RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPATA18 (Homo sapiens)

Ensembl gene IDs: ENSG00000163071

Ensembl transcript IDs: ENST00000295213.9, ENST00000419395.6, ENST00000503055.5, ENST00000505038.1, ENST00000505320.5, ENST00000506829.5, ENST00000508915.5, ENST00000510549.1, ENST00000511028.1, ENST00000514670.1

Found 423 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACATCCAATGACAACACCGTGATTTTCTGTTGCCAATACACACATTaGTTTTCATTTGTAGCTGGTGGCTCTACATGCAGGTTCAGCCAT +
Preference number: 1 (lower is better)
Translates to: TSNDNTVIFCCQYTH*FSFVAGGSTCRFSH
Trigger: ATGGCTGAACCTGCATGTAGAGCCACCAGCTACAAATGAAAATCAATGTGTGTATTGGCAACAGAAAATCACGGTGTTGTCATTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR TCA 90 bp CTTAAATTATCTTCTACACTTAGCCTTAAGTCACTGCTACTAACATaGGCTCCCCAACCTGAGATTAGGGCTGTCTTCCAAACCTTAAAA +
Preference number: 1 (lower is better)
Translates to: LKLSSTLSLKSLLLT*APQPEIRAVFQTLK
Trigger: TTTTAAGGTTTGGAAGACAGCCCTAATCTCAGGTTGGGGAGCTCATGTTAGTAGCAGTGACTTAAGGCTAAGTGTAGAAGATAATTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR TCA 90 bp CACACAGTTCCCATAAAAGAGCGTAGTGTTTTGAGATGGAAATCTTaGACCTTTGTAACGGACTTTGCTTCGAATGAATATGATCCTAAA +
Preference number: 1 (lower is better)
Translates to: HTVPIKERSVLRWKS*TFVTDFASNEYDPK
Trigger: TTTAGGATCATATTCATTCGAAGCAAAGTCCGTTACAAAGGTTCAAGATTTCCATCTCAAAACACTACGCTCTTTTATGGGAACTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR TCA 90 bp CAACGTATAACACACAGTAACTGTTGCATAGTTTTAATAAACACTTaGATTTTCCAGGAATGTGACTGCTGTGTAAATCAGGGCAAGACT +
Preference number: 1 (lower is better)
Translates to: QRITHSNCCIVLINT*IFQECDCCVNQGKT
Trigger: AGTCTTGCCCTGATTTACACAGCAGTCACATTCCTGGAAAATTCAAGTGTTTATTAAAACTATGCAACAGTTACTGTGTGTTATACGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAGCTGTTTCCACGCACTaGGTCAAAGGAGCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: WSTKPNWALSKSERKSKPAVSTH*VKGAGL
Trigger: CAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGC...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR-3UTR CCA 90 bp AATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGGGCTACGGGGGCAAATaGGACTTAAACTCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: NLGNPHLIGEGLRLRDIVGYGGK*DLNSCF
Trigger: GAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCC...CACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
3UTR-3UTR CCA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAAGACAGATGGCGGCACTaGAGAAAGCAGCTGTTTCCA +
Preference number: 2 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQDRWRH*RKQLFP
Trigger: TGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTC...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR-3UTR CCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGACAGATGGCGGCACTaGAGAAAGCAGCTGTTTCCA +
Preference number: 2 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNDRWRH*RKQLFP
Trigger: TGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR-3UTR CCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGACACAGAAGACAGATaGCGGCACTGGAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNDTEDR*RHWRKQ
Trigger: CTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTGTC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR-3UTR TCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACTCACTGCTACTAACATaGGCTCCCCAACCTGAGATT +
Preference number: 2 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNSLLLT*APQPEI
Trigger: AATCTCAGGTTGGGGAGCTCATGTTAGTAGCAGTGA...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR-3UTR GCA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAAAGCACAGGGGTAAGATaGTTTAGAGAAGCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQSTGVR*FREAVC
Trigger: ACAAACAGCTTCTCTAAAGCATCTTACCCCTGTGCT...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR-3UTR TCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTACTCTCTGTGTGGGGTaGTACACAGAATTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSTLCVG*YTELPF
Trigger: AAAAGGCAATTCTGTGTATCACCCCACACAGAGAGT...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR-3UTR TCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACACTCTCTGTGTGGGGTaGTACACAGAATTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNTLCVG*YTELPF
Trigger: AAAAGGCAATTCTGTGTATCACCCCACACAGAGAGT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR-3UTR TCA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTTTCAGAATGAGGTGGTaGCCATTAGACTCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLFRMRW*PLDSRG
Trigger: GCCCCTTGAGTCTAATGGTCACCACCTCATTCTGAA...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR-3UTR TCA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTTCACTGCTACTAACATaGGCTCCCCAACCTGAGATT +
Preference number: 2 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLSLLLT*APQPEI
Trigger: AATCTCAGGTTGGGGAGCTCATGTTAGTAGCAGTGA...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR CCA 72 bp AGGTCTGAGGCAGACACAGAAGACAGATGGCGGCACTaGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: RSEADTEDRWRH*RKQLFPRTGSK
Trigger: CTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTGTCTGCCTCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR CCA 72 bp GGACTCCGACTTCGAGACATCGTGTTTAAACCAATTTaGCTACGGGGGCAAATGGGACTTAAACTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: GLRLRDIVFKPI*LRGQMGLKLLL
Trigger: AAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
3UTR TCA 72 bp TCAGGTGCTGGTTCTGGCACTAAGCTTATGCAAAACTaGGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTA +
Preference number: 3 (lower is better)
Translates to: SGAGSGTKLMQN*AEANSVSLSKV
Trigger: TACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTTGCATAAGCTTAGTGCCAGAACCAGCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR GCA 72 bp GAAAAGCATCAGGTGCTGGTTCTGGCACTAAGCTTATaGAAAACTGAGCTGAGGCCAATTCAGTGTCTCTCT +
Preference number: 3 (lower is better)
Translates to: EKHQVLVLALSL*KTELRPIQCLS
Trigger: AGAGAGACACTGAATTGGCCTCAGCTCAGTTTTGCATAAGCTTAGTGCCAGAACCAGCACCTGATGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR TCA 72 bp TCTTCTACACTTAGCCTTAAGTCACTGCTACTAACATaGGCTCCCCAACCTGAGATTAGGGCTGTCTTCCAA +
Preference number: 3 (lower is better)
Translates to: SSTLSLKSLLLT*APQPEIRAVFQ
Trigger: TTGGAAGACAGCCCTAATCTCAGGTTGGGGAGCTCATGTTAGTAGCAGTGACTTAAGGCTAAGTGTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR TCA 72 bp CAGCAAGTGGCCAGGCAGGGTAGAAAGCAAATAAACTaGGCTACCTGTGCCTTTTTCCAAATCAGTATATGT +
Preference number: 3 (lower is better)
Translates to: QQVARQGRKQIN*ATCAFFQISIC
Trigger: ACATATACTGATTTGGAAAAAGGCACAGGTAGCTCAGTTTATTTGCTTTCTACCCTGCCTGGCCACTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR TCA 72 bp CAAGAATTGCCCACCACTTCAGAAAGTCACATCCAATaGCAACACCGTGATTTTCTGTTGCCAATACACACA +
Preference number: 3 (lower is better)
Translates to: QELPTTSESHIQ*QHRDFLLPIHT
Trigger: TGTGTGTATTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGGGCAATTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR CCA 72 bp AGTAGCTTTGACATTCATTGGTCAACTAAACCAAACTaGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCA +
Preference number: 3 (lower is better)
Translates to: SSFDIHWSTKPN*ALSKSERKSKP
Trigger: TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
3UTR CCA 72 bp GCTGATTTATTTCCTCCTCTGCAGCCAAAAGGGATATaGCCGATCTGTTCTTGCTTTCTTCAAGATTCTTTT +
Preference number: 3 (lower is better)
Translates to: ADLFPPLQPKGI*PICSCFLQDSF
Trigger: AAAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508915.5
3UTR CCA 72 bp TTGCCAATACACACATTGATTTTCATTTGTAGCTGGTaGCTCTACATGCAGGTTCAGCCATCTAATGACTTA +
Preference number: 3 (lower is better)
Translates to: LPIHTLIFICSW*LYMQVQPSNDL
Trigger: TAAGTCATTAGATGGCTGAACCTGCATGTAGAGCCACCAGCTACAAATGAAAATCAATGTGTGTATTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR TCA 72 bp CACCACTTCAGAAAGTCACATCCAATGACAACACCGTaGTTTTCTGTTGCCAATACACACATTGATTTTCAT +
Preference number: 3 (lower is better)
Translates to: HHFRKSHPMTTP*FSVANTHIDFH
Trigger: ATGAAAATCAATGTGTGTATTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
3UTR CCA 72 bp AGGAAATTCTCTCAACTAAGTAGCTTTGACATTCATTaGTCAACTAAACCAAACTGGGCACTCTCAAAATCA +
Preference number: 3 (lower is better)
Translates to: RKFSQLSSFDIH*STKPNWALSKS
Trigger: TGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGCTACTTAGTTGAGAGAATTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp CACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCCTGCGCGATGGAGACTTaGGGGGACCAGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HASAPPSSKALTAYSLSSCAMET*GDQAVA
Trigger: GGCCACCGCCTGGTCCCCCCAAGTCTCCATCGCGCA...GGAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGCTCTCGGCCCCACGCTaGGCGATGGAGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TAHASAPPSSKALTAYSLLSAPR*AMETWG
Trigger: CCCCCAAGTCTCCATCGCGCAGCGTGGGGCCGAGAG...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCGGCTGCAGCTACGGCTaGGAGGGGCAGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVGCSYG*EGQGWE
Trigger: CTCCCAGCCCTGCCCCTCGCAGCCGTAGCTGCAGCC...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCACCCTCGGGTCGGACCTaGCCGGGTTCGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSPSGRT*PGSGSQ
Trigger: CTGGCTTCCCGAACCCGGCCAGGTCCGACCCGAGGG...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGGCCTCCGCAGGACCGTaGGGTGATATGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSRFRSSKLQGSDRLFSEASAGP*GDMAGR
Trigger: CCTTCCCGCCATATCACCCCACGGTCCTGCGGAGGC...CTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR TCA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGCGCAGGACCGTGGGGTaGTATGGCGGGAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: TAHASAPPSSKALTAYSLRRTVG*YGGKGV
Trigger: AACACCCTTCCCGCCATATCACCCCACGGTCCTGCG...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCACTCTCGGCCCCACGCTaGGCGATGGAGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSLSAPR*AMETWG
Trigger: CCCCCAAGTCTCCATCGCGCAGCGTGGGGCCGAGAG...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCGGCTGGCAGATCTGCTaGGGCTGCAGCTACGGCTGC +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVGWQIC*GCSYGC
Trigger: GCAGCCGTAGCTGCAGCCGCAGCAGATCTGCCAGCC...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAGGCTGGCAGATCTGCTaGGGCTGCAGCTACGGCTGC +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSGWQIC*GCSYGC
Trigger: GCAGCCGTAGCTGCAGCCGCAGCAGATCTGCCAGCC...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCAAGGGTGTTCTCTTCTaGGGGGCTCAGAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: SRFRSSKLQGSDRLFSELKGVLF*GAQSAA
