Pregenerated sensors for SPATA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000150628Ensembl transcript IDs: ENST00000280191.7, ENST00000508699.1, ENST00000515234.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTATTGAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATaGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGT | + |
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Preference number: 1 (lower is better) Translates to: IIEIHPILGDSVSLL*LEMVASLLQSHLTG Trigger: ACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTCAATAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| 3UTR-3UTR TCA 90 bp | AAACCTCTTCTATCAATATTTCAGGCACTCCAGCTTTACAATGAATTGTTCCATCCCAGTTATCCAACTTaGCTTTTAAAGAGGTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: KPLLSIFQALQLYNELFHPSYPT*LLKRSR Trigger: ACGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGG...ATGGAACAATTCATTGTAAAGCTGGAGTGCCTGAAATATTGATAGAAGAGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508699.1 |
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| 3UTR-3UTR GCA 90 bp | AAACCTCTTCTATCAATATTTCAGGCACTCCAGCTTTACAATGAATTGTTCCATGAACTTCTCCAACTGTaGCCAGTTATCCAACTTGAC | + |
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Preference number: 2 (lower is better) Translates to: KPLLSIFQALQLYNELFHELLQL*PVIQLD Trigger: GTCAAGTTGGATAACTGGGCACAGTTGGAGAAGTTC...ATGGAACAATTCATTGTAAAGCTGGAGTGCCTGAAATATTGATAGAAGAGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508699.1 |
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| 3UTR TCA 72 bp | CCAGGAACTTCTCCAACTGTGCCCAGTTATCCAACTTaGCTTTTAAAGAGGTCCCGTTTTCAAAGGATGATA | + |
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Preference number: 3 (lower is better) Translates to: PGTSPTVPSYPT*LLKRSRFQRMI Trigger: TATCATCCTTTGAAAACGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGGCACAGTTGGAGAAGTTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508699.1 |
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| CDS-3UTR TCA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTGGCCGGCGGCAGCCATaGCGCTTTCTGGGTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLWLEMVASLLQSHLTGAGRRQP*RFLGCC Trigger: GCAGCAACCCAGAAAGCGTCATGGCTGCCGCCGGCC...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280191.7 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCCCACCTAGGCTGGAGTaGAGCGGCATAATCTCGACT | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCPPRLE*SGIIST Trigger: AGTCGAGATTATGCCGCTGCACTCCAGCCTAGGTGG...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTGCTTGGGCAGGAAGGTaGTTGAGAGTAACTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LLWLEMVASLLQSHLTGAAWAGR*LRVTSP Trigger: GGGAGAAGTTACTCTCAATCACCTTCCTGCCCAAGC...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCAAAGCATTCTCCTGCCTaGAGCCTCCCCAGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVAKHSPA*SLPSSW Trigger: CCAGCTACTGGGGAGGCTGCAGGCAGGAGAATGCTT...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCACTGAGATCCAGACCCTaGAGCCAACGCAGAACGGAA | + |
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Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVALRSRP*SQRRTE Trigger: TTCCGTTCTGCGTTGGCTTCAGGGTCTGGATCTCAG...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280191.7 |
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| CDS-3UTR TCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGTCCTGGGGAAGAAGCTaGGATCCAGACCCTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVSWGRS*DPDPEA Trigger: GGCTTCAGGGTCTGGATCTCAGCTTCTTCCCCAGGA...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280191.7 |
