Pregenerated sensors for SPATA19 (Homo sapiens)
Ensembl gene IDs: ENSG00000166118Ensembl transcript IDs: ENST00000299140.8, ENST00000532889.1
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTaGTACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PGLALLQVKQRRMFF*YRLLLDPEGLPPGR Trigger: CCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR GCA 90 bp | AGCAAGAAGACTCCAGTGCTGACACTGTCGCATGAAGAGCTCACCTaGTGGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGGTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: SKKTPVLTLSHEELT*WSLSAQVWPFFRSS Trigger: GCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR CCA 90 bp | AAGAAGACTCCAGTGCTGACACTGTCGCATGAAGAGCTCACCTGCTaGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGGTCAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KKTPVLTLSHEELTC*SLSAQVWPFFRSSR Trigger: TCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR TCA 90 bp | CAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTaGAGGACTTCCACCTGGGAGGTAGAGAAATGCCCAGGGGACACA | + |
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Preference number: 1 (lower is better) Translates to: QAEKDVLLIQVAAGP*RTSTWEVEKCPGDT Trigger: TGTGTCCCCTGGGCATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR CCA 90 bp | TTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTaGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATGCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: FRSSREGCSSDTGCC*TLKDFHLGGREMPR Trigger: CCTGGGCATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR CCA 90 bp | CTGTCGCATGAAGAGCTCACCTGCTGGAGTCTTTCTGCCCAGGTCTaGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACA | + |
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Preference number: 1 (lower is better) Translates to: LSHEELTCWSLSAQV*PFFRSSREGCSSDT Trigger: TGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATGCGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR TCA 90 bp | ACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTaGCACTGTCGCATGAAGAGCTCACCTGCTGGAGTCTTTCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: TAHLFIRSSARRLQC*HCRMKSSPAGVFLP Trigger: GGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR GCA 90 bp | TTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTaGTGGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATGCCC | + |
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Preference number: 1 (lower is better) Translates to: FFRSSREGCSSDTGC*WTLKDFHLGGREMP Trigger: GGGCATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR GCA 90 bp | CCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTaGTGCTGGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: PFFRSSREGCSSDTG*CWTLKDFHLGGREM Trigger: CATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCTGGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGATACAGGTTGCTGCTaGACCCTGAAGGACTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TCWSLSAQVWPFFRSSREDTGCC*TLKDFH Trigger: GTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATC...TTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTTCTTCTGATACAGGTTaGTGCTGGACCCTGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: KQHISLFAVQQEDSSADTSSDTG*CWTLKD Trigger: GTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGA...AGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACATCTGATACAGGTTGCTaGTGGACCCTGAAGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: LNSTSLYSQFSKKTPVLTSDTGC*WTLKDF Trigger: GAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGA...TGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR CCA 72 bp | CCAGTGCTGACACTGTCGCATGAAGAGCTCACCTGCTaGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PVLTLSHEELTC*SLSAQVWPFFR Trigger: CCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR GCA 72 bp | ACTCCAGTGCTGACACTGTCGCATGAAGAGCTCACCTaGTGGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: TPVLTLSHEELT*WSLSAQVWPFF Trigger: GAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR TCA 72 bp | GTTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCATaGAGAGCTCACCTGCTGGAGTCTTTCTGCCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: VQQEDSSADTVA*RAHLLESFCPG Trigger: ACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR CCA 72 bp | GAAGAGCTCACCTGCTGGAGTCTTTCTGCCCAGGTCTaGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: EELTCWSLSAQV*PFFRSSREGCS Trigger: AGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR TCA 72 bp | AAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTaGAGGACTTCCACCTGGGAGGTAGAGAAATGCCCA | + |