Trigger: TGCCGCGCTCTGAGCCCCCCAGAAGAGAACACCCTT...GAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTGCCTCCGCAGGACCGTaGGGTGATATGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGAASAGP*GDMAGR
Trigger: CCTTCCCGCCATATCACCCCACGGTCCTGCGGAGGC...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAAGGGTGTTCTCTTCTaGGGGGCTCAGAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSKGVLF*GAQSAA
Trigger: TGCCGCGCTCTGAGCCCCCCAGAAGAGAACACCCTT...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCCTCCTTCTTGGGCTaGTGCTGTGAGGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: AHASAPPSSKALTAYSLSSSFLG*CCEDPK
Trigger: TTTGGGATCCTCACAGCAGCAGCCCAAGAAGGAGGA...GCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCACAAGAGGGCAGCCTTaGGCGCCACATTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVTRGQP*APHWTA
Trigger: AGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGT...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTTCTCAGCCTTGTCGATaGAGCGCCGCAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGASQPCR*SAAAGT
Trigger: AGTGCCTGCTGCGGCGCTGCATCGACAAGGCTGAGA...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp CACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGACCGTGGGGTGATATaGCGGGAAGGGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HCSRFRSSKLQGSDRLFSDRGVI*REGCSL
Trigger: AAGAGAACACCCTTCCCGCCATATCACCCCACGGTC...AGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CCA 90 bp CACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCCTTACGTCCTCCTTCTTaGGCTGCTGCTGTGAGGATC +
Preference number: 4 (lower is better)
Translates to: HASAPPSSKALTAYSLSSLRPPS*AAAVRI
Trigger: GATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAA...GGAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCCAGCTTGGAGCGGTTTaGGGACGGTCTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSQLGAV*GRSPDL
Trigger: AAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTG...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCCTCTGATCTGCTTGGGCTGCTGCTGTaGGGATCCCAAAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: APPSSKALTAYSLSSSDLLGLLL*GSQRVV
Trigger: GACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAG...CAGATCAGAGGAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR TCA 90 bp CACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCCCCAAGGCAAAAGGCGTaGCTTGATTGTTTCCACACC +
Preference number: 4 (lower is better)
Translates to: HASAPPSSKALTAYSLSSPRQKA*LDCFHT
Trigger: GGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGG...GGAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR TCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTGGGAATAGGAATCGCTaGACCGGGACAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGAGNRNR*TGTRGQ
Trigger: CTGCCCTCTTGTCCCGGTTCAGCGATTCCTATTCCC...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCCTGTGGCGATGTAGATaGTCCGCTGAACGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVLWRCR*SAERSQ
Trigger: CTGAGACCGTTCAGCGGATCATCTACATCGCCACAG...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCGGACTAAGGGAGCAGTaGAATCCGAGTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVGLREQ*NPSRSC
Trigger: GCAGCTACGACTCGGATTTCACTGCTCCCTTAGTCC...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGTCCTTCTTGGGCTGCTaGTGTGAGGATCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TAHASAPPSSKALTAYSLSFLGC*CEDPKE
Trigger: CTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGA...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CCA 90 bp GATTTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTGCTTTTCCCGCGCGGTCTCCTaGCTCCCCAGCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: DLFPPLQPKGIWPICSCFSRAVS*LPSSRL
Trigger: CAGGCGGCTGCTGGGGAGCCAGGAGACCGCGCGGGA...AAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCCCCGATCCCGAGGACTaGGATCTTTATGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSPDPED*DLYVSP
Trigger: GGGAGAGACATAAAGATCCCAGTCCTCGGGATCGGG...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACTGCGAGGGGCAGGGCTaGGAGACCGGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNCEGQG*ETGSWR
Trigger: CCTCCAGGAGCCGGTCTCCCAGCCCTGCCCCTCGCA...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCACCTTGCGCGCCACATTaGACAGCTTGGAGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSPCAPH*TAWSGL
Trigger: CAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGG...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTCCTTGCGCGCCACATTaGACAGCTTGGAGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGAPCAPH*TAWSGL
Trigger: CAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGG...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCACTTGGGCTGCTGCTGTaGGGATCCCAAAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSLGLLL*GSQRVV
Trigger: GACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAG...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCCACAGTCATTCTCCATaGGAGCAGGCCACACGTGAT +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSHSHSP*EQATRD
Trigger: ATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTG...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACCTCTCGGCCCCACGCTaGGCGATGGAGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNLSAPR*AMETWG
Trigger: CCCCCAAGTCTCCATCGCGCAGCGTGGGGCCGAGAG...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp CTGCTTTTTCAGCTGATTTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGACTCTCGGCCCCACGCTaGGCGATGGAGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLFQLIYFLLCSQKGYGRLSAPR*AMETWG
Trigger: CCCCCAAGTCTCCATCGCGCAGCGTGGGGCCGAGAG...TCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATCAGCTGAAAAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR GCA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGCCAAAGAGTTGTCCCTaGACCTTGGCAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TAHASAPPSSKALTAYSLPKSCP*TLATCS
Trigger: TGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGG...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCTCCTCCTTCTTGGGCTaGTGCTGTGAGGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSSSFLG*CCEDPK
Trigger: TTTGGGATCCTCACAGCAGCAGCCCAAGAAGGAGGA...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCCTATCAAACGTGTCCTaGAGAGAGGGGACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVLSNVS*REGTLL
Trigger: CAGCAAGGTCCCCTCTCTGCAGGACACGTTTGATAG...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCATTGAGTGAGTTCCACTaGTCACGCTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSLSEFH*SRFRSS
Trigger: GGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAA...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCCCAAAGAGTTGTCCCTaGACCTTGGCAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVPKSCP*TLATCS
Trigger: TGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGG...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTTCCTTCTTGGGCTGCTaGTGTGAGGATCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGASFLGC*CEDPKE
Trigger: CTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGA...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCGCAGAGAGGGGACCTTaGTGTCAACAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVAERGP*CQQIFP
Trigger: TGGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGC...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCATGGCTTCTGTGTCCTaGTGGTCTGCATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSMASVS*WSAFCL
Trigger: CAAGCAGAATGCAGACCAGCAGGACACAGAAGCCAT...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTAGGCTGCAGCTACGGCTaGGAGGGGCAGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVGCSYG*EGQGWE
Trigger: CTCCCAGCCCTGCCCCTCGCAGCCGTAGCTGCAGCC...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp TGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACCAGATCTGCTGCGGCTaGAGCTACGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: CLNQFGYGGKWDLNSCFDQICCG*SYGCEG
Trigger: CCCCTCGCAGCCGTAGCTGCAGCCGCAGCAGATCTG...GTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp AATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGGGCTGGCAGATCTGCTaGGGCTGCAGCTACGGCTGC +
Preference number: 4 (lower is better)
Translates to: NLGNPHLIGEGLRLRDIVGWQIC*GCSYGC
Trigger: GCAGCCGTAGCTGCAGCCGCAGCAGATCTGCCAGCC...CACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAATTGACGTGGACGGGTTaGCTGCCAGGGACGCGCGCG +
Preference number: 4 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQLTWTG*LPGTRA
Trigger: CGCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAA...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACTCCCGCGCGGTCTCCTaGCTCCCCAGCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNSRAVS*LPSSRL
Trigger: CAGGCGGCTGCTGGGGAGCCAGGAGACCGCGCGGGA...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTGCCTCCGCAGGACCGTaGGGTGATATGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ILAIHILLEKDSDFETSCASAGP*GDMAGR
Trigger: CCTTCCCGCCATATCACCCCACGGTCCTGCGGAGGC...ACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp GATTTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTGCTTTTGCGCGATGGAGACTTaGGGGGACCAGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DLFPPLQPKGIWPICSCFCAMET*GDQAVA
Trigger: GGCCACCGCCTGGTCCCCCCAAGTCTCCATCGCGCA...AAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCATTACGTCCTCCTTCTTaGGCTGCTGCTGTGAGGATC +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSLRPPS*AAAVRI
Trigger: GATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAA...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAGACAGATGGCGGCACTaGAGAAAGCAGCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSDRWRH*RKQLFP
Trigger: TGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTC...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCGCAAAAGGCGTGACTTaGTTGTTTCCACACCATCAT +
Preference number: 4 (lower is better)
Translates to: SRFRSSKLQGSDRLFSELAKGVT*LFPHHH
Trigger: ATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGC...GAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR TCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCTCACTGCTACTAACATaGGCTCCCCAACCTGAGATT +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSSLLLT*APQPEI
Trigger: AATCTCAGGTTGGGGAGCTCATGTTAGTAGCAGTGA...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGTGCACCTTGGCAACTTaGTCAATGAGTTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: CSRFRSSKLQGSDRLFSECTLAT*SMSSRQ
Trigger: TTGCCTTGAACTCATTGAGCAAGTTGCCAAGGTGCA...CTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTGCAGAGAGGGGACCTTaGTGTCAACAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGAAERGP*CQQIFP
