Pregenerated sensors for SPATA22 (Homo sapiens)
Ensembl gene IDs: ENSG00000141255Ensembl transcript IDs: ENST00000268981.9, ENST00000355380.8, ENST00000397168.7, ENST00000541913.5, ENST00000571553.5, ENST00000571607.1, ENST00000572582.5, ENST00000572969.6, ENST00000573128.5, ENST00000574051.5, ENST00000574457.1, ENST00000574797.5, ENST00000575375.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTCCAAAGGCCTCTCCTaGCCCGCCCACGGAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GKCSFSGHSCQHIYELGLSKGLS*PAHGVG Trigger: CCCCACTCCGTGGGCGGGTCAGGAGAGGCCTTTGGA...GAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CCA 90 bp | CTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGTCTCGGAAGAACCACGGCCTCAAATaGCGGCCTGTTTTGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LVIVANTSMNSASNQSRKNHGLK*RPVLAP Trigger: AGGAGCCAAAACAGGCCGCCATTTGAGGCCGTGGTT...CTTCCGAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | GTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGGGCTCCAGTCCGAGTTaGGACGCTCTTCCAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLFLVIVANTSMNSASNQGSSPS*DALPKA Trigger: GGCCTTTGGAAGAGCGTCTCAACTCGGACTGGAGCC...CTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CCA 90 bp | GAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTGACCCGCCCACGGAGTaGGGGCAGTTTGGTATCAAC | + |
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Preference number: 4 (lower is better) Translates to: ENVLFLVIVANTSMNSASDPPTE*GQFGIN Trigger: GTTGATACCAAACTGCCCCCACTCCGTGGGCGGGTC...AGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CCA 90 bp | ATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCAATGGCGGCCTGTTTTaGCTCCTGACCGCGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IGKCSFSGHSCQHIYELGNGGLF*LLTAVG Trigger: TCCCACCGCGGTCAGGAGCCAAAACAGGCCGCCATT...GCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | ACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTGTTTTGGCTCCTaGCCGCGGTGGGAGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TLENVLFLVIVANTSMNSACFGS*PRWERR Trigger: TCTTCTCTCCCACCGCGGTCAGGAGCCAAAACAGGC...CGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR GCA 90 bp | GAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTCCTTCTAGGCCCTCCTaGCAACACGACACACAACTT | + |
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Preference number: 4 (lower is better) Translates to: ENVLFLVIVANTSMNSASPSRPS*QHDTQL Trigger: AAGTTGTGTGTCGTGTTGGCAGGAGGGCCTAGAAGG...AGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CCA 90 bp | GTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGGGAGTGGGGGCAGTTTaGTATCAACGCACAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLFLVIVANTSMNSASNQGVGAV*YQRTVF Trigger: AAAGACTGTGCGTTGATACCAAACTGCCCCCACTCC...CTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CCA 90 bp | GAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTTGGGGTTGGTGGCATTaGTGTGCAAAAAGTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ENVLFLVIVANTSMNSASWGWWH*CAKSVL Trigger: GAGCACACTTTTTGCACACCAATGCCACCAACCCCA...AGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CCA 90 bp | AATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATTACAGGAGCCAACTCTaGATTCACAGCTTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: NVLFLVIVANTSMNSASNYRSQL*IHSFPG Trigger: GCCTGGGAAGCTGTGAATCCAGAGTTGGCTCCTGTA...ATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CCA 90 bp | TTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGTCTCGGCAGGGTGTTGTCTTCTaGAATATCATCCAACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLVIVANTSMNSASNQSRQGVVF*NIIQHL Trigger: CAAATGTTGGATGATATTCCAGAAGACAACACCCTG...CCGAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | CTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGTCTTTAAAGACAGAATCTTaGCTTCTCAGAGGACGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LFLVIVANTSMNSASNQSLKTES*LLRGRE Trigger: TTCTCGTCCTCTGAGAAGTCAAGATTCTGTCTTTAA...AGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | GAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATTGTTTTTGTTGTTaGGCTCCCGAACTCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: ENVLFLVIVANTSMNSASNCFCC*APELTG Trigger: TCCAGTGAGTTCGGGAGCTCAACAACAAAAACAATT...AGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR GCA 90 bp | ACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGGTGTGCAAAAAGTGTaGTCAATCTGCACGCACACA | + |