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Preference number: 3 (lower is better) Translates to: KDVLLIQVAAGP*RTSTWEVEKCP Trigger: TGGGCATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR TCA 72 bp | GCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTaGTACAGGTTGCTGCTGGACCCTGAAGGACTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ALLQVKQRRMFF*YRLLLDPEGLP Trigger: TGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR GCA 72 bp | TCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTaGTGGACCCTGAAGGACTTCCACCTGGGAGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: SSREGCSSDTGC*WTLKDFHLGGR Trigger: TCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| 3UTR CCA 72 bp | AGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTaGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SREGCSSDTGCC*TLKDFHLGGRE Trigger: TTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | GTAGGGCTGATGATGACTCCCTGTAACCCCACTGTTCTCCGCGTTCCCAAAGCTGCTGACACTGTCGCATaGAGAGCTCACCTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VGLMMTPCNPTVLRVPKAADTVA*RAHLLE Trigger: CTCCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGC...AGCTTTGGGAACGCGGAGAACAGTGGGGTTACAGGGAGTCATCATCAGCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | GATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATGTGGATGTCCTGGCCATaGGTGGGAGGGGAGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DTGCCWTLKDFHLGGREMWMSWP*VGGESV Trigger: CACTGACTCCCCTCCCACCCATGGCCAGGACATCCA...CATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGGTCACGTGGATGTCCTaGCCATGGGTGGGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLVTWMS*PWVGGE Trigger: CTCCCCTCCCACCCATGGCCAGGACATCCACGTGAC...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | TTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCATGAAGAGCTCACCTGCTGGTGGGAGGTAGAGAAATaGCCAGGGGACACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FSKKTPVLTLSHEELTCWWEVEK*PGDTAG Trigger: CCCTGCTGTGTCCCCTGGGCATTTCTCTACCTCCCA...CCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | ACCTGCTGGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAACCAGGCCCCCTTCTTaGCTCCCTCCTTCCATTGAA | + |
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Preference number: 4 (lower is better) Translates to: TCWSLSAQVWPFFRSSRETRPPS*LPPSIE Trigger: TTCAATGGAAGGAGGGAGCCAAGAAGGGGGCCTGGT...TTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | ACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATGCCCTTCTCCCTTACACCCTaGGAAGGGTGGTTGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: TGCCWTLKDFHLGGREMPFSLTP*EGWLMD Trigger: GTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAA...GGGCATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGTGGATGTCCTGGCCATaGGTGGGAGGGGAGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLWMSWP*VGGESV Trigger: CACTGACTCCCCTCCCACCCATGGCCAGGACATCCA...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR TCA 90 bp | GATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATGGCTCCCTCCTTCCATTaGAGCTGCCTGAGAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: DTGCCWTLKDFHLGGREMAPSFH*SCLRTP Trigger: AGGAGTTCTCAGGCAGCTTCAATGGAAGGAGGGAGC...CATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | GGTTGCTGCTGGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATGCCCAGGCTATTCGATCTCGCATaGTGTCCTCTGTCATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GCCWTLKDFHLGGREMPRLFDLA*CPLSSH Trigger: GTGAGATGACAGAGGACATCATGCGAGATCGAATAG...CCTGGGCATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGGTTGCTGCTGGACCCTaGAGGACTTCCACCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLVAAGP*RTSTCC Trigger: GCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAAC...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | ACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGGGAGGTAGAGAAATGCCCTCTGATACAGGTTGCTaGTGGACCCTGAAGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: TGCCWTLKDFHLGGREMPSDTGC*WTLKDF Trigger: GAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGA...GGGCATTTCTCTACCTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | ACCTGCTGGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAACACCCTGGGAAGGGTaGTTGATGGACAGCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TCWSLSAQVWPFFRSSRETPWEG*LMDSFS Trigger: GGAAAAGCTGTCCATCAACCACCCTTCCCAGGGTGT...TTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGTCACGTGGATGTCCTaGCCATGGGTGGGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSGPSSGQAEKDVLLIQVVTWMS*PWVGGE Trigger: CTCCCCTCCCACCCATGGCCAGGACATCCACGTGAC...AACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGGCTCCCTCCTTCCATTaGAGCTGCCTGAGAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLAPSFH*SCLRTP Trigger: AGGAGTTCTCAGGCAGCTTCAATGGAAGGAGGGAGC...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR TCA 90 bp | ACCTGCTGGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAAGGAGGGTCTCATACTaGAGTCCTGAGCTGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: TCWSLSAQVWPFFRSSRERRVSY*SPELRH Trigger: ATGTCTCAGCTCAGGACTTCAGTATGAGACCCTCCT...TTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | AGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGTTGCTGCTGGACCCTaGAGGACTTCCACCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSGPSSGQAEKDVLLIQVVAAGP*RTSTWE Trigger: CTCCCAGGTGGAAGTCCTTCAGGGTCCAGCAGCAAC...AACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCACCAGGCCCCCTTCTTaGCTCCCTCCTTCCATTGAA | + |
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Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLTRPPS*LPPSIE Trigger: TTCAATGGAAGGAGGGAGCCAAGAAGGGGGCCTGGT...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCACATCTCTGGTCACGTaGATGTCCTGGCCATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLTSLVT*MSWPWV Trigger: CACCCATGGCCAGGACATCCACGTGACCAGAGATGT...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCGCTTCACCACATCTCTaGTCACGTGGATGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLASPHL*SRGCPG Trigger: GCCAGGACATCCACGTGACCAGAGATGTGGTGAAGC...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR TCA 90 bp | TTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCATGAAGAGCTCACCTGCTGGCCTGGGAAGGGTGGTTaGTGGACAGCTTTTCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: FSKKTPVLTLSHEELTCWPGKGG*WTAFPL Trigger: TAAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGG...CCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCTCCATTGAAGCTGCCTaGGAACTCCTATGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLSIEAA*ELLWDR Trigger: CCTGTCCCATAGGAGTTCTCAGGCAGCTTCAATGGA...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | TTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCATGAAGAGCTCACCTGCTGGCAAAGCTCCATCTGTTaGTCTCAGCAGTCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FSKKTPVLTLSHEELTCWQSSIC*SQQSEE Trigger: CTCCTCAGACTGCTGAGAGCAACAGATGGAGCTTTG...CCAGCAGGTGAGCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCTTCTCCCTTACACCCTaGGAAGGGTGGTTGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLFSLTP*EGWLMD Trigger: GTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAA...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCTGGGAGGGGAGTCAGTaGACATCTTCTCCCTTACAC | + |
