTCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITLLLRSCFILTHTR*LVFISWTGKAEFRF Trigger: GAAACGGAATTCGGCCTTGCCTGTCCACGAAATGAAGACAAGGCATCTCGTGTGTGTTAAGATGAAACAAGATCTTAGCAAGAGAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 90 bp | TACAACTCTGTAATTCCACGCTGGTTAATTACTCCAGAGAAACTCTaGCACATGTACAAGAATGTTTGTTCACCAGGGCACCTTATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: YNSVIPRWLITPEKL*HMYKNVCSPGHLIK Trigger: CTTAATAAGGTGCCCTGGTGAACAAACATTCTTGTACATGTGCCAGAGTTTCTCTGGAGTAATTAACCAGCGTGGAATTACAGAGTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 90 bp | ATAAATTGCACTTCTTTCCCCACAGTTCTCTATAGAGCTCTGTTATaGACTAGACACTGTTCCTGGTGCTGGGGATTTAGAAACGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: INCTSFPTVLYRALL*TRHCSWCWGFRNEK Trigger: TTTTTCGTTTCTAAATCCCCAGCACCAGGAACAGTGTCTAGTTCATAACAGAGCTCTATAGAGAACTGTGGGGAAAGAAGTGCAATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CCA 90 bp | CCACTTCAAAGAGCGAGACCATGGCATGTGATCCAGTTTCAAGGATaGATGAGAATGTTTCAAATCTGCTTTTGTTTTTGTTTGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLQRARPWHVIQFQG*MRMFQICFCFCLTL Trigger: CAAAGTCAAACAAAAACAAAAGCAGATTTGAAACATTCTCATCCATCCTTGAAACTGGATCACATGCCATGGTCTCGCTCTTTGAAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 90 bp | GAATTAAGAAATCATCCAGTGGATGATGGAAGGATCATGGGACACTaGTATCATTTGGGTACACATTGTACTTGTTTGGTTAACCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: ELRNHPVDDGRIMGH*YHLGTHCTCLVNPI Trigger: AATAGGGTTAACCAAACAAGTACAATGTGTACCCAAATGATATCAGTGTCCCATGATCCTTCCATCATCCACTGGATGATTTCTTAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 72 bp | AGTGACTCTTGCCAACCACTCTCTGTGGGGCCTGTGTaGTTCCTCCTGGGTTCTGGGGCGCTGGCGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SDSCQPLSVGPV*FLLGSGALAAS Trigger: GGACGCCGCCAGCGCCCCAGAACCCAGGAGGAAGCACACAGGCCCCACAGAGAGTGGTTGGCAAGAGTCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS CCA 72 bp | TTCACGCTGGTTGCAGGAGTAGCCAACCCCGCTCCCTaGCAGCCCGTGAGATGCCACATCCCCTCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FTLVAGVANPAP*QPVRCHIPSSR Trigger: CCTGCTGGAGGGGATGTGGCATCTCACGGGCTGCCAGGGAGCGGGGTTGGCTACTCCTGCAACCAGCGTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 72 bp | AGCACTGGCGGTCCCGACACAACTGAATCGGCAGGATaGGGGCCCTTAGTGTTAGGCACCGGCGGAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: STGGPDTTESAG*GPLVLGTGGAA Trigger: TGCAGCTCCGCCGGTGCCTAACACTAAGGGCCCTCATCCTGCCGATTCAGTTGTGTCGGGACCGCCAGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 72 bp | GAATGGCCACTGTCCAGAAAGCCCCGCGGCCGTCCATaGTCGCTCGCTCAGTCAGGCCCTTGTGGGGATATT | + |
|
Preference number: 6 (lower is better) Translates to: EWPLSRKPRGRP*SLAQSGPCGDI Trigger: AATATCCCCACAAGGGCCTGACTGAGCGAGCGAGCATGGACGGCCGCGGGGCTTTCTGGACAGTGGCCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 72 bp | CTGACGAGGAGACAGCACTGGCGGTCCCGACACAACTaGATCGGCAGGATGAGGGCCCTTAGTGTTAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LTRRQHWRSRHN*IGRMRALSVRH Trigger: GTGCCTAACACTAAGGGCCCTCATCCTGCCGATTCAGTTGTGTCGGGACCGCCAGTGCTGTCTCCTCGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 72 bp | AGTGGCATCTTCTGCGGGGAGACCAGAAGCAGCATCTaGCGAGGAGACAGCACTGGCGGTCCCGACACAACT | + |