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Preference number: 4 (lower is better) Translates to: TLENVLFLVIVANTSMNSGVQKV*SICTHT Trigger: TGTGTGCGTGCAGATTGAGCACACTTTTTGCACACC...CGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR GCA 90 bp | TTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCCTAGCCCTCTCATTGTaGAGCCAGATATTTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LENVLFLVIVANTSMNSALALSL*SQIFLM Trigger: CATCAAAAATATCTGGCTGCACAATGAGAGGGCTAG...GGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | CACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCCTGTTCCTCTTTTTCTaGTTGAACAACGGAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIGKCSFSGHSCQHIYELLFLFF*LNNGTG Trigger: GCCTGTTCCGTTGTTCAATCAGAAAAAGAGGAACAG...GAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | ACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGTCCTCTTTTTCTGATTaGACAACGGAACAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLENVLFLVIVANTSMNSSSFSD*TTEQAN Trigger: GTTTGCCTGTTCCGTTGTTCAATCAGAAAAAGAGGA...CGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | AATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATATGAATGTGTTTGTCTaGGTAGCTCGGTTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVLFLVIVANTSMNSASNMNVFV*VARFLC Trigger: ACAAAGAAACCGAGCTACTCAGACAAACACATTCAT...ATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | TTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCCTTAAACTGTAACTaGTACAATGAGGTTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LENVLFLVIVANTSMNSASLNCN*YNEVSF Trigger: GAAGGAAACCTCATTGTATCAGTTACAGTTTAAGGA...GGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | AACACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTTGCCAACACATCTATaGACTCGGCCTCTAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: NTLENVLFLVIVANTSMNLPTHL*TRPLIS Trigger: ACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAA...GTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR GCA 90 bp | ACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGTTGGTGGCATTGGTGTaGAAAAAGTGTGCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TLENVLFLVIVANTSMNSLVALV*KKCAQS Trigger: AGATTGAGCACACTTTTTGCACACCAATGCCACCAA...CGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR GCA 90 bp | ATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCAAGTACAGTTTTCTGTaGATGTTCACGCCAATACTT | + |
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Preference number: 4 (lower is better) Translates to: IGKCSFSGHSCQHIYELGKYSFL*MFTPIL Trigger: AAGTATTGGCGTGAACATGCACAGAAAACTGTACTT...GCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | ACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGTCCAAATTTATAATATaGCATTGTCCCACTAGACCC | + |
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Preference number: 4 (lower is better) Translates to: TLENVLFLVIVANTSMNSSKFII*HCPTRP Trigger: GGGTCTAGTGGGACAATGTCATATTATAAATTTGGA...CGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR TCA 90 bp | AACACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACAGGGGTACTGATACCTaGATCATCTTTAAGTGGATT | + |
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Preference number: 4 (lower is better) Translates to: NTLENVLFLVIVANTSMNRGTDT*IIFKWI Trigger: AATCCACTTAAAGATGATTCAGGTATCAGTACCCCT...GTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR GCA 90 bp | AACACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTTTTCTGGTCATAGTTaGCAACACATCTATGAACTC | + |