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| CDS-3UTR TCA 90 bp | AAGTGTAAACCTCTTCTATCAATATTTCAGGCACTCCAGCTTTACAATGAATTGTCCTGGGGAAGAAGCTaGGATCCAGACCCTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: KCKPLLSIFQALQLYNELSWGRS*DPDPEA Trigger: GGCTTCAGGGTCTGGATCTCAGCTTCTTCCCCAGGA...CAATTCATTGTAAAGCTGGAGTGCCTGAAATATTGATAGAAGAGGTTTACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508699.1 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTGTAGTATCCACAGTTaGCATCCACTGGGGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCCSIHS*HPLGIL Trigger: CAAGATCCCCAGTGGATGGCAACTGTGGATACTACA...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCAACTGTACAGTGTGGTaGGCTTGTGTGCAAAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCNCTVW*ACVQSA Trigger: TGCACTTTGCACACAAGCGCACCACACTGTACAGTT...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | AAACCTCTTCTATCAATATTTCAGGCACTCCAGCTTTACAATGAATTGTTCCATCTGAGATCCAGACCCTaGAGCCAACGCAGAACGGAA | + |
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Preference number: 4 (lower is better) Translates to: KPLLSIFQALQLYNELFHLRSRP*SQRRTE Trigger: TTCCGTTCTGCGTTGGCTTCAGGGTCTGGATCTCAG...ATGGAACAATTCATTGTAAAGCTGGAGTGCCTGAAATATTGATAGAAGAGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508699.1 |
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| CDS-3UTR GCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGCTGCCTGCTCTGTGTTaGCTAGGATGTGAGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVLPALC*LGCESS Trigger: GGAGGACTCACATCCTAGGCAACACAGAGCAGGCAG...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR CCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGAAATACCCTTTTTCCTaGCCGGCGGCAGCCATGACG | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVKYPFS*PAAAMT Trigger: CGTCATGGCTGCCGCCGGCCAGGAAAAAGGGTATTT...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280191.7 |
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| CDS-3UTR TCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTTGAAAAATCTCTGTTaGTGTTCCTGGGGAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCLKNLC*CSWGRS Trigger: GCTTCTTCCCCAGGAACATCAACAGAGATTTTTCAA...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280191.7 |
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| CDS-3UTR TCA 90 bp | TGTGCCCAGTTATCCAACTTGACTTTTAAAGAGGTCCCGTTTTCAAAGGATGATCCCAGTTATCCAACTTaGCTTTTAAAGAGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: CAQLSNLTFKEVPFSKDDPSYPT*LLKRSR Trigger: ACGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGG...ATCATCCTTTGAAAACGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508699.1 |
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| CDS-3UTR TCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCGGTAGCTATAGTCCGTaGAATTCACAAAGTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCGSYSP*NSQSHP Trigger: AGGATGACTTTGTGAATTTCACGGACTATAGCTACC...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCTTGGGCAGGAAGGTaGTTGAGAGTAACTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVAWAGR*LRVTSP Trigger: GGGAGAAGTTACTCTCAATCACCTTCCTGCCCAAGC...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCCATCACACCTCAAACTaGAAAACTTTCAGCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCHHTSN*KTFSHS Trigger: ACTGTGGCTGAAAGTTTTTCAGTTTGAGGTGTGATG...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCAACTCTCAAACTAGATaGCATCTCCGACAAAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCNSQTR*HLRQRV Trigger: TACCCTTTGTCGGAGATGGCATCTAGTTTGAGAGTT...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCACGCTTGTGTGCAAAGTaGAAGAGCAGTGATGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVARLCAK*KSSDAG Trigger: ACCAGCATCACTGCTCTTGCACTTTGCACACAAGCG...