RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPATA32 (Homo sapiens)

Ensembl gene IDs: ENSG00000184361

Ensembl transcript IDs: ENST00000331780.5, ENST00000586359.1, ENST00000588866.5

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCGTTGGTGGGGATGGCCTCCCGGAGCGGGGATCTGATGGGCTaGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGC +
Preference number: 1 (lower is better)
Translates to: RALVGMASRSGDLMG*PALPLLSCMLMARC
Trigger: GCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCCGCTCCGGGAGGCCATCCCCACCAACGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp GAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTaGTCCTCGGAGCACAGGGCGTTGGTGGGGATGGCCTCCCGGAGC +
Preference number: 1 (lower is better)
Translates to: ELVVGGAEWASGIWS*SSEHRALVGMASRS
Trigger: GCTCCGGGAGGCCATCCCCACCAACGCCCTGTGCTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp GCCTGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTaGAGCTGCTCCTCGGAGCACAGGGCGTTGGTGGGGATGGCCTCC +
Preference number: 1 (lower is better)
Translates to: AWELVVGGAEWASGI*SCSSEHRALVGMAS
Trigger: GGAGGCCATCCCCACCAACGCCCTGTGCTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp CGGAGCGGGGATCTGATGGGCTGGCCTGCGCTGCCATTGTTGAGCTaGATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCTGGATG +
Preference number: 1 (lower is better)
Translates to: RSGDLMGWPALPLLS*MLMARCRLCSEAWM
Trigger: CATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCCGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp GCGGGAGATCTGAGGACAGGAGGGGGCTTGGTGCCTGGGAGCTTGTaGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: AGDLRTGGGLVPGSL*LEELSGHQGSGAAP
Trigger: AGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCAGGCACCAAGCCCCCTCCTGTCCTCAGATCTCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp CCCTGCAGCAGAGGGGACGTGGCTGGTGGCTGGAGAAGCTGGATTTaGCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAGTCA +
Preference number: 1 (lower is better)
Translates to: PCSRGDVAGGWRSWI*PLMVALLIPGLLKS
Trigger: TGACTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCTCTGCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp TTGCTTCCCTGCAGCAGAGGGGACGTGGCTGGTGGCTGGAGAAGCTaGATTTGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTG +
Preference number: 1 (lower is better)
Translates to: LLPCSRGDVAGGWRS*ICPLMVALLIPGLL
Trigger: CAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCTCTGCTGCAGGGAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 90 bp AGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTaGTTTTCTGGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCT +
Preference number: 1 (lower is better)
Translates to: SGALASRGFSGRVSA*FSGSRSSTVVRRGS
Trigger: AGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp GCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTaGGCAGGTCCATCCTGCTGGAGGAGGCCATGGCCAGGGAAGATG +
Preference number: 1 (lower is better)
Translates to: APEPPGVELSSCVPN*AGPSCWRRPWPGKM
Trigger: CATCTTCCCTGGCCATGGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp TCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTaGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCTGTGGAAGG +
Preference number: 1 (lower is better)
Translates to: SGFAWFLWQGLCVIF*LSLLHSGQEGLCGR
Trigger: CCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 90 bp ATGGCAGGCAGACACGTGGTTCTCCTCCGTGAAACTCCGGCAGTTTaGATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: MAGRHVVLLRETPAV*IQTPRSEGLWRGQP
Trigger: GGGCTGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGAGAACCACGTGTCTGCCTGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp GCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTaGTCTGAGGCCTGGATGAGCTTGTTTGCCCAGAAGAGGTGCTTG +
Preference number: 1 (lower is better)
Translates to: ALPLLSCMLMARCRL*SEAWMSLFAQKRCL
Trigger: CAAGCACCTCTTCTGGGCAAACAAGCTCATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp TTTCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTaGGTGATTTTCTGGCTCTCGCTCCTCCACAGTGGTCAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: FQWCSGFAWFLWQGL*VIFWLSLLHSGQEG
Trigger: CCCCTCCTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp TTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCTaGATGAGCTTGTTTGCCCAGAAGAGGTGCTTGGAGGTCTGCGCA +
Preference number: 1 (lower is better)
Translates to: LSCMLMARCRLCSEA*MSLFAQKRCLEVCA
Trigger: TGCGCAGACCTCCAAGCACCTCTTCTGGGCAAACAAGCTCATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp AGTGGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCTCCTGGGGTaGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCT +
Preference number: 1 (lower is better)
Translates to: SGQEGLCGRLQSLLG*SFHHVFQTGQVHPA
Trigger: AGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 90 bp TTGTTTGCCCAGAAGAGGTGCTTGGAGGTCTGCGCACTGATGGAGTaGTGGCAGGCAGACACGTGGTTCTCCTCCGTGAAACTCCGGCAG +
Preference number: 1 (lower is better)
Translates to: LFAQKRCLEVCALME*WQADTWFSSVKLRQ
Trigger: CTGCCGGAGTTTCACGGAGGAGAACCACGTGTCTGCCTGCCATCACTCCATCAGTGCGCAGACCTCCAAGCACCTCTTCTGGGCAAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 90 bp GGTCCATCCTGCTGGAGGAGGCCATGGCCAGGGAAGATGCAAAGGTaGTTAGCTCTGTCAGGTCAATGGGTGGCGGGAGATCTGAGGACA +
Preference number: 1 (lower is better)
Translates to: GPSCWRRPWPGKMQR*LALSGQWVAGDLRT
Trigger: TGTCCTCAGATCTCCCGCCACCCATTGACCTGACAGAGCTAATCACCTTTGCATCTTCCCTGGCCATGGCCTCCTCCAGCAGGATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp TCTGGGTCTGGGTCCAGGTCCAGGTCCACTTGGAGTTGGGGCTTCTaGTCTAGCATGTCTGCCTCCAGCTCCTGTTCCTCTTGTATCTGG +
Preference number: 1 (lower is better)
Translates to: SGSGSRSRSTWSWGF*SSMSASSSCSSCIW
Trigger: CCAGATACAAGAGGAACAGGAGCTGGAGGCAGACATGCTAGAGCAGAAGCCCCAACTCCAAGTGGACCTGGACCTGGACCCAGACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR TCA 90 bp ACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTaGGGGCTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTC +
Preference number: 1 (lower is better)
Translates to: TPRSSWLPCPAQLQA*GLGIALTPVKPAPV
Trigger: GACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp CTCCACGGTCTGAAGGTCTGTGGCGTGGGCAGCCCCATGTTGGAGTaGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAG +
Preference number: 1 (lower is better)
Translates to: LHGLKVCGVGSPMLE*TDSILHTSCMGSSK
Trigger: CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGACCTTCAGACCGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 90 bp GCCCAGTTGGCCACGGCTCTCCTCTCACAGATGAGGAAACGTGTATaGGGTCATGCAGCTATTAAGAGCAGCACACGACCCAAAGGCAGG +
Preference number: 1 (lower is better)
Translates to: AQLATALLSQMRKRV*GHAAIKSSTRPKGR
Trigger: CCTGCCTTTGGGTCGTGTGCTGCTCTTAATAGCTGCATGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGCCAACTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR GCA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTaGATACCAGCTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCG +
Preference number: 1 (lower is better)
Translates to: SVAWAAPCWSGRTLS*IPAAWVLQSQTPRS
Trigger: CGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp GGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTaGATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCC +
Preference number: 1 (lower is better)
Translates to: GSPMLEWTDSILHTS*MGSSKSDSSFELAS
Trigger: GGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp CTTGTCTTCCTGACTCCAAGATTTCAGTGGTGCTCTGGCTTCGCGTaGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTC +
Preference number: 1 (lower is better)
Translates to: LVFLTPRFQWCSGFA*FLWQGLCVIFWLSL
Trigger: GAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGTCAGGAAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp GCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATaGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGT +
Preference number: 1 (lower is better)
Translates to: APCWSGRTLSCIPAA*VLQSQTPRSSWLPC
Trigger: ACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 90 bp AGTGGGACCACTGCAACTATGTCCCCCTCCAACCTGGATTTTCAATaGCCTCAGAGTGAGCCTGCTACATCTCACTTGTCTCCGGTTACC +
Preference number: 1 (lower is better)
Translates to: SGTTATMSPSNLDFQ*PQSEPATSHLSPVT
Trigger: GGTAACCGGAGACAAGTGAGATGTAGCAGGCTCACTCTGAGGTCATTGAAAATCCAGGTTGGAGGGGGACATAGTTGCAGTGGTCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 90 bp GAGCGAAGTTCTTGTCTTCCTGACTCCAAGATTTCAGTGGTGCTCTaGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTG +
Preference number: 1 (lower is better)
Translates to: ERSSCLPDSKISVVL*LRVVSLAGSLRDFL
Trigger: CAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGTCAGGAAGACAAGAACTTCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp GTAAGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGATTTCAGTaGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTG +
Preference number: 1 (lower is better)
Translates to: VRLSEVLVFLTPRFQ*CSGFAWFLWQGLCV
Trigger: CACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 90 bp AGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGATTTCAGTGGTaGTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATT +
Preference number: 1 (lower is better)
Translates to: RLSEVLVFLTPRFQW*SGFAWFLWQGLCVI
Trigger: AATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 90 bp AGAGCAGCACACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTaGGATGCTACTCACTGCACTGTCTTAAATCTCTTTAGTCTTCCA +
Preference number: 1 (lower is better)
Translates to: RAAHDPKAGLAGSKL*DATHCTVLNLFSLP
Trigger: TGGAAGACTAAAGAGATTTAAGACAGTGCAGTGAGTAGCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR TCA 90 bp TCACTTGTCTCCGGTTACCCCCAGACTCCATGTGGCCTCTTGGTCTaGTCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTCCTGT +
Preference number: 1 (lower is better)
Translates to: SLVSGYPQTPCGLLV*SLPSFFISWHPASC
Trigger: ACAGGAAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCACATGGAGTCTGGGGGTAACCGGAGACAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR GCA 90 bp GTTGACTTAAGTCATCTCGCATCTCTGCAACCTCCACTGACCCTTTaGCGCAGCATGGAAATCCATGGGCACCCTTTTTCTATGTTGTTG +
Preference number: 1 (lower is better)
Translates to: VDLSHLASLQPPLTL*RSMEIHGHPFSMLL
Trigger: CAACAACATAGAAAAAGGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAGATGCGAGATGACTTAAGTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 90 bp ACATCTCACTTGTCTCCGGTTACCCCCAGACTCCATGTGGCCTCTTaGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTT +
Preference number: 1 (lower is better)
Translates to: TSHLSPVTPRLHVAS*SDLYLHFSSLGIQL
Trigger: AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCACATGGAGTCTGGGGGTAACCGGAGACAAGTGAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 90 bp TTTAGTCTTCCAGTGGGACCACTGCAACTATGTCCCCCTCCAACCTaGATTTTCAATGACCTCAGAGTGAGCCTGCTACATCTCACTTGT +
Preference number: 1 (lower is better)
Translates to: FSLPVGPLQLCPPPT*IFNDLRVSLLHLTC
Trigger: ACAAGTGAGATGTAGCAGGCTCACTCTGAGGTCATTGAAAATCCAGGTTGGAGGGGGACATAGTTGCAGTGGTCCCACTGGAAGACTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CAA 90 bp GCCTCCCGGAGCGGGGATCTGATGGGCTGGCCTGCGCTGCCATTGTaGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: ASRSGDLMGWPALPL*SCMLMARCRLCSEA
Trigger: GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCCGCTCCGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp ATGGCCTCCCGGAGCGGGGATCTGATGGGCTGGCCTGCGCTGCCATaGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: MASRSGDLMGWPALP*LSCMLMARCRLCSE
Trigger: CTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCCGCTCCGGGAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp GGAGATCTGAGGACAGGAGGGGGCTTGGTGCCTGGGAGCTTGTGGTaGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGG +
Preference number: 2 (lower is better)
Translates to: GDLRTGGGLVPGSLW*EELSGHQGSGAAPR