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Preference number: 4 (lower is better) Translates to: NTLENVLFLVIVANTSMNFSGHS*QHIYEL Trigger: GAGTTCATAGATGTGTTGGCAACTATGACCAGAAAA...GTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS CCA 90 bp | CGGGAATCAGGCTGTTCGCAGGCGCCGTGGACCGCGCAGGCGCAGTaGCCGCCACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: RESGCSQAPWTAQAQ*PPPRRDGIFAACLA Trigger: GGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTGGCGGCCACTGCGCCTGCGCGGTCCACGGCGCCTGCGAACAGCCTGATTCCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000573128.5 ENST00000574457.1 |
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| CDS CCA 90 bp | CGCAGTGGCCGCCACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTaGCCGCCCTTGGCCGGGCGCGATGACGTTAACGCTCTTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: RSGRHLGAMASSLPA*PPLAGRDDVNALPW Trigger: CCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTGGCGGCCACTGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000573128.5 ENST00000574457.1 |
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| CDS CCA 90 bp | GCCACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTGGCCGCCCTTaGCCGGGCGCGATGACGTTAACGCTCTTCCTTGGCGTTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: ATSARWHLRCLPGRP*PGAMTLTLFLGVLT Trigger: TGTGAGAACGCCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000573128.5 ENST00000574457.1 |
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| CDS CCA 90 bp | ATTGTCCCACTAGACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTaGCCGCCCTTGGCCGGGCGCGATGACGTTAACGCTCTTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: IVPLDLGAMASSLPA*PPLAGRDDVNALPW Trigger: CCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTCTAGTGGGACAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572582.5 |
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| CDS TCA 90 bp | TGTCCCACTAGACCGCGGTGGGAGAGAAGAGGCTCCAGTCCGAGTTaGGACGCTCTTCCAAAGGCCTCTCCTGACCCGCCCACGGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: CPTRPRWERRGSSPS*DALPKASPDPPTEW Trigger: CCACTCCGTGGGCGGGTCAGGAGAGGCCTTTGGAAGAGCGTCTCAACTCGGACTGGAGCCTCTTCTCTCCCACCGCGGTCTAGTGGGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397168.7 |
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| CDS GCA 90 bp | CCCCTCACCCCCTGGCCCTTAGGGTCCAGACATCCGTTTGTTAGATaGTGGTGGCCACCCAGAGTGTGCCCAGAGATTGACTCGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: PLTPWPLGSRHPFVR*WWPPRVCPEIDSKA Trigger: GGCCTTCGAGTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATGTCTGGACCCTAAGGGCCAGGGGGTGAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
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| CDS CCA 90 bp | CCAGAGATTGACTCGAAGGCCACCCGAGGTGTCTGGCTCAATTTCTaGGTCGGATCAGGGTCAGGGAATCTGAGTCCCCGGGAGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PEIDSKATRGVWLNF*VGSGSGNLSPREAG Trigger: CCCAGCCTCCCGGGGACTCAGATTCCCTGACCCTGATCCGACCCAGAAATTGAGCCAGACACCTCGGGTGGCCTTCGAGTCAATCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
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| CDS TCA 90 bp | AAGAGGCTCCAGTCCGAGTTGAGACGCTCTTCCAAAGGCCTCTCCTaGCCCGCCCACGGAGTGGGGGCAGTTTGGTATCAACGCACAGTC | + |
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Preference number: 5 (lower is better) Translates to: KRLQSELRRSSKGLS*PAHGVGAVWYQRTV Trigger: GACTGTGCGTTGATACCAAACTGCCCCCACTCCGTGGGCGGGTCAGGAGAGGCCTTTGGAAGAGCGTCTCAACTCGGACTGGAGCCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000268981.9 ENST00000397168.7 |
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| CDS CCA 90 bp | CACACACCACCCACAAAAACCACGGCCTCAAATGGCGGCCTGTTTTaGCTCCTGACCGCGGTGGGAGAGAAGAGGCTCCAGTCCGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: HTPPTKTTASNGGLF*LLTAVGEKRLQSEL Trigger: CAACTCGGACTGGAGCCTCTTCTCTCCCACCGCGGTCAGGAGCCAAAACAGGCCGCCATTTGAGGCCGTGGTTTTTGTGGGTGGTGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS CCA 90 bp | GCACGCACACACACACACACCACCCACAAAAACCACGGCCTCAAATaGCGGCCTGTTTTGGCTCCTGACCGCGGTGGGAGAGAAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ARTHTHTTHKNHGLK*RPVLAPDRGGREEA Trigger: AGCCTCTTCTCTCCCACCGCGGTCAGGAGCCAAAACAGGCCGCCATTTGAGGCCGTGGTTTTTGTGGGTGGTGTGTGTGTGTGTGCGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS CCA 90 bp | ACCCCCTGGCCCTTAGGGTCCAGACATCCGTTTGTTAGATGCTGGTaGCCACCCAGAGTGTGCCCAGAGATTGACTCGAAGGCCACCCGA | + |