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Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLWEGSQ*TSSPLH Trigger: GTGTAAGGGAGAAGATGTCCACTGACTCCCCTCCCA...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGGATACAGGTTGCTGCTaGACCCTGAAGGACTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLDTGCC*TLKDFH Trigger: GTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATC...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR TCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCAGGAGGGTCTCATACTaGAGTCCTGAGCTGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLRRVSY*SPELRH Trigger: ATGTCTCAGCTCAGGACTTCAGTATGAGACCCTCCT...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGGACTTAGAGAGGTGGTaGTTCACCACATCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLDLERW*FTTSLV Trigger: GACCAGAGATGTGGTGAAGCACCACCTCTCTAAGTC...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | GGAGATGTGGTTGGCCAAGGGGTAGGGCTGATGATGACTCCCTGTAACCCCACTCTCTTGGCTCTGGTTTaGCAACAAATCAGACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: GDVVGQGVGLMMTPCNPTLLALV*QQIRLR Trigger: TCTAAGTCTGATTTGTTGGCAAACCAGAGCCAAGAG...AGTGGGGTTACAGGGAGTCATCATCAGCCCTACCCCTTGGCCAACCACATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR GCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGTCTGATACAGGTTGCTaGTGGACCCTGAAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLSDTGC*WTLKDF Trigger: GAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGA...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGTCTTCTGATACAGGTTaGTGCTGGACCCTGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLSSDTG*CWTLKD Trigger: GTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGA...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | AGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTCTGCTGGAGTCTTTCTaGCCAGGTCTGGCCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSGPSSGQAEKDVLLIQVLLESF*PGLALL Trigger: AAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAG...AACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | CACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCAGCTTCACCACATCTCTaGTCACGTGGATGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HISLFAVQQEDSSADTVAASPHL*SRGCPG Trigger: GCCAGGACATCCACGTGACCAGAGATGTGGTGAAGC...TGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | ATGACTCCCTGTAACCCCACTGTTCTCCGCGTTCCCAAAGCTCCATCTGTTGCTTCCTCTAGGACCTCTTaGCTCTGGTTTGCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: MTPCNPTVLRVPKAPSVASSRTS*LWFANK Trigger: TTTGTTGGCAAACCAGAGCCAAGAGGTCCTAGAGGA...AGCAACAGATGGAGCTTTGGGAACGCGGAGAACAGTGGGGTTACAGGGAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | CACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCACTTTCTGCCCAGGTCTaGCCCTTCTTCAGGTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HISLFAVQQEDSSADTVALSAQV*PFFRSS Trigger: GCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAG...TGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | CACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCAGAAGAGCTCACCTGCTaGAGTCTTTCTGCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HISLFAVQQEDSSADTVAEELTC*SLSAQV Trigger: GACCTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTC...TGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCCTATTCGATCTCGCATaGTGTCCTCTGTCATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLLFDLA*CPLSSH Trigger: GTGAGATGACAGAGGACATCATGCGAGATCGAATAG...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR TCA 90 bp | AGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTAGAAGACTCCAGTGCTaGCACTGTCGCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGPSSGQAEKDVLLIQVRRLQC*HCRMKS Trigger: GCTCTTCATGCGACAGTGTCAGCACTGGAGTCTTCT...AACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGGACTTAGAGAGGTGGTaGTTCACCACATCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRSSREGCSSDTGCCWTLDLERW*FTTSLV Trigger: GACCAGAGATGTGGTGAAGCACCACCTCTCTAAGTC...CAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR GCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGATGCTTCGTCTCACCTaGTCTATTCGATCTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLMLRLT*SIRSRM Trigger: CATGCGAGATCGAATAGAGCAGGTGAGACGAAGCAT...