Trigger: CCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCAGGCACCAAGCCCCCTCCTGTCCTCAGATCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp GGGGATCTGATGGGCTGGCCTGCGCTGCCATTGTTGAGCTGCATGTaGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCTGGATGAGCTTG +
Preference number: 2 (lower is better)
Translates to: GDLMGWPALPLLSCM*MARCRLCSEAWMSL
Trigger: CAAGCTCATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR GCA 90 bp CTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCCCGGGAGGCAGACGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: LPLLSCMLMARCRLCSEAPGGRR*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACGTCTGCCTCCCGG...GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CAA 90 bp TCCCTGCAGCAGAGGGGACGTGGCTGGTGGCTGGAGAAGCTGGATTaGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: SLQQRGRGWWLEKLD*PFDGGPLDPRLAEV
Trigger: GACTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCTCTGCTGCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR TCA 90 bp GTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTGGGGTGGCGGGAGATCTaGGGACAGGAGGGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: VEGSRASWGGAFIMCSKLGWREI*GQEGAW
Trigger: CCAAGCCCCCTCCTGTCCTCAGATCTCCCGCCACCC...CAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CCA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCAAAGGCAGGTCTGGCTaGCTCCAAACTCTGGGATGC +
Preference number: 2 (lower is better)
Translates to: WPALPLLSCMLMARCRLCKGRSG*LQTLGC
Trigger: GCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTT...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp TGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCCGATCTCCAGTTCTaGGTCTGGGTCTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: WELVVGGAEWASGIWSCSSDLQF*VWVWVW
Trigger: CCAGACCCAGACCCAGACCCAGAACTGGAGATCGGA...GGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp ATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCTGGATGAGCTaGTTTGCCCAGAAGAGGTGCTTGGAGGTCTGCGCACTGATGGAG +
Preference number: 2 (lower is better)
Translates to: MLMARCRLCSEAWMS*FAQKRCLEVCALME
Trigger: CTCCATCAGTGCGCAGACCTCCAAGCACCTCTTCTGGGCAAACAAGCTCATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR TCA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGGCTCAGCTTCAAGCTTaGGGGCTGGGTATAGCTCTG +
Preference number: 2 (lower is better)
Translates to: LVVGGAEWASGIWSCSSEAQLQA*GLGIAL
Trigger: CAGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGC...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CCA 90 bp TGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCCCCCCAGACTCCATGTaGCCTCTTGGTCTGATCTCT +
Preference number: 2 (lower is better)
Translates to: WELVVGGAEWASGIWSCSPPDSM*PLGLIS
Trigger: AGAGATCAGACCAAGAGGCCACATGGAGTCTGGGGG...GGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp CTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTCCTCCACAGTGGTCAGACCCAAAGGCAGGTCTaGCTGGCTCCAAACTCTGGG +
Preference number: 2 (lower is better)
Translates to: LWQGLCVIFWLSLLHSGQTQRQV*LAPNSG
Trigger: CCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGT...CTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp GTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCCAGTTCTGGGTCTaGGTCTGGGTCTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: VLWLRVVSLAGSLRDFLALQFWV*VWVWVQ
Trigger: CTGGACCCAGACCCAGACCCAGACCCAGAACTGGAG...AGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CCA 90 bp GAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGACTCCTCGTTCGAGTTaGCTTCCGTGTCCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: ELVVGGAEWASGIWSCSSTPRSS*LPCPAQ
Trigger: CTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGT...CGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR GCA 90 bp TGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCCCTCCACTGACCCTTTaGCGCAGCATGGAAATCCAT +
Preference number: 2 (lower is better)
Translates to: WELVVGGAEWASGIWSCSPPLTL*RSMEIH
Trigger: ATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGG...GGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCAGCCCCATGTTGGAGTaGACGGACTCTATCTTGCAT +
Preference number: 2 (lower is better)
Translates to: WPALPLLSCMLMARCRLCSPMLE*TDSILH
Trigger: ATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCT...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGGGGCGTTGGTGGGGATaGCCTCCCGGAGCGGGGATC +
Preference number: 2 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLGRWWG*PPGAGI
Trigger: GATCCCCGCTCCGGGAGGCCATCCCCACCAACGCCC...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp GACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTaGAGGGCTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGT +
Preference number: 2 (lower is better)
Translates to: DSSFELASVSSSASS*RAGYSSDSSKAGTC
Trigger: ACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp TTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCAGCCCCATGTaGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCT +
Preference number: 2 (lower is better)
Translates to: FRLHGLKVCGVGSPM*EWTDSILHTSCMGS
Trigger: AGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR TCA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGCTCTCCTCTCACAGATaGGGAAACGTGTATGAGGTC +
Preference number: 2 (lower is better)
Translates to: LVVGGAEWASGIWSCSSELSSHR*GNVYEV
Trigger: GACCTCATACACGTTTCCTCATCTGTGAGAGGAGAG...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp CTCCAAGATTTCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCTCTGTCAGGTCAATaGGTGGCGGGAGATCTGAGG +
Preference number: 2 (lower is better)
Translates to: LQDFSGALASRGFSGRVSALSGQ*VAGDLR
Trigger: CCTCAGATCTCCCGCCACCCATTGACCTGACAGAGC...AGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAATCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp GTCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTaGCATACCAGCTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: VCGVGSPMLEWTDSI*HTSCMGSSKSDSSF
Trigger: GAACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CCA 90 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCCGATCTCCAGTTCTaGGTCTGGGTCTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: CMGSSKSDSSFELASVSSSDLQF*VWVWVW
Trigger: CCAGACCCAGACCCAGACCCAGAACTGGAGATCGGA...GCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR GCA 90 bp GGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTGGAGTTGGGGCTTCTaGTCTAGCATGTCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: GSSKSDSSFELASVSSSAWSWGF*SSMSAS
Trigger: GGAGGCAGACATGCTAGAGCAGAAGCCCCAACTCCA...AGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR GCA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTGCCATTGTTGAGCTaGATGTTGATGGCCCGCTGC +
Preference number: 2 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKLPLLS*MLMARC
Trigger: GCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 90 bp CATACCAGCTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTaGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTGAGGGCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: HTSCMGSSKSDSSFE*ASVSSSASSLRAGY
Trigger: ATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR GCA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGATCTTGCATACCAGCTaGATGGGTTCTTCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: LVVGGAEWASGIWSCSSEILHTS*MGSSKS
Trigger: TGACTTTGAAGAACCCATGCAGCTGGTATGCAAGAT...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CCA 90 bp GTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTTGTCCCCCTCCAACCTaGATTTTCAATGACCTCAGA +
Preference number: 2 (lower is better)
Translates to: VLWLRVVSLAGSLRDFLACPPPT*IFNDLR
Trigger: TCTGAGGTCATTGAAAATCCAGGTTGGAGGGGGACA...AGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp GAATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCAGCCCCATGTTGGAGTGCATACCAGCTGCATaGGTTCTTCAAAGTCAGACT +
Preference number: 2 (lower is better)
Translates to: EFRLHGLKVCGVGSPMLECIPAA*VLQSQT
Trigger: AGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCA...CTCCAACATGGGGCTGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CCA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAAAGCCCCATGTTGGAGTaGACGGACTCTATCTTGCAT +
Preference number: 2 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKSPMLE*TDSILH
Trigger: ATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCT...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR TCA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAATCAATGACCTCAGAGTaGGCCTGCTACATCTCACTT +
Preference number: 2 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKSMTSE*ACYISL
Trigger: AAGTGAGATGTAGCAGGCTCACTCTGAGGTCATTGA...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR GCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGCTCTGGCAGGGTCTCTaGGTGATTTTCTGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLLWQGL*VIFWLS
Trigger: CGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAG...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR GCA 90 bp GATTTGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAGTCAAAGTACCAAGATTTCAGTGGTaGTCTGGCTTCGCGTGGTTT +
Preference number: 2 (lower is better)
Translates to: DLPFDGGPLDPRLAEVKVPRFQW*SGFAWF
Trigger: AAACCACGCGAAGCCAGAGCACCACTGAAATCTTGG...TACTTTGACTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR TCA 90 bp GCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTTGTGGCCTCTTGGTCTaGTCTCTACCTTCATTTTTC +
Preference number: 2 (lower is better)
Translates to: APCWSGRTLSCIPAAWVLCGLLV*SLPSFF
Trigger: GAAAAATGAAGGTAGAGATCAGACCAAGAGGCCACA...AAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCATTTTTCATCTCTTaGCATCCAGCTTCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: CMGSSKSDSSFELASVSSSFFIS*HPASCP
Trigger: GGGACAGGAAGCTGGATGCCAAGAGATGAAAAATGA...GCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR GCA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTTGGGATGCTACTCACTaGACTGTCTTAAATCTCTTT +
Preference number: 2 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFWDATH*TVLNLF
Trigger: AAAGAGATTTAAGACAGTGCAGTGAGTAGCATCCCA...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR TCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGAACCTGGATTTTCAATaGCCTCAGAGTGAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLNLDFQ*PQSEPA
Trigger: AGCAGGCTCACTCTGAGGTCATTGAAAATCCAGGTT...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGCTCCATGTGGCCTCTTaGTCTGATCTCTACCTTCAT +
Preference number: 2 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLLHVAS*SDLYLH
Trigger: ATGAAGGTAGAGATCAGACCAAGAGGCCACATGGAG...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGTCTTTAGTCTTCCAGTaGGACCACTGCAACTATGTC +
Preference number: 2 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLSLVFQ*DHCNYV
Trigger: GACATAGTTGCAGTGGTCCCACTGGAAGACTAAAGA...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGCAGCATGGAAATCCATaGGCACCCTTTTTCTATGTT +
Preference number: 2 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLQHGNP*APFFYV
Trigger: AACATAGAAAAAGGGTGCCCATGGATTTCCATGCTG...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 72 bp CGGCACCTGTCCGATCTCCAGTTCTGGGTCTGGGTCTaGGTCTGGGTCCAGGTCCAGGTCCACTTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: RHLSDLQFWVWV*VWVQVQVHLEL
Trigger: CAACTCCAAGTGGACCTGGACCTGGACCCAGACCCAGACCCAGACCCAGAACTGGAGATCGGACAGGTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 72 bp GATCTGATGGGCTGGCCTGCGCTGCCATTGTTGAGCTaGATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAG +
Preference number: 3 (lower is better)
Translates to: DLMGWPALPLLS*MLMARCRLCSE
Trigger: CTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 72 bp AGAGGGGACGTGGCTGGTGGCTGGAGAAGCTGGATTTaGCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTG +
Preference number: 3 (lower is better)
Translates to: RGDVAGGWRSWI*PLMVALLIPGL
Trigger: CAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 72 bp GCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTaGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: AWFLWQGLCVIF*LSLLHSGQEGL
Trigger: GAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CAA 90 bp GTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTGCCGAGATGGTGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: VLWLRVVSLAGSLRDFLAAEMVP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCACCATCTCGGC...AGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CAA 90 bp GATTTGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAGTCAAAGTATCGGAGCACAGGGCGTaGGTGGGGATGGCCTCCCGG +
Preference number: 3 (lower is better)
Translates to: DLPFDGGPLDPRLAEVKVSEHRA*VGMASR
Trigger: CCGGGAGGCCATCCCCACCAACGCCCTGTGCTCCGA...TACTTTGACTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 72 bp GGGTCCAGGTCCAGGTCCACTTGGAGTTGGGGCTTCTaGTCTAGCATGTCTGCCTCCAGCTCCTGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: GSRSRSTWSWGF*SSMSASSSCSS
Trigger: AGAGGAACAGGAGCTGGAGGCAGACATGCTAGAGCAGAAGCCCCAACTCCAAGTGGACCTGGACCTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 72 bp TCTCTGCGTGATTTTCTGGCTCTCGCTCCTCCACAGTaGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCT +
Preference number: 3 (lower is better)
Translates to: SLRDFLALAPPQ*SGGALWKAPEP
Trigger: AGGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 72 bp GCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTaGAGGCTGTGCTCTGAGGCCTGGATGAGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: ALPLLSCMLMAR*RLCSEAWMSLF
Trigger: AAACAAGCTCATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 72 bp TGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTaGGTGATTTTCTGGCTCTCGCTCCTCCACAGTGGT +
Preference number: 3 (lower is better)
Translates to: CSGFAWFLWQGL*VIFWLSLLHSG
Trigger: ACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 72 bp CTGAAGGTCTGTGGCGTGGGCAGCCCCATGTTGGAGTaGACGGACTCTATCTTGCATACCAGCTGCATGGGT +
Preference number: 3 (lower is better)
Translates to: LKVCGVGSPMLE*TDSILHTSCMG
Trigger: ACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGACCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 72 bp ATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCTaGATGAGCTTGTTTGCCCAGAAGAGGTGCTTGGAG +
Preference number: 3 (lower is better)
Translates to: MLMARCRLCSEA*MSLFAQKRCLE
Trigger: CTCCAAGCACCTCTTCTGGGCAAACAAGCTCATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CAA 90 bp GGGCTGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTTTCATTTTTCATCTCTaGGCATCCAGCTTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: GLACAAIVELHVDGPLQAFIFHL*ASSFLS
Trigger: GGACAGGAAGCTGGATGCCAAGAGATGAAAAATGAA...AGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR GCA 72 bp TTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTaGTCTGAGGCCTGGATGAGCTTGTTTGCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: LLSCMLMARCRL*SEAWMSLFAQK
Trigger: CTTCTGGGCAAACAAGCTCATCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CAA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAAGCTCAGCTTCAAGCTaGAGGGCTGGGTATAGCTCT +
Preference number: 3 (lower is better)
Translates to: SVAWAAPCWSGRTLSCIPSSASS*RAGYSS
Trigger: AGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCT...TGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CAA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCTGGACGGACTCTATCTaGCATACCAGCTGCATGGGT +
Preference number: 3 (lower is better)
Translates to: GAFIMCSKLGRSILLEEAWTDSI*HTSCMG
Trigger: ACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCA...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 72 bp TCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTaGGGGCTGGGTATAGCTCTGACTCCAGTAAAGCCG +
Preference number: 3 (lower is better)
Translates to: SSWLPCPAQLQA*GLGIALTPVKP
Trigger: CGGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 72 bp TGGAGTGATGGCAGGCAGACACGTGGTTCTCCTCCGTaGAACTCCGGCAGTTTGAATTCAGACTCCACGGTC +
Preference number: 3 (lower is better)
Translates to: WSDGRQTRGSPP*NSGSLNSDSTV
Trigger: GACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGAGAACCACGTGTCTGCCTGCCATCACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 72 bp GTCCCCCTCCAACCTGGATTTTCAATGACCTCAGAGTaGGCCTGCTACATCTCACTTGTCTCCGGTTACCCC +
Preference number: 3 (lower is better)
Translates to: VPLQPGFSMTSE*ACYISLVSGYP
Trigger: GGGGTAACCGGAGACAAGTGAGATGTAGCAGGCTCACTCTGAGGTCATTGAAAATCCAGGTTGGAGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR TCA 72 bp GCCACGGCTCTCCTCTCACAGATGAGGAAACGTGTATaGGGTCATGCAGCTATTAAGAGCAGCACACGACCC +
Preference number: 3 (lower is better)
Translates to: ATALLSQMRKRV*GHAAIKSSTRP
Trigger: GGGTCGTGTGCTGCTCTTAATAGCTGCATGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR TCA 72 bp AGACACGTGGTTCTCCTCCGTGAAACTCCGGCAGTTTaGATTCAGACTCCACGGTCTGAAGGTCTGTGGCGT +
Preference number: 3 (lower is better)
Translates to: RHVVLLRETPAV*IQTPRSEGLWR
Trigger: ACGCCACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGAGAACCACGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 72 bp ATTAAGAGCAGCACACGACCCAAAGGCAGGTCTGGCTaGCTCCAAACTCTGGGATGCTACTCACTGCACTGT +
Preference number: 3 (lower is better)
Translates to: IKSSTRPKGRSG*LQTLGCYSLHC
Trigger: ACAGTGCAGTGAGTAGCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGCTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 72 bp CTGACTCCAAGATTTCAGTGGTGCTCTGGCTTCGCGTaGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGG +
Preference number: 3 (lower is better)
Translates to: LTPRFQWCSGFA*FLWQGLCVIFW
Trigger: CCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR GCA 72 bp AGTCATCTCGCATCTCTGCAACCTCCACTGACCCTTTaGCGCAGCATGGAAATCCATGGGCACCCTTTTTCT +
Preference number: 3 (lower is better)
Translates to: SHLASLQPPLTL*RSMEIHGHPFS
Trigger: AGAAAAAGGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAGATGCGAGATGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR GCA 72 bp GAAGTTCTTGTCTTCCTGACTCCAAGATTTCAGTGGTaGTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTC +
Preference number: 3 (lower is better)
Translates to: EVLVFLTPRFQW*SGFAWFLWQGL
Trigger: GAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGTCAGGAAGACAAGAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 72 bp CCAGTGGGACCACTGCAACTATGTCCCCCTCCAACCTaGATTTTCAATGACCTCAGAGTGAGCCTGCTACAT +
Preference number: 3 (lower is better)
Translates to: PVGPLQLCPPPT*IFNDLRVSLLH
Trigger: ATGTAGCAGGCTCACTCTGAGGTCATTGAAAATCCAGGTTGGAGGGGGACATAGTTGCAGTGGTCCCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR TCA 72 bp CCTATGCCCAGTTGGCCACGGCTCTCCTCTCACAGATaGGGAAACGTGTATGAGGTCATGCAGCTATTAAGA +
Preference number: 3 (lower is better)
Translates to: PMPSWPRLSSHR*GNVYEVMQLLR
Trigger: TCTTAATAGCTGCATGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGCCAACTGGGCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 72 bp CACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTaGGATGCTACTCACTGCACTGTCTTAAATCTCTTT +
Preference number: 3 (lower is better)
Translates to: HDPKAGLAGSKL*DATHCTVLNLF
Trigger: AAAGAGATTTAAGACAGTGCAGTGAGTAGCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 72 bp TGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATaGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGG +
Preference number: 3 (lower is better)
Translates to: WSGRTLSCIPAA*VLQSQTPRSSW
Trigger: CCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR-3UTR CAA 90 bp CCTTTGCCGCAGCATGGAAATCCATGGGCACCCTTTTTCTATGTTGTTGAATCTCCTGCTACATCTCACTaGTCTCCGGTTACCCCCAGA +
Preference number: 3 (lower is better)
Translates to: PLPQHGNPWAPFFYVVESPATSH*SPVTPR
Trigger: TCTGGGGGTAACCGGAGACAAGTGAGATGTAGCAGG...AGATTCAACAACATAGAAAAAGGGTGCCCATGGATTTCCATGCTGCGGCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR-3UTR CAA 90 bp TTATTGGTTCTGTCTAGTCATTTCTCTGGGATTGTGGGGGCTGACAGCTTAAAAGCCCAGAAGAGGTGCTaGGAGGTCTGCGCACTGATG +
Preference number: 3 (lower is better)
Translates to: LLVLSSHFSGIVGADSLKAQKRC*EVCALM
Trigger: CATCAGTGCGCAGACCTCCAAGCACCTCTTCTGGGC...TTTTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGACTAGACAGAACCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR TCA 72 bp TCTGCCTCCAGCTCCTGTTCCTCTTGTATCTGGTGTTaGCTTAAGTCATCTCGCATCTCTGCAACCTCCACT +
Preference number: 3 (lower is better)
Translates to: SASSSCSSCIWC*LKSSRISATST
Trigger: AGTGGAGGTTGCAGAGATGCGAGATGACTTAAGTCAACACCAGATACAAGAGGAACAGGAGCTGGAGGCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR GCA 72 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTaGATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAG +
Preference number: 3 (lower is better)
Translates to: MLEWTDSILHTS*MGSSKSDSSFE
Trigger: CTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CCA 72 bp TTGTCTCCGGTTACCCCCAGACTCCATGTGGCCTCTTaGTCTGATCTCTACCTTCATTTTTCATCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: LSPVTPRLHVAS*SDLYLHFSSLG
Trigger: GCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCACATGGAGTCTGGGGGTAACCGGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CCA 72 bp ACCTCCACTGACCCTTTGCCGCAGCATGGAAATCCATaGGCACCCTTTTTCTATGTTGTTGAATCTGATTGG +
Preference number: 3 (lower is better)
Translates to: TSTDPLPQHGNP*APFFYVVESDW
Trigger: CCAATCAGATTCAACAACATAGAAAAAGGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCAGGCGGGGAGCGGGCTaGTGGATGCTGCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: GSRSSTVVRRGSVEGSRARRGAG*WMLPLR
Trigger: GCGGAGAGGCAGCATCCACCAGCCCGCTCCCCGCCT...GGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCGGGTGGCGGGAGATCTaGGGACAGGAGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSRSSTVVRRGSVEGSRAGWREI*GQEGAW
Trigger: CCAAGCCCCCTCCTGTCCTCAGATCTCCCGCCACCC...GGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp CCTGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCCGGAGCGGGGATCTaGTGGGCTGGCCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PGSLWLEELSGHQGSGAAPGAGI*WAGLRC
Trigger: GCAGCGCAGGCCAGCCCATCAGATCCCCGCTCCGGG...AGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCGGGCGTTGGTGGGGATaGCCTCCCGGAGCGGGGATC +
Preference number: 4 (lower is better)
Translates to: WPALPLLSCMLMARCRLCGRWWG*PPGAGI
Trigger: GATCCCCGCTCCGGGAGGCCATCCCCACCAACGCCC...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 72 bp CGGAGCGGGGATCTGATGGGCTGGCCTGCGCTGCCATaGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSGDLMGWPALP*LSCMLMARCRL
Trigger: CAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCCGCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCGGGGATCTGATGGGCTaGCCTGCGCTGCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: GSRSSTVVRRGSVEGSRAGDLMG*PALPLL
Trigger: CAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCC...GGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGCGGAGCACAGGGCGTTaGTGGGGATGGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LVVGGAEWASGIWSCSSERSTGR*WGWPPG
Trigger: TCCGGGAGGCCATCCCCACCAACGCCCTGTGCTCCG...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GGGCTGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGGACAGGAGGGGGCTTaGTGCCTGGGAGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GLACAAIVELHVDGPLQAGQEGA*CLGACG
Trigger: ACCACAAGCTCCCAGGCACCAAGCCCCCTCCTGTCC...AGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGCGGGCTGGTGGATGCTaGCTCTCCGCCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ELVVGGAEWASGIWSCSSRAGGC*LSASSV
Trigger: CACACTGGAGGCGGAGAGGCAGCATCCACCAGCCCG...CGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTAGGCGGGGAGCGGGCTaGTGGATGCTGCCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: VLWLRVVSLAGSLRDFLARRGAG*WMLPLR