|
Preference number: 6 (lower is better) Translates to: SGIFCGETRSSI*RGDSTGGPDTT Trigger: AGTTGTGTCGGGACCGCCAGTGCTGTCTCCTCGTCAGATGCTGCTTCTGGTCTCCCCGCAGAAGATGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS CCA 72 bp | CGGCCGTCCATGCTCGCTCGCTCAGTCAGGCCCTTGTaGGGATATTGCAGAACGAGTCCGAGTTACTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPSMLARSVRPL*GYCRTSPSYYP Trigger: GGGATAGTAACTCGGACTCGTTCTGCAATATCCCCACAAGGGCCTGACTGAGCGAGCGAGCATGGACGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 72 bp | GACTCCTGGCAGGTTGGTTGTAGGGGCCCTCTTGAGTaGTTCACACACAGCAGTCCTGTTGGGGTGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DSWQVGCRGPLE*FTHSSPVGVKV Trigger: GACCTTCACCCCAACAGGACTGCTGTGTGTGAAGCACTCAAGAGGGCCCCTACAACCAACCTGCCAGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 72 bp | GAATTCCAGCAGCCATCTCGTAAGCATGAGGAAGAGTaGCAGACCCCTGCCTCCCTGGCAGCCACTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: EFQQPSRKHEEE*QTPASLAATDS Trigger: TGAGTCAGTGGCTGCCAGGGAGGCAGGGGTCTGGCACTCTTCCTCATGCTTACGAGATGGCTGCTGGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560282.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | GTAAGCATGAGGAAGAGTGCCAGACCCCTGCCTCCCTaGCAGCCACTGACTCATCCTGTGACGAAGAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSMRKSARPLPP*QPLTHPVTKNA Trigger: GGCATTCTTCGTCACAGGATGAGTCAGTGGCTGCCAGGGAGGCAGGGGTCTGGCACTCTTCCTCATGCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560282.1 ENST00000662214.1 |
||
| CDS CAA 90 bp | TGCCTAACCTCCTGGGAATGCAGCCCAGCAGGTCTCAGCCTCATTTaGCGCAGCACCTGTTCAAGATGGAGTCGCTCTGGTTCGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: CLTSWECSPAGLSLI*RSTCSRWSRSGSNT Trigger: GGTGTTCGAACCAGAGCGACTCCATCTTGAACAGGTGCTGCGCAAAATGAGGCTGAGACCTGCTGGGCTGCATTCCCAGGAGGTTAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 72 bp | CCTGGGAATGCAGCCCAGCAGGTCTCAGCCTCATTTTaGGCAGCACCTGTTCAAGATGGAGTCGCTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGNAAQQVSASF*AAPVQDGVALV Trigger: AACCAGAGCGACTCCATCTTGAACAGGTGCTGCGCAAAATGAGGCTGAGACCTGCTGGGCTGCATTCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | ATAGAGGGCCGAAGACCAAAGAGGACTGCGGGTTCTTaGGCCAAACGTGACCCTCTCAAATCCCCCAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: IEGRRPKRTAGS*AKRDPLKSPNS Trigger: CGAGTTGGGGGATTTGAGAGGGTCACGTTTGGCCCAAGAACCCGCAGTCCTCTTTGGTCTTCGGCCCTCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | GGGTTCCAAGACCCCTGCGTAGACTCTGTCTATAGGTaGAAGAAGGCCTTTGCCCCGAGGCATCCAGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GFQDPCVDSVYR*KKAFAPRHPEV Trigger: TACCTCTGGATGCCTCGGGGCAAAGGCCTTCTTCCACCTATAGACAGAGTCTACGCAGGGGTCTTGGAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | GGCAAAACCTCCCCTGAGATGCAATTCATTGGTTCCTaGGGTAACCAACCTGCCTCCCTGGCAGCCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GKTSPEMQFIGS*GNQPASLAATD Trigger: GTCAGTGGCTGCCAGGGAGGCAGGTTGGTTACCCCAGGAACCAATGAATTGCATCTCAGGGGAGGTTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 72 bp | TTCCGACCCTGTTTTCAGGAGCCGACTCCTGGCAGGTaGGTTGTAGGGGCCCTCTTGAGTGCTTCACACACA | + |