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Preference number: 5 (lower is better) Translates to: TPWPLGSRHPFVRCW*PPRVCPEIDSKATR Trigger: TCGGGTGGCCTTCGAGTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATGTCTGGACCCTAAGGGCCAGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
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| CDS CCA 90 bp | CTCACCCCCTGGCCCTTAGGGTCCAGACATCCGTTTGTTAGATGCTaGTGGCCACCCAGAGTGTGCCCAGAGATTGACTCGAAGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: LTPWPLGSRHPFVRC*WPPRVCPEIDSKAT Trigger: GGTGGCCTTCGAGTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATGTCTGGACCCTAAGGGCCAGGGGGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
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| CDS CCA 90 bp | CCCAGAGTGTGCCCAGAGATTGACTCGAAGGCCACCCGAGGTGTCTaGCTCAATTTCTGGGTCGGATCAGGGTCAGGGAATCTGAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: PRVCPEIDSKATRGV*LNFWVGSGSGNLSP Trigger: GGGACTCAGATTCCCTGACCCTGATCCGACCCAGAAATTGAGCCAGACACCTCGGGTGGCCTTCGAGTCAATCTCTGGGCACACTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
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| CDS GCA 90 bp | GGGTCCAGACATCCGTTTGTTAGATGCTGGTGGCCACCCAGAGTGTaGCCAGAGATTGACTCGAAGGCCACCCGAGGTGTCTGGCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: GSRHPFVRCWWPPRV*PEIDSKATRGVWLN Trigger: ATTGAGCCAGACACCTCGGGTGGCCTTCGAGTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATGTCTGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
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| CDS CCA 90 bp | TATGACATTGTCCCACTAGACCTCCGTCCCCCGCACACTCTGGGATaGGATCACGGGTCTCCCACAAATTCAGGCAACCCAGTCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: YDIVPLDLRPPHTLG*DHGSPTNSGNPVTA Trigger: TGCTGTGACTGGGTTGCCTGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTCTAGTGGGACAATGTCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541913.5 |
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| CDS CCA 90 bp | ACGTTAACGCTCTTCCTTGGCGTTCTCACACTGTGGACCCAGGGATaGCTCCAGCTCCTTAGAGTTTTGCCCAGAGAGGAAAGGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: TLTLFLGVLTLWTQG*LQLLRVLPREERRL Trigger: CAGTCTCCTTTCCTCTCTGGGCAAAACTCTAAGGAGCTGGAGCCATCCCTGGGTCCACAGTGTGAGAACGCCAAGGAAGAGCGTTAACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572582.5 ENST00000573128.5 ENST00000574457.1 |
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| CDS CCA 90 bp | TGGTATTTGCCCGGTGTCCACTGTTTTCATTACAGGAGCCAACTCTaGATTCACAGCTTCCCAGGCCCAATCTCCGTCAACCGTCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: WYLPGVHCFHYRSQL*IHSFPGPISVNRRP Trigger: TGGACGACGGTTGACGGAGATTGGGCCTGGGAAGCTGTGAATCCAGAGTTGGCTCCTGTAATGAAAACAGTGGACACCGGGCAAATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574797.5 |
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| CDS-3UTR CAA 90 bp | GAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAAATGGCGGCCTGTTTaGGCTCCTGACCGCGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: ENVLFLVIVANTSMNSASKWRPV*APDRGG Trigger: CCCACCGCGGTCAGGAGCCAAAACAGGCCGCCATTT...AGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CAA 90 bp | GTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGAGGCTCCAGTCCGAGTaGAGACGCTCTTCCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: VLFLVIVANTSMNSASNQRLQSE*RRSSKG Trigger: GCCTTTGGAAGAGCGTCTCAACTCGGACTGGAGCCT...CTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CAA 90 bp | CTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGTCTCGGAAGGTTAAAGACAGAATCTaGACTTCTCAGAGGACGAGA | + |
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Preference number: 5 (lower is better) Translates to: LVIVANTSMNSASNQSRKVKDRI*TSQRTR Trigger: TCTCGTCCTCTGAGAAGTCAAGATTCTGTCTTTAAC...CTTCCGAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000268981.9 |