Trigger: TGGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGC...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp CTGAGCTCCTCTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTTGAAGAGGCAGAGAGGGGACCTTaGTGTCAACAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSSSDLCFCGGHPPELEEAERGP*CQQIFP
Trigger: TGGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGC...CTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAGAGGAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp TTAAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATGGCTGCAGCTACGGCTaGGAGGGGCAGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LKSWQSTSYWRRTPTSRHGCSYG*EGQGWE
Trigger: CTCCCAGCCCTGCCCCTCGCAGCCGTAGCTGCAGCC...ATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCACAGATCTGCTGCGGCTaGAGCTACGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPQICCG*SYGCEG
Trigger: CCCCTCGCAGCCGTAGCTGCAGCCGCAGCAGATCTG...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp AAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGATCTCAGCCTTGTCGATaGAGCGCCGCAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KPIWLRGQMGLKLLLRQRSQPCR*SAAAGT
Trigger: AGTGCCTGCTGCGGCGCTGCATCGACAAGGCTGAGA...TCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAATCCGAGTCGTAGCTaGGGCGGTATTTGCAATCAT +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSNPSRS*GGICNH
Trigger: ATGATTGCAAATACCGCCGCAGCTACGACTCGGATT...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCCTGGCACTAAGCTTATaGAAAACTGAGCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVLALSL*KTELRP
Trigger: TGGCCTCAGCTCAGTTTTGCATAAGCTTAGTGCCAG...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp TTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTGCTTTCTTGCCTCCGCAGGACCGTaGGGTGATATGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LFPPLQPKGIWPICSCFLASAGP*GDMAGR
Trigger: CCTTCCCGCCATATCACCCCACGGTCCTGCGGAGGC...AAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTATGCGCGATGGAGACTTaGGGGGACCAGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVCAMET*GDQAVA
Trigger: GGCCACCGCCTGGTCCCCCCAAGTCTCCATCGCGCA...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp CATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTTGGTGCGCGATGGAGACTTaGGGGGACCAGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HLIGEGLRLRDIVFKPIWCAMET*GDQAVA
Trigger: GGCCACCGCCTGGTCCCCCCAAGTCTCCATCGCGCA...CCAAATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTCTGGAGGACCTTCCTTaGAGTGCACTTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGALEDLP*SALFSA
Trigger: TGCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAG...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACTGCGAGGGGCAGGGCTaGGAGACCGGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNCEGQG*ETGSWR
Trigger: CCTCCAGGAGCCGGTCTCCCAGCCCTGCCCCTCGCA...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAACAGCGGTGGAGGGGCTaGCAGATCTGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: IHILLEKDSDFETSCLNQQRWRG*QICCGC
Trigger: GCAGCCGCAGCAGATCTGCCAGCCCCTCCACCGCTG...TTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCACGCAGGACCGTGGGGTaGTATGGCGGGAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPRRTVG*YGGKGV
Trigger: AACACCCTTCCCGCCATATCACCCCACGGTCCTGCG...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGTGGCAACTTGCTCAATaGGTTCAAGGCAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: TAHASAPPSSKALTAYSLWQLAQ*VQGNGL
Trigger: TAAACCATTGCCTTGAACTCATTGAGCAAGTTGCCA...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR TCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTATCTTAAGTGAGGTCTaGGGCAGACACAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGAILSEV*GRHRRQ
Trigger: CTGTCTTCTGTGTCTGCCTCAGACCTCACTTAAGAT...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTTCACTGCTACTAACATaGGCTCCCCAACCTGAGATT +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGASLLLT*APQPEI
Trigger: AATCTCAGGTTGGGGAGCTCATGTTAGTAGCAGTGA...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCTGCACCTTGGCAACTTaGTCAATGAGTTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVCTLAT*SMSSRQ
Trigger: TTGCCTTGAACTCATTGAGCAAGTTGCCAAGGTGCA...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAGGTGGTTCTAAGGCCTaGATTGCAAAGGCAATGCAA +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSGGSKA*IAKAMQ
Trigger: TTGCATTGCCTTTGCAATGCAGGCCTTAGAACCACC...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTAAGGGTGTTCTCTTCTaGGGGGCTCAGAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: ILAIHILLEKDSDFETSCKGVLF*GAQSAA
Trigger: TGCCGCGCTCTGAGCCCCCCAGAAGAGAACACCCTT...ACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCTCTTATAATCGGACATaGCTTCTGTGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSSYNRT*LLCPAG
Trigger: ACCAGCAGGACACAGAAGCCATGTCCGATTATAAGA...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACTGGGAGACCGGCTCCTaGAGGACCTTCCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNWETGS*RTFLGV
Trigger: CACTCCAAGGAAGGTCCTCCAGGAGCCGGTCTCCCA...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACCAGCGGTGGAGGGGCTaGCAGATCTGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNQRWRG*QICCGC
Trigger: GCAGCCGCAGCAGATCTGCCAGCCCCTCCACCGCTG...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCCGACCCCACATAAGATaGTGTCAACGATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSRPHIR*CQRFSH
Trigger: GTGAGAAAATCGTTGACACCATCTTATGTGGGGTCG...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCGTGTTTAAACCAATTTaGCTACGGGGGCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVVFKPI*LRGQMG
Trigger: TCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCCAATCCACATCTTATTaGAGAAGGACTCCGACTTCG +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVQSTSY*RRTPTS
Trigger: CGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTG...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTACGCAGGACCGTGGGGTaGTATGGCGGGAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVRRTVG*YGGKGV
Trigger: AACACCCTTCCCGCCATATCACCCCACGGTCCTGCG...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCTGGCAACTTGCTCAATaGGTTCAAGGCAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVWQLAQ*VQGNGL
Trigger: TAAACCATTGCCTTGAACTCATTGAGCAAGTTGCCA...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGGGAATAGGAATCGCTaGACCGGGACAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNGNRNR*TGTRGQ
Trigger: CTGCCCTCTTGTCCCGGTTCAGCGATTCCTATTCCC...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAACTCTCTGTGTGGGGTaGTACACAGAATTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSTLCVG*YTELPF
Trigger: AAAAGGCAATTCTGTGTATCACCCCACACAGAGAGT...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: TAHASAPPSSKALTAYSLKSSFS*NVRKVS
Trigger: CGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTT...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR GCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTTGCACCTTGGCAACTTaGTCAATGAGTTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGACTLAT*SMSSRQ
Trigger: TTGCCTTGAACTCATTGAGCAAGTTGCCAAGGTGCA...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTTTAGAGTCTAACTGTTaGATATCCCGATCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGALESNC*ISRSRG
Trigger: TCCTCGGGATCGGGATATGCAACAGTTAGACTCTAA...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGAACAAGAGGGCAGCCTTaGGCGCCACATTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: VFKPIWLRGQMGLKLLLRTRGQP*APHWTA
Trigger: AGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGT...TCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAATCTCAGCCTTGTCGATaGAGCGCCGCAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQSQPCR*SAAAGT
Trigger: AGTGCCTGCTGCGGCGCTGCATCGACAAGGCTGAGA...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCATGGGACTTAAACTCCTaGTTCGACAACGACTTACAG +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSWDLNS*FDNDLQ
Trigger: CTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCA...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACCAGCTTGGAGCGGTTTaGGGACGGTCTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNQLGAV*GRSPDL
Trigger: AAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTG...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACCCTTGCGCGCCACATTaGACAGCTTGGAGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNPCAPH*TAWSGL
Trigger: CAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGG...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TTAAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGCAGGACCGTGGGGTaGTATGGCGGGAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LKSWQSTSYWRRTPTSRHRRTVG*YGGKGV
Trigger: AACACCCTTCCCGCCATATCACCCCACGGTCCTGCG...ATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAGGGAATAGGAATCGCTaGACCGGGACAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPGNRNR*TGTRGQ
Trigger: CTGCCCTCTTGTCCCGGTTCAGCGATTCCTATTCCC...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTGTGGCGATGTAGATaGTCCGCTGAACGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DIVFKPIWLRGQMGLKLLLWRCR*SAERSQ
Trigger: CTGAGACCGTTCAGCGGATCATCTACATCGCCACAG...CAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCACTCGGATCACATCATTaGCACTGCTTTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSLGSHH*HCFENH
Trigger: ATGATTCTCAAAGCAGTGTCAATGATGTGATCCGAG...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp AATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGGGACTAAGGGAGCAGTaGAATCCGAGTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: NLGNPHLIGEGLRLRDIVGLREQ*NPSRSC
Trigger: GCAGCTACGACTCGGATTTCACTGCTCCCTTAGTCC...CACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp AAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGACTATCAAACGTGTCCTaGAGAGAGGGGACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KPIWLRGQMGLKLLLRQRLSNVS*REGTLL
Trigger: CAGCAAGGTCCCCTCTCTGCAGGACACGTTTGATAG...TCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAGAAGTGAAGTAACTTaGTCAGTGCCACAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSRSEVT*SVPQSK
Trigger: CTTGCTTTGTGGCACTGAGCAAGTTACTTCACTTCT...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp TTGCTCAGTGCCACAAAGCAAGCTGATGACCAAGTCATGACTAGCAGTTACCTAAAACAAACCTTGACGTaGACGGGTTGGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLSATKQADDQVMTSSYLKQTLT*TGWLPG
Trigger: CCCTGGCAGCCAACCCGTCCACGTCAAGGTTTGTTT...TAGGTAACTGCTAGTCATGACTTGGTCATCAGCTTGCTTTGTGGCACTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTATGGGAGACCGGCTCCTaGAGGACCTTCCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVWETGS*RTFLGV