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | AGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTCATGAAGAGCTCACCTaGTGGAGTCTTTCTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSGPSSGQAEKDVLLIQVHEELT*WSLSAQ Trigger: CTGGGCAGAAAGACTCCAGCAGGTGAGCTCTTCATG...AACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | ATGACTCCCTGTAACCCCACTGTTCTCCGCGTTCCCAAAGCTCCATCTGTTGCTCGTCAATGTCCGAACTaGTTATTGGTAGGAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MTPCNPTVLRVPKAPSVARQCPN*LLVGRE Trigger: TTCCCTTCCTACCAATAACCAGTTCGGACATTGACG...AGCAACAGATGGAGCTTTGGGAACGCGGAGAACAGTGGGGTTACAGGGAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGTCAGACTTAGAGAGGTaGTGCTTCACCACATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLSDLER*CFTTSL Trigger: CAGAGATGTGGTGAAGCACCACCTCTCTAAGTCTGA...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGAGGACCTCTTGGCTCTaGTTTGCCAACAAATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLRTSWL*FANKSD Trigger: GTCTGATTTGTTGGCAAACCAGAGCCAAGAGGTCCT...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGTCCTCTAGGACCTCTTaGCTCTGGTTTGCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLSSRTS*LWFANK Trigger: TTTGTTGGCAAACCAGAGCCAAGAGGTCCTAGAGGA...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCATCTCACTTGGCACTTaGAAGATACGAGTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLISLGT*KIRVWL Trigger: GAGCCACACTCGTATCTTCCAAGTGCCAAGTGAGAT...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | AGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGATACAGGTTGCTGCTaGACCCTGAAGGACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGPSSGQAEKDVLLIQVDTGCC*TLKDFH Trigger: GTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATC...AACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGTGTGGCTCCATCTTATaGACTGGATTCGTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLCGSIL*TGFVFS Trigger: AGAGAACACGAATCCAGTTCATAAGATGGAGCCACA...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR GCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGACAGCTTTTCCTTTATaGCCCGAGAAGCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLTAFPL*PEKPLL Trigger: AAGAAGAGGCTTCTCGGGGCATAAAGGAAAAGCTGT...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCCGTCAATGTCCGAACTaGTTATTGGTAGGAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLRQCPN*LLVGRE Trigger: TTCCCTTCCTACCAATAACCAGTTCGGACATTGACG...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | AAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTACATCTCTGGTCACGTaGATGTCCTGGCCATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQHISLFAVQQEDSSADTTSLVT*MSWPWV Trigger: CACCCATGGCCAGGACATCCACGTGACCAGAGATGT...AGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCTGTCATCTCACTTaGCACTTGGAAGATACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLLCHLT*HLEDTS Trigger: ACTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAG...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR TCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCGTAATTATCATCTTTaGATGTATACCAGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLRNYHL*MYTRPP Trigger: AGGGGGCCTGGTATACATTCAAAGATGATAATTACG...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR TCA 90 bp | TTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCAGAAGGATGTTCTTCTaGTACAGGTTGCTGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFRSSREGCSSDTGCCWTRRMFF*YRLLLD Trigger: GTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCT...GGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR GCA 90 bp | AGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTATGCTTCGTCTCACCTaGTCTATTCGATCTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSGPSSGQAEKDVLLIQVMLRLT*SIRSRM Trigger: CATGCGAGATCGAATAGAGCAGGTGAGACGAAGCAT...AACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAAGGGCCAGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | AAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTTGGGAGGGGAGTCAGTaGACATCTTCTCCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KQHISLFAVQQEDSSADTWEGSQ*TSSPLH Trigger: GTGTAAGGGAGAAGATGTCCACTGACTCCCCTCCCA...AGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | TTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCTCAGACTTAGAGAGGTaGTGCTTCACCACATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFRSSREGCSSDTGCCWTSDLER*CFTTSL Trigger: CAGAGATGTGGTGAAGCACCACCTCTCTAAGTCTGA...GGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCCATCTTATGAACTaGATTCGTGTTCTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLLHLMN*IRVLSS Trigger: AGAGGAGAGAACACGAATCCAGTTCATAAGATGGAG...