Trigger: GCGGAGAGGCAGCATCCACCAGCCCGCTCCCCGCCT...AGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCACCGAGGCTCTGTCCTaGAGGCGGGGAGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAFIMCSKLGRSILLEEATEALS*RRGAGW
Trigger: CCAGCCCGCTCCCCGCCTCCAGGACAGAGCCTCGGT...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGGGCGTTGGTGGGGATaGCCTCCCGGAGCGGGGATC +
Preference number: 4 (lower is better)
Translates to: SVAWAAPCWSGRTLSCIPGRWWG*PPGAGI
Trigger: GATCCCCGCTCCGGGAGGCCATCCCCACCAACGCCC...TGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGAGCACAGGGCGTTGGTaGGGATGGCCTCCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: WRGQPHVGVDGLYLAYQLSTGRW*GWPPGA
Trigger: CGCTCCGGGAGGCCATCCCCACCAACGCCCTGTGCT...CAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GGGCTGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTTGTGGTTGGAGGAGCTaGGTGGGCATCAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: GLACAAIVELHVDGPLQACGWRS*VGIRDL
Trigger: CAGATCCCTGATGCCCACTCAGCTCCTCCAACCACA...AGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCCACCTGTCACCCCCATaGAGACCGAGGCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WPALPLLSCMLMARCRLCHLSPP*RPRLCP
Trigger: AGGACAGAGCCTCGGTCTGCATGGGGGTGACAGGTG...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588866.5
CDS-3UTR GCA 90 bp GGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCTTTGCCCAGAAGAGGTaGTTGGAGGTCTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: GSRSSTVVRRGSVEGSRAFAQKR*LEVCAL
Trigger: CAGTGCGCAGACCTCCAAGCACCTCTTCTGGGCAAA...GGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp TGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTGGGCAGGTCCATCCTaGTGGAGGAGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: WELVVGGAEWASGIWSCSWAGPS*WRRPWP
Trigger: TGGCCATGGCCTCCTCCAGCAGGATGGACCTGCCCA...GGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGTGGGCAGGTCCATCCTaGTGGAGGAGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LVVGGAEWASGIWSCSSEWAGPS*WRRPWP
Trigger: TGGCCATGGCCTCCTCCAGCAGGATGGACCTGCCCA...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TGCCCAGTTGGCCACGGCTCTCCTCTCACAGATGAGGAAACGTGTATGAGGTCAGGGTGGCGGGAGATCTaGGGACAGGAGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CPVGHGSPLTDEETCMRSGWREI*GQEGAW
Trigger: CCAAGCCCCCTCCTGTCCTCAGATCTCCCGCCACCC...TGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGCCAACTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp GGGCTGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTTTTGCCCAGAAGAGGTaGTTGGAGGTCTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: GLACAAIVELHVDGPLQAFAQKR*LEVCAL
Trigger: CAGTGCGCAGACCTCCAAGCACCTCTTCTGGGCAAA...AGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGATGGGCTGGCCTaGGCTGCCATTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: WPALPLLSCMLMARCRLCSDGLA*AAIVEL
Trigger: CAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGA...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp AAGAGCAGCACACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTGGGATGCCAGGAGGGGGCTTGGTaGCTGGGAGCTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KSSTRPKGRSGWLQTLGCQEGAW*LGACGW
Trigger: CCAACCACAAGCTCCCAGGCACCAAGCCCCCTCCTG...GCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp AAGAGCAGCACACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTGGGATGCCCGGGAGGCAGACGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: KSSTRPKGRSGWLQTLGCPGGRR*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACGTCTGCCTCCCGG...GCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCCGGGGAGCGGGCTGGTaGATGCTGCCTCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: CMGSSKSDSSFELASVSSRGAGW*MLPLRL
Trigger: GAGGCGGAGAGGCAGCATCCACCAGCCCGCTCCCCG...GCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CCTGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTGGGGATCTGATGGGCTaGCCTGCGCTGCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: PGSLWLEELSGHQGSGAAGDLMG*PALPLL
Trigger: CAACAATGGCAGCGCAGGCCAGCCCATCAGATCCCC...AGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTGAGGGCTGGGTATAGCCGGAGCACAGGGCGTTaGTGGGGATGGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: FELASVSSSASSLRAGYSRSTGR*WGWPPG
Trigger: TCCGGGAGGCCATCCCCACCAACGCCCTGTGCTCCG...GCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGTGGGCATCAGGGATCTaGAGCTGCTCCTCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LVVGGAEWASGIWSCSSEWASGI*SCSSEH
Trigger: GTGCTCCGAGGAGCAGCTCCAGATCCCTGATGCCCA...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GCAGCACACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTGGGATGCTACTGGACAGGAGGGGGCTTaGTGCCTGGGAGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: AAHDPKAGLAGSKLWDATGQEGA*CLGACG
Trigger: ACCACAAGCTCCCAGGCACCAAGCCCCCTCCTGTCC...AGTAGCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCTTCGCGTGGTTTCTCTaGCAGGGTCTCTGCGTGATT +
Preference number: 4 (lower is better)
Translates to: GSRSSTVVRRGSVEGSRAFAWFL*QGLCVI
Trigger: AATCACGCAGAGACCCTGCCAGAGAAACCACGCGAA...GGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 72 bp CAGAGGGGACGTGGCTGGTGGCTGGAGAAGCTGGATTaGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: QRGRGWWLEKLD*PFDGGPLDPRL
Trigger: AAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCGGGCTGGTGGATGCTaGCTCTCCGCCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFRAGGC*LSASSV
Trigger: CACACTGGAGGCGGAGAGGCAGCATCCACCAGCCCG...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp CTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCTCTGATGGGCTGGCCTaGGCTGCCATTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPLLSCMLMARCRLCSEASDGLA*AAIVEL
Trigger: CAGCTCAACAATGGCAGCGCAGGCCAGCCCATCAGA...GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp CTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTCCTCCACAGTGGTCAGTGCCTGTCACCCCCATaGAGACCGAGGCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LWQGLCVIFWLSLLHSGQCLSPP*RPRLCP
Trigger: AGGACAGAGCCTCGGTCTGCATGGGGGTGACAGGCA...CTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTGTCTGGGTCTGGGTCTaGGTCCAGGTCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VLWLRVVSLAGSLRDFLAVWVWV*VQVQVH
Trigger: GTGGACCTGGACCTGGACCCAGACCCAGACCCAGAC...AGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGAGCACAGGGCGTTGGTaGGGATGGCCTCCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LHGFFKVRLLVRVGFRVQSTGRW*GWPPGA
Trigger: CGCTCCGGGAGGCCATCCCCACCAACGCCCTGTGCT...CTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGTGGGCATCAGGGATCTaGAGCTGCTCCTCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: WRGQPHVGVDGLYLAYQLWASGI*SCSSEH
Trigger: GTGCTCCGAGGAGCAGCTCCAGATCCCTGATGCCCA...CAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GGGTCCAGGTCCAGGTCCACTTGGAGTTGGGGCTTCTGCTCTAGCATGTCTGCCAGGGGACGTGGCTGGTaGCTGGAGAAGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: GSRSRSTWSWGFCSSMSARGRGW*LEKLDL
Trigger: CAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCT...GGCAGACATGCTAGAGCAGAAGCCCCAACTCCAAGTGGACCTGGACCTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 72 bp CACGGTCTGAAGGTCTGTGGCGTGGGCAGCCCCATGTaGGAGTGGACGGACTCTATCTTGCATACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HGLKVCGVGSPM*EWTDSILHTSC
Trigger: GCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGACCTTCAGACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 72 bp GACGTGGCTGGTGGCTGGAGAAGCTGGATTTGCCCTTaGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: DVAGGWRSWICP*MVALLIPGLLK
Trigger: CTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACCAGCCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCACTCTGCAACCTCCACTaGCCCTTTGCCGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SVAWAAPCWSGRTLSCIPLCNLH*PFAAAW
Trigger: CCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAG...TGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCATGCGCACTGATGGAGTaGTGGCAGGCAGACACGTGG +
Preference number: 4 (lower is better)
Translates to: SVAWAAPCWSGRTLSCIPCALME*WQADTW
Trigger: CCACGTGTCTGCCTGCCATCACTCCATCAGTGCGCA...TGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCTGGAGGTCTGCGCACTaGTGGAGTGATGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GAFIMCSKLGRSILLEEAWRSAH*WSDGRQ
Trigger: CTGCCTGCCATCACTCCATCAGTGCGCAGACCTCCA...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TTGAGGGCTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCGGCAGGGTCTCTGCGTaGTTTTCTGGCTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LRAGYSSDSSKAGTCPISGRVSA*FSGSRS
Trigger: GGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCC...GGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGAGGCAGACGTTGCAGTaGGCCGAGATGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: WRGQPHVGVDGLYLAYQLRQTLQ*AEMVPL
Trigger: CAATGGCACCATCTCGGCTCACTGCAACGTCTGCCT...CAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp GGTCTGAAGGTCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTGGAGTTGGGGCTTCTaGTCTAGCATGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLKVCGVGSPMLEWTDSIWSWGF*SSMSAS
Trigger: GGAGGCAGACATGCTAGAGCAGAAGCCCCAACTCCA...GATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGACCTTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTGAGGGCTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCCTCCAGTTCTGGGTCTaGGTCTGGGTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LRAGYSSDSSKAGTCPISLQFWV*VWVWVQ
Trigger: CTGGACCCAGACCCAGACCCAGACCCAGAACTGGAG...GGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp AAGAGCAGCACACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTGGGATGCGGCTCCAGAGCCTCCTaGGGTGGAGCTTTCATCATG +
Preference number: 4 (lower is better)
Translates to: KSSTRPKGRSGWLQTLGCGSRAS*GGAFIM
Trigger: CATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCC...GCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp CTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTCCTCCACAGTGGTCAGTGCTCTGGCTTCGCGTaGTTTCTCTGGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LWQGLCVIFWLSLLHSGQCSGFA*FLWQGL
Trigger: GAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCA...CTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCACTCCAAGATTTCAGTaGTGCTCTGGCTTCGCGTGG +
Preference number: 4 (lower is better)
Translates to: WPALPLLSCMLMARCRLCTPRFQ*CSGFAW
Trigger: CCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGT...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCAAAGGCAGGTCTGGCTaGCTCCAAACTCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: LPLLSCMLMARCRLCSEAKGRSG*LQTLGC
Trigger: GCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTT...GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp GTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTGTGCGCACTGATGGAGTaGTGGCAGGCAGACACGTGG +
Preference number: 4 (lower is better)
Translates to: VEGSRASWGGAFIMCSKLCALME*WQADTW
Trigger: CCACGTGTCTGCCTGCCATCACTCCATCAGTGCGCA...CAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GCAGCACACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTGGGATGCTACTTTTTCCTGGCGGCACTaGGTCTTCCTTGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AAHDPKAGLAGSKLWDATFSWRH*VFLASL
Trigger: CAGGGAAGCAAGGAAGACTCAGTGCCGCCAGGAAAA...AGTAGCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp GATTTGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAGTCAAAGTAGAGCGGGCTGGTGGATaGTGCCTCTCCGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DLPFDGGPLDPRLAEVKVERAGG*CLSASS
Trigger: ACTGGAGGCGGAGAGGCAGCATCCACCAGCCCGCTC...TACTTTGACTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCAGTTCTGGGTATGTTGATGGCCCGCTaGAGGCTGTGCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GIALTPVKPAPVRSPVLGMLMAR*RLCSEA