Trigger: CACTCCAAGGAAGGTCCTCCAGGAGCCGGTCTCCCA...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTGCGAGGGGCAGGGCTaGGAGACCGGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCCEGQG*ETGSWR
Trigger: CCTCCAGGAGCCGGTCTCCCAGCCCTGCCCCTCGCA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAACCACATTGGACAGCTTaGAGCGGTTTGGGGACGGTC +
Preference number: 4 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQPHWTA*SGLGTV
Trigger: GACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGG...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCACCACATTGGACAGCTTaGAGCGGTTTGGGGACGGTC +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPPHWTA*SGLGTV
Trigger: GACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGG...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTACCACATTGGACAGCTTaGAGCGGTTTGGGGACGGTC +
Preference number: 4 (lower is better)
Translates to: LAIHILLEKDSDFETSCLPHWTA*SGLGTV
Trigger: GACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGG...TAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTATGCAACATATCTCCTaGATGAAGTCACTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGAMQHIS*MKSLRR
Trigger: CCTTCTCAGTGACTTCATCCAGGAGATATGTTGCAT...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCCAATGGTTTAGATTTTaGTCACACGTGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSQWFRF*SHVFVL
Trigger: CAACACAAACACGTGTGATCAAAATCTAAACCATTG...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCCTCTGATCTGCAATGGTTTAGATTTTaGTCACACGTGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: APPSSKALTAYSLSSSDLQWFRF*SHVFVL
Trigger: CAACACAAACACGTGTGATCAAAATCTAAACCATTG...CAGATCAGAGGAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR TCA 90 bp GCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCTTGGGCTGCTGCTGTaGGGATCCCAAAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: AIHILLEKDSDFETSCLNLGLLL*GSQRVV
Trigger: GACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAG...GTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TTGCTCAGTGCCACAAAGCAAGCTGATGACCAAGTCATGACTAGCAGTTACCTAGGTCTGCATTCTGCTTaGGTGAGTTCCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LLSATKQADDQVMTSSYLGLHSA*VSSTAH
Trigger: GTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACC...TAGGTAACTGCTAGTCATGACTTGGTCATCAGCTTGCTTTGTGGCACTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGGTCTGCATTCTGCTTaGGTGAGTTCCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNGLHSA*VSSTAH
Trigger: GTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACC...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGACTCTCGGCCCCACGCTaGGCGATGGAGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGLSAPR*AMETWG
Trigger: CCCCCAAGTCTCCATCGCGCAGCGTGGGGCCGAGAG...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACTTGAGTGAGTTCCACTaGTCACGCTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AIHILLEKDSDFETSCLNLSEFH*SRFRSS
Trigger: GGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAA...GTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCCTTGAAGTGTCTGAATaGCATTTTTGCTACATGGAA +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSLEVSE*HFCYME
Trigger: TTCCATGTAGCAAAAATGGCATTCAGACACTTCAAG...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTAAGGGTGTTCTCTTCTaGGGGGCTCAGAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSKGVLF*GAQSAA
Trigger: TGCCGCGCTCTGAGCCCCCCAGAAGAGAACACCCTT...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp AGCCAAAAGGGATATGGCCGATCTGTTCTTGCTTTCTTCAAGATTCTTTTCAGTAAGGGTGTTCTCTTCTaGGGGGCTCAGAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: SQKGYGRSVLAFFKILFSKGVLF*GAQSAA
Trigger: TGCCGCGCTCTGAGCCCCCCAGAAGAGAACACCCTT...ACTGAAAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAGACCGTGGGGTGATATaGCGGGAAGGGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPDRGVI*REGCSL
Trigger: AAGAGAACACCCTTCCCGCCATATCACCCCACGGTC...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp AAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGACCGTGGGGTGATATaGCGGGAAGGGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KSWQSTSYWRRTPTSRHRDRGVI*REGCSL
Trigger: AAGAGAACACCCTTCCCGCCATATCACCCCACGGTC...ACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp AAGCTGCTTTTTCAGCTGATTTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCGACCGTGGGGTGATATaGCGGGAAGGGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLLFQLIYFLLCSQKGYGDRGVI*REGCSL
Trigger: AAGAGAACACCCTTCCCGCCATATCACCCCACGGTC...GCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATCAGCTGAAAAAGCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTGCGCGATGGAGACTTaGGGGGACCAGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCCAMET*GDQAVA
Trigger: GGCCACCGCCTGGTCCCCCCAAGTCTCCATCGCGCA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp AAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGCCCGATCCCGAGGACTaGGATCTTTATGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KILAIHILLEKDSDFETSPDPED*DLYVSP
Trigger: GGGAGAGACATAAAGATCCCAGTCCTCGGGATCGGG...CGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTCAGCGGTGGAGGGGCTaGCAGATCTGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCQRWRG*QICCGC
Trigger: GCAGCCGCAGCAGATCTGCCAGCCCCTCCACCGCTG...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTGGCTACGGGGGCAAATaGGACTTAAACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ILAIHILLEKDSDFETSCGYGGK*DLNSCF
Trigger: GAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCC...ACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCTCAACTAAACCAAACTaGGCACTCTCAAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVSTKPN*ALSKSE
Trigger: TTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGA...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp AAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTCACAGTCATTCTCCATaGGAGCAGGCCACACGTGAT +
Preference number: 4 (lower is better)
Translates to: KSWQSTSYWRRTPTSRHRHSHSP*EQATRD
Trigger: ATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTG...ACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCATTGAGATGGAAATCTTaGACCTTTGTAACGGACTTT +
Preference number: 4 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSLRWKS*TFVTDF
Trigger: AAAGTCCGTTACAAAGGTTCAAGATTTCCATCTCAA...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGCAGAGAGGGGACCTTaGTGTCAACAGATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNAERGP*CQQIFP
Trigger: TGGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGC...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTCAGATCTGCTGCGGCTaGAGCTACGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCQICCG*SYGCEG
Trigger: CCCCTCGCAGCCGTAGCTGCAGCCGCAGCAGATCTG...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTACAAGAGGGCAGCCTTaGGCGCCACATTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSTRGQP*APHWTA
Trigger: AGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGT...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGAGCCTCCGCAGGACCGTaGGGTGATATGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGASAGP*GDMAGR
Trigger: CCTTCCCGCCATATCACCCCACGGTCCTGCGGAGGC...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp AAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTTTACGTCCTCCTTCTTaGGCTGCTGCTGTGAGGATC +
Preference number: 4 (lower is better)
Translates to: KSWQSTSYWRRTPTSRHRLRPPS*AAAVRI
Trigger: GATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAA...ACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAGGCTACGGGGGCAAATaGGACTTAAACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPGYGGK*DLNSCF
Trigger: GAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCC...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTAGCTGTTTCCACGCACTaGGTCAAAGGAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVAVSTH*VKGAGL
Trigger: CAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGC...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAGACACAGAAGACAGATaGCGGCACTGGAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPDTEDR*RHWRKQ
Trigger: CTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTGTC...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTAGCTTTGACATTCATTaGTCAACTAAACCAAACTGG +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGASFDIH*STKPNW
Trigger: CCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGCT...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCCATTTATCTCAAAGCTaGCTTCTAATCAAATCACTG +
Preference number: 4 (lower is better)
Translates to: TDGGTGESSCFHALGQRSHLSQS*LLIKSL
Trigger: CAGTGATTTGATTAGAAGCCAGCTTTGAGATAAATG...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTCTTGGGCTGCTGCTGTaGGGATCCCAAAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSLGLLL*GSQRVV
Trigger: GACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAG...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGACTAAGGGAGCAGTaGAATCCGAGTCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNGLREQ*NPSRSC
Trigger: GCAGCTACGACTCGGATTTCACTGCTCCCTTAGTCC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTACACAGTCATTCTCCATaGGAGCAGGCCACACGTGAT +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVHSHSP*EQATRD
Trigger: ATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTG...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp TTGCTCAGTGCCACAAAGCAAGCTGATGACCAAGTCATGACTAGCAGTTACCTAATCTTAAGTGAGGTCTaGGGCAGACACAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: LLSATKQADDQVMTSSYLILSEV*GRHRRQ
Trigger: CTGTCTTCTGTGTCTGCCTCAGACCTCACTTAAGAT...TAGGTAACTGCTAGTCATGACTTGGTCATCAGCTTGCTTTGTGGCACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp AGCTCCTCTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTTGAAGAGATTAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: SSSDLCFCGGHPPELEEIKSSFS*NVRKVS
Trigger: CGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTT...AATCTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAGAGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR GCA 90 bp GCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCCAAAGAGTTGTCCCTaGACCTTGGCAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AIHILLEKDSDFETSCLNPKSCP*TLATCS
Trigger: TGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGG...GTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTATCCTCCTTCTTGGGCTaGTGCTGTGAGGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVSSFLG*CCEDPK
Trigger: TTTGGGATCCTCACAGCAGCAGCCCAAGAAGGAGGA...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCACGTCTTGAACCTGGTTaGATTGACTCCGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPRLEPG*IDSGLS