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CCA 90 bp | TTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGCTCTGTCATCTCACTTaGCACTTGGAAGATACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRSSREGCSSDTGCCWTLLCHLT*HLEDTS Trigger: ACTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAG...CAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | TTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCTGTGGCTCCATCTTATaGACTGGATTCGTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFRSSREGCSSDTGCCWTCGSIL*TGFVFS Trigger: AGAGAACACGAATCCAGTTCATAAGATGGAGCCACA...GGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR GCA 90 bp | TTCTTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCACAGCTTTTCCTTTATaGCCCGAGAAGCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFRSSREGCSSDTGCCWTTAFPL*PEKPLL Trigger: AAGAAGAGGCTTCTCGGGGCATAAAGGAAAAGCTGT...GGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | AAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTAGGACCTCTTGGCTCTaGTTTGCCAACAAATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQHISLFAVQQEDSSADTRTSWL*FANKSD Trigger: GTCTGATTTGTTGGCAAACCAGAGCCAAGAGGTCCT...AGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | TTAAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACAATCTCACTTGGCACTTaGAAGATACGAGTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNSTSLYSQFSKKTPVLTISLGT*KIRVWL Trigger: GAGCCACACTCGTATCTTCCAAGTGCCAAGTGAGAT...TGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CCA 90 bp | AAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTCTCCATCTTATGAACTaGATTCGTGTTCTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQHISLFAVQQEDSSADTLHLMN*IRVLSS Trigger: AGAGGAGAGAACACGAATCCAGTTCATAAGATGGAG...AGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR TCA 90 bp | TTAAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACGTAATTATCATCTTTaGATGTATACCAGGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSTSLYSQFSKKTPVLTRNYHL*MYTRPP Trigger: AGGGGGCCTGGTATACATTCAAAGATGATAATTACG...TGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS CCA 90 bp | AGGTGGTGCTTCACCACATCTCTGGTCACGTGGATGTCCTGGCCATaGGTGGGAGGGGAGTCAGTGGACATCTTCTCCCTTACACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWCFTTSLVTWMSWP*VGGESVDIFSLTPW Trigger: CCAGGGTGTAAGGGAGAAGATGTCCACTGACTCCCCTCCCACCCATGGCCAGGACATCCACGTGACCAGAGATGTGGTGAAGCACCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS-3UTR CAA 90 bp | GGAGATGTGGTTGGCCAAGGGGTAGGGCTGATGATGACTCCCTGTAACCCCACTGGCTCCCTCCTTCCATaGAAGCTGCCTGAGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDVVGQGVGLMMTPCNPTGSLLP*KLPENS Trigger: GGAGTTCTCAGGCAGCTTCAATGGAAGGAGGGAGCC...AGTGGGGTTACAGGGAGTCATCATCAGCCCTACCCCTTGGCCAACCACATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCGGCTCCCTCCTTCCATaGAAGCTGCCTGAGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLGSLLP*KLPENS Trigger: GGAGTTCTCAGGCAGCTTCAATGGAAGGAGGGAGCC...