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR CCA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTCAGTTTCAGTTACCTTaGGTCAATCACAGTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLWLEMVASLLQSHLTGAQFQLP*VNHSRK Trigger: TTTCCGACTGTGATTGACCCAAGGTAACTGAAACTG...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCATGTATTTCTCTATGTaGACTGCCACCACTACCTAT | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCMYFSM*TATTTY Trigger: ATAGGTAGTGGTGGCAGTTCACATAGAGAAATACAT...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTTCTTCAAAGCCATTTaGCAGGTGCTTTTCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCFFKAI*QVLFKV Trigger: AACCTTGAAAAGCACCTGTCAAATGGCTTTGAAGAA...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTAAGTATCTTGTAAAGTaGGTGTTGTTGGATCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LLWLEMVASLLQSHLTGAKYLVK*VLLDRC Trigger: GCAACGATCCAACAACACTCACTTTACAAGATACTT...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCAAGCCATTTGACAGGTaGTTTTCAAGGTTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCKPFDR*FSRFLV Trigger: GACAAGAAACCTTGAAAAGCACCTGTCAAATGGCTT...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTAAGCCATTTGACAGGTaGTTTTCAAGGTTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLWLEMVASLLQSHLTGAKPFDR*FSRFLV Trigger: GACAAGAAACCTTGAAAAGCACCTGTCAAATGGCTT...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR CCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCCATTGGTCAGCATGTTaGGATTGCTTAGTAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCHWSAC*DCLVIL Trigger: CAGAATTACTAAGCAATCCCAACATGCTGACCAATG...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR CCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCAACTTCTCCCACTGTTaGTTTCACATCAAACCATTC | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCNFSHC*FHIKPF Trigger: GAATGGTTTGATGTGAAACCAACAGTGGGAGAAGTT...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR CCA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTACGTTTCAAAGGCTTTaGTGTTCTTTTGATGAACCC | + |
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Preference number: 4 (lower is better) Translates to: LLWLEMVASLLQSHLTGATFQRL*CSFDEP Trigger: GGGTTCATCAAAAGAACACCAAAGCCTTTGAAACGT...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCACCCAGTTATCCAACTTaGCTTTTAAAGAGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVAPSYPT*LLKRSR Trigger: ACGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGG...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTCATTTGAAAAATCTCTaGTCCGTGGCAATTAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLWLEMVASLLQSHLTGAHLKNL*SVAIRK Trigger: TTTCCTAATTGCCACGGATCAGAGATTTTTCAAATG...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCAGAACTTCTCCAACTGTaGCCAGTTATCCAACTTGAC | + |
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Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVAELLQL*PVIQLD Trigger: GTCAAGTTGGATAACTGGGCACAGTTGGAGAAGTTC...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTCAGCATGTTGGGATTaGTTAGTAATTCTGATAACC | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCSACWD*LVILIT Trigger: GGTTATCAGAATTACTAAGCAATCCCAACATGCTGA...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCGAATGTTGTCCAGCTTaGTTCACATGTATTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCECCPA*FTCISL Trigger: TAGAGAAATACATGTGAAGCAAGCTGGACAACATTC...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCCTGGTGATTCAGATATaGCAGAGAGAAACCATAAAA | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCLVIQI*QRETIK Trigger: TTTTATGGTTTCTCTCTGGCATATCTGAATCACCAG...