Trigger: ACTCAACCCGGAGTCAATGCAACCAGGTTCAAGACG...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp AAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGCGTCTTGAACCTGGTTaGATTGACTCCGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: KILAIHILLEKDSDFETSRLEPG*IDSGLS
Trigger: ACTCAACCCGGAGTCAATGCAACCAGGTTCAAGACG...CGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp GACTTCGAGACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAATCCGAGTCGTAGCTaGGGCGGTATTTGCAATCAT +
Preference number: 4 (lower is better)
Translates to: DFETSCLNQFGYGGKWDLNPSRS*GGICNH
Trigger: ATGATTGCAAATACCGCCGCAGCTACGACTCGGATT...TAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTCTCGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGACCGTGGGGTGATATaGCGGGAAGGGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNDRGVI*REGCSL
Trigger: AAGAGAACACCCTTCCCGCCATATCACCCCACGGTC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTGCTTTCTTCAAGCAGCCAAAAGGGATATaGCCGATCTGTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FLLCSQKGYGRSVLAFFKQPKGI*PICSCF
Trigger: AAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTG...CTTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CCA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAACTGGAGGACCTTCCTTaGAGTGCACTTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQLEDLP*SALFSA
Trigger: TGCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAG...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAAGCCATTTTTGCTACATaGAATGCCTCCACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQAIFAT*NASTVA
Trigger: CGCCACAGTGGAGGCATTCCATGTAGCAAAAATGGC...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTAACGATTTTCTCACATaGATCTTGAAGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TGESSCFHALGQRSRSGANDFLT*ILKCLN
Trigger: ATTCAGACACTTCAAGATCCATGTGAGAAAATCGTT...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp CCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTCCAAGGCAAAAGGCGTaGCTTGATTGTTTCCACACC +
Preference number: 4 (lower is better)
Translates to: PHLIGEGLRLRDIVFKPIPRQKA*LDCFHT
Trigger: GGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGG...AATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp CCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTTGCATTCTGCTTGAGTaGGTTCCACTGCTCACGCTT +
Preference number: 4 (lower is better)
Translates to: PHLIGEGLRLRDIVFKPICILLE*VPLLTL
Trigger: AAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCA...AATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGGTCTGCATTCTGCTTaGGTGAGTTCCACTGCTCAC +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSGLHSA*VSSTAH
Trigger: GTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGATGCACCTTGGCAACTTaGTCAATGAGTTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VFKPIWLRGQMGLKLLLRCTLAT*SMSSRQ
Trigger: TTGCCTTGAACTCATTGAGCAAGTTGCCAAGGTGCA...TCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp TTAAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATTCCTTCTTGGGCTGCTaGTGTGAGGATCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LKSWQSTSYWRRTPTSRHSFLGC*CEDPKE
Trigger: CTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGA...ATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp TTAAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATTCCTCCTTCTTGGGCTaGTGCTGTGAGGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: LKSWQSTSYWRRTPTSRHSSFLG*CCEDPK
Trigger: TTTGGGATCCTCACAGCAGCAGCCCAAGAAGGAGGA...ATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp ATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAAATGGCTTCTGTGTCCTaGTGGTCTGCATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IHILLEKDSDFETSCLNQMASVS*WSAFCL
Trigger: CAAGCAGAATGCAGACCAGCAGGACACAGAAGCCAT...TTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp GCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACGGTGGTTCTAAGGCCTaGATTGCAAAGGCAATGCAA +
Preference number: 4 (lower is better)
Translates to: AIHILLEKDSDFETSCLNGGSKA*IAKAMQ
Trigger: TTGCATTGCCTTTGCAATGCAGGCCTTAGAACCACC...GTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp GTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGATCTTATAATCGGACATaGCTTCTGTGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VFKPIWLRGQMGLKLLLRSYNRT*LLCPAG
Trigger: ACCAGCAGGACACAGAAGCCATGTCCGATTATAAGA...TCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp AATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCACTGGAGGACCTTCCTTaGAGTGCACTTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NPHLIGEGLRLRDIVFKPLEDLP*SALFSA
Trigger: TGCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAG...TGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGATGGGAGACCGGCTCCTaGAGGACCTTCCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGWETGS*RTFLGV
Trigger: CACTCCAAGGAAGGTCCTCCAGGAGCCGGTCTCCCA...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp ATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTCGACCCCACATAAGATaGTGTCAACGATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ILAIHILLEKDSDFETSCRPHIR*CQRFSH
Trigger: GTGAGAAAATCGTTGACACCATCTTATGTGGGGTCG...ACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp AAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGAATGCAACATATCTCCTaGATGAAGTCACTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KPIWLRGQMGLKLLLRQRMQHIS*MKSLRR
Trigger: CCTTCTCAGTGACTTCATCCAGGAGATATGTTGCAT...TCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGACACAGAAGACAGATaGCGGCACTGGAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSDTEDR*RHWRKQ
Trigger: CTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTGTC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTCCAAGGCAAAAGGCGTaGCTTGATTGTTTCCACACC +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSPRQKA*LDCFHT
Trigger: GGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGG...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TTGCTCAGTGCCACAAAGCAAGCTGATGACCAAGTCATGACTAGCAGTTACCTAATGAAATCTTGGGATTaGCATTCATGGCTCGGATCA +
Preference number: 4 (lower is better)
Translates to: LLSATKQADDQVMTSSYLMKSWD*HSWLGS
Trigger: TGATCCGAGCCATGAATGTCAATCCCAAGATTTCAT...TAGGTAACTGCTAGTCATGACTTGGTCATCAGCTTGCTTTGTGGCACTGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp AATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGATGAAATCTTGGGATTaGCATTCATGGCTCGGATCA +
Preference number: 4 (lower is better)
Translates to: NLGNPHLIGEGLRLRDIVMKSWD*HSWLGS
Trigger: TGATCCGAGCCATGAATGTCAATCCCAAGATTTCAT...CACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAAAGCTTATGCAAAACTaGGCTGAGGCCAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPKLMQN*AEANSV
Trigger: CACTGAATTGGCCTCAGCTCAGTTTTGCATAAGCTT...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp TTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACATTTATTTCCTCCTCTaGAGCCAAAAGGGATATGGC +
Preference number: 4 (lower is better)
Translates to: LNQFGYGGKWDLNSCFDNIYFLL*SQKGYG
Trigger: GCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAAT...GTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp TTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTGCTTTCTTCAAATTTATTTCCTCCTCTaGAGCCAAAAGGGATATGGC +
Preference number: 4 (lower is better)
Translates to: FPPLQPKGIWPICSCFLQIYFLL*SQKGYG
Trigger: GCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAAT...TTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR GCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTATGGCTTCTGTGTCCTaGTGGTCTGCATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSMASVS*WSAFCL
Trigger: CAAGCAGAATGCAGACCAGCAGGACACAGAAGCCAT...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACTGGGACTTAAACTCCTaGTTCGACAACGACTTACAG +
Preference number: 4 (lower is better)
Translates to: AIHILLEKDSDFETSCLNWDLNS*FDNDLQ
Trigger: CTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCA...GTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTCCCGATCCCGAGGACTaGGATCTTTATGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLPDPED*DLYVSP
Trigger: GGGAGAGACATAAAGATCCCAGTCCTCGGGATCGGG...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp GGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACAGCCAAAAGGGATATaGCCGATCTGTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GNPHLIGEGLRLRDIVFKQPKGI*PICSCF
Trigger: AAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTG...TTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp TTAAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATGCCATTTTTGCTACATaGAATGCCTCCACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: LKSWQSTSYWRRTPTSRHAIFAT*NASTVA
Trigger: CGCCACAGTGGAGGCATTCCATGTAGCAAAAATGGC...ATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCACGACCCCACATAAGATaGTGTCAACGATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPRPHIR*CQRFSH
Trigger: GTGAGAAAATCGTTGACACCATCTTATGTGGGGTCG...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAGTGTTTAAACCAATTTaGCTACGGGGGCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPVFKPI*LRGQMG
Trigger: TCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp GGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAAGTGTTTAAACCAATTTaGCTACGGGGGCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: GNPHLIGEGLRLRDIVFKVFKPI*LRGQMG
Trigger: TCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC...TTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
3UTR CAA 72 bp CTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTaGAAGAGATTTAAGCTGCTTTTTCAGCTGATTTAT +
Preference number: 4 (lower is better)
Translates to: LICVSVAGILLS*KRFKLLFQLIY
Trigger: ATAAATCAGCTGAAAAAGCAGCTTAAATCTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR TCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCATGGCAACTTGCTCAATaGGTTCAAGGCAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPWQLAQ*VQGNGL
Trigger: TAAACCATTGCCTTGAACTCATTGAGCAAGTTGCCA...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp CCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTGCAAAAGGCGTGACTTaGTTGTTTCCACACCATCAT +
Preference number: 4 (lower is better)
Translates to: PHLIGEGLRLRDIVFKPIAKGVT*LFPHHH
Trigger: ATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGC...AATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGACTGTGGCGATGTAGATaGTCCGCTGAACGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGLWRCR*SAERSQ
Trigger: CTGAGACCGTTCAGCGGATCATCTACATCGCCACAG...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTACTCGGATCACATCATTaGCACTGCTTTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LAIHILLEKDSDFETSCLLGSHH*HCFENH