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| CDS-3UTR CAA 90 bp | TTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGTCTCGGTGTCTAGCCCTCTCATaGTGCAGCCAGATATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLVIVANTSMNSASNQSRCLALS*CSQIFL Trigger: CAAAAATATCTGGCTGCACAATGAGAGGGCTAGACA...CCGAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGTCTCGGGTTTCCTTCAGGGTGTaGTCTTCTGGAATATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FLVIVANTSMNSASNQSRVSFRV*SSGISS Trigger: GGATGATATTCCAGAAGACAACACCCTGAAGGAAAC...CCGAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS-3UTR CAA 90 bp | TTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCATGGGGTTGGTGGCATaGGTGTGCAAAAAGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LENVLFLVIVANTSMNSAMGLVA*VCKKCA Trigger: AGCACACTTTTTGCACACCAATGCCACCAACCCCAT...GGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS TCA 90 bp | GTTACCATCTCTGTAGCTCCAACCACCCTGGCTTCTTCCAGTATTTaGTTGAATAGAGTTAAAGACAGAATCTTGACTTCTCAGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: VTISVAPTTLASSSI*LNRVKDRILTSQRT Trigger: CGTCCTCTGAGAAGTCAAGATTCTGTCTTTAACTCTATTCAATCAAATACTGGAAGAAGCCAGGGTGGTTGGAGCTACAGAGATGGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000268981.9 ENST00000355380.8 ENST00000397168.7 ENST00000541913.5 ENST00000571553.5 ENST00000571607.1 ENST00000572582.5 ENST00000572969.6 ENST00000573128.5 ENST00000574051.5 ENST00000574797.5 ENST00000575375.5 |
||
| CDS TCA 90 bp | TCTTTAAGTGGATTAGAAGTTAATGGCTGTCTGTTCCTCTTTTTCTaGTTGAACAACGGAACAGGCAAACAGCCGATTCCTCCAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSGLEVNGCLFLFF*LNNGTGKQPIPPDG Trigger: GCCATCTGGAGGAATCGGCTGTTTGCCTGTTCCGTTGTTCAATCAGAAAAAGAGGAACAGACAGCCATTAACTTCTAATCCACTTAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571607.1 |
||
| CDS-3UTR CAA 90 bp | AACACATTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACCGGAGTGGGGGCAGTTaGGTATCAACGCACAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NTLENVLFLVIVANTSMNRSGGS*VSTHSL Trigger: AAGACTGTGCGTTGATACCAAACTGCCCCCACTCCG...GTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCTAATCAGTCTTGTAGTGCACTGTTTTaGTCTAGCCCTCTCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLVIVANTSMNSASNQSCSALF*SSPLIV Trigger: CACAATGAGAGGGCTAGACAAAAACAGTGCACTACA...AGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS TCA 90 bp | TCTTTAAGTGGATTAGAAGTTAATGGCTGTCTGTTCCTCTTTTTCTaGTTGAACAACGGAACAGGCAAACAGCCTGCTGTACTTCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSGLEVNGCLFLFF*LNNGTGKQPAVLRA Trigger: AGCTCGAAGTACAGCAGGCTGTTTGCCTGTTCCGTTGTTCAATCAGAAAAAGAGGAACAGACAGCCATTAACTTCTAATCCACTTAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000268981.9 ENST00000397168.7 ENST00000541913.5 ENST00000572582.5 ENST00000572969.6 ENST00000573128.5 ENST00000574457.1 ENST00000575375.5 |
||
| CDS-3UTR CAA 90 bp | TTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCAGCTCGGTTTCTTTGTaGCGAGATAAGTTAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LENVLFLVIVANTSMNSASSVSL*RDKLGG Trigger: ACCTCCTAACTTATCTCGCAACAAAGAAACCGAGCT...GGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCTCAGTAGCTCGGTTTCTTaGTTGCGAGATAAGTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKCSFSGHSCQHIYELGLSSSVS*LRDKLG Trigger: TCCTAACTTATCTCGCAACAAAGAAACCGAGCTACT...GAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS-3UTR CAA 90 bp | TTGGAAAATGTTCTTTTTCTGGTCATAGTTGCCAACACATCTATGAACTCGGCCCATTTGCCACTAAGTTaGTTCGTTTACATTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LENVLFLVIVANTSMNSAHLPLS*FVYIEA Trigger: AGCCTCAATGTAAACGAACAAACTTAGTGGCAAATG...GGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS TCA 90 bp | TCTTTAAGTGGATTAGAAGTTAATGGCTGTCTGTTCCTCTTTTTCTaGTTGAACAACGGAACAGGCAAACAGCTATTATCTTCATTATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSGLEVNGCLFLFF*LNNGTGKQLLSSLC Trigger: GCATAATGAAGATAATAGCTGTTTGCCTGTTCCGTTGTTCAATCAGAAAAAGAGGAACAGACAGCCATTAACTTCTAATCCACTTAAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574051.5 |
