Pregenerated sensors for SPATA24 (Homo sapiens)
Ensembl gene IDs: ENSG00000170469Ensembl transcript IDs: ENST00000302091.9, ENST00000450845.7, ENST00000451821.6, ENST00000507779.2, ENST00000509959.5, ENST00000512761.5, ENST00000514983.5
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGTGGCCCACCCGGGCCTaGCTGTATCCTCAGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GKMGASPFLYGGEEYSTPWPTRA*LYPQLG Trigger: CCCCAGCTGAGGATACAGGCAGGCCCGGGTGGGCCA...CGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | GAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGAGAGACACACAGATCCTaGCCCCGCCTTCGACCACCC | + |
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Preference number: 4 (lower is better) Translates to: EKWEQAHSFMAVKNIVHRETHRS*PRLRPP Trigger: GGGTGGTCGAAGGCGGGGTCAGGATCTGTGTGTCTC...TCGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR GCA 90 bp | ATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATATGGCCCACCCGGGCCTaGCTGTATCCTCAGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: MFQEKWEQAHSFMAVKNIWPTRA*LYPQLG Trigger: CCCCAGCTGAGGATACAGGCAGGCCCGGGTGGGCCA...TATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTGCCTTTTCGAAGGTGTaGCCCACCCGGGCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VSGKMGASPFLYGGEEYSAFSKV*PTRACL Trigger: CAGGCAGGCCCGGGTGGGCCACACCTTCGAAAAGGC...ACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | TGTATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATGCCTTTTCGAAGGTGTaGCCCACCCGGGCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CMFQEKWEQAHSFMAVKNAFSKV*PTRACL Trigger: CAGGCAGGCCCGGGTGGGCCACACCTTCGAAAAGGC...ATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACATACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | TCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACAGAGACACACAGATCCTaGCCCCGCCTTCGACCACCC | + |
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Preference number: 4 (lower is better) Translates to: SGKMGASPFLYGGEEYSTETHRS*PRLRPP Trigger: GGGTGGTCGAAGGCGGGGTCAGGATCTGTGTGTCTC...TGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | GGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGCTTCCCTCATTTCCGTaGCCTGCCTGGTCCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKMGASPFLYGGEEYSTPLPSFP*PAWSLK Trigger: CTTAAGGGACCAGGCAGGCCACGGAAATGAGGGAAG...CGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACGTGAAACCCTGCCTTTaGCACAGGCACTGGGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHVKPCL*HRHWVV Trigger: AACCACCCAGTGCCTGTGTCAAAGGCAGGGTTTCAC...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACTTTCCGTGGCCTGCCTaGTCCCTTAAGGCCTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHFPWPA*SLKAFS Trigger: CGAAAAGGCCTTAAGGGACCAGGCAGGCCACGGAAA...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACTGGATTAGTTCCTCCTaGGACTCAATCACGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHWISSS*DSITSR Trigger: GCGGGACGTGATTGAGTCTCAGGAGGAACTAATCCA...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | GGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGGGACAGGTGTTAGAGTaGAACCCTGCCTTTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: GKMGASPFLYGGEEYSTPGQVLE*NPAFDT Trigger: TGTGTCAAAGGCAGGGTTTCACTCTAACACCTGTCC...CGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACGCTGGTCCTTCTTGCTaGACTCCTGAAGGACTTTGC | + |
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Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHAGPSC*TPEGLC Trigger: GCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGC...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | GAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGACACTTGGTGATGAGCTaGTCCTTCTTGCTGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: EKWEQAHSFMAVKNIVHRHLVMS*SFLLDS Trigger: GGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTG...TCGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | GAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGAGACACAGGCACTGGGTaGTTAGGAAAGAGCCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKWEQAHSFMAVKNIVHRDTGTG*LGKSPF Trigger: AAACGGGCTCTTTCCTAACCACCCAGTGCCTGTGTC...TCGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTTTTCCGTGGCCTGCCTaGTCCCTTAAGGCCTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSGKMGASPFLYGGEEYSFPWPA*SLKAFS Trigger: CGAAAAGGCCTTAAGGGACCAGGCAGGCCACGGAAA...ACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACATCACGTCCCGCAGTTaGTCTAAAGCGAGACACACA | + |