Trigger: GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACAT...ACCCAGAACTGGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCAGCTCAGGAGGGGGCTTGGTaGCTGGGAGCTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSSKSDSSFELASVSSSAQEGAW*LGACGW
Trigger: CCAACCACAAGCTCCCAGGCACCAAGCCCCCTCCTG...AGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GGGTCCAGGTCCAGGTCCACTTGGAGTTGGGGCTTCTGCTCTAGCATGTCTGCCTTCCAGTGGGACCACTaGAACTATGTCCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GSRSRSTWSWGFCSSMSAFQWDH*NYVPLQ
Trigger: TTGGAGGGGGACATAGTTGCAGTGGTCCCACTGGAA...GGCAGACATGCTAGAGCAGAAGCCCCAACTCCAAGTGGACCTGGACCTGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp CATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAACGGGGAGCGGGCTGGTaGATGCTGCCTCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: HVGVDGLYLAYQLHGFFKRGAGW*MLPLRL
Trigger: GAGGCGGAGAGGCAGCATCCACCAGCCCGCTCCCCG...TTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTGCTCCAGTTCTGGGTCTaGGTCTGGGTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VEGSRASWGGAFIMCSKLLQFWV*VWVWVQ
Trigger: CTGGACCCAGACCCAGACCCAGACCCAGAACTGGAG...CAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCTCCGATCTCCAGTTCTaGGTCTGGGTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GAFIMCSKLGRSILLEEASDLQF*VWVWVW
Trigger: CCAGACCCAGACCCAGACCCAGAACTGGAGATCGGA...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GGCTCTCGCTCCTCCACAGTGGTCAGGAGGGGCTCTGTGGAAGGCTCCAGAGCCTGCATACCAGCTGCATaGGTTCTTCAAAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: GSRSSTVVRRGSVEGSRACIPAA*VLQSQT
Trigger: AGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCA...GGCTCTGGAGCCTTCCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTGCAGCAGAGGGGACGTaGCTGGTGGCTGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: APCWSGRTLSCIPAAWVLAAEGT*LVAGEA
Trigger: AGCTTCTCCAGCCACCAGCCACGTCCCCTCTGCTGC...AAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCAGCTCTCTGCAACCTCCACTaGCCCTTTGCCGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: GSSKSDSSFELASVSSSALCNLH*PFAAAW
Trigger: CCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAG...AGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCGAAACTCCGGCAGTTTaGATTCAGACTCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: WELVVGGAEWASGIWSCSETPAV*IQTPRS
Trigger: AGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTC...GGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTTGGAGGTCTGCGCACTaGTGGAGTGATGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: APCWSGRTLSCIPAAWVLWRSAH*WSDGRQ
Trigger: CTGCCTGCCATCACTCCATCAGTGCGCAGACCTCCA...AAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCACAGCATGGAAATCCATaGGCACCTGTCACCCCCATG +
Preference number: 4 (lower is better)
Translates to: SVAWAAPCWSGRTLSCIPQHGNP*APVTPM
Trigger: CATGGGGGTGACAGGTGCCCATGGATTTCCATGCTG...TGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588866.5
CDS-3UTR CCA 90 bp CTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCGGTCTGAAGGTCTGTaGCGTGGGCAGCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LHGFFKVRLLVRVGFRVQRSEGL*RGQPHV
Trigger: AACATGGGGCTGCCCACGCCACAGACCTTCAGACCG...CTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTTGGCAGGCAGACACGTaGTTCTCCTCCGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: VLWLRVVSLAGSLRDFLAWQADT*FSSVKL
Trigger: GAGTTTCACGGAGGAGAACCACGTGTCTGCCTGCCA...AGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GAATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCAGCCCCATGTTGGAGTCATGTGTTCCAAACTaGGCAGGTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EFRLHGLKVCGVGSPMLESCVPN*AGPSCW
Trigger: CCAGCAGGATGGACCTGCCCAGTTTGGAACACATGA...CTCCAACATGGGGCTGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTTGCTCTGGCTTCGCGTaGTTTCTCTGGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFCSGFA*FLWQGL
Trigger: GAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCA...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCATTTCAGTGGTGCTCTaGCTTCGCGTGGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPLLSCMLMARCRLCSEAISVVL*LRVVSL
Trigger: CAGAGAAACCACGCGAAGCCAGAGCACCACTGAAAT...GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTGAGGGCTGGGTATAGCAGGGGACGTGGCTGGTaGCTGGAGAAGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: FELASVSSSASSLRAGYSRGRGW*LEKLDL
Trigger: CAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCT...GCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCCTCCGTGAAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGCAGCAGAGGGGACGTaGCTGGTGGCTGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSVKLRQFEFRLHGLKVCAAEGT*LVAGEA
Trigger: AGCTTCTCCAGCCACCAGCCACGTCCCCTCTGCTGC...ACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCACCCCCAGACTCCATGTaGCCTCTTGGTCTGATCTCT +
Preference number: 4 (lower is better)
Translates to: SVAWAAPCWSGRTLSCIPPPDSM*PLGLIS
Trigger: AGAGATCAGACCAAGAGGCCACATGGAGTCTGGGGG...TGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp GTAATGTCTTTGTTAGGTTTTGATAGGGAGGATGGCTTCGGCCCGGGAGGCAGATCAGACTCCACGGTCTaGAGGTCTGTGGCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VMSLLGFDREDGFGPGGRSDSTV*RSVAWA
Trigger: TGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGA...TCTGCCTCCCGGGCCGAAGCCATCCTCCCTATCAAAACCTAACAAAGACATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp GGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCAGTTCTGGGTGCTCTGAGGCCTGGATaGGCTTGTTTGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GIALTPVKPAPVRSPVLGALRPG*ACLPRR
Trigger: TCTTCTGGGCAAACAAGCTCATCCAGGCCTCAGAGC...ACCCAGAACTGGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TTATTGGTTCTGTCTAGTCATTTCTCTGGGATTGTGGGGGCTGACAGCTTAAAACCCGGAGCGGGGATCTaGTGGGCTGGCCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LLVLSSHFSGIVGADSLKPGAGI*WAGLRC
Trigger: GCAGCGCAGGCCAGCCCATCAGATCCCCGCTCCGGG...TTTTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGACTAGACAGAACCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TCCTCCGTGAAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGGCAGGGTCTCTGCGTaGTTTTCTGGCTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: SSVKLRQFEFRLHGLKVCGRVSA*FSGSRS
Trigger: GGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCC...ACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp CTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTCCTCCACAGTGGTCAGCCAAGATTTCAGTGGTaGTCTGGCTTCGCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LWQGLCVIFWLSLLHSGQPRFQW*SGFAWF
Trigger: AAACCACGCGAAGCCAGAGCACCACTGAAATCTTGG...CTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCTGGAGAAGCTGGATTTaGCCTTTGATGGTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GAFIMCSKLGRSILLEEAWRSWI*PLMVAL
Trigger: GAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCA...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp AAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCCCCTTTGCCGCAGCATaGAAATCCATGGGCACCTGT +
Preference number: 4 (lower is better)
Translates to: KLRQFEFRLHGLKVCGVGPFAAA*KSMGTC
Trigger: ACAGGTGCCCATGGATTTCCATGCTGCGGCAAAGGG...GCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588866.5
CDS-3UTR CCA 90 bp CTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCAGTTCTGAGGTCCAGGTCCACTTaGAGTTGGGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LGIALTPVKPAPVRSPVLRSRST*SWGFCS
Trigger: AGAGCAGAAGCCCCAACTCCAAGTGGACCTGGACCT...CAGAACTGGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTTCCGATCTCCAGTTCTaGGTCTGGGTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: APCWSGRTLSCIPAAWVLSDLQF*VWVWVW
Trigger: CCAGACCCAGACCCAGACCCAGAACTGGAGATCGGA...AAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCCTCCGTGAAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTCGGTCTGAAGGTCTGTaGCGTGGGCAGCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: SSVKLRQFEFRLHGLKVCRSEGL*RGQPHV
Trigger: AACATGGGGCTGCCCACGCCACAGACCTTCAGACCG...ACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTCAGAGCCTCCTGGGGTaGAGCTTTCATCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: WLRVVSLAGSLRDFLALAQSLLG*SFHHVF
Trigger: GAACACATGATGAAAGCTCCACCCCAGGAGGCTCTG...AGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GCTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGGCTCCAGAGCCTCCTaGGGTGGAGCTTTCATCATG +
Preference number: 4 (lower is better)
Translates to: AAWVLQSQTPRSSWLPCPGSRAS*GGAFIM
Trigger: CATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCC...TGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTGAGGGCTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCGGTGGCTGGAGAAGCTaGATTTGCCCTTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LRAGYSSDSSKAGTCPISGGWRS*ICPLMV
Trigger: CACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACC...GGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCACCCAAAGGCAGGTCTaGCTGGCTCCAAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: PHVGVDGLYLAYQLHGFFTQRQV*LAPNSG
Trigger: CCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGT...GAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp CTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGGCTCTGAGGCCTGGATaGGCTTGTTTGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LHGFFKVRLLVRVGFRVQALRPG*ACLPRR
Trigger: TCTTCTGGGCAAACAAGCTCATCCAGGCCTCAGAGC...CTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp ATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCATGTGGTTGGAGGAGCTaGGTGGGCATCAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: MGSSKSDSSFELASVSSSCGWRS*VGIRDL
Trigger: CAGATCCCTGATGCCCACTCAGCTCCTCCAACCACA...TGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TGGGAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTGGGATTGTGGGGGCTaGCAGCTTAAAATGGATTTT +
Preference number: 4 (lower is better)
Translates to: WELVVGGAEWASGIWSCSWDCGG*QLKMDF
Trigger: AAAATCCATTTTAAGCTGTCAGCCCCCACAATCCCA...GGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GAGCTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGATGTCTGCCTCCAGCTaGAATGTTTCAACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ELVVGGAEWASGIWSCSSMSASS*NVSTQS
Trigger: GCTTTGAGTTGAAACATTTCAGCTGGAGGCAGACAT...CGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588866.5
CDS-3UTR GCA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTGAGCGGGCTGGTGGATaGTGCCTCTCCGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLERAGG*CLSASS
Trigger: ACTGGAGGCGGAGAGGCAGCATCCACCAGCCCGCTC...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp TTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTGAGGGCTGGGTATAGCCCTCCACTGACCCTTTaGCGCAGCATGGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: FELASVSSSASSLRAGYSPPLTL*RSMEIH
Trigger: ATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGG...GCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp CCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCTGGAGTTGGGGCTTCTaGTCTAGCATGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PHVGVDGLYLAYQLHGFFWSWGF*SSMSAS
Trigger: GGAGGCAGACATGCTAGAGCAGAAGCCCCAACTCCA...GAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCCTGGATGAGCTTGTTTaGCCAGAAGAGGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GAFIMCSKLGRSILLEEALDELV*PEEVLG
Trigger: TCCAAGCACCTCTTCTGGGCAAACAAGCTCATCCAG...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp CTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTGCCATTGTTGAGCTaGATGTTGATGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LHGFFKVRLLVRVGFRVQLPLLS*MLMARC
Trigger: GCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG...CTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp CTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCCCTTTCTGCACCCAGTaGCTTTGCAAATGCTATTTC +
Preference number: 4 (lower is better)
Translates to: LPLLSCMLMARCRLCSEAPFCTQ*LCKCYF