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGCCCAGTTATCCAACTTaGCTTTTAAAGAGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVPSYPT*LLKRSR Trigger: ACGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGG...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGAACTTCTCCAACTGTaGCCAGTTATCCAACTTGAC | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVELLQL*PVIQLD Trigger: GTCAAGTTGGATAACTGGGCACAGTTGGAGAAGTTC...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | AAGTGTAAACCTCTTCTATCAATATTTCAGGCACTCCAGCTTTACAATGAATTGGAACTTCTCCAACTGTaGCCAGTTATCCAACTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KCKPLLSIFQALQLYNELELLQL*PVIQLD Trigger: GTCAAGTTGGATAACTGGGCACAGTTGGAGAAGTTC...CAATTCATTGTAAAGCTGGAGTGCCTGAAATATTGATAGAAGAGGTTTACACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508699.1 |
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| CDS-3UTR GCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGCTTTTAAATTATATCTaGGCCCAGAGGCTTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVLLNYI*AQRLGQ Trigger: CTGCCCAAGCCTCTGGGCGCAGATATAATTTAAAAG...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGGATCTTGGAACCTATaGCTCTCTGATAAGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVGSWNL*LSDKER Trigger: TCTCTCCTTATCAGAGAGGCATAGGTTCCAAGATCC...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR GCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGTGTTGTTGGATCGTTaGTCTAAGGAGAACCTACTG | + |
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Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVVLLDR*SKENLL Trigger: CAGTAGGTTCTCCTTAGAGCAACGATCCAACAACAC...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR CCA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCAAGGAGAACCTACTGTaGAATTTTGCTAAGATTATC | + |
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Preference number: 4 (lower is better) Translates to: FIMARDGGITSSKPFDRCKENLL*NFAKII Trigger: GATAATCTTAGCAAAATTCCACAGTAGGTTCTCCTT...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
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| CDS-3UTR TCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCAATGTATTTCTCTATGTaGACTGCCACCACTACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVAMYFSM*TATTTY Trigger: ATAGGTAGTGGTGGCAGTTCACATAGAGAAATACAT...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCAAACTTCTCCCACTGTTaGTTTCACATCAAACCATTC | + |
|
Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVANFSHC*FHIKPF Trigger: GAATGGTTTGATGTGAAACCAACAGTGGGAGAAGTT...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR GCA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCAGAATGTTGTCCAGCTTaGTTCACATGTATTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IHPILGDSVSLLWLEMVAECCPA*FTCISL Trigger: TAGAGAAATACATGTGAAGCAAGCTGGACAACATTC...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGCATTGGTCAGCATGTTaGGATTGCTTAGTAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVHWSAC*DCLVIL Trigger: CAGAATTACTAAGCAATCCCAACATGCTGACCAATG...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR GCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGAGAGCAAATATTAGCTaGCAGTTACATACAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVRANIS*QLHTKC Trigger: GCACTTTGTATGTAACTGGCAGCTAATATTTGCTCT...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS-3UTR GCA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCTTATCTGCAGTTTTaGTTTCTGCAGTTTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EIHPILGDSVSLLWLEMVAYLQF*FLQFQL Trigger: TAACTGAAACTGCAGAAAGCAAAACTGCAGATAAGC...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTCTGCGCCCAGAGGCTaGGGCAGGAAGGTGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FIMARDGGITSSKPFDRCSAPRG*GRKVIE Trigger: CTCAATCACCTTCCTGCCCAAGCCTCTGGGCGCAGA...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCGAAAGTGACGGTGACTaGTCTAGGGCTGCCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIMARDGGITSSKPFDRCESDGD*SRAAAV Trigger: GACTGCGGCAGCCCTAGACAAGTCACCGTCACTTTC...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280191.7 |