|
Preference number: 6 (lower is better) Translates to: FRPCFQEPTPGR*VVGALLSASHT Trigger: TGTGTGTGAAGCACTCAAGAGGGCCCCTACAACCAACCTGCCAGGAGTCGGCTCCTGAAAACAGGGTCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CAA 72 bp | TCCTGGGAATGCAGCCCAGCAGGTCTCAGCCTCATTTaGCGCAGCACCTGTTCAAGATGGAGTCGCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SWECSPAGLSLI*RSTCSRWSRSG Trigger: ACCAGAGCGACTCCATCTTGAACAGGTGCTGCGCAAAATGAGGCTGAGACCTGCTGGGCTGCATTCCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 72 bp | TCATCCTGTGACGAAGAATGCCTAACCTCCTGGGAATaGAGCCCAGCAGGTCTCAGCCTCATTTTGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCDEECLTSWE*SPAGLSLILRS Trigger: GCTGCGCAAAATGAGGCTGAGACCTGCTGGGCTGCATTCCCAGGAGGTTAGGCATTCTTCGTCACAGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | GGTCTCAGCCTCATTTTGCGCAGCACCTGTTCAAGATaGAGTCGCTCTGGTTCGAACACCTCTGACAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLSLILRSTCSR*SRSGSNTSDSC Trigger: GCAGCTGTCAGAGGTGTTCGAACCAGAGCGACTCCATCTTGAACAGGTGCTGCGCAAAATGAGGCTGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | CCCCTCATTGTGCTGGTATTAAGAGGTGGAGCCTTTTaGGTTAAGGCCCAAAGTCATGAGGGCTCTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLIVLVLRGGAF*VKAQSHEGSAL Trigger: GAGGGCAGAGCCCTCATGACTTTGGGCCTTAACCCAAAAGGCTCCACCTCTTAATACCAGCACAATGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 90 bp | GAGCCTTATACAGGCAGTGTCTTTCTGAGTCTGATCCCTGTTGTCTaGAGAGCTGCGGTGAGGGAAAGTCGTCTTCAGAGCCCTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: EPYTGSVFLSLIPVV*RAAVRESRLQSPQG Trigger: ACCCTGAGGGCTCTGAAGACGACTTTCCCTCACCGCAGCTCTCAAGACAACAGGGATCAGACTCAGAAAGACACTGCCTGTATAAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 72 bp | CCTTCCCCTACCCAAATCCAAGATCCTCCTCAGTCTTaGAACCTTCCCACTGTGCCCTTAAGAGCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPTQIQDPPQS*NLPTVPLRAAA Trigger: AGCAGCAGCTCTTAAGGGCACAGTGGGAAGGTTTCAAGACTGAGGAGGATCTTGGATTTGGGTAGGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 72 bp | ATGGTTGATTCTGGATCTACCAAAGTAGTGCTGCCTTaGCCGGGGCCCAGTTCTCATTGCCACACCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: MVDSGSTKVVLP*PGPSSHCHTSN Trigger: GTTGCTGGTGTGGCAATGAGAACTGGGCCCCGGTCAAGGCAGCACTACTTTGGTAGATCCAGAATCAACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 72 bp | CCTCCCAGCTCCAGACCATGTATCCAGCTGTTCAGTTaGCCACTTCAAAGAGCGAGACCATGGCATGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: PPSSRPCIQLFS*PLQRARPWHVI Trigger: GATCACATGCCATGGTCTCGCTCTTTGAAGTGGTCAACTGAACAGCTGGATACATGGTCTGGAGCTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 72 bp | GGAATCCTTACCTCTGCCTCCTGCCATCTAATCTCCTaGCAGGGCCTCTTTTTGGCAGAAGCTAGCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GILTSASCHLIS*QGLFLAEASKK Trigger: CTTCTTGCTAGCTTCTGCCAAAAAGAGGCCCTGGCAGGAGATTAGATGGCAGGAGGCAGAGGTAAGGATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | ACTGACTCATCCTGTGACGAAGAATGCCTAACCTCCTaGGAATGCAGCCCAGCAGGTCTCAGCCTCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TDSSCDEECLTS*ECSPAGLSLIL Trigger: CAAAATGAGGCTGAGACCTGCTGGGCTGCATTCCCAGGAGGTTAGGCATTCTTCGTCACAGGATGAGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CAA 72 bp | ACAGGCAGTGTCTTTCTGAGTCTGATCCCTGTTGTCTaGAGAGCTGCGGTGAGGGAAAGTCGTCTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGSVFLSLIPVV*RAAVRESRLQS Trigger: GCTCTGAAGACGACTTTCCCTCACCGCAGCTCTCAAGACAACAGGGATCAGACTCAGAAAGACACTGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CAA 90 bp | AGGCACTCCTCCTCCCAGCTCCAGACCATGTATCCAGCTGTTCAGTaGACCACTTCAAAGAGCGAGACCATGGCATGTGATCCAGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RHSSSQLQTMYPAVQ*TTSKSETMACDPVS Trigger: TGAAACTGGATCACATGCCATGGTCTCGCTCTTTGAAGTGGTCAACTGAACAGCTGGATACATGGTCTGGAGCTGGGAGGAGGAGTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 90 bp | GGCCCTTTTGCCCTGCATCTCTTCTGCCATATGAGGACACAGCATTaGTCCTCTTCAGAAGATGCAGCAACAAGGTGTCATCCTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: GPFALHLFCHMRTQH*SSSEDAATRCHPGH Trigger: GTGTCCAGGATGACACCTTGTTGCTGCATCTTCTGAAGAGGACAAATGCTGTGTCCTCATATGGCAGAAGAGATGCAGGGCAAAAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 72 bp | CTCCCTGATGCTGAACAAGGCCAAAGCCATATACTGTaGACAAGCACAAAACAGAGCCAGGCTGGCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPDAEQGQSHIL*TSTKQSQAGMC Trigger: GCACATGCCAGCCTGGCTCTGTTTTGTGCTTGTTCACAGTATATGGCTTTGGCCTTGTTCAGCATCAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 72 bp | GGTCCTTCAACCCTTCTTCAGTGCCTACTTTCTGTGTaGCACGTACTGAGATGCCAAATGAAGAGGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPSTLLQCLLSV*HVLRCQMKRQQ Trigger: CTGCTGCCTCTTCATTTGGCATCTCAGTACGTGGCACACAGAAAGTAGGCACTGAAGAAGGGTTGAAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CCA 72 bp | AGCTTCAGTAAAGAGCAGAACATGGAAGTGGGTATGTaGGGCTGGGAGACAGAGCCGCTGAAGGTCTTAATC | + |
|
Preference number: 6 (lower is better) Translates to: SFSKEQNMEVGM*GWETEPLKVLI Trigger: GATTAAGACCTTCAGCGGCTCTGTCTCCCAGCCCCACATACCCACTTCCATGTTCTGCTCTTTACTGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | GTCCTCTTCAGAAGATGCAGCAACAAGGTGTCATCCTaGACACAGAGAGCTTACCAGACACTGAATCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VLFRRCSNKVSS*TQRAYQTLNLP Trigger: CGGCAGATTCAGTGTCTGGTAAGCTCTCTGTGTCCAGGATGACACCTTGTTGCTGCATCTTCTGAAGAGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 72 bp | TCCTCCCAGCTCCAGACCATGTATCCAGCTGTTCAGTaGACCACTTCAAAGAGCGAGACCATGGCATGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSQLQTMYPAVQ*TTSKSETMACD