||
| CDS CCA 72 bp | GGCTGTTCGCAGGCGCCGTGGACCGCGCAGGCGCAGTaGCCGCCACCTCGGCGCGATGGCATCTTCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCSQAPWTAQAQ*PPPRRDGIFAA Trigger: GGCAGCGAAGATGCCATCGCGCCGAGGTGGCGGCCACTGCGCCTGCGCGGTCCACGGCGCCTGCGAACAGCC 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000573128.5 ENST00000574457.1 |
||
| CDS CCA 72 bp | CGCCACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTaGCCGCCCTTGGCCGGGCGCGATGACGTTAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: RHLGAMASSLPA*PPLAGRDDVNA Trigger: AGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000573128.5 ENST00000574457.1 |
||
| CDS CAA 90 bp | CGCCACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTGGCCGCCCTaGGCCGGGCGCGATGACGTTAACGCTCTTCCTTGGCGTTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RHLGAMASSLPAWPP*AGRDDVNALPWRSH Trigger: GTGAGAACGCCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000573128.5 ENST00000574457.1 |
||
| CDS CCA 72 bp | GCGCGATGGCATCTTCGCTGCCTGCCTGGCCGCCCTTaGCCGGGCGCGATGACGTTAACGCTCTTCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARWHLRCLPGRP*PGAMTLTLFLG Trigger: GCCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572582.5 ENST00000573128.5 ENST00000574457.1 |
||
| CDS CCA 72 bp | CTAGACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTaGCCGCCCTTGGCCGGGCGCGATGACGTTAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: LDLGAMASSLPA*PPLAGRDDVNA Trigger: AGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTCTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572582.5 |
||
| CDS CAA 72 bp | GGCGCGATGGCATCTTCGCTGCCTGCCTGGCCGCCCTaGGCCGGGCGCGATGACGTTAACGCTCTTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GAMASSLPAWPP*AGRDDVNALPW Trigger: CCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572582.5 ENST00000573128.5 ENST00000574457.1 |
||
| CDS CAA 90 bp | CTAGACCTCGGCGCGATGGCATCTTCGCTGCCTGCCTGGCCGCCCTaGGCCGGGCGCGATGACGTTAACGCTCTTCCTTGGCGTTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LDLGAMASSLPAWPP*AGRDDVNALPWRSH Trigger: GTGAGAACGCCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGGCGGCCAGGCAGGCAGCGAAGATGCCATCGCGCCGAGGTCTAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572582.5 |
||
| CDS TCA 72 bp | AGACCGCGGTGGGAGAGAAGAGGCTCCAGTCCGAGTTaGGACGCTCTTCCAAAGGCCTCTCCTGACCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPRWERRGSSPS*DALPKASPDPP Trigger: GGGCGGGTCAGGAGAGGCCTTTGGAAGAGCGTCTCAACTCGGACTGGAGCCTCTTCTCTCCCACCGCGGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397168.7 |
||
| CDS CCA 72 bp | CCCTTGGCCGGGCGCGATGACGTTAACGCTCTTCCTTaGCGTTCTCACACTGTGGACCCAGGGATGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLAGRDDVNALP*RSHTVDPGMAP Trigger: TGGAGCCATCCCTGGGTCCACAGTGTGAGAACGCCAAGGAAGAGCGTTAACGTCATCGCGCCCGGCCAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572582.5 ENST00000573128.5 ENST00000574457.1 |
||
| CDS CCA 72 bp | GTCCCACTAGACCTCCGTCCCCCGCACACTCTGGGATaGGATCACGGGTCTCCCACAAATTCAGGCAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPLDLRPPHTLG*DHGSPTNSGNP Trigger: TGGGTTGCCTGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTCTAGTGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541913.5 |
||
| CDS CCA 72 bp | GACTCGAAGGCCACCCGAGGTGTCTGGCTCAATTTCTaGGTCGGATCAGGGTCAGGGAATCTGAGTCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: DSKATRGVWLNF*VGSGSGNLSPR Trigger: CCGGGGACTCAGATTCCCTGACCCTGATCCGACCCAGAAATTGAGCCAGACACCTCGGGTGGCCTTCGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
||
| CDS CAA 72 bp | AGGCCTCTCCTGACCCGCCCACGGAGTGGGGGCAGTTaGGTATCAACGCACAGTCTTTCCCTTCTAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPLLTRPRSGGS*VSTHSLSLLGP Trigger: AGGGCCTAGAAGGGAAAGACTGTGCGTTGATACCAAACTGCCCCCACTCCGTGGGCGGGTCAGGAGAGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000268981.9 ENST00000397168.7 |
||