||
| CDS-3UTR CAA 90 bp | TGTGCCCAGTTATCCAACTTGACTTTTAAAGAGGTCCCGTTTTCAAAGGATGATGAAAGTGACGGTGACTaGTCTAGGGCTGCCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CAQLSNLTFKEVPFSKDDESDGD*SRAAAV Trigger: GACTGCGGCAGCCCTAGACAAGTCACCGTCACTTTC...ATCATCCTTTGAAAACGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508699.1 |
||
| CDS GCA 90 bp | AGACATCAGTCACCTTTTAGTCATCAGATCAACTGTACAGTGTGGTaGGCTTGTGTGCAAAGTGCAAGAGCAGTGATGCTGGTGATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHQSPFSHQINCTVW*ACVQSARAVMLVIQ Trigger: CTGAATCACCAGCATCACTGCTCTTGCACTTTGCACACAAGCGCACCACACTGTACAGTTGATCTGATGACTAAAAGGTGACTGATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCATCTGCGCCCAGAGGCTaGGGCAGGAAGGTGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IHPILGDSVSLLWLEMVASAPRG*GRKVIE Trigger: CTCAATCACCTTCCTGCCCAAGCCTCTGGGCGCAGA...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS CCA 90 bp | TGTAGACATCAGTCACCTTTTAGTCATCAGATCAACTGTACAGTGTaGTGCGCTTGTGTGCAAAGTGCAAGAGCAGTGATGCTGGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: CRHQSPFSHQINCTV*CACVQSARAVMLVI Trigger: AATCACCAGCATCACTGCTCTTGCACTTTGCACACAAGCGCACCACACTGTACAGTTGATCTGATGACTAAAAGGTGACTGATGTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCGCCCAGTTATCCAACTaGACTTTTAAAGAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: FIMARDGGITSSKPFDRCAQLSN*TFKEVP Trigger: CGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGGC...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | GCCAGGAACTTCTCCAACTGTGCCCAGTTATCCAACTTGACTTTTAAAGAGGTCTACAGAATATTTCTGTaGATGTTCCTGGGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARNFSNCAQLSNLTFKEVYRIFL*MFLGKK Trigger: CTTCTTCCCCAGGAACATCAACAGAAATATTCTGTA...GACCTCTTTAAAAGTCAAGTTGGATAACTGGGCACAGTTGGAGAAGTTCCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508699.1 |
||
| CDS TCA 90 bp | TTAACTTTTAAATTATATCTGCGCCCAGAGGCTTGGGCAGGAAGGTaGTTGAGAGTAACTTCTCCCACTGTTGGTTTCACATCAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: LTFKLYLRPEAWAGR*LRVTSPTVGFTSNH Trigger: ATGGTTTGATGTGAAACCAACAGTGGGAGAAGTTACTCTCAATCACCTTCCTGCCCAAGCCTCTGGGCGCAGATATAATTTAAAAGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGTACAGTGTGGTGCGCTaGTGTGCAAAGTGCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EIHPILGDSVSLLWLEMVYSVVR*CAKCKS Trigger: GCTCTTGCACTTTGCACACAAGCGCACCACACTGTA...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTGTCAGCATGTTGGGATaGCTTAGTAATTCTGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLWLEMVASLLQSHLTGAVSMLG*LSNSDN Trigger: GTTATCAGAATTACTAAGCAATCCCAACATGCTGAC...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCGTCAGCATGTTGGGATaGCTTAGTAATTCTGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: FIMARDGGITSSKPFDRCVSMLG*LSNSDN Trigger: GTTATCAGAATTACTAAGCAATCCCAACATGCTGAC...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTCATTGGTCAGCATGTaGGGATTGCTTAGTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: FIMARDGGITSSKPFDRCSLVSM*GLLSNS Trigger: AGAATTACTAAGCAATCCCAACATGCTGACCAATGA...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTAGAATGTTGTCCAGCTaGCTTCACATGTATTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLWLEMVASLLQSHLTGARMLSS*LHMYFS Trigger: AGAGAAATACATGTGAAGCAAGCTGGACAACATTCT...