|
Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHITSRS*SKARHT Trigger: TGTGTGTCTCGCTTTAGATCAACTGCGGGACGTGAT...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | AAAAGGTGGACTAAGAAGGTTGTATGTTTCAGGAAAAATGGGAGCAAGCCCATTGTGAAACCCTGCCTTTaGCACAGGCACTGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRWTKKVVCFRKNGSKPIVKPCL*HRHWVV Trigger: AACCACCCAGTGCCTGTGTCAAAGGCAGGGTTTCAC...AATGGGCTTGCTCCCATTTTTCCTGAAACATACAACCTTCTTAGTCCACCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | ATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATATGGCCAGGAGGACCTTaGTTTTGGCATGGGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: MFQEKWEQAHSFMAVKNIWPGGP*FWHGQL Trigger: AAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCA...TATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | GAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGAACTTCTCCTCTTCCTTaGCCAGGAGGACCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKWEQAHSFMAVKNIVHRTSPLP*PGGPWF Trigger: AAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGT...TCGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCTTTCTCCAGCTGCTTaGATAGCACCTCTACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHLSPAA*IAPLPL Trigger: GAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAG...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | TCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACAGCTGGTCCTTCTTGCTaGACTCCTGAAGGACTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SGKMGASPFLYGGEEYSTAGPSC*TPEGLC Trigger: GCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGC...TGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | TCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACACTTGGTGATGAGCTaGTCCTTCTTGCTGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: SGKMGASPFLYGGEEYSTHLVMS*SFLLDS Trigger: GGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTG...TGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACTTCCCTCATTTCCGTaGCCTGCCTGGTCCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVLPSFP*PAWSLK Trigger: CTTAAGGGACCAGGCAGGCCACGGAAATGAGGGAAG...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACGAAGGACTTTGCTCTTaGCACTGGAGAGCGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHEGLCS*HWRALF Trigger: AAAAAGCGCTCTCCAGTGTCAAGAGCAAAGTCCTTC...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR GCA 90 bp | GAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGATTCTCTTTCTCCAGCTaGTTGGATAGCACCTCTACC | + |
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Preference number: 4 (lower is better) Translates to: EKWEQAHSFMAVKNIVHRFSFSS*LDSTST Trigger: GGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAA...TCGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTGGAGGACCTTGGTTTTaGCATGGGCAGCTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VSGKMGASPFLYGGEEYSGGPWF*HGQLSL Trigger: AAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCC...ACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | TCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACAGGAGGACCTTGGTTTTaGCATGGGCAGCTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SGKMGASPFLYGGEEYSTGGPWF*HGQLSL Trigger: AAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCC...TGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | TGTATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATCTTTCTCCAGCTGCTTaGATAGCACCTCTACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CMFQEKWEQAHSFMAVKNLSPAA*IAPLPL Trigger: GAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAG...ATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | AAAAGGTGGACTAAGAAGGTTGTATGTTTCAGGAAAAATGGGAGCAAGCCCATTGACACAGGCACTGGGTaGTTAGGAAAGAGCCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: KRWTKKVVCFRKNGSKPIDTGTG*LGKSPF Trigger: AAACGGGCTCTTTCCTAACCACCCAGTGCCTGTGTC...AATGGGCTTGCTCCCATTTTTCCTGAAACATACAACCTTCTTAGTCCACCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTAATCACGTCCCGCAGTTaGTCTAAAGCGAGACACACA | + |
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Preference number: 4 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVITSRS*SKARHT Trigger: TGTGTGTCTCGCTTTAGATCAACTGCGGGACGTGAT...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | TGTATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: CMFQEKWEQAHSFMAVKNFLLDS*RTLLLT Trigger: TGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAA...ATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | ATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGGACAGGTGTTAGAGTaGAACCCTGCCTTTGACACA | + |