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS TCA 90 bp | GGGAGTCAGTGGACATCTTCTCCCTTACACCCTGGGAAGGGTGGTTaGTGGACAGCTTTTCCTTTATGCCCCGAGAAGCCTCTTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQWTSSPLHPGKGG*WTAFPLCPEKPLLL Trigger: CAGAAGAAGAGGCTTCTCGGGGCATAAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAAGATGTCCACTGACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGGAGTCTTTCTGCCCAGGTCTGGCCCTTCTTCAGGTCAAGCAGAGAATGTCCGAACTGGTTATaGGTAGGAAGGGAAGCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: TCWSLSAQVWPFFRSSRECPNWL*VGREAL Trigger: TAGGGCTTCCCTTCCTACCAATAACCAGTTCGGACA...TTCTCTGCTTGACCTGAAGAAGGGCCAGACCTGGGCAGAAAGACTCCAGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS TCA 90 bp | TGTTGCTCTCAGCAGTCTGAGGAGGAGGGTCTCATACTGAAGTCCTaGGCTGAGACATCTGTAAGACGGGATATGCTTCGTCTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCSQQSEEEGLILKS*AETSVRRDMLRLTC Trigger: GCAGGTGAGACGAAGCATATCCCGTCTTACAGATGTCTCAGCTCAGGACTTCAGTATGAGACCCTCCTCCTCAGACTGCTGAGAGCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS-3UTR CAA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCTGTCCGAACTGGTTATaGGTAGGAAGGGAAGCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLCPNWL*VGREAL Trigger: TAGGGCTTCCCTTCCTACCAATAACCAGTTCGGACA...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CAA 90 bp | TTCAGGTCAAGCAGAGAAGGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGCCCTGGGAAGGGTGGTaGATGGACAGCTTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FRSSREGCSSDTGCCWTLPWEGW*MDSFSF Trigger: AAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGGG...CAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCCTTCTCTGCTTGACCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299140.8 |
||
| CDS-3UTR CAA 90 bp | GGATGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCATCTCACTTGGCACTaGGAAGATACGAGTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GCSSDTGCCWTLKDFHLLHLTWH*EDTSVA Trigger: AGCCACACTCGTATCTTCCAAGTGCCAAGTGAGATG...CAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CAA 90 bp | TGTTCTTCTGATACAGGTTGCTGCTGGACCCTGAAGGACTTCCACCTGTTGCTCCCTCTGTCATCTCACTaGGCACTTGGAAGATACGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSDTGCCWTLKDFHLLLPLSSH*ALGRYE Trigger: CTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAGG...GAGCAACAGGTGGAAGTCCTTCAGGGTCCAGCAGCAACCTGTATCAGAAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532889.1 |
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| CDS-3UTR CAA 90 bp | CACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTGTCGCACCTCTGTCATCTCACTaGGCACTTGGAAGATACGAG | + |
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Preference number: 5 (lower is better) Translates to: HISLFAVQQEDSSADTVAPLSSH*ALGRYE Trigger: CTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAGG...TGCGACAGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS CCA 90 bp | CTTATGAACTGGATTCGTGTTCTCTCCTCTAGGACCTCTTGGCTCTaGTTTGCCAACAAATCAGACTTAGAGAGGTGGTGCTTCACCACA | + |
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Preference number: 5 (lower is better) Translates to: LMNWIRVLSSRTSWL*FANKSDLERWCFTT Trigger: TGTGGTGAAGCACCACCTCTCTAAGTCTGATTTGTTGGCAAACCAGAGCCAAGAGGTCCTAGAGGAGAGAACACGAATCCAGTTCATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 90 bp | CTCCATCTTATGAACTGGATTCGTGTTCTCTCCTCTAGGACCTCTTaGCTCTGGTTTGCCAACAAATCAGACTTAGAGAGGTGGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LHLMNWIRVLSSRTS*LWFANKSDLERWCF Trigger: GAAGCACCACCTCTCTAAGTCTGATTTGTTGGCAAACCAGAGCCAAGAGGTCCTAGAGGAGAGAACACGAATCCAGTTCATAAGATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 90 bp | CACCTGCTCTATTCGATCTCGCATGATGTCCTCTGTCATCTCACTTaGCACTTGGAAGATACGAGTGTGGCTCCATCTTATGAACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: HLLYSISHDVLCHLT*HLEDTSVAPSYELD Trigger: ATCCAGTTCATAAGATGGAGCCACACTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAGGACATCATGCGAGATCGAATAGAGCAGGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS-3UTR CAA 90 bp | AAACAGCACATCTCTTTATTCGCAGTTCAGCAAGAAGACTCCAGTGCTGACACTCATCTCACTTGGCACTaGGAAGATACGAGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: KQHISLFAVQQEDSSADTHLTWH*EDTSVA Trigger: AGCCACACTCGTATCTTCCAAGTGCCAAGTGAGATG...AGTGTCAGCACTGGAGTCTTCTTGCTGAACTGCGAATAAAGAGATGTGCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299140.8 |
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| CDS TCA 90 bp | TTTCCGAGCAAGAATATACACAATCCATGTCGTAATTATCATCTTTaGATGTATACCAGGCCCCCTTCTTGGCTCCCTCCTTCCATTGAA | + |