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCTAGAGTAATAAGAATGTaGTCCAGCTTGCTTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: LLWLEMVASLLQSHLTGARVIRM*SSLLHM Trigger: CATGTGAAGCAAGCTGGACAACATTCTTATTACTCT...AGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | TTTATTATGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTTGACAGGTGCGCTTTTCAAGGTTTCTaGTCCATGTTTCTGATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FIMARDGGITSSKPFDRCAFQGF*SMFLIG Trigger: ACCTATCAGAAACATGGACAAGAAACCTTGAAAAGC...GCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCATAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | AAACCTCTTCTATCAATATTTCAGGCACTCCAGCTTTACAATGAATTGTTCCATGCCCAGTTATCCAACTaGACTTTTAAAGAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KPLLSIFQALQLYNELFHAQLSN*TFKEVP Trigger: CGGGACCTCTTTAAAAGTCAAGTTGGATAACTGGGC...ATGGAACAATTCATTGTAAAGCTGGAGTGCCTGAAATATTGATAGAAGAGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508699.1 |
||
| CDS-3UTR CAA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCACACCACTACCTATATTaGGTAAAACAGGGACAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IHPILGDSVSLLWLEMVAHHYLY*VKQGQL Trigger: GAGTTGTCCCTGTTTTACCAAATATAGGTAGTGGTG...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCACTTCTTCAAAGCCATTaGACAGGTGCTTTTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IHPILGDSVSLLWLEMVALLQSH*TGAFQG Trigger: ACCTTGAAAAGCACCTGTCAAATGGCTTTGAAGAAG...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | ATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCAAGAATGTTGTCCAGCTaGCTTCACATGTATTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IHPILGDSVSLLWLEMVARMLSS*LHMYFS Trigger: AGAGAAATACATGTGAAGCAAGCTGGACAACATTCT...TGCCACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGCTTCTTCAAAGCCATTaGACAGGTGCTTTTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EIHPILGDSVSLLWLEMVLLQSH*TGAFQG Trigger: ACCTTGAAAAGCACCTGTCAAATGGCTTTGAAGAAG...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGTTTGAAAAATCTCTGTaGATGTTCCTGGGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EIHPILGDSVSLLWLEMVFEKSL*MFLGKK Trigger: CTTCTTCCCCAGGAACATCAACAGAGATTTTTCAAA...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280191.7 |
||
| CDS-3UTR CAA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGTCATTGGTCAGCATGTaGGGATTGCTTAGTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: EIHPILGDSVSLLWLEMVSLVSM*GLLSNS Trigger: AGAATTACTAAGCAATCCCAACATGCTGACCAATGA...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGAGAGTAATAAGAATGTaGTCCAGCTTGCTTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: EIHPILGDSVSLLWLEMVRVIRM*SSLLHM Trigger: CATGTGAAGCAAGCTGGACAACATTCTTATTACTCT...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS-3UTR CAA 90 bp | GAAATACATCCAATACTAGGTGATTCTGTTTCTTTATTATGGCTAGAGATGGTGGCTTTTCAAGGTTTCTaGTCCATGTTTCTGATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EIHPILGDSVSLLWLEMVAFQGF*SMFLIG Trigger: ACCTATCAGAAACATGGACAAGAAACCTTGAAAAGC...CACCATCTCTAGCCATAATAAAGAAACAGAATCACCTAGTATTGGATGTATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS CCA 72 bp | AGGGCTGCCGCAGTCTGTGTCAAATACCCTTTTTCCTaGCCGGCGGCAGCCATGACGCTTTCTGGGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAAAVCVKYPFS*PAAAMTLSGLL Trigger: CAGCAACCCAGAAAGCGTCATGGCTGCCGCCGGCCAGGAAAAAGGGTATTTGACACAGACTGCGGCAGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280191.7 |
||