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Preference number: 4 (lower is better) Translates to: MFQEKWEQAHSFMAVKNIGQVLE*NPAFDT Trigger: TGTGTCAAAGGCAGGGTTTCACTCTAACACCTGTCC...TATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR GCA 90 bp | GAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGACAGCTTCTTCTCCACTaGCTGGAACTCTTCTTTACT | + |
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Preference number: 4 (lower is better) Translates to: EKWEQAHSFMAVKNIVHRQLLLH*LELFFT Trigger: AGTAAAGAAGAGTTCCAGGCAGTGGAGAAGAAGCTG...TCGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451821.6 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTAACTTCTCCTCTTCCTTaGCCAGGAGGACCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVTSPLP*PGGPWF Trigger: AAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGT...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTAGAAGGACTTTGCTCTTaGCACTGGAGAGCGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVEGLCS*HWRALF Trigger: AAAAAGCGCTCTCCAGTGTCAAGAGCAAAGTCCTTC...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR TCA 90 bp | ATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATATTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: MFQEKWEQAHSFMAVKNIFLLDS*RTLLLT Trigger: TGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAA...TATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR GCA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTATTCTCTTTCTCCAGCTaGTTGGATAGCACCTCTACC | + |
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Preference number: 4 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVFSFSS*LDSTST Trigger: GGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAA...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACACAAAATTTTCGTCCTaGAGAACCATCACGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHTKFSS*RTITFL Trigger: GAGGAACGTGATGGTTCTCCAGGACGAAAATTTTGT...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451821.6 |
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| CDS-3UTR TCA 90 bp | CAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACGGAACTCTTCTTTACTaGCAAAATTTTCGTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QEKWEQAHSFMAVKNIVHGTLLY*QNFRPG Trigger: TCCAGGACGAAAATTTTGTCAGTAAAGAAGAGTTCC...GTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451821.6 |
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| CDS-3UTR CCA 90 bp | GTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTTTCTTCTCCACTGCCTaGAACTCTTCTTTACTGACA | + |
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Preference number: 4 (lower is better) Translates to: VSGKMGASPFLYGGEEYSFFSTA*NSSLLT Trigger: TGTCAGTAAAGAAGAGTTCCAGGCAGTGGAGAAGAA...ACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451821.6 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTAATGTTTCAGGAAAAATaGGAGCAAGCCCATTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVMFQEK*EQAHSF Trigger: AAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACAT...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CCA 90 bp | AAAAGGTGGACTAAGAAGGTTGTATGTTTCAGGAAAAATGGGAGCAAGCCCATTATGTTTCAGGAAAAATaGGAGCAAGCCCATTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KRWTKKVVCFRKNGSKPIMFQEK*EQAHSF Trigger: AAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACAT...AATGGGCTTGCTCCCATTTTTCCTGAAACATACAACCTTCTTAGTCCACCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS GCA 90 bp | GCCTGGTCCCTTAAGGCCTTTTCGAAGGTGTGGCCCACCCGGGCCTaGCTGTATCCTCAGCTGGGGACAGGTGTTAGAGTGAAACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AWSLKAFSKVWPTRA*LYPQLGTGVRVKPC Trigger: GCAGGGTTTCACTCTAACACCTGTCCCCAGCTGAGGATACAGGCAGGCCCGGGTGGGCCACACCTTCGAAAAGGCCTTAAGGGACCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS CCA 90 bp | TCATTTCCGTGGCCTGCCTGGTCCCTTAAGGCCTTTTCGAAGGTGTaGCCCACCCGGGCCTGCCTGTATCCTCAGCTGGGGACAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SFPWPAWSLKAFSKV*PTRACLYPQLGTGV Trigger: AACACCTGTCCCCAGCTGAGGATACAGGCAGGCCCGGGTGGGCCACACCTTCGAAAAGGCCTTAAGGGACCAGGCAGGCCACGGAAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS TCA 90 bp | CGGCGGCCATTTTATTTTTCCCTGGGATGCTGGTGGCTGCGGGCCTaGCGTGTCCCTGAGGCTTTCTTATGCTTCTGGTCCAGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRPFYFSLGCWWLRA*RVPEAFLCFWSSTW Trigger: CCAGGTGCTGGACCAGAAGCATAAGAAAGCCTCAGGGACACGTCAGGCCCGCAGCCACCAGCATCCCAGGGAAAAATAAAATGGCCGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000512761.5 |