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Preference number: 5 (lower is better) Translates to: FPSKNIHNPCRNYHL*MYTRPPSWLPPSIE Trigger: TTCAATGGAAGGAGGGAGCCAAGAAGGGGGCCTGGTATACATTCAAAGATGATAATTACGACATGGATTGTGTATATTCTTGCTCGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 72 bp | TTAGAGAGGTGGTGCTTCACCACATCTCTGGTCACGTaGATGTCCTGGCCATGGGTGGGAGGGGAGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LERWCFTTSLVT*MSWPWVGGESV Trigger: CACTGACTCCCCTCCCACCCATGGCCAGGACATCCACGTGACCAGAGATGTGGTGAAGCACCACCTCTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 72 bp | TTCACCACATCTCTGGTCACGTGGATGTCCTGGCCATaGGTGGGAGGGGAGTCAGTGGACATCTTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: FTTSLVTWMSWP*VGGESVDIFSL Trigger: AAGGGAGAAGATGTCCACTGACTCCCCTCCCACCCATGGCCAGGACATCCACGTGACCAGAGATGTGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CAA 72 bp | GTGGACATCTTCTCCCTTACACCCTGGGAAGGGTGGTaGATGGACAGCTTTTCCTTTATGCCCCGAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VDIFSLTPWEGW*MDSFSFMPREA Trigger: GGCTTCTCGGGGCATAAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAAGATGTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS TCA 72 bp | TGGACATCTTCTCCCTTACACCCTGGGAAGGGTGGTTaGTGGACAGCTTTTCCTTTATGCCCCGAGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: WTSSPLHPGKGG*WTAFPLCPEKP Trigger: AGGCTTCTCGGGGCATAAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAAGATGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 72 bp | GGAGGGGAGTCAGTGGACATCTTCTCCCTTACACCCTaGGAAGGGTGGTTGATGGACAGCTTTTCCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: GGESVDIFSLTP*EGWLMDSFSFM Trigger: CATAAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAAGATGTCCACTGACTCCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS TCA 72 bp | CAGCAGTCTGAGGAGGAGGGTCTCATACTGAAGTCCTaGGCTGAGACATCTGTAAGACGGGATATGCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: QQSEEEGLILKS*AETSVRRDMLR Trigger: ACGAAGCATATCCCGTCTTACAGATGTCTCAGCTCAGGACTTCAGTATGAGACCCTCCTCCTCAGACTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 72 bp | TCAGTGGACATCTTCTCCCTTACACCCTGGGAAGGGTaGTTGATGGACAGCTTTTCCTTTATGCCCCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SVDIFSLTPWEG*LMDSFSFMPRE Trigger: TTCTCGGGGCATAAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAAGATGTCCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 72 bp | TGGATTCGTGTTCTCTCCTCTAGGACCTCTTGGCTCTaGTTTGCCAACAAATCAGACTTAGAGAGGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: WIRVLSSRTSWL*FANKSDLERWC Trigger: GCACCACCTCTCTAAGTCTGATTTGTTGGCAAACCAGAGCCAAGAGGTCCTAGAGGAGAGAACACGAATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS TCA 72 bp | ATATGCTTCGTCTCACCTGCTCTATTCGATCTCGCATaGTGTCCTCTGTCATCTCACTTGGCACTTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: ICFVSPALFDLA*CPLSSHLALGR Trigger: TCTTCCAAGTGCCAAGTGAGATGACAGAGGACATCATGCGAGATCGAATAGAGCAGGTGAGACGAAGCATAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 72 bp | ATGAACTGGATTCGTGTTCTCTCCTCTAGGACCTCTTaGCTCTGGTTTGCCAACAAATCAGACTTAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: MNWIRVLSSRTS*LWFANKSDLER Trigger: CCTCTCTAAGTCTGATTTGTTGGCAAACCAGAGCCAAGAGGTCCTAGAGGAGAGAACACGAATCCAGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CAA 72 bp | ATCTCGCATGATGTCCTCTGTCATCTCACTTGGCACTaGGAAGATACGAGTGTGGCTCCATCTTATGAACTG | + |
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Preference number: 6 (lower is better) Translates to: ISHDVLCHLTWH*EDTSVAPSYEL Trigger: CAGTTCATAAGATGGAGCCACACTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAGGACATCATGCGAGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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| CDS CCA 72 bp | TATTCGATCTCGCATGATGTCCTCTGTCATCTCACTTaGCACTTGGAAGATACGAGTGTGGCTCCATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: YSISHDVLCHLT*HLEDTSVAPSY Trigger: ATAAGATGGAGCCACACTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAGGACATCATGCGAGATCGAATA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299140.8 ENST00000532889.1 |
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