Trigger: ATGATTCTCAAAGCAGTGTCAATGATGTGATCCGAG...TAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp AAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGATCAAACACTTGGGATaGATTGTCACTATGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KILAIHILLEKDSDFETSIKHLG*IVTMQG
Trigger: GCCTTGCATAGTGACAATTCATCCCAAGTGTTTGAT...CGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp TGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: CLNQFGYGGKWDLNSCFDKSSFS*NVRKVS
Trigger: CGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTT...GTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp AATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCATTAGAGTCTAACTGTTaGATATCCCGATCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: NPHLIGEGLRLRDIVFKPLESNC*ISRSRG
Trigger: TCCTCGGGATCGGGATATGCAACAGTTAGACTCTAA...TGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTTGAGTGAGTTCCACTaGTCACGCTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCLSEFH*SRFRSS
Trigger: GGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACAATCCGAGTCGTAGCTaGGGCGGTATTTGCAATCAT +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNNPSRS*GGICNH
Trigger: ATGATTGCAAATACCGCCGCAGCTACGACTCGGATT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTGCTCAGTGCCACAAAGCAAGCTGATGACCAAGTCATGACTAGCAGTTACCTATCCAGCACACTGCATTaGTTCAAAGTGATGACTAAT +
Preference number: 4 (lower is better)
Translates to: LLSATKQADDQVMTSSYLSSTLH*FKVMTN
Trigger: ATTAGTCATCACTTTGAAGCAATGCAGTGTGCTGGA...TAGGTAACTGCTAGTCATGACTTGGTCATCAGCTTGCTTTGTGGCACTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTACAGCCAAAAGGGATATaGCCGATCTGTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVQPKGI*PICSCF
Trigger: AAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTG...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTGGCTACGGGGGCAAATaGGACTTAAACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLGYGGK*DLNSCF
Trigger: GAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCC...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTACAATCCACATCTTATTaGAGAAGGACTCCGACTTCG +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVQSTSY*RRTPTS
Trigger: CGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTG...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp CATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTTGGCAATCCACATCTTATTaGAGAAGGACTCCGACTTCG +
Preference number: 4 (lower is better)
Translates to: HLIGEGLRLRDIVFKPIWQSTSY*RRTPTS
Trigger: CGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTG...CCAAATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp CCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTTGGCAACTTGCTCAATaGGTTCAAGGCAATGGTTTA +
Preference number: 4 (lower is better)
Translates to: PHLIGEGLRLRDIVFKPIWQLAQ*VQGNGL
Trigger: TAAACCATTGCCTTGAACTCATTGAGCAAGTTGCCA...AATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGCAAAAGGCGTGACTTaGTTGTTTCCACACCATCAT +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSAKGVT*LFPHHH
Trigger: ATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTTGCATTCTGCTTGAGTaGGTTCCACTGCTCACGCTT +
Preference number: 4 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLCILLE*VPLLTL
Trigger: AAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCA...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp GTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGAGATCAAGATGACAAATaGCATAATCCAAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: VFKPIWLRGQMGLKLLLRDQDDK*HNPRQH
Trigger: ATGCTGTCTTGGATTATGTCATTTGTCATCTTGATC...TCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTCCTTCTTGGGCTGCTaGTGTGAGGATCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCSFLGC*CEDPKE
Trigger: CTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGACTATCAAACGTGTCCTaGAGAGAGGGGACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGLSNVS*REGTLL
Trigger: CAGCAAGGTCCCCTCTCTGCAGGACACGTTTGATAG...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTTTAGAGTCTAACTGTTaGATATCCCGATCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSLESNC*ISRSRG
Trigger: TCCTCGGGATCGGGATATGCAACAGTTAGACTCTAA...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTAATTTATTTCCTCCTCTaGAGCCAAAAGGGATATGGC +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVIYFLL*SQKGYG
Trigger: GCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAAT...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp TTGCTCAGTGCCACAAAGCAAGCTGATGACCAAGTCATGACTAGCAGTTACCTACTTGAAGTGTCTGAATaGCATTTTTGCTACATGGAA +
Preference number: 4 (lower is better)
Translates to: LLSATKQADDQVMTSSYLLEVSE*HFCYME
Trigger: TTCCATGTAGCAAAAATGGCATTCAGACACTTCAAG...TAGGTAACTGCTAGTCATGACTTGGTCATCAGCTTGCTTTGTGGCACTGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTTACGTCCTCCTTCTTaGGCTGCTGCTGTGAGGATC +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCLRPPS*AAAVRI
Trigger: GATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp AAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGAAACGATTTTCTCACATaGATCTTGAAGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KPIWLRGQMGLKLLLRQRNDFLT*ILKCLN
Trigger: ATTCAGACACTTCAAGATCCATGTGAGAAAATCGTT...TCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTAATGCAACATATCTCCTaGATGAAGTCACTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVMQHIS*MKSLRR
Trigger: CCTTCTCAGTGACTTCATCCAGGAGATATGTTGCAT...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGAGACAGATGGCGGCACTaGAGAAAGCAGCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGDRWRH*RKQLFP
Trigger: TGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTC...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACAATGGTTTAGATTTTaGTCACACGTGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: GNPHLIGEGLRLRDIVFKQWFRF*SHVFVL
Trigger: CAACACAAACACGTGTGATCAAAATCTAAACCATTG...TTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR TCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTGCATTCTGCTTGAGTaGGTTCCACTGCTCACGCTT +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCCILLE*VPLLTL
Trigger: AAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAGATCAAGATGACAAATaGCATAATCCAAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPDQDDK*HNPRQH
Trigger: ATGCTGTCTTGGATTATGTCATTTGTCATCTTGATC...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTATGAAATCTTGGGATTaGCATTCATGGCTCGGATCA +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSMKSWD*HSWLGS
Trigger: TGATCCGAGCCATGAATGTCAATCCCAAGATTTCAT...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGATTCAGAATGAGGTGGTaGCCATTAGACTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGFRMRW*PLDSRG
Trigger: GCCCCTTGAGTCTAATGGTCACCACCTCATTCTGAA...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACTATAAAAGGGAACATTaGGTCTGCAGGGTTAAGAGG +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNYKREH*VCRVKR
Trigger: CCTCTTAACCCTGCAGACTCAATGTTCCCTTTTATA...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCATGCCAATACACACATTaGTTTTCATTTGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPCQYTH*FSFVAG
Trigger: ACCAGCTACAAATGAAAATCAATGTGTGTATTGGCA...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGACCAAAGAGTTGTCCCTaGACCTTGGCAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGPKSCP*TLATCS
Trigger: TGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGG...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTCGTCTTGAACCTGGTTaGATTGACTCCGGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCRLEPG*IDSGLS
Trigger: ACTCAACCCGGAGTCAATGCAACCAGGTTCAAGACG...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACTTGAAGTGTCTGAATaGCATTTTTGCTACATGGAA +
Preference number: 4 (lower is better)
Translates to: GNPHLIGEGLRLRDIVFKLEVSE*HFCYME
Trigger: TTCCATGTAGCAAAAATGGCATTCAGACACTTCAAG...TTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR GCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACAGCACAGGGGTAAGATaGTTTAGAGAAGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNSTGVR*FREAVC
Trigger: ACAAACAGCTTCTCTAAAGCATCTTACCCCTGTGCT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp TTAAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATGATGAATTGTCACTATaGAAGGCCACCGTACAAAAG +
Preference number: 4 (lower is better)
Translates to: LKSWQSTSYWRRTPTSRHDELSL*KATVQK
Trigger: CTTTTGTACGGTGGCCTTGCATAGTGACAATTCATC...ATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTGCCATTTTTGCTACATaGAATGCCTCCACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCAIFAT*NASTVA
Trigger: CGCCACAGTGGAGGCATTCCATGTAGCAAAAATGGC...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCAAGCTTTGACATTCATTaGTCAACTAAACCAAACTGG +
Preference number: 4 (lower is better)
Translates to: WSTKPNWALSKSERKSKPSFDIH*STKPNW
Trigger: CCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGCT...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTTATTAAACAAACCTTaGCGTGGACGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCLLNKP*RGRVGC
Trigger: GCAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTGCAAAAGGCGTGACTTaGTTGTTTCCACACCATCAT +
Preference number: 4 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLAKGVT*LFPHHH
Trigger: ATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGC...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNKSSFS*NVRKVS
Trigger: CGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGAGGTGGTTCTAAGGCCTaGATTGCAAAGGCAATGCAA +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGGGSKA*IAKAMQ
Trigger: TTGCATTGCCTTTGCAATGCAGGCCTTAGAACCACC...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTTTCCAGGAATGTGACTaGTGTGTAAATCAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLFQECD*CVNQGK
Trigger: CTTGCCCTGATTTACACAGCAGTCACATTCCTGGAA...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTATCAACTAAACCAAACTaGGCACTCTCAAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVSTKPN*ALSKSE
Trigger: TTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGA...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGATCAAGATGACAAATaGCATAATCCAAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNDQDDK*HNPRQH
Trigger: ATGCTGTCTTGGATTATGTCATTTGTCATCTTGATC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGATGGGACTTAAACTCCTaGTTCGACAACGACTTACAG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGWDLNS*FDNDLQ
Trigger: CTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCA...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACAACATTAACAAGAATTaGCCACCACTTCAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNNINKN*PPLQKV