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| CDS TCA 90 bp | CCACCCGGGCCTGCCTGTATCCTCAGCTGGGGACAGGTGTTAGAGTaGAACCCTGCCTTTGACACAGGCACTGGGTGGTTAGGAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGPACILSWGQVLE*NPAFDTGTGWLGKS Trigger: GCTCTTTCCTAACCACCCAGTGCCTGTGTCAAAGGCAGGGTTTCACTCTAACACCTGTCCCCAGCTGAGGATACAGGCAGGCCCGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS CCA 90 bp | AAGAATATAGTACACCGACTGCTTCCCTCATTTCCGTGGCCTGCCTaGTCCCTTAAGGCCTTTTCGAAGGTGTGGCCCACCCGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNIVHRLLPSFPWPA*SLKAFSKVWPTRAC Trigger: GCAGGCCCGGGTGGGCCACACCTTCGAAAAGGCCTTAAGGGACCAGGCAGGCCACGGAAATGAGGGAAGCAGTCGGTGTACTATATTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS GCA 90 bp | AGCTCTCCTGCTGCTTCTGGATCCGGAAGTCAGACATGTGATTCCTaGAACGGAGCCGGCTGGTGGTGGGCTGAAGATCTGTTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSPAASGSGSQTCDS*NGAGWWWAEDLFLL Trigger: CAGCAGAAACAGATCTTCAGCCCACCACCAGCCGGCTCCGTTGCAGGAATCACATGTCTGACTTCCGGATCCAGAAGCAGCAGGAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302091.9 |
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| CDS CCA 90 bp | ATGGCGGTGAAGAATATAGTACACCGACTGCTTCCCTCATTTCCGTaGCCTGCCTGGTCCCTTAAGGCCTTTTCGAAGGTGTGGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: MAVKNIVHRLLPSFP*PAWSLKAFSKVWPT Trigger: GGTGGGCCACACCTTCGAAAAGGCCTTAAGGGACCAGGCAGGCCACGGAAATGAGGGAAGCAGTCGGTGTACTATATTCTTCACCGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS CCA 90 bp | GCACCTCTACCTCTCCGAGGGCAAACTGTAACTTCTCCTCTTCCTTaGCCAGGAGGACCTTGGTTTTGGCATGGGCAGCTTTCTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: APLPLRGQTVTSPLP*PGGPWFWHGQLSLP Trigger: TGGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGTTTGCCCTCGGAGAGGTAGAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 ENST00000512761.5 ENST00000514983.5 |
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| CDS CCA 90 bp | CGAGGGCAAACTGTAACTTCTCCTCTTCCTTGGCCAGGAGGACCTTaGTTTTGGCATGGGCAGCTTTCTCTTCCACGTTCCTCAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGQTVTSPLPWPGGP*FWHGQLSLPRSSAG Trigger: ACCAGCTGAGGAACGTGGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGTTTGCCCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | GGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGGCCTCCCGCCTACCATaGCACTTGGTGATGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKMGASPFLYGGEEYSTPASRLP*HLVMSW Trigger: CCAGCTCATCACCAAGTGCAATGGTAGGCGGGAGGC...CGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS TCA 90 bp | CTACCATTGCACTTGGTGATGAGCTGGTCCTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACACTGGAGAGCGCTTTTTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLHLVMSWSFLLDS*RTLLLTLESAFSKA Trigger: GGCCTTTGAAAAAGCGCTCTCCAGTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTGCAATGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS TCA 90 bp | CTGTATCCTCAGCTGGGGACAGGTGTTAGAGTGAAACCCTGCCTTTaGCACAGGCACTGGGTGGTTAGGAAAGAGCCCGTTTATATAACC | + |
|
Preference number: 5 (lower is better) Translates to: LYPQLGTGVRVKPCL*HRHWVVRKEPVYIT Trigger: GGTTATATAAACGGGCTCTTTCCTAACCACCCAGTGCCTGTGTCAAAGGCAGGGTTTCACTCTAACACCTGTCCCCAGCTGAGGATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS GCA 90 bp | ACACTGGAGAGCGCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTaGTTGGATAGCACCTCTACCTCTCCGAGGGCAAACTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLESAFSKASFSFSS*LDSTSTSPRANCNF Trigger: GAAGTTACAGTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGCGCTCTCCAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000509959.5 ENST00000514983.5 |
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| CDS CCA 90 bp | TGGAGAGCGCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTGCTTaGATAGCACCTCTACCTCTCCGAGGGCAAACTGTAACTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WRALFQRPASLSPAA*IAPLPLRGQTVTSP Trigger: AGGAGAAGTTACAGTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGCGCTCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000509959.5 ENST00000514983.5 |