| CDS CAA 90 bp | CTCTTCCAAAGGCCTCTCCTGACCCGCCCACGGAGTGGGGGCAGTTaGGTATCAACGCACAGTCTTTCCCTTCTAGGCCCTCCTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LFQRPLLTRPRSGGS*VSTHSLSLLGPPAN Trigger: GTTGGCAGGAGGGCCTAGAAGGGAAAGACTGTGCGTTGATACCAAACTGCCCCCACTCCGTGGGCGGGTCAGGAGAGGCCTTTGGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000268981.9 ENST00000397168.7 |
||
| CDS TCA 72 bp | CAGTCCGAGTTGAGACGCTCTTCCAAAGGCCTCTCCTaGCCCGCCCACGGAGTGGGGGCAGTTTGGTATCAA | + |
|
Preference number: 6 (lower is better) Translates to: QSELRRSSKGLS*PAHGVGAVWYQ Trigger: TTGATACCAAACTGCCCCCACTCCGTGGGCGGGTCAGGAGAGGCCTTTGGAAGAGCGTCTCAACTCGGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000268981.9 ENST00000397168.7 |
||
| CDS CCA 72 bp | CACACACACACCACCCACAAAAACCACGGCCTCAAATaGCGGCCTGTTTTGGCTCCTGACCGCGGTGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HTHTTHKNHGLK*RPVLAPDRGGR Trigger: TCTCCCACCGCGGTCAGGAGCCAAAACAGGCCGCCATTTGAGGCCGTGGTTTTTGTGGGTGGTGTGTGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS CAA 90 bp | ACACACACCACCCACAAAAACCACGGCCTCAAATGGCGGCCTGTTTaGGCTCCTGACCGCGGTGGGAGAGAAGAGGCTCCAGTCCGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: THTTHKNHGLKWRPV*APDRGGREEAPVRV Trigger: AACTCGGACTGGAGCCTCTTCTCTCCCACCGCGGTCAGGAGCCAAAACAGGCCGCCATTTGAGGCCGTGGTTTTTGTGGGTGGTGTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS GCA 72 bp | CATCCGTTTGTTAGATGCTGGTGGCCACCCAGAGTGTaGCCAGAGATTGACTCGAAGGCCACCCGAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HPFVRCWWPPRV*PEIDSKATRGV Trigger: GACACCTCGGGTGGCCTTCGAGTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
||
| CDS GCA 72 bp | CCCTGGCCCTTAGGGTCCAGACATCCGTTTGTTAGATaGTGGTGGCCACCCAGAGTGTGCCCAGAGATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PWPLGSRHPFVR*WWPPRVCPEID Trigger: GTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATGTCTGGACCCTAAGGGCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
||
| CDS CCA 72 bp | TGCCCAGAGATTGACTCGAAGGCCACCCGAGGTGTCTaGCTCAATTTCTGGGTCGGATCAGGGTCAGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CPEIDSKATRGV*LNFWVGSGSGN Trigger: ATTCCCTGACCCTGATCCGACCCAGAAATTGAGCCAGACACCTCGGGTGGCCTTCGAGTCAATCTCTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
||
| CDS CCA 72 bp | TGGCCCTTAGGGTCCAGACATCCGTTTGTTAGATGCTaGTGGCCACCCAGAGTGTGCCCAGAGATTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: WPLGSRHPFVRC*WPPRVCPEIDS Trigger: CGAGTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATGTCTGGACCCTAAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
||
| CDS CCA 72 bp | CCCTTAGGGTCCAGACATCCGTTTGTTAGATGCTGGTaGCCACCCAGAGTGTGCCCAGAGATTGACTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLGSRHPFVRCW*PPRVCPEIDSK Trigger: CTTCGAGTCAATCTCTGGGCACACTCTGGGTGGCCACCAGCATCTAACAAACGGATGTCTGGACCCTAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572582.5 ENST00000574457.1 |
||
| CDS CAA 90 bp | GTTCTCACACTGTGGACCCAGGGATGGCTCCAGCTCCTTAGAGTTTaGCCCAGAGAGGAAAGGAGACTGTCCTGTGACTGGAGAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: VLTLWTQGWLQLLRV*PREERRLSCDWRDR Trigger: TCTGTCTCTCCAGTCACAGGACAGTCTCCTTTCCTCTCTGGGCAAAACTCTAAGGAGCTGGAGCCATCCCTGGGTCCACAGTGTGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572582.5 ENST00000573128.5 ENST00000574457.1 |
||
| CDS GCA 72 bp | TGTCCCACTAGACAGTCTTTCCCTTCTAGGCCCTCCTaGCAACACGACACACAACTTTCGCCCTCAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CPTRQSFPSRPS*QHDTQLSPSVS Trigger: GGAAACTGAGGGCGAAAGTTGTGTGTCGTGTTGGCAGGAGGGCCTAGAAGGGAAAGACTGTCTAGTGGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571553.5 ENST00000572969.6 |
||
| CDS CCA 72 bp | CCCGGTGTCCACTGTTTTCATTACAGGAGCCAACTCTaGATTCACAGCTTCCCAGGCCCAATCTCCGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PGVHCFHYRSQL*IHSFPGPISVN Trigger: GTTGACGGAGATTGGGCCTGGGAAGCTGTGAATCCAGAGTTGGCTCCTGTAATGAAAACAGTGGACACCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574797.5 |
||
| CDS CCA 72 bp | CCCGGTGTCCACTGTTTTCATTACAGGAGCCAACTCTaGATTCACAGCTTCCCAGGCCCAATCTGCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PGVHCFHYRSQL*IHSFPGPICCT Trigger: AGTACAGCAGATTGGGCCTGGGAAGCTGTGAATCCAGAGTTGGCTCCTGTAATGAAAACAGTGGACACCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355380.8 |