Trigger: GACTTTCTGAAGTGGTGGGCAATTCTTGTTAATGTT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR GCA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACAAACTGAGCTACCTGTaGCTTTTTCCAAATCAGTAT +
Preference number: 4 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNKLSYL*LFPNQY
Trigger: ATACTGATTTGGAAAAAGGCACAGGTAGCTCAGTTT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTCTTATAATCGGACATaGCTTCTGTGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCSYNRT*LLCPAG
Trigger: ACCAGCAGGACACAGAAGCCATGTCCGATTATAAGA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGATTCATTTGTAGCTGGTaGCTCTACATGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGFICSW*LYMQVQ
Trigger: CTGAACCTGCATGTAGAGCCACCAGCTACAAATGAA...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR TCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGACTCGGATCACATCATTaGCACTGCTTTGAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGLGSHH*HCFENH
Trigger: ATGATTCTCAAAGCAGTGTCAATGATGTGATCCGAG...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTGAAAGTCACATCCAATaGCAACACCGTGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCESHIQ*QHRDFL
Trigger: CAGAAAATCACGGTGTTGTCATTGGATGTGACTTTC...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CCA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTAACGATTTTCTCACATaGATCTTGAAGTGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSNDFLT*ILKCLN
Trigger: ATTCAGACACTTCAAGATCCATGTGAGAAAATCGTT...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR GCA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGAAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGKSSFS*NVRKVS
Trigger: CGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTT...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR TCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTTGAGATGGAAATCTTaGACCTTTGTAACGGACTTT +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCLRWKS*TFVTDF
Trigger: AAAGTCCGTTACAAAGGTTCAAGATTTCCATCTCAA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CCA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTCATTTATCTCAAAGCTaGCTTCTAATCAAATCACTG +
Preference number: 4 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCHLSQS*LLIKSL
Trigger: CAGTGATTTGATTAGAAGCCAGCTTTGAGATAAATG...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS CCA 90 bp CTCAGAGCGCGGCAGGTGTTTCCATCCTCCCCCTCGGGTCGGACCTaGCCGGGTTCGGGAAGCCAGAGGGGAGGTGCCCTGGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: LRARQVFPSSPSGRT*PGSGSQRGGALGRS
Trigger: GCTGCGGCCCAGGGCACCTCCCCTCTGGCTTCCCGAACCCGGCCAGGTCCGACCCGAGGGGGAGGATGGAAACACCTGCCGCGCTCTGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000503055.5
ENST00000505320.5
ENST00000506829.5
ENST00000508915.5
ENST00000511028.1
ENST00000514670.1
CDS TCA 90 bp GCAGCAGGCACTGCGCGTCCAGGCGGGCCTGGGAATAGGAATCGCTaGACCGGGACAAGAGGGCAGCCTTGCGCGCCACATTGGACAGCT +
Preference number: 5 (lower is better)
Translates to: AAGTARPGGPGNRNR*TGTRGQPCAPHWTA
Trigger: AGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTCCCGGTTCAGCGATTCCTATTCCCAGGCCCGCCTGGACGCGCAGTGCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
CDS CCA 90 bp CAAGAGGGCAGCCTTGCGCGCCACATTGGACAGCTTGGAGCGGTTTaGGGACGGTCTCCTGACCTTGACAGCGGTGGAGGGGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: QEGSLARHIGQLGAV*GRSPDLDSGGGAGR
Trigger: TCTGCCAGCCCCTCCACCGCTGTCAAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
ENST00000514670.1
CDS CCA 90 bp ATAGATACCCTGGCGATTATTAAACAAACCTTGACGTGGACGGGTTaGCTGCCAGGGACGCGCGCGGCCCGCGTCGTGGCAACGCCCGCG +
Preference number: 5 (lower is better)
Translates to: IDTLAIIKQTLTWTG*LPGTRAARVVATPA
Trigger: CGCGGGCGTTGCCACGACGCGGGCCGCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAATCGCCAGGGTATCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS CCA 90 bp AGCCCGGCCATAGATACCCTGGCGATTATTAAACAAACCTTGACGTaGACGGGTTGGCTGCCAGGGACGCGCGCGGCCCGCGTCGTGGCA +
Preference number: 5 (lower is better)
Translates to: SPAIDTLAIIKQTLT*TGWLPGTRAARVVA
Trigger: TGCCACGACGCGGGCCGCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAATCGCCAGGGTATCTATGGCCGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAGACGGTCTCCTGACCTaGACAGCGGTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSDGLLT*TAVEGL
Trigger: CAGCCCCTCCACCGCTGTCAAGGTCAGGAGACCGTC...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCGCCTTGCGCGCCACATaGGACAGCTTGGAGCGGTTT +
Preference number: 5 (lower is better)
Translates to: TDGGTGESSCFHALGQRSALRAT*DSLERF
Trigger: AAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGC...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS GCA 90 bp GCTTCTGTGTCCTGCTGGTCTGCATTCTGCTTGAGTGAGTTCCACTaGTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTA +
Preference number: 5 (lower is better)
Translates to: ASVSCWSAFCLSEFH*SRFRSSKLQGSDRL
Trigger: TAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGACACAGAAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000506829.5
ENST00000511028.1
CDS-3UTR CAA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGGAGGATCCCAAAGAGTaGTCCCTGCACCTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: TAHASAPPSSKALTAYSLEDPKE*SLHLGN
Trigger: GTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTC...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS TCA 90 bp ATCGGACATGGCTTCTGTGTCCTGCTGGTCTGCATTCTGCTTGAGTaGGTTCCACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: IGHGFCVLLVCILLE*VPLLTLPLLQAPRL
Trigger: GAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGACACAGAAGCCATGTCCGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000506829.5
ENST00000511028.1
CDS-3UTR CAA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGATTACGTCCTCCTTCTaGGGCTGCTGCTGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: TAHASAPPSSKALTAYSLITSSF*GCCCED
Trigger: ATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAAT...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CAA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCCCTGGAGGACCTTCCTaGGAGTGCACTTTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVPGGPS*ECTFLS
Trigger: GCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAGG...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp ACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGTTGTCCCTGCACCTaGGCAACTTGCTCAATGAGT +
Preference number: 5 (lower is better)
Translates to: TAHASAPPSSKALTAYSLSCPCT*ATCSMS
Trigger: ACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACT...CAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CAA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTGAGGATCCCAAAGAGTaGTCCCTGCACCTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: TGESSCFHALGQRSRSGAEDPKE*SLHLGN
Trigger: GTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTC...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAATTACGTCCTCCTTCTaGGGCTGCTGCTGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSITSSF*GCCCED
Trigger: ATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAAT...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGCTCGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCA +
Preference number: 5 (lower is better)
Translates to: SRFRSSKLQGSDRLFSELGKRRD*IVSTPS
Trigger: TGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCC...GAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CAA 90 bp CTGAGCTCCTCTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTTGAAGAGTGCAGAGAGGGGACCTaGCTGTCAACAGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: LSSSDLCFCGGHPPELEECREGT*LSTDFP
Trigger: GGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGCA...CTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAGAGGAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CAA 90 bp AATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGGACGGTCTCCTGACCTaGACAGCGGTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: NLGNPHLIGEGLRLRDIVDGLLT*TAVEGL
Trigger: CAGCCCCTCCACCGCTGTCAAGGTCAGGAGACCGTC...CACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCGGCATCCTCCTGAGCTaGAAGAGATTTAAGCTCGTC +
Preference number: 5 (lower is better)
Translates to: TDGGTGESSCFHALGQRSGILLS*KRFKLV
Trigger: GACGAGCTTAAATCTCTTCAAGCTCAGGAGGATGCC...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419395.6
CDS TCA 90 bp TATAATCGGACATGGCTTCTGTGTCCTGCTGGTCTGCATTCTGCTTaGGTGAGTTCCACTGCTCACGCTTCCGCTCCTCCAAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: YNRTWLLCPAGLHSA*VSSTAHASAPPSSK
Trigger: CTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGACACAGAAGCCATGTCCGATTATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000506829.5
ENST00000511028.1
CDS-3UTR CAA 90 bp TGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGTTTGATCACACGTGTTaGTGTTGTACTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: CSRFRSSKLQGSDRLFSEFDHTC*CCTPSA
Trigger: GGCTGAAGGAGTACAACACAAACACGTGTGATCAAA...CTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CAA 90 bp TGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACGACAAGAGGGCAGCCTaGCGCGCCACATTGGACAGC +
Preference number: 5 (lower is better)
Translates to: CLNQFGYGGKWDLNSCFDDKRAA*RATLDS
Trigger: GCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTC...GTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp CTGAGCTCCTCTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTTGAAGAGGGCATCCTCCTGAGCTaGAAGAGATTTAAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: LSSSDLCFCGGHPPELEEGILLS*KRFKPA
Trigger: TGCAGGCTTAAATCTCTTCAAGCTCAGGAGGATGCC...CTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAGAGGAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS TCA 90 bp CAGGGAAGCAGCAGTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTaGCTTGATTGTTTCCACACCATCATTACGTCCTCCTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: QGSSSKGSLQPRQKA*LDCFHTIITSSFLG
Trigger: GCCCAAGAAGGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTACTGCTGCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS-3UTR CAA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCATTATTAAACAAACCTaGACGTGGACGGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVIIKQT*TWTGWL
Trigger: CAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAAT...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTTCACACGTGTTTGTGTaGTACTCCTTCAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: TGESSCFHALGQRSRSGASHVFV*YSFSQK
Trigger: CTTCTGGCTGAAGGAGTACAACACAAACACGTGTGA...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp CTGAGCTCCTCTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTTGAAGAGTCACACGTGTTTGTGTaGTACTCCTTCAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LSSSDLCFCGGHPPELEESHVFV*YSFSQK