Trigger: GAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGG...GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCAGTTCTGGGTAGGTCCACTTGGAGTTaGGGCTTCTGCTCTAGCATG +
Preference number: 4 (lower is better)
Translates to: GIALTPVKPAPVRSPVLGRSTWS*GFCSSM
Trigger: CATGCTAGAGCAGAAGCCCCAACTCCAAGTGGACCT...ACCCAGAACTGGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTGAGGGCTGGGTATAGCAGGTCCACTTGGAGTTaGGGCTTCTGCTCTAGCATG +
Preference number: 4 (lower is better)
Translates to: FELASVSSSASSLRAGYSRSTWS*GFCSSM
Trigger: CATGCTAGAGCAGAAGCCCCAACTCCAAGTGGACCT...GCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAATGGCAGGCAGACACGTaGTTCTCCTCCGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKWQADT*FSSVKL
Trigger: GAGTTTCACGGAGGAGAACCACGTGTCTGCCTGCCA...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAACTCGCTCCTCCACAGTaGTCAGGAGGGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HVGVDGLYLAYQLHGFFKLAPPQ*SGGALW
Trigger: CCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAG...TTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
3UTR CAA 72 bp TTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTaGAGGGCTGGGTATAGCTCTGACTCCAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: FELASVSSSASS*RAGYSSDSSKA
Trigger: GGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp CATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAATCAGACTCCACGGTCTaGAGGTCTGTGGCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: HVGVDGLYLAYQLHGFFKSDSTV*RSVAWA
Trigger: TGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGA...TTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp AAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCGAAACTCCGGCAGTTTaGATTCAGACTCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: KLRQFEFRLHGLKVCGVGETPAV*IQTPRS
Trigger: AGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTC...GCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCCGTGGTTCTCCTCCGTaGAACTCCGGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: CMGSSKSDSSFELASVSSRGSPP*NSGSLN
Trigger: ATTCAAACTGCCGGAGTTTCACGGAGGAGAACCACG...GCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCGGGAAGATGCAAAGGTaGTTAGCTCTGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GAFIMCSKLGRSILLEEAGKMQR*LALSGQ
Trigger: TTGACCTGACAGAGCTAATCACCTTTGCATCTTCCC...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTGGGAAGATGCAAAGGTaGTTAGCTCTGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VLWLRVVSLAGSLRDFLAGKMQR*LALSGQ
Trigger: TTGACCTGACAGAGCTAATCACCTTTGCATCTTCCC...AGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp CTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTCTGAGGCCAAGTTCTTGTCTTCCTaGCTCCAAGATTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LPLLSCMLMARCRLCSEAKFLSS*LQDFSG
Trigger: ACCACTGAAATCTTGGAGTCAGGAAGACAAGAACTT...GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp ATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCATTTTCCTGGCGGCACTaGGTCTTCCTTGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: MGSSKSDSSFELASVSSSFSWRH*VFLASL
Trigger: CAGGGAAGCAAGGAAGACTCAGTGCCGCCAGGAAAA...TGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGATGAGCTTGTTTaGCCAGAAGAGGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFLDELV*PEEVLG
Trigger: TCCAAGCACCTCTTCTGGGCAAACAAGCTCATCCAG...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAGATGTTGATGGCCCGCTaGAGGCTGTGCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MLEWTDSILHTSCMGSSKMLMAR*RLCSEA
Trigger: GGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACAT...CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GATTTGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAGTCAAAGTACTCTGGCAGGGTCTCTaGGTGATTTTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: DLPFDGGPLDPRLAEVKVLWQGL*VIFWLS
Trigger: CGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAG...TACTTTGACTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp AAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCCCAAGATTTCAGTGGTaGTCTGGCTTCGCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KLRQFEFRLHGLKVCGVGPRFQW*SGFAWF
Trigger: AAACCACGCGAAGCCAGAGCACCACTGAAATCTTGG...GCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAATGGAGAAGCTGGATTTaGCCTTTGATGGTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKWRSWI*PLMVAL
Trigger: GAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCA...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTACCGCAGGCCTTTCTaGACCCAGTGCCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: GSSKSDSSFELASVSSSAYRRPF*TQCLCK
Trigger: TTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTA...AGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GATTTGCCCTTTGATGGTGGCCCTCTTGATCCCCGGCTTGCTGAAGTCAAAGTAACTCCTCGTTCGAGTTaGCTTCCGTGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DLPFDGGPLDPRLAEVKVTPRSS*LPCPAQ
Trigger: CTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGT...TACTTTGACTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GCTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCACTCTGCGTGATTTTCTaGCTCTCGCTCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: AAWVLQSQTPRSSWLPCPLCVIF*LSLLHS
Trigger: ACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAG...TGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTCTGCGTGATTTTCTaGCTCTCGCTCCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKLCVIF*LSLLHS
Trigger: ACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAG...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCTGTGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCATGGAAAGCCTTCTTCTaGCAAAGTCCTACTCATGCC +
Preference number: 4 (lower is better)
Translates to: SVAWAAPCWSGRTLSCIPWKAFF*QSPTHA
Trigger: GGCATGAGTAGGACTTTGCCAGAAGAAGGCTTTCCA...TGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCTGTCCCCCTCCAACCTaGATTTTCAATGACCTCAGA +
Preference number: 4 (lower is better)
Translates to: GAFIMCSKLGRSILLEEACPPPT*IFNDLR
Trigger: TCTGAGGTCATTGAAAATCCAGGTTGGAGGGGGACA...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CAA 72 bp AAGTCATCTCGCATCTCTGCAACCTCCACTGACCCTTaGCCGCAGCATGGAAATCCATGGGCACCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KSSRISATSTDP*PQHGNPWAPFF
Trigger: GAAAAAGGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAGATGCGAGATGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
3UTR CAA 72 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTaGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: CMGSSKSDSSFE*ASVSSSASSLR
Trigger: CCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TCCTCCGTGAAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTCGTGGTTCTCCTCCGTaGAACTCCGGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: SSVKLRQFEFRLHGLKVCRGSPP*NSGSLN
Trigger: ATTCAAACTGCCGGAGTTTCACGGAGGAGAACCACG...ACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp ATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCACCTCCACTGACCCTTTaGCGCAGCATGGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: MGSSKSDSSFELASVSSSPPLTL*RSMEIH
Trigger: ATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGG...TGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GAATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCAGCCCCATGTTGGAGATCTTGCATACCAGCTaGATGGGTTCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: EFRLHGLKVCGVGSPMLEILHTS*MGSSKS
Trigger: TGACTTTGAAGAACCCATGCAGCTGGTATGCAAGAT...CTCCAACATGGGGCTGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGTCTTCCTTGCTTCCCTaGAGCAGAGGGGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLSSLLP*SRGDVA
Trigger: AGCCACGTCCCCTCTGCTGCAGGGAAGCAAGGAAGA...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp TCCTCCGTGAAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGCAAAGTCCTACTCATaGCTGTCACCCCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SSVKLRQFEFRLHGLKVCAKSYS*LSPPCR
Trigger: TCTGCATGGGGGTGACAGGCATGAGTAGGACTTTGC...ACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCCAGTGCCTTTGCAAATaGTATTTCTTATACCTGGAA +
Preference number: 4 (lower is better)
Translates to: WPALPLLSCMLMARCRLCQCLCK*YFLYLE
Trigger: TTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTG...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp CCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAGCCCCATGTTGGAGTaGACGGACTCTATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PHVGVDGLYLAYQLHGFFSPMLE*TDSILH
Trigger: ATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCT...GAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGGCTCTGTCAGGTCAATaGGTGGCGGGAGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLALSGQ*VAGDLR
Trigger: CCTCAGATCTCCCGCCACCCATTGACCTGACAGAGC...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAGGCTCTGTCAGGTCAATaGGTGGCGGGAGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: MLEWTDSILHTSCMGSSKALSGQ*VAGDLR
Trigger: CCTCAGATCTCCCGCCACCCATTGACCTGACAGAGC...CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TCCTCCGTGAAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTTCATGTGTTCCAAACTaGGCAGGTCCATCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSVKLRQFEFRLHGLKVCSCVPN*AGPSCW
Trigger: CCAGCAGGATGGACCTGCCCAGTTTGGAACACATGA...ACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGGCTCAGCTTCAAGCTTaGGGGCTGGGTATAGCTCTG +
Preference number: 4 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLAQLQA*GLGIAL
Trigger: CAGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGC...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TGCCCAGTTGGCCACGGCTCTCCTCTCACAGATGAGGAAACGTGTATGAGGTCATGGGATTGTGGGGGCTaGCAGCTTAAAATGGATTTT +
Preference number: 4 (lower is better)
Translates to: CPVGHGSPLTDEETCMRSWDCGG*QLKMDF
Trigger: AAAATCCATTTTAAGCTGTCAGCCCCCACAATCCCA...TGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGCCAACTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAAAACCTGGATTTTCAATaGCCTCAGAGTGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKNLDFQ*PQSEPA
Trigger: AGCAGGCTCACTCTGAGGTCATTGAAAATCCAGGTT...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGTCACATGCATATTCATaGGGGATATCGGTGTATAAT +
Preference number: 4 (lower is better)
Translates to: LVVGGAEWASGIWSCSSESHAYS*GISVYN
Trigger: ATTATACACCGATATCCCTCATGAATATGCATGTGA...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAGCTGCCATTGTTGAGCTaGATGTTGATGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: MLEWTDSILHTSCMGSSKLPLLS*MLMARC
Trigger: GCAGCGGGCCATCAACATGCAGCTCAACAATGGCAG...CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR GCA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTTCTTCCTTGCTTCCCTaGAGCAGAGGGGACGTGGCT +
Preference number: 4 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLSSLLP*SRGDVA
Trigger: AGCCACGTCCCCTCTGCTGCAGGGAAGCAAGGAAGA...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAGAGGTCCAGGTCCACTTaGAGTTGGGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MLEWTDSILHTSCMGSSKRSRST*SWGFCS
Trigger: AGAGCAGAAGCCCCAACTCCAAGTGGACCTGGACCT...CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTATTGGTTCTGTCTAGTCATTTCTCTGGGATTGTGGGGGCTGACAGCTTAAAAGTCTGGGTCTGGGTCTaGGTCCAGGTCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LLVLSSHFSGIVGADSLKVWVWV*VQVQVH
Trigger: GTGGACCTGGACCTGGACCCAGACCCAGACCCAGAC...TTTTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGACTAGACAGAACCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TGCCCAGTTGGCCACGGCTCTCCTCTCACAGATGAGGAAACGTGTATGAGGTCATGCATACCAGCTGCATaGGTTCTTCAAAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: CPVGHGSPLTDEETCMRSCIPAA*VLQSQT
Trigger: AGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCA...TGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGCCAACTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GTAATGTCTTTGTTAGGTTTTGATAGGGAGGATGGCTTCGGCCCGGGAGGCAGAAGCCCCATGTTGGAGTaGACGGACTCTATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VMSLLGFDREDGFGPGGRSPMLE*TDSILH