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| CDS CCA 90 bp | CAGGGCTGTTTATATAGGAAGGGATTAAATACCCAAAGGAAGCGGTaGTGCCTACCAGACAACAAAGACCCAGCTCCTCCCCTAGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: QGCLYRKGLNTQRKR*CLPDNKDPAPPLGY Trigger: GTAGCCTAGGGGAGGAGCTGGGTCTTTGTTGTCTGGTAGGCACCACCGCTTCCTTTGGGTATTTAATCCCTTCCTATATAAACAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302091.9 |
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| CDS CCA 90 bp | CAAACTGTAACTTCTCCTCTTCCTTGGCCAGGAGGACCTTGGTTTTaGCATGGGCAGCTTTCTCTTCCACGTTCCTCAGCTGGTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: QTVTSPLPWPGGPWF*HGQLSLPRSSAGGL Trigger: TAATCCACCAGCTGAGGAACGTGGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | GGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACCGTTGGCCAGGAGGACCTaGGTTTTGGCATGGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKMGASPFLYGGEEYSTPLARRT*VLAWAA Trigger: AGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAA...CGGTGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS TCA 90 bp | ATCTCATTGCACTTGGTGATGAGCTGGTCCTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACACTGGAGAGCGCTTTTTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISLHLVMSWSFLLDS*RTLLLTLESAFSKA Trigger: GGCCTTTGAAAAAGCGCTCTCCAGTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTGCAATGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000302091.9 ENST00000450845.7 |
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| CDS TCA 90 bp | ATTCCATTGCACTTGGTGATGAGCTGGTCCTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACACTGGAGAGCGCTTTTTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPLHLVMSWSFLLDS*RTLLLTLESAFSKA Trigger: GGCCTTTGAAAAAGCGCTCTCCAGTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTGCAATGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514983.5 |
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| CDS GCA 90 bp | GGCTGTTTATATAGGAAGGGATTAAATACCCAAAGGAAGCGGTGGTaGCTACCAGACAACAAAGACCCAGCTCCTCCCCTAGGCTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCLYRKGLNTQRKRW*LPDNKDPAPPLGYK Trigger: CTTGTAGCCTAGGGGAGGAGCTGGGTCTTTGTTGTCTGGTAGGCACCACCGCTTCCTTTGGGTATTTAATCCCTTCCTATATAAACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302091.9 |
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| CDS TCA 90 bp | CTACCATTGCACTTGGTGATGAGCTGGTCCTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACAGCTTTTTCAAAGGCCAGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLHLVMSWSFLLDS*RTLLLTAFSKASFS Trigger: AGAGAAGCTGGCCTTTGAAAAAGCTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTGCAATGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507779.2 |
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| CDS GCA 90 bp | TTGCTCTTGACAGCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTaGTTGGATAGCACCTCTACCTCTCCGAGGGCAAACTGTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLTAFSKASFSFSS*LDSTSTSPRANCNF Trigger: GAAGTTACAGTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGCTGTCAAGAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507779.2 ENST00000512761.5 |
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| CDS TCA 90 bp | ATCTCATTGCACTTGGTGATGAGCTGGTCCTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACAGCTTTTTCAAAGGCCAGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLHLVMSWSFLLDS*RTLLLTAFSKASFS Trigger: AGAGAAGCTGGCCTTTGAAAAAGCTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTGCAATGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512761.5 |
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| CDS-3UTR CAA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTATTGGCCAGGAGGACCTaGGTTTTGGCATGGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVLARRT*VLAWAA Trigger: AGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAA...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | TCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACACGCCTACCATTGCACTaGGTGATGAGCTGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGKMGASPFLYGGEEYSTRLPLH*VMSWSF Trigger: GAAGGACCAGCTCATCACCAAGTGCAATGGTAGGCG...TGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | TCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACAAGGAGGACCTTGGTTTaGGCATGGGCAGCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGKMGASPFLYGGEEYSTRRTLV*AWAAFS Trigger: AGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCT...TGTACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | GTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTAGGAGGACCTTGGTTTaGGCATGGGCAGCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSGKMGASPFLYGGEEYSRRTLV*AWAAFS Trigger: AGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCT...ACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTACGCCTACCATTGCACTaGGTGATGAGCTGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVRLPLH*VMSWSF Trigger: GAAGGACCAGCTCATCACCAAGTGCAATGGTAGGCG...