| CDS CAA 90 bp | CTCCCTCGGATGGGAGCTGCTAGCTGTGGCGAAAGTGACGGTGACTaGTCTAGGGCTGCCGCAGTCTGTGTCAAATACCCTTTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPRMGAASCGESDGD*SRAAAVCVKYPFSW Trigger: CCAGGAAAAAGGGTATTTGACACAGACTGCGGCAGCCCTAGACAAGTCACCGTCACTTTCGCCACAGCTAGCAGCTCCCATCCGAGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280191.7 |
||
| CDS GCA 72 bp | GGGCAGTCTGATGAAACCTCCCTGCCTGCTCTGTGTTaGCTAGGATGTGAGTCCTCCCTTTGTCCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQSDETSLPALC*LGCESSLCPES Trigger: AGACTCTGGACAAAGGGAGGACTCACATCCTAGGCAACACAGAGCAGGCAGGGAGGTTTCATCAGACTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS CAA 72 bp | ATGGGAGCTGCTAGCTGTGGCGAAAGTGACGGTGACTaGTCTAGGGCTGCCGCAGTCTGTGTCAAATACCCT | + |
|
Preference number: 6 (lower is better) Translates to: MGAASCGESDGD*SRAAAVCVKYP Trigger: AGGGTATTTGACACAGACTGCGGCAGCCCTAGACAAGTCACCGTCACTTTCGCCACAGCTAGCAGCTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000508699.1 |
||
| CDS GCA 72 bp | ATGTGTTCTGACAGAGGGTTCTGTAGTATCCACAGTTaGCATCCACTGGGGATCTTGGAACCTATGCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: MCSDRGFCSIHS*HPLGILEPMPL Trigger: GAGAGGCATAGGTTCCAAGATCCCCAGTGGATGGCAACTGTGGATACTACAGAACCCTCTGTCAGAACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS GCA 72 bp | GATCAACTGTACAGTGTGGTGCGCTTGTGTGCAAAGTaGAAGAGCAGTGATGCTGGTGATTCAGATATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DQLYSVVRLCAK*KSSDAGDSDMP Trigger: TGGCATATCTGAATCACCAGCATCACTGCTCTTGCACTTTGCACACAAGCGCACCACACTGTACAGTTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS TCA 72 bp | AAATTATATCTGCGCCCAGAGGCTTGGGCAGGAAGGTaGTTGAGAGTAACTTCTCCCACTGTTGGTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: KLYLRPEAWAGR*LRVTSPTVGFT Trigger: TGTGAAACCAACAGTGGGAGAAGTTACTCTCAATCACCTTCCTGCCCAAGCCTCTGGGCGCAGATATAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS GCA 72 bp | TCACCTTTTAGTCATCAGATCAACTGTACAGTGTGGTaGGCTTGTGTGCAAAGTGCAAGAGCAGTGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPFSHQINCTVW*ACVQSARAVML Trigger: CAGCATCACTGCTCTTGCACTTTGCACACAAGCGCACCACACTGTACAGTTGATCTGATGACTAAAAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS CCA 72 bp | CAGTCACCTTTTAGTCATCAGATCAACTGTACAGTGTaGTGCGCTTGTGTGCAAAGTGCAAGAGCAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: QSPFSHQINCTV*CACVQSARAVM Trigger: CATCACTGCTCTTGCACTTTGCACACAAGCGCACCACACTGTACAGTTGATCTGATGACTAAAAGGTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS CAA 72 bp | TGGCTAGAGATGGTGGCATCACTTCTTCAAAGCCATTaGACAGGTGCTTTTCAAGGTTTCTTGTCCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: WLEMVASLLQSH*TGAFQGFLSMF Trigger: AAACATGGACAAGAAACCTTGAAAAGCACCTGTCAAATGGCTTTGAAGAAGTGATGCCACCATCTCTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS CCA 72 bp | GGCAGGAAGGTGATTGAGAGTAACTTCTCCCACTGTTaGTTTCACATCAAACCATTCTGGATTCAATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRKVIESNFSHC*FHIKPFWIQFS Trigger: AGAAAATTGAATCCAGAATGGTTTGATGTGAAACCAACAGTGGGAGAAGTTACTCTCAATCACCTTCCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||
| CDS CAA 90 bp | GAGTGTTGTTGGATCGTTGCTCTAAGGAGAACCTACTGTGGAATTTaGCTAAGATTATCTACGTTTCAAAGGCTTTGGTGTTCTTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: ECCWIVALRRTYCGI*LRLSTFQRLWCSFD Trigger: ATCAAAAGAACACCAAAGCCTTTGAAACGTAGATAATCTTAGCAAAATTCCACAGTAGGTTCTCCTTAGAGCAACGATCCAACAACACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515234.1 |
||
| CDS CAA 72 bp | ATGAGGAACTCCGCTTTAAGTTCATTGGTCAGCATGTaGGGATTGCTTAGTAATTCTGATAACCTAATGTTA | + |
|
Preference number: 6 (lower is better) Translates to: MRNSALSSLVSM*GLLSNSDNLML Trigger: TAACATTAGGTTATCAGAATTACTAAGCAATCCCAACATGCTGACCAATGAACTTAAAGCGGAGTTCCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280191.7 ENST00000515234.1 |
||