Trigger: ATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCT...TCTGCCTCCCGGGCCGAAGCCATCCTCCCTATCAAAACCTAACAAAGACATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp TTATTGGTTCTGTCTAGTCATTTCTCTGGGATTGTGGGGGCTGACAGCTTAAAACTCGCTCCTCCACAGTaGTCAGGAGGGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLVLSSHFSGIVGADSLKLAPPQ*SGGALW
Trigger: CCACAGAGCCCCTCCTGACCACTGTGGAGGAGCGAG...TTTTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGACTAGACAGAACCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTTCTTGTATCTGGTGTTaGCTTAAGTCATCTCGCATC +
Preference number: 4 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFSCIWC*LKSSRI
Trigger: GATGCGAGATGACTTAAGTCAACACCAGATACAAGA...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR TCA 90 bp AAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGGCGTGGGCAAGTTCTTGTCTTCCTaGCTCCAAGATTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KLRQFEFRLHGLKVCGVGKFLSS*LQDFSG
Trigger: ACCACTGAAATCTTGGAGTCAGGAAGACAAGAACTT...GCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGATTTCAGTaGTGCTCTGGCTTCGCGTGG +
Preference number: 4 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLTPRFQ*CSGFAW
Trigger: CCACGCGAAGCCAGAGCACCACTGAAATCTTGGAGT...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CCAAAGGCAGGTCTGGCTGGCTCCAAACTCTGGGATGCTACTCACTGCACTGTCGCTATTTCTTATACCTaGAAAGCCTTCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PKAGLAGSKLWDATHCTVAISYT*KAFFWQ
Trigger: TTGCCAGAAGAAGGCTTTCCAGGTATAAGAAATAGC...GACAGTGCAGTGAGTAGCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp TGCCCAGTTGGCCACGGCTCTCCTCTCACAGATGAGGAAACGTGTATGAGGTCACAGCATGGAAATCCATaGGCACCCTTTTTCTATGTT +
Preference number: 4 (lower is better)
Translates to: CPVGHGSPLTDEETCMRSQHGNP*APFFYV
Trigger: AACATAGAAAAAGGGTGCCCATGGATTTCCATGCTG...TGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGCCAACTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp GCTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCATCTTGTATCTGGTGTTaGCTTAAGTCATCTCGCATC +
Preference number: 4 (lower is better)
Translates to: AAWVLQSQTPRSSWLPCPSCIWC*LKSSRI
Trigger: GATGCGAGATGACTTAAGTCAACACCAGATACAAGA...TGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAATTTCAGTGGTGCTCTaGCTTCGCGTGGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HVGVDGLYLAYQLHGFFKISVVL*LRVVSL
Trigger: CAGAGAAACCACGCGAAGCCAGAGCACCACTGAAAT...TTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTGGTGGCTGGAGAAGCTaGATTTGCCCTTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLGGWRS*ICPLMV
Trigger: CACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACC...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp TGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGGCTGACAGCTTAAAATaGATTTTCACCAATAATGGA +
Preference number: 4 (lower is better)
Translates to: WRGQPHVGVDGLYLAYQLADSLK*IFTNNG
Trigger: TCCATTATTGGTGAAAATCCATTTTAAGCTGTCAGC...CAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp GTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTGCACTGGAGGCTTTATTaGTTCTGTCTAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: VEGSRASWGGAFIMCSKLHWRLY*FCLVIS
Trigger: AGAAATGACTAGACAGAACCAATAAAGCCTCCAGTG...CAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTATTGGTTCTGTCTAGTCATTTCTCTGGGATTGTGGGGGCTGACAGCTTAAAAACTCCTCGTTCGAGTTaGCTTCCGTGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLVLSSHFSGIVGADSLKTPRSS*LPCPAQ
Trigger: CTGAGCTGGACACGGAAGCCAACTCGAACGAGGAGT...TTTTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGACTAGACAGAACCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp TTGAGGGCTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCGCTGACAGCTTAAAATaGATTTTCACCAATAATGGA +
Preference number: 4 (lower is better)
Translates to: LRAGYSSDSSKAGTCPISADSLK*IFTNNG
Trigger: TCCATTATTGGTGAAAATCCATTTTAAGCTGTCAGC...GGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAGCTCCATGTGGCCTCTTaGTCTGATCTCTACCTTCAT +
Preference number: 4 (lower is better)
Translates to: MLEWTDSILHTSCMGSSKLHVAS*SDLYLH
Trigger: ATGAAGGTAGAGATCAGACCAAGAGGCCACATGGAG...CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp CTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGACCCTTTGCCGCAGCATaGAAATCCATGGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: LAEVKVRLSEVLVFLTPRPFAAA*KSMGTL
Trigger: AAGGGTGCCCATGGATTTCCATGCTGCGGCAAAGGG...TCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp ACCCTTTGCCGCAGCATGGAAATCCATGGGCACCCTTTTTCTATGTTGTTGAATTCAATGACCTCAGAGTaGGCCTGCTACATCTCACTT +
Preference number: 4 (lower is better)
Translates to: TLCRSMEIHGHPFSMLLNSMTSE*ACYISL
Trigger: AAGTGAGATGTAGCAGGCTCACTCTGAGGTCATTGA...ATTCAACAACATAGAAAAAGGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp CTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGACAGAGCCTCCTGGGGTaGAGCTTTCATCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: LAEVKVRLSEVLVFLTPRQSLLG*SFHHVF
Trigger: GAACACATGATGAAAGCTCCACCCCAGGAGGCTCTG...TCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGATTCGCGTGGTTTCTCTaGCAGGGTCTCTGCGTGATT +
Preference number: 4 (lower is better)
Translates to: LAEVKVRLSEVLVFLTPRFAWFL*QGLCVI
Trigger: AATCACGCAGAGACCCTGCCAGAGAAACCACGCGAA...TCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CCA 90 bp CCAACCTGGATTTTCAATGACCTCAGAGTGAGCCTGCTACATCTCACTTGTCTCTCATTTTTCATCTCTTaGCATCCAGCTTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PTWIFNDLRVSLLHLTCLSFFIS*HPASCP
Trigger: GGGACAGGAAGCTGGATGCCAAGAGATGAAAAATGA...GAGACAAGTGAGATGTAGCAGGCTCACTCTGAGGTCATTGAAAATCCAGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTTGTGGCCTCTTGGTCTaGTCTCTACCTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLCGLLV*SLPSFF
Trigger: GAAAAATGAAGGTAGAGATCAGACCAAGAGGCCACA...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR TCA 90 bp TTATTGGTTCTGTCTAGTCATTTCTCTGGGATTGTGGGGGCTGACAGCTTAAAACTCTCCTCTCACAGATaGGGAAACGTGTATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLVLSSHFSGIVGADSLKLSSHR*GNVYEV
Trigger: GACCTCATACACGTTTCCTCATCTGTGAGAGGAGAG...TTTTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGACTAGACAGAACCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTATCTTGCATACCAGCTaGATGGGTTCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLILHTS*MGSSKS
Trigger: TGACTTTGAAGAACCCATGCAGCTGGTATGCAAGAT...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTTGGGATGCTACTCACTaGACTGTCTTAAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLWDATH*TVLNLF
Trigger: AAAGAGATTTAAGACAGTGCAGTGAGTAGCATCCCA...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CCA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTCACTGGAGGCTTTATTaGTTCTGTCTAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLHWRLY*FCLVIS
Trigger: AGAAATGACTAGACAGAACCAATAAAGCCTCCAGTG...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR GCA 90 bp CTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGATGCACCCAGTGCCTTTaGAAATGCTATTTCTTATAC +
Preference number: 4 (lower is better)
Translates to: LAEVKVRLSEVLVFLTPRCTQCL*KCYFLY
Trigger: GTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCA...TCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS CCA 90 bp AATCCATGGGCACCTGTCACCCCCATGCAGACCGAGGCTCTGTCCTaGAGGCGGGGAGCGGGCTGGTGGATGCTGCCTCTCCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: NPWAPVTPMQTEALS*RRGAGWWMLPLRLQ
Trigger: CTGGAGGCGGAGAGGCAGCATCCACCAGCCCGCTCCCCGCCTCCAGGACAGAGCCTCGGTCTGCATGGGGGTGACAGGTGCCCATGGATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331780.5
ENST00000588866.5
CDS CCA 90 bp GTCCTACTCATGCCTGTCACCCCCATGCAGACCGAGGCTCTGTCCTaGAGGCGGGGAGCGGGCTGGTGGATGCTGCCTCTCCGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VLLMPVTPMQTEALS*RRGAGWWMLPLRLQ
Trigger: CTGGAGGCGGAGAGGCAGCATCCACCAGCCCGCTCCCCGCCTCCAGGACAGAGCCTCGGTCTGCATGGGGGTGACAGGCATGAGTAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCGTGGGCAGCCCCATGTaGGAGTGGACGGACTCTATC +
Preference number: 5 (lower is better)
Translates to: WPALPLLSCMLMARCRLCVGSPM*EWTDSI
Trigger: GATAGAGTCCGTCCACTCCAACATGGGGCTGCCCAC...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGGTGGGCAGCCCCATGTaGGAGTGGACGGACTCTATC +
Preference number: 5 (lower is better)
Translates to: LVVGGAEWASGIWSCSSEVGSPM*EWTDSI
Trigger: GATAGAGTCCGTCCACTCCAACATGGGGCTGCCCAC...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGGCCTGCGCTGCCATTGTTGAGCTGCATGTTGATGGCCCGCTGCAGGCTGTGCTTGGTGCCTGGGAGCTaGTGGTTGGAGGAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: WPALPLLSCMLMARCRLCLVPGS*WLEELS
Trigger: ACTCAGCTCCTCCAACCACAAGCTCCCAGGCACCAA...GCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGCCTGCGCTGCCATTGTaGAGCTGCATGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: LVVGGAEWASGIWSCSSEPALPL*SCMLMA
Trigger: GGCCATCAACATGCAGCTCAACAATGGCAGCGCAGG...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp ATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTCATCGGAGCACAGGGCGTaGGTGGGGATGGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: MGSSKSDSSFELASVSSSSEHRA*VGMASR
Trigger: CCGGGAGGCCATCCCCACCAACGCCCTGTGCTCCGA...TGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGACCTCCACTGACCCTTaGCCGCAGCATGGAAATCCA +
Preference number: 5 (lower is better)
Translates to: LVVGGAEWASGIWSCSSETSTDP*PQHGNP
Trigger: TGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGT...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGGAGGCCTGGATGAGCTaGTTTGCCCAGAAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: WRGQPHVGVDGLYLAYQLEAWMS*FAQKRC
Trigger: GCACCTCTTCTGGGCAAACAAGCTCATCCAGGCCTC...CAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp AAGAGCAGCACACGACCCAAAGGCAGGTCTGGCTGGCTCCAAACTCTGGGATGCTTGATGGTGGCCCTCTaGATCCCCGGCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KSSTRPKGRSGWLQTLGCLMVAL*IPGLLK
Trigger: CTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAA...GCATCCCAGAGTTTGGAGCCAGCCAGACCTGCCTTTGGGTCGTGTGCTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTGCCGAGATGGTGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFAEMVP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCACCATCTCGGC...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp TGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGTGGCCTGCGCTGCCATaGTTGAGCTGCATGTTGATG +
Preference number: 5 (lower is better)
Translates to: WRGQPHVGVDGLYLAYQLWPALP*LSCMLM
Trigger: CATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA...CAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAGTCGGAGCACAGGGCGTaGGTGGGGATGGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: MLEWTDSILHTSCMGSSKSEHRA*VGMASR
Trigger: CCGGGAGGCCATCCCCACCAACGCCCTGTGCTCCGA...CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTTTGATGGTGGCCCTCTaGATCCCCGGCTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: WLRVVSLAGSLRDFLALALMVAL*IPGLLK
Trigger: CTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAA...AGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGGCGTGGGCAGCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCTGGAGAAGCTGGATTaGCCCTTTGATGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: WRGQPHVGVDGLYLAYQLLEKLD*PFDGGP
Trigger: AGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAG...CAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGCTGCCCACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp CTGGGTATAGCTCTGACTCCAGTAAAGCCGGCACCTGTCCGATCTCCAGTTCTGGACTCCTCGTTCGAGTaGGCTTCCGTGTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LGIALTPVKPAPVRSPVLDSSFE*ASVSSS
Trigger: TGAGCTGGACACGGAAGCCAACTCGAACGAGGAGTC...CAGAACTGGAGATCGGACAGGTGCCGGCTTTACTGGAGTCAGAGCTATACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCGCCCAGAAGAGGTGCTaGGAGGTCTGCGCACTGATG +