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | TTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATATAGTAAACTTCTCCTCTTCCTaGGCCAGGAGGACCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FQEKWEQAHSFMAVKNIVNFSSS*ARRTLV Trigger: AACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTT...TACTATATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000451821.6 ENST00000509959.5 |
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| CDS-3UTR CAA 90 bp | TGTATGTTTCAGGAAAAATGGGAGCAAGCCCATTCCTTTATGGCGGTGAAGAATGGTGGACTAAGAAGGTaGTATGTTTCAGGAAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: CMFQEKWEQAHSFMAVKNGGLRR*YVSGKM Trigger: CATTTTTCCTGAAACATACAACCTTCTTAGTCCACC...ATTCTTCACCGCCATAAAGGAATGGGCTTGCTCCCATTTTTCCTGAAACATACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS CCA 72 bp | TGGCCTGCCTGGTCCCTTAAGGCCTTTTCGAAGGTGTaGCCCACCCGGGCCTGCCTGTATCCTCAGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WPAWSLKAFSKV*PTRACLYPQLG Trigger: CCCCAGCTGAGGATACAGGCAGGCCCGGGTGGGCCACACCTTCGAAAAGGCCTTAAGGGACCAGGCAGGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS GCA 72 bp | CTTAAGGCCTTTTCGAAGGTGTGGCCCACCCGGGCCTaGCTGTATCCTCAGCTGGGGACAGGTGTTAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LKAFSKVWPTRA*LYPQLGTGVRV Trigger: CACTCTAACACCTGTCCCCAGCTGAGGATACAGGCAGGCCCGGGTGGGCCACACCTTCGAAAAGGCCTTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS GCA 72 bp | GCTGCTTCTGGATCCGGAAGTCAGACATGTGATTCCTaGAACGGAGCCGGCTGGTGGTGGGCTGAAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: AASGSGSQTCDS*NGAGWWWAEDL Trigger: CAGATCTTCAGCCCACCACCAGCCGGCTCCGTTGCAGGAATCACATGTCTGACTTCCGGATCCAGAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302091.9 |
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| CDS CAA 90 bp | CCGAGGGCAAACTGTAACTTCTCCTCTTCCTTGGCCAGGAGGACCTaGGTTTTGGCATGGGCAGCTTTCTCTTCCACGTTCCTCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRANCNFSSSLARRT*VLAWAAFSSTFLSW Trigger: CCAGCTGAGGAACGTGGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGTTTGCCCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS TCA 72 bp | CCTGCCTGTATCCTCAGCTGGGGACAGGTGTTAGAGTaGAACCCTGCCTTTGACACAGGCACTGGGTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PACILSWGQVLE*NPAFDTGTGWL Trigger: TAACCACCCAGTGCCTGTGTCAAAGGCAGGGTTTCACTCTAACACCTGTCCCCAGCTGAGGATACAGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 |
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| CDS CAA 90 bp | CCGAGGGCAAACTGTAACTTCTCCTCTTCCTTGGCCAGGAGGACCTaGGTTTTGGCATGGGCAGCTTTCTCTTCCACCAGCTTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRANCNFSSSLARRT*VLAWAAFSSTSFFS Trigger: GGAGAAGAAGCTGGTGGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGTTTGCCCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000507779.2 ENST00000512761.5 ENST00000514983.5 |
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| CDS CAA 90 bp | AGCACCTCTACCTCTCCGAGGGCAAACTGTAACTTCTCCTCTTCCTaGGCCAGGAGGACCTTGGTTTTGGCATGGGCAGCTTTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: STSTSPRANCNFSSS*ARRTLVLAWAAFSS Trigger: GGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGTTTGCCCTCGGAGAGGTAGAGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 ENST00000512761.5 ENST00000514983.5 |
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| CDS TCA 72 bp | TTTTATTTTTCCCTGGGATGCTGGTGGCTGCGGGCCTaGCGTGTCCCTGAGGCTTTCTTATGCTTCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FYFSLGCWWLRA*RVPEAFLCFWS Trigger: GGACCAGAAGCATAAGAAAGCCTCAGGGACACGTCAGGCCCGCAGCCACCAGCATCCCAGGGAAAAATAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000512761.5 |
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| CDS GCA 72 bp | AGCGCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTaGTTGGATAGCACCTCTACCTCTCCGAGGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SAFSKASFSFSS*LDSTSTSPRAN Trigger: GTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000509959.5 ENST00000514983.5 |