||
| CDS GCA 72 bp | AGTAATGGGGTTGGTGGCATTGGTGTGCAAAAAGTGTaGTCAATCTGCACGCACACACACACACACCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SNGVGGIGVQKV*SICTHTHTHHP Trigger: TGGGTGGTGTGTGTGTGTGTGCGTGCAGATTGAGCACACTTTTTGCACACCAATGCCACCAACCCCATTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS GCA 72 bp | GTTGGTGGCATTGGTGTGCAAAAAGTGTGCTCAATCTaGACGCACACACACACACACCACCCACAAAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: VGGIGVQKVCSI*THTHTHHPQKP Trigger: TGGTTTTTGTGGGTGGTGTGTGTGTGTGTGCGTGCAGATTGAGCACACTTTTTGCACACCAATGCCACCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000268981.9 |
||
| CDS CAA 72 bp | GTGTCTGTAGTGCACTGTTTTTGTCTAGCCCTCTCATaGTGCAGCCAGATATTTTTGATGAATGTGTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSVVHCFCLALS*CSQIFLMNVFV Trigger: GACAAACACATTCATCAAAAATATCTGGCTGCACAATGAGAGGGCTAGACAAAAACAGTGCACTACAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENST00000268981.9 ENST00000355380.8 ENST00000397168.7 ENST00000541913.5 ENST00000571553.5 ENST00000572969.6 ENST00000573128.5 ENST00000574051.5 ENST00000574797.5 ENST00000575375.5 |
||
| CDS CAA 72 bp | CTTAGGGAACTCGAAGGGAAAAGAAGTTCAAAAAGCTaGTGCATTGCTATAGAGCAAGTCAGTGGAAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: LRELEGKRSSKS*CIAIEQVSGRI Trigger: GATTCTTCCACTGACTTGCTCTATAGCAATGCACAAGCTTTTTGAACTTCTTTTCCCTTCGAGTTCCCTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000571607.1 |
||
| CDS TCA 72 bp | TCTGTAGCTCCAACCACCCTGGCTTCTTCCAGTATTTaGTTGAATAGAGTTAAAGACAGAATCTTGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVAPTTLASSSI*LNRVKDRILTS Trigger: AGAAGTCAAGATTCTGTCTTTAACTCTATTCAATCAAATACTGGAAGAAGCCAGGGTGGTTGGAGCTACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000268981.9 ENST00000355380.8 ENST00000397168.7 ENST00000541913.5 ENST00000571553.5 ENST00000571607.1 ENST00000572582.5 ENST00000572969.6 ENST00000573128.5 ENST00000574051.5 ENST00000574797.5 ENST00000575375.5 |
||
| CDS CAA 72 bp | GATGAATGTGTTTGTCTGAGTAGCTCGGTTTCTTTGTaGCGAGATAAGTTAGGAGGTTCAGGTATTCTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: DECVCLSSSVSL*RDKLGGSGILN Trigger: ATTAAGAATACCTGAACCTCCTAACTTATCTCGCAACAAAGAAACCGAGCTACTCAGACAAACACATTCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000268981.9 ENST00000355380.8 ENST00000397168.7 ENST00000541913.5 ENST00000571553.5 ENST00000572969.6 ENST00000573128.5 ENST00000574051.5 ENST00000574797.5 ENST00000575375.5 |
||
| CDS CAA 72 bp | TTTGATGAATGTGTTTGTCTGAGTAGCTCGGTTTCTTaGTTGCGAGATAAGTTAGGAGGTTCAGGTATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FDECVCLSSSVS*LRDKLGGSGIL Trigger: AAGAATACCTGAACCTCCTAACTTATCTCGCAACAAAGAAACCGAGCTACTCAGACAAACACATTCATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000268981.9 ENST00000355380.8 ENST00000397168.7 ENST00000541913.5 ENST00000571553.5 ENST00000572969.6 ENST00000573128.5 ENST00000574051.5 ENST00000574797.5 ENST00000575375.5 |
||
| CDS CAA 90 bp | CCAGATATTTTTGATGAATGTGTTTGTCTGAGTAGCTCGGTTTCTTaGTTGCGAGATAAGTTAGGAGGTTCAGGTATTCTTAATTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PDIFDECVCLSSSVS*LRDKLGGSGILNCF Trigger: AAAACAATTAAGAATACCTGAACCTCCTAACTTATCTCGCAACAAAGAAACCGAGCTACTCAGACAAACACATTCATCAAAAATATCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000268981.9 ENST00000355380.8 ENST00000397168.7 ENST00000541913.5 ENST00000571553.5 ENST00000572969.6 ENST00000573128.5 ENST00000574051.5 ENST00000574797.5 ENST00000575375.5 |
||
| CDS TCA 72 bp | ATTCTTAAAGAACTAGCTTTTTCCTTAAACTGTAACTaGTACAATGAGGTTTCCTTCAGGGTGTTGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ILKELAFSLNCN*YNEVSFRVLSS Trigger: AGAAGACAACACCCTGAAGGAAACCTCATTGTATCAGTTACAGTTTAAGGAAAAAGCTAGTTCTTTAAGAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000268981.9 ENST00000355380.8 ENST00000397168.7 ENST00000541913.5 ENST00000572969.6 ENST00000573128.5 ENST00000575375.5 |
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