Preference number: 5 (lower is better)
Translates to: CMGSSKSDSSFELASVSSAQKRC*EVCALM
Trigger: CATCAGTGCGCAGACCTCCAAGCACCTCTTCTGGGC...GCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGCCCAGTTGGCCACGGCTCTCCTCTCACAGATGAGGAAACGTGTATGAGGTCAGAGGCCTGGATGAGCTaGTTTGCCCAGAAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: CPVGHGSPLTDEETCMRSEAWMS*FAQKRC
Trigger: GCACCTCTTCTGGGCAAACAAGCTCATCCAGGCCTC...TGACCTCATACACGTTTCCTCATCTGTGAGAGGAGAGCCGTGGCCAACTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTTTGTTGAGCTGCATGTaGATGGCCCGCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFLLSCM*MARCRL
Trigger: CAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAA...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp GGAGCTTTCATCATGTGTTCCAAACTGGGCAGGTCCATCCTGCTGGAGGAGGCCCTGGAGAAGCTGGATTaGCCCTTTGATGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: GAFIMCSKLGRSILLEEALEKLD*PFDGGP
Trigger: AGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAG...GGCCTCCTCCAGCAGGATGGACCTGCCCAGTTTGGAACACATGATGAAAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCTGGCTCTCGCTTGGACGGACTCTATCTaGCATACCAGCTGCATGGGT +
Preference number: 5 (lower is better)
Translates to: WLRVVSLAGSLRDFLALAWTDSI*HTSCMG
Trigger: ACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCA...AGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TCTGTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAATTGTTGAGCTGCATGTaGATGGCCCGCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SVEGSRASWGGAFIMCSKLLSCM*MARCRL
Trigger: CAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAA...TTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TCAGTGGTGCTCTGGCTTCGCGTGGTTTCTCTGGCAGGGTCTCTGCGTGATTTTCCTGCTACATCTCACTaGTCTCCGGTTACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: SVVLWLRVVSLAGSLRDFPATSH*SPVTPR
Trigger: TCTGGGGGTAACCGGAGACAAGTGAGATGTAGCAGG...AAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCAGAGCACCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS GCA 90 bp GTTGACTTAAGTCATCTCGCATCTCTGCAACCTCCACTGACCCTTTaGCGCAGCATGGAAATCCATGGGCACCTGTCACCCCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: VDLSHLASLQPPLTL*RSMEIHGHLSPPCR
Trigger: TCTGCATGGGGGTGACAGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAGATGCGAGATGACTTAAGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331780.5
ENST00000588866.5
CDS-3UTR CAA 90 bp GCTGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAACCTCCACTGACCCTTaGCCGCAGCATGGAAATCCA +
Preference number: 5 (lower is better)
Translates to: AAWVLQSQTPRSSWLPCPTSTDP*PQHGNP
Trigger: TGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGT...TGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp GTAATGTCTTTGTTAGGTTTTGATAGGGAGGATGGCTTCGGCCCGGGAGGCAGATTGGTGCCTGGGAGCTaGTGGTTGGAGGAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: VMSLLGFDREDGFGPGGRLVPGS*WLEELS
Trigger: ACTCAGCTCCTCCAACCACAAGCTCCCAGGCACCAA...TCTGCCTCCCGGGCCGAAGCCATCCTCCCTATCAAAACCTAACAAAGACATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGGCACTGGAGGCTTTATaGGTTCTGTCTAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: LVVGGAEWASGIWSCSSEALEAL*VLSSHF
Trigger: GAAATGACTAGACAGAACCAATAAAGCCTCCAGTGC...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS GCA 90 bp CCTCACCCTAAGCCGAAGCTACCCCCAGAGTACCGCAGGCCTTTCTaGACCCAGTGCCTTTGCAAATGCTATTTCTTATACCTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: PHPKPKLPPEYRRPF*TQCLCKCYFLYLES
Trigger: GCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTACTCTGGGGGTAGCTTCGGCTTAGGGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp GCCCCATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTAGCTCAGCTTCAAGCTaGAGGGCTGGGTATAGCTCT +
Preference number: 5 (lower is better)
Translates to: APCWSGRTLSCIPAAWVLSSASS*RAGYSS
Trigger: AGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCT...AAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCTGGACGGACTCTATCTaGCATACCAGCTGCATGGGT +
Preference number: 5 (lower is better)
Translates to: CMGSSKSDSSFELASVSSWTDSI*HTSCMG
Trigger: ACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCA...GCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TGCATGGGTTCTTCAAAGTCAGACTCCTCGTTCGAGTTGGCTTCCGTGTCCAGCAGCTGGATTTGCCCTTaGATGGTGGCCCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: CMGSSKSDSSFELASVSSSWICP*MVALLI
Trigger: GATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCT...GCTGGACACGGAAGCCAACTCGAACGAGGAGTCTGACTTTGAAGAACCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp CTTGTGGTTGGAGGAGCTGAGTGGGCATCAGGGATCTGGAGCTGCTCCTCGGAGCTGCACCCAGTGCCTTaGCAAATGCTATTTCTTATA +
Preference number: 5 (lower is better)
Translates to: LVVGGAEWASGIWSCSSELHPVP*QMLFLI
Trigger: TATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAG...CTCCGAGGAGCAGCTCCAGATCCCTGATGCCCACTCAGCTCCTCCAACCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS GCA 90 bp CCCCCAGAGTACCGCAGGCCTTTCTGCACCCAGTGCCTTTGCAAATaGTATTTCTTATACCTGGAAAGCCTTCTTCTGGCAAAGTCCTAC +
Preference number: 5 (lower is better)
Translates to: PPEYRRPFCTQCLCK*YFLYLESLLLAKSY
Trigger: GTAGGACTTTGCCAGAAGAAGGCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTACTCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS GCA 90 bp AAGCCGAAGCTACCCCCAGAGTACCGCAGGCCTTTCTGCACCCAGTaGCTTTGCAAATGCTATTTCTTATACCTGGAAAGCCTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: KPKLPPEYRRPFCTQ*LCKCYFLYLESLLL
Trigger: CAGAAGAAGGCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTACTCTGGGGGTAGCTTCGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp ATGTTGGAGTGGACGGACTCTATCTTGCATACCAGCTGCATGGGTTCTTCAAAGTGGCCTGCGCTGCCATaGTTGAGCTGCATGTTGATG +
Preference number: 5 (lower is better)
Translates to: MLEWTDSILHTSCMGSSKWPALP*LSCMLM
Trigger: CATCAACATGCAGCTCAACAATGGCAGCGCAGGCCA...CTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TTCGAGTTGGCTTCCGTGTCCAGCTCAGCTTCAAGCTTGAGGGCTGGGTATAGCTTCATTTTTCATCTCTaGGCATCCAGCTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: FELASVSSSASSLRAGYSFIFHL*ASSFLS
Trigger: GGACAGGAAGCTGGATGCCAAGAGATGAAAAATGAA...GCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS GCA 90 bp AAGCTACCCCCAGAGTACCGCAGGCCTTTCTGCACCCAGTGCCTTTaGAAATGCTATTTCTTATACCTGGAAAGCCTTCTTCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: KLPPEYRRPFCTQCL*KCYFLYLESLLLAK
Trigger: CTTTGCCAGAAGAAGGCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTACTCTGGGGGTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS CCA 90 bp AGTGCCTTTGCAAATGCTATTTCTTATACCTGGAAAGCCTTCTTCTaGCAAAGTCCTACTCATGCCTGTCACCCCCATGCAGACCGAGGC +
Preference number: 5 (lower is better)
Translates to: SAFANAISYTWKAFF*QSPTHACHPHADRG
Trigger: GCCTCGGTCTGCATGGGGGTGACAGGCATGAGTAGGACTTTGCCAGAAGAAGGCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS CCA 90 bp GGCCTTTCTGCACCCAGTGCCTTTGCAAATGCTATTTCTTATACCTaGAAAGCCTTCTTCTGGCAAAGTCCTACTCATGCCTGTCACCCC +
Preference number: 5 (lower is better)
Translates to: GLSAPSAFANAISYT*KAFFWQSPTHACHP
Trigger: GGGGTGACAGGCATGAGTAGGACTTTGCCAGAAGAAGGCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp GATCCCCGGCTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGAGCTGGATTTGCCCTTaGATGGTGGCCCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: DPRLAEVKVRLSEVLVFLSWICP*MVALLI
Trigger: GATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCT...CAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCCGGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp GTGGCCTCTTGGTCTGATCTCTACCTTCATTTTTCATCTCTTGGCATCCAGCTTAGCTCAGCTTCAAGCTaGAGGGCTGGGTATAGCTCT +
Preference number: 5 (lower is better)
Translates to: VASWSDLYLHFSSLGIQLSSASS*RAGYSS
Trigger: AGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCT...AAGCTGGATGCCAAGAGATGAAAAATGAAGGTAGAGATCAGACCAAGAGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS-3UTR CAA 90 bp CTTGCTGAAGTCAAAGTAAGATTGAGCGAAGTTCTTGTCTTCCTGACTCCAAGACCTGCGCTGCCATTGTaGAGCTGCATGTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: LAEVKVRLSEVLVFLTPRPALPL*SCMLMA
Trigger: GGCCATCAACATGCAGCTCAACAATGGCAGCGCAGG...TCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp GTGGAAGGCTCCAGAGCCTCCTGGGGTGGAGCTTTCATCATGTGTTCCAAACTGGAAGTCAAAGTAAGATaGAGCGAAGTTCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: VEGSRASWGGAFIMCSKLEVKVR*SEVLVF
Trigger: GAAGACAAGAACTTCGCTCAATCTTACTTTGACTTC...CAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TCCTCCGTGAAACTCCGGCAGTTTGAATTCAGACTCCACGGTCTGAAGGTCTGTGAAGTCAAAGTAAGATaGAGCGAAGTTCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: SSVKLRQFEFRLHGLKVCEVKVR*SEVLVF
Trigger: GAAGACAAGAACTTCGCTCAATCTTACTTTGACTTC...ACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS-3UTR CAA 90 bp TTATTGGTTCTGTCTAGTCATTTCTCTGGGATTGTGGGGGCTGACAGCTTAAAAGCACTGGAGGCTTTATaGGTTCTGTCTAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: LLVLSSHFSGIVGADSLKALEAL*VLSSHF
Trigger: GAAATGACTAGACAGAACCAATAAAGCCTCCAGTGC...TTTTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGACTAGACAGAACCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586359.1
ENST00000588866.5
CDS CCA 72 bp GCACCTGTCACCCCCATGCAGACCGAGGCTCTGTCCTaGAGGCGGGGAGCGGGCTGGTGGATGCTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: APVTPMQTEALS*RRGAGWWMLPL
Trigger: GAGAGGCAGCATCCACCAGCCCGCTCCCCGCCTCCAGGACAGAGCCTCGGTCTGCATGGGGGTGACAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331780.5
ENST00000588866.5
CDS CCA 72 bp ATGCCTGTCACCCCCATGCAGACCGAGGCTCTGTCCTaGAGGCGGGGAGCGGGCTGGTGGATGCTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: MPVTPMQTEALS*RRGAGWWMLPL
Trigger: GAGAGGCAGCATCCACCAGCCCGCTCCCCGCCTCCAGGACAGAGCCTCGGTCTGCATGGGGGTGACAGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS GCA 72 bp AGTCATCTCGCATCTCTGCAACCTCCACTGACCCTTTaGCGCAGCATGGAAATCCATGGGCACCTGTCACCC +
Preference number: 6 (lower is better)
Translates to: SHLASLQPPLTL*RSMEIHGHLSP
Trigger: GGGTGACAGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAGATGCGAGATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331780.5
ENST00000588866.5
CDS CAA 72 bp AAGTCATCTCGCATCTCTGCAACCTCCACTGACCCTTaGCCGCAGCATGGAAATCCATGGGCACCTGTCACC +
Preference number: 6 (lower is better)
Translates to: KSSRISATSTDP*PQHGNPWAPVT
Trigger: GGTGACAGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAGATGCGAGATGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331780.5
ENST00000588866.5
CDS GCA 72 bp AAGCCGAAGCTACCCCCAGAGTACCGCAGGCCTTTCTaGACCCAGTGCCTTTGCAAATGCTATTTCTTATAC +
Preference number: 6 (lower is better)
Translates to: KPKLPPEYRRPF*TQCLCKCYFLY
Trigger: GTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTACTCTGGGGGTAGCTTCGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS CAA 90 bp GAAGCTACCCCCAGAGTACCGCAGGCCTTTCTGCACCCAGTGCCTTaGCAAATGCTATTTCTTATACCTGGAAAGCCTTCTTCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: EATPRVPQAFLHPVP*QMLFLIPGKPSSGK
Trigger: TTTGCCAGAAGAAGGCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTACTCTGGGGGTAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS GCA 72 bp CCAGAGTACCGCAGGCCTTTCTGCACCCAGTGCCTTTaGAAATGCTATTTCTTATACCTGGAAAGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: PEYRRPFCTQCL*KCYFLYLESLL
Trigger: AAGAAGGCTTTCCAGGTATAAGAAATAGCATTTGCAAAGGCACTGGGTGCAGAAAGGCCTGCGGTACTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586359.1
CDS TCA 72 bp TCAACTCAAAGCTCCTGTTCCTCTTGTATCTGGTGTTaGCTTAAGTCATCTCGCATCTCTGCAACCTCCACT +
Preference number: 6 (lower is better)
Translates to: STQSSCSSCIWC*LKSSRISATST
Trigger: AGTGGAGGTTGCAGAGATGCGAGATGACTTAAGTCAACACCAGATACAAGAGGAACAGGAGCTTTGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588866.5