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| CDS CCA 72 bp | ACTGTAACTTCTCCTCTTCCTTGGCCAGGAGGACCTTaGTTTTGGCATGGGCAGCTTTCTCTTCCACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TVTSPLPWPGGP*FWHGQLSLPPA Trigger: AGCTGGTGGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000507779.2 ENST00000512761.5 ENST00000514983.5 |
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| CDS CCA 72 bp | ACTGTAACTTCTCCTCTTCCTTGGCCAGGAGGACCTTaGTTTTGGCATGGGCAGCTTTCTCTTCCACGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVTSPLPWPGGP*FWHGQLSLPRS Trigger: GGAACGTGGAAGAGAAAGCTGCCCATGCCAAAACCAAGGTCCTCCTGGCCAAGGAAGAGGAGAAGTTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509959.5 |
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| CDS CAA 90 bp | CTGGAGAGCGCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTGCTaGGATAGCACCTCTACCTCTCCGAGGGCAAACTGTAACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LESAFSKASFSFSSC*DSTSTSPRANCNFS Trigger: GGAGAAGTTACAGTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGCGCTCTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000509959.5 ENST00000514983.5 |
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| CDS TCA 72 bp | GGTCCTTCTTGCTGGACTCCTGAAGGACTTTGCTCTTaGCACTGGAGAGCGCTTTTTCAAAGGCCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPSCWTPEGLCS*HWRALFQRPAS Trigger: AGAAGCTGGCCTTTGAAAAAGCGCTCTCCAGTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000509959.5 ENST00000514983.5 |
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| CDS TCA 72 bp | CACTTGGTGATGAGCTGGTCCTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACACTGGAGAGCGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLVMSWSFLLDS*RTLLLTLESAF Trigger: AAAAGCGCTCTCCAGTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000509959.5 ENST00000514983.5 |
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| CDS GCA 72 bp | ACAGCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTaGTTGGATAGCACCTCTACCTCTCCGAGGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: TAFSKASFSFSS*LDSTSTSPRAN Trigger: GTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507779.2 ENST00000512761.5 |
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| CDS CAA 72 bp | GCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTGCTaGGATAGCACCTCTACCTCTCCGAGGGCAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: AFSKASFSFSSC*DSTSTSPRANC Trigger: ACAGTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000302091.9 ENST00000450845.7 ENST00000451821.6 ENST00000507779.2 ENST00000509959.5 ENST00000512761.5 ENST00000514983.5 |
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| CDS CAA 90 bp | CTCTTGACAGCTTTTTCAAAGGCCAGCTTCTCTTTCTCCAGCTGCTaGGATAGCACCTCTACCTCTCCGAGGGCAAACTGTAACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLTAFSKASFSFSSC*DSTSTSPRANCNFS Trigger: GGAGAAGTTACAGTTTGCCCTCGGAGAGGTAGAGGTGCTATCCAAGCAGCTGGAGAAAGAGAAGCTGGCCTTTGAAAAAGCTGTCAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507779.2 ENST00000512761.5 |
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| CDS TCA 72 bp | CACTTGGTGATGAGCTGGTCCTTCTTGCTGGACTCCTaGAGGACTTTGCTCTTGACAGCTTTTTCAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: HLVMSWSFLLDS*RTLLLTAFSKA Trigger: GGCCTTTGAAAAAGCTGTCAAGAGCAAAGTCCTTCAGGAGTCCAGCAAGAAGGACCAGCTCATCACCAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507779.2 ENST00000512761.5 |
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| CDS CCA 72 bp | TTATATAGGAAGGGATTAAATACCCAAAGGAAGCGGTaGTGCCTACCAGACAACAAAGACCCAGCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LYRKGLNTQRKR*CLPDNKDPAPP Trigger: GGGAGGAGCTGGGTCTTTGTTGTCTGGTAGGCACCACCGCTTCCTTTGGGTATTTAATCCCTTCCTATATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302091.9 |
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| CDS CAA 72 bp | GTGATTCCTGAAGATCTGTTTCTGCTGGCTGATAACTaGCTGCAACTCTTTAATCTCATTCTCTTTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: VIPEDLFLLADN*LQLFNLILFAI Trigger: AATGGCAAAGAGAATGAGATTAAAGAGTTGCAGCAAGTTATCAGCCAGCAGAAACAGATCTTCAGGAATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450845.7 ENST00000512761.5 |
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