Trigger: ATCACATGCCATGGTCTCGCTCTTTGAAGTGGTCAACTGAACAGCTGGATACATGGTCTGGAGCTGGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 72 bp | CTTTCCCTTCCTTGGGATATTTCTCCTCTTTCAGCATaGCCGCATCAGGGTTCCAAAGCCCCGTTTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSLPWDISPLSA*PHQGSKAPFLS Trigger: GGAGAGAAACGGGGCTTTGGAACCCTGATGCGGCAATGCTGAAAGAGGAGAAATATCCCAAGGAAGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS CAA 90 bp | GCTCCAGAGCCCTGTTTTCCCCATTTGTATTTCACTACTTTCCTGTaGAGCTTGGATTCCAGCCTCAAATTCCGCGATTTGGCCGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: APEPCFPHLYFTTFL*SLDSSLKFRDLAGI Trigger: GATGCCGGCCAAATCGCGGAATTTGAGGCTGGAATCCAAGCTCAACAGGAAAGTAGTGAAATACAAATGGGGAAAACAGGGCTCTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 72 bp | CTGTTCAAGATGGAGTCGCTCTGGTTCGAACACCTCTaGCAGCTGCCCGACAATGTGAATGTACTTAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFKMESLWFEHL*QLPDNVNVLNA Trigger: GGCATTAAGTACATTCACATTGTCGGGCAGCTGTCAGAGGTGTTCGAACCAGAGCGACTCCATCTTGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 72 bp | TATTGGATTCCAGCACCAGGGGCCTGTGTCTACTGCTaGACTGTTGAAGACACTGTCACGGTTATCATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: YWIPAPGACVYC*TVEDTVTVIMV Trigger: AACCATGATAACCGTGACAGTGTCTTCAACAGTGCAGCAGTAGACACAGGCCCCTGGTGCTGGAATCCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 72 bp | AGAGGGCTTCTTGGCCCTTTTGCCCTGCATCTCTTCTaGCATATGAGGACACAGCATTTGTCCTCTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGLLGPFALHLF*HMRTQHLSSSE Trigger: TTCTGAAGAGGACAAATGCTGTGTCCTCATATGGCAGAAGAGATGCAGGGCAAAAGGGCCAAGAAGCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 72 bp | TTTCCCTTCCTTGGGATATTTCTCCTCTTTCAGCATTaGCGCATCAGGGTTCCAAAGCCCCGTTTCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FPFLGIFLLFQH*RIRVPKPRFSP Trigger: AGGAGAGAAACGGGGCTTTGGAACCCTGATGCGGCAATGCTGAAAGAGGAGAAATATCCCAAGGAAGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS GCA 72 bp | ATGCTCGCTCGCTCAGTCAGGCCCTTGTGGGGATATTaGAGAACGAGTCCGAGTTACTATCCCTTTAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: MLARSVRPLWGY*RTSPSYYPFKY Trigger: GTATTTAAAGGGATAGTAACTCGGACTCGTTCTGCAATATCCCCACAAGGGCCTGACTGAGCGAGCGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 72 bp | GAGAAGCTACTGGCTAGAGTTCTAGCAGAGTTCATTTaGGGAGCTTCCTTCTGCCGCTGTATACCCCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: EKLLARVLAEFI*GASFCRCIPLF Trigger: GAAAAGGGGTATACAGCGGCAGAAGGAAGCTCCTCAAATGAACTCTGCTAGAACTCTAGCCAGTAGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 72 bp | GGGTTAAGGCCCAAAGTCATGAGGGCTCTGCCCTCATaGATGGAATTAATGCCCTCATTAAAGAGGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLRPKVMRALPS*MELMPSLKRLK Trigger: CTTGAGCCTCTTTAATGAGGGCATTAATTCCATTCATGAGGGCAGAGCCCTCATGACTTTGGGCCTTAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 72 bp | CCATATGAGGACACAGCATTTGTCCTCTTCAGAAGATaGAGCAACAAGGTGTCATCCTGGACACAGAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PYEDTAFVLFRR*SNKVSSWTQRA Trigger: AGCTCTCTGTGTCCAGGATGACACCTTGTTGCTGCATCTTCTGAAGAGGACAAATGCTGTGTCCTCATATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CCA 72 bp | TTAATGCCCTCATTAAAGAGGCTCAAGAGGGCTTCTTaGCCCTTTTGCCCTGCATCTCTTCTGCCATATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LMPSLKRLKRAS*PFCPASLLPYE Trigger: CTCATATGGCAGAAGAGATGCAGGGCAAAAGGGCCAAGAAGCCCTCTTGAGCCTCTTTAATGAGGGCATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 90 bp | GAAGCCGCCTATTTTTCATCGTTCTGCAACACACCTTTCCCTTCCTaGGGATATTTCTCCTCTTTCAGCATTGCCGCATCAGGGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: EAAYFSSFCNTPFPS*GYFSSFSIAASGFQ Trigger: TTGGAACCCTGATGCGGCAATGCTGAAAGAGGAGAAATATCCCAAGGAAGGGAAAGGTGTGTTGCAGAACGATGAAAAATAGGCGGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS CAA 90 bp | GAGCCCTGTTTTCCCCATTTGTATTTCACTACTTTCCTGTTGAGCTaGGATTCCAGCCTCAAATTCCGCGATTTGGCCGGCATCCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: EPCFPHLYFTTFLLS*DSSLKFRDLAGILI Trigger: GATTAGGATGCCGGCCAAATCGCGGAATTTGAGGCTGGAATCCAAGCTCAACAGGAAAGTAGTGAAATACAAATGGGGAAAACAGGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS CAA 72 bp | TTTCCCCATTTGTATTTCACTACTTTCCTGTTGAGCTaGGATTCCAGCCTCAAATTCCGCGATTTGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: FPHLYFTTFLLS*DSSLKFRDLAG Trigger: GCCGGCCAAATCGCGGAATTTGAGGCTGGAATCCAAGCTCAACAGGAAAGTAGTGAAATACAAATGGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 72 bp | GTCTCTTCCTCTTTGCTCCTGACTAGAATTTGCATGTaGTTCCTGGAATTCCAGCAGCCATCTCGTAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSSSLLLTRICM*FLEFQQPSRKH Trigger: ATGCTTACGAGATGGCTGCTGGAATTCCAGGAATCACATGCAAATTCTAGTCAGGAGCAAAGAGGAAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | ATCTTAACACACACGAGATGCCTTGTCTTCATTTCGTaGACAGGCAAGGCCGAATTCCGTTTCACAGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILTHTRCLVFIS*TGKAEFRFTDR Trigger: TCTATCTGTGAAACGGAATTCGGCCTTGCCTGTCCACGAAATGAAGACAAGGCATCTCGTGTGTGTTAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 72 bp | ACTTCTTTCCCCACAGTTCTCTATAGAGCTCTGTTATaGACTAGACACTGTTCCTGGTGCTGGGGATTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TSFPTVLYRALL*TRHCSWCWGFR Trigger: TCTAAATCCCCAGCACCAGGAACAGTGTCTAGTTCATAACAGAGCTCTATAGAGAACTGTGGGGAAAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 72 bp | TTGCTAAGATCTTGTTTCATCTTAACACACACGAGATaGCTTGTCTTCATTTCGTGGACAGGCAAGGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRSCFILTHTR*LVFISWTGKAE Trigger: TTCGGCCTTGCCTGTCCACGAAATGAAGACAAGGCATCTCGTGTGTGTTAAGATGAAACAAGATCTTAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS GCA 72 bp | TTTATGTACTCATTAGGTCCTTCAACCCTTCTTCAGTaGCTACTTTCTGTGTGCCACGTACTGAGATGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FMYSLGPSTLLQ*LLSVCHVLRCQ Trigger: TTGGCATCTCAGTACGTGGCACACAGAAAGTAGGCACTGAAGAAGGGTTGAAGGACCTAATGAGTACATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 72 bp | GGGTTCCAAAGCCCCGTTTCTCTCCTAGTTCTTTCTTaGCTCAAGAAAAGCAGCTTGTCTGATAAACTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GFQSPVSLLVLS*LKKSSLSDKLS Trigger: GCTTAGTTTATCAGACAAGCTGCTTTTCTTGAGCAAAGAAAGAACTAGGAGAGAAACGGGGCTTTGGAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 72 bp | TCTGGTTCGAACACCTCTGACAGCTGCCCGACAATGTaGATGTACTTAATGCCACTGAACTTACAAATGATT | + |
|
Preference number: 6 (lower is better) Translates to: SGSNTSDSCPTM*MYLMPLNLQMI Trigger: AATCATTTGTAAGTTCAGTGGCATTAAGTACATTCACATTGTCGGGCAGCTGTCAGAGGTGTTCGAACCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS TCA 72 bp | GGTCTGGATTTAGTTGCTTGCAGCCAAGGTCATCTATaGTCTAATGTCTTCAGACCATTCACCAGAGTACTA | + |
|
Preference number: 6 (lower is better) Translates to: GLDLVACSQGHL*SNVFRPFTRVL Trigger: TAGTACTCTGGTGAATGGTCTGAAGACATTAGATCATAGATGACCTTGGCTGCAAGCAACTAAATCCAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CAA 72 bp | TATTTTTCATCGTTCTGCAACACACCTTTCCCTTCCTaGGGATATTTCTCCTCTTTCAGCATTGCCGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: YFSSFCNTPFPS*GYFSSFSIAAS Trigger: TGATGCGGCAATGCTGAAAGAGGAGAAATATCCCAAGGAAGGGAAAGGTGTGTTGCAGAACGATGAAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662214.1 |
||
| CDS TCA 72 bp | ACAGTACGACTATTCCTCCAAAATAGATTTACCCTATaGTCCAGCAATTCCGTTTCTGGATGTGTACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TVRLFLQNRFTL*SSNSVSGCVPQ Trigger: TTGGGGTACACATCCAGAAACGGAATTGCTGGATCATAGGGTAAATCTATTTTGGAGGAATAGTCGTACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS TCA 72 bp | AATCATCCAGTGGATGATGGAAGGATCATGGGACACTaGTATCATTTGGGTACACATTGTACTTGTTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: NHPVDDGRIMGH*YHLGTHCTCLV Trigger: AACCAAACAAGTACAATGTGTACCCAAATGATATCAGTGTCCCATGATCCTTCCATCATCCACTGGATGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS GCA 72 bp | GGTCTTAATCTGACCACCATGAGTCTGAATTCCCTTTaGCCTTCATCCTTGTATTCACCAGTCATATTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLNLTTMSLNSL*PSSLYSPVILK Trigger: TTTTAATATGACTGGTGAATACAAGGATGAAGGGCAAAGGGAATTCAGACTCATGGTGGTCAGATTAAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000558307.1 ENST00000560282.1 ENST00000647665.1 ENST00000662214.1 |
||
| CDS CCA 72 bp | TTGGGTACACATTGTACTTGTTTGGTTAACCCTATTTaGATAAACTGTTGTGGTCTGGATTTAGTTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGTHCTCLVNPI*INCCGLDLVAC Trigger: GCAAGCAACTAAATCCAGACCACAACAGTTTATCCAAATAGGGTTAACCAAACAAGTACAATGTGTACCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||
| CDS CCA 72 bp | TGGATGATGGAAGGATCATGGGACACTGATATCATTTaGGTACACATTGTACTTGTTTGGTTAACCCTATTT | + |
|
Preference number: 6 (lower is better) Translates to: WMMEGSWDTDII*VHIVLVWLTLF Trigger: AAATAGGGTTAACCAAACAAGTACAATGTGTACCCAAATGATATCAGTGTCCCATGATCCTTCCATCATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647665.1 |
||