Trigger: CTTCTGGCTGAAGGAGTACAACACAAACACGTGTGA...CTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAGAGGAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CAA 90 bp GACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGGCCTTGCGCGCCACATaGGACAGCTTGGAGCGGTTT +
Preference number: 5 (lower is better)
Translates to: DIVFKPIWLRGQMGLKLLALRAT*DSLERF
Trigger: AAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGC...CAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCGGAGGGAATGAAATCTaGGGATTGACATTCATGGCT +
Preference number: 5 (lower is better)
Translates to: TDGGTGESSCFHALGQRSGGNEI*GLTFMA
Trigger: AGCCATGAATGTCAATCCCAAGATTTCATTCCCTCC...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp ACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAATAGGCCAGTCTCCTTaGGCTTTGTGGATTCTTTCC +
Preference number: 5 (lower is better)
Translates to: TEDRWRHWRKQLFPRTGSIGQSP*ALWILS
Trigger: GGAAAGAATCCACAAAGCCAAAGGAGACTGGCCTAT...TGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS TCA 90 bp CAGGGAAGCAGCAGTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTaGCTTGATTGTTTCCACACCATCATTACGTCCTCGTTGTACTCC +
Preference number: 5 (lower is better)
Translates to: QGSSSKGSLQPRQKA*LDCFHTIITSSLYS
Trigger: GGAGTACAACGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTACTGCTGCTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503055.5
CDS CCA 90 bp AGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTaGGTCAAAGGAGCAGGTCTGGTGCTTTTAAAATCTTGGCAATCC +
Preference number: 5 (lower is better)
Translates to: RRQMAALEKAAVSTH*VKGAGLVLLKSWQS
Trigger: GGATTGCCAAGATTTTAAAAGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TGCTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCTGACCGCCTATTCTCTGAGTTCGTAAAGTTTCGTTaGAGACCAGTCTTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: CSRFRSSKLQGSDRLFSEFVKFR*RPVFSG
Trigger: ACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAA...CTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGACGGTCTCCTGACCTaGACAGCGGTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSDGLLT*TAVEGL
Trigger: CAGCCCCTCCACCGCTGTCAAGGTCAGGAGACCGTC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAAGCCACATTGGACAGCTaGGAGCGGTTTGGGGACGGT +
Preference number: 5 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQATLDS*ERFGDG
Trigger: ACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGC...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTGTTCTAAGGCCTGCATaGCAAAGGCAATGCAACATA +
Preference number: 5 (lower is better)
Translates to: TGESSCFHALGQRSRSGAVLRPA*QRQCNI
Trigger: TATGTTGCATTGCCTTTGCAATGCAGGCCTTAGAAC...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGACTTGACGTGGACGGGTaGGCTGCCAGGGACGCGCGC +
Preference number: 5 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGLDVDG*AARDAR
Trigger: GCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAAG...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp CACAGAAGACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCTTCGTAAAGTTTCGTTaGAGACCAGTCTTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: HRRQMAALEKAAVSTHWVFVKFR*RPVFSG
Trigger: ACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAA...GACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGTCTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCCTGGAGGACCTTCCTaGGAGTGCACTTTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: DIVFKPIWLRGQMGLKLLPGGPS*ECTFLS
Trigger: GCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAGG...CAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp CATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTTGGGCCACATTGGACAGCTaGGAGCGGTTTGGGGACGGT +
Preference number: 5 (lower is better)
Translates to: HLIGEGLRLRDIVFKPIWATLDS*ERFGDG
Trigger: ACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGC...CCAAATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGACAAGAGGGCAGCCTaGCGCGCCACATTGGACAGC +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSDKRAA*RATLDS
Trigger: GCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTAGATTTAAGCTCGTCTaGAACCTGGTTGCATTGACT +
Preference number: 5 (lower is better)
Translates to: TGESSCFHALGQRSRSGARFKLV*NLVALT
Trigger: AGTCAATGCAACCAGGTTCAAGACGAGCTTAAATCT...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419395.6
CDS CCA 90 bp GACTTCGAGACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATaGGACTTAAACTCCTGCTTCGACAACGACTTACAGATCGCACCG +
Preference number: 5 (lower is better)
Translates to: DFETSCLNQFGYGGK*DLNSCFDNDLQIAP
Trigger: CGGTGCGATCTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTCTCGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
CDS-3UTR CAA 90 bp TTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAGAGGATCCCAAAGAGTaGTCCCTGCACCTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: LAIHILLEKDSDFETSCLEDPKE*SLHLGN
Trigger: GTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTC...TAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp TTGCTCAGTGCCACAAAGCAAGCTGATGACCAAGTCATGACTAGCAGTTACCTATGCAGAGAGGGGACCTaGCTGTCAACAGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: LLSATKQADDQVMTSSYLCREGT*LSTDFP
Trigger: GGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGCA...TAGGTAACTGCTAGTCATGACTTGGTCATCAGCTTGCTTTGTGGCACTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp TGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGAAAAGCAAGCCACCTGGAGGACCTTCCTaGGAGTGCACTTTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: WSTKPNWALSKSERKSKPPGGPS*ECTFLS
Trigger: GCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAGG...TGGCTTGCTTTTCCGTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGCCACATTGGACAGCTaGGAGCGGTTTGGGGACGGT +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSATLDS*ERFGDG
Trigger: ACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGCCTTGCGCGCCACATaGGACAGCTTGGAGCGGTTT +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSALRAT*DSLERF
Trigger: AAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp ACAGATGGCGGCACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCGGTGCTTTTAAAATCTaGGCAATCCACATCTTATTG +
Preference number: 5 (lower is better)
Translates to: TDGGTGESSCFHALGQRSGAFKI*AIHILL
Trigger: CAATAAGATGTGGATTGCCAAGATTTTAAAAGCACC...GCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGTGCCGCCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGAAGTTGTCCCTGCACCTaGGCAACTTGCTCAATGAGT +
Preference number: 5 (lower is better)
Translates to: VFKPIWLRGQMGLKLLLRSCPCT*ATCSMS
Trigger: ACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACT...TCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp AAAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGATTACGTCCTCCTTCTaGGGCTGCTGCTGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: KILAIHILLEKDSDFETSITSSF*GCCCED
Trigger: ATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAAT...CGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp AAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACAACGAGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCA +
Preference number: 5 (lower is better)
Translates to: KPIWLRGQMGLKLLLRQRGKRRD*IVSTPS
Trigger: TGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCC...TCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp GCTGATTTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTGCGGCATCCTCCTGAGCTaGAAGAGATTTAAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: ADLFPPLQPKGIWPICSCGILLS*KRFKLL
Trigger: AAGCAGCTTAAATCTCTTCAAGCTCAGGAGGATGCC...GCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CAA 90 bp GTTCAGCCATCTAATGACTTAATTTTATCTTCTAGGGTGGTTATACCCAAGCTTGACAAGAGGGCAGCCTaGCGCGCCACATTGGACAGC +
Preference number: 5 (lower is better)
Translates to: VQPSNDLILSSRVVIPKLDKRAA*RATLDS
Trigger: GCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTC...AAGCTTGGGTATAACCACCCTAGAAGATAAAATTAAGTCATTAGATGGCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp ACTGGAGAAAGCAGCTGTTTCCACGCACTGGGTCAAAGGAGCAGGTCTGGTGCTTTTGAGATGGAAATCTaGAACCTTTGTAACGGACTT +
Preference number: 5 (lower is better)
Translates to: TGESSCFHALGQRSRSGAFEMEI*NLCNGL
Trigger: AAGTCCGTTACAAAGGTTCAAGATTTCCATCTCAAA...AGCACCAGACCTGCTCCTTTGACCCAGTGCGTGGAAACAGCTGCTTTCTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS GCA 90 bp TCTCCATCTGCTCCATATGCAATATCTAGGGGTGGTTCTAAGGCCTaGATTGCAAAGGCAATGCAACATATCTCCTGGATGAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: SPSAPYAISRGGSKA*IAKAMQHISWMKSL
Trigger: CAGTGACTTCATCCAGGAGATATGTTGCATTGCCTTTGCAATGCAGGCCTTAGAACCACCCCTAGATATTGCATATGGAGCAGATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
CDS GCA 90 bp TGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTaGTTCGACAACGACTTACAGATCGCACCGAATTCCAAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: CLNQFGYGGKWDLNS*FDNDLQIAPNSKKP
Trigger: GGGCTTTTTGGAATTCGGTGCGATCTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTGCTTCGACTCACACGTGTTTGTGTaGTACTCCTTCAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: CLNQFGYGGKWDLNSCFDSHVFV*YSFSQK
Trigger: CTTCTGGCTGAAGGAGTACAACACAAACACGTGTGA...GTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGAGGATCCCAAAGAGTaGTCCCTGCACCTTGGCAAC +
Preference number: 5 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNEDPKE*SLHLGN
Trigger: GTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp CATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTTGGTGCAGAGAGGGGACCTaGCTGTCAACAGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: HLIGEGLRLRDIVFKPIWCREGT*LSTDFP
Trigger: GGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGCA...CCAAATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp AAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTTGGTCTGCATTCTGCTaGAGTGAGTTCCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: KSWQSTSYWRRTPTSRHRWSAFC*SEFHCS
Trigger: TGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCA...ACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp CTGCTTTTTCAGCTGATTTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGACAGTTTCAACCAGAGTaGTACTCCTTCAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LLFQLIYFLLCSQKGYGRQFQPE*YSFSQK
Trigger: CTTCTGGCTGAAGGAGTACAACTCTGGTTGAAACTG...TCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATCAGCTGAAAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS GCA 90 bp TCCTGGAGGACGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTTTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: SWRTLYSFSQKSSFS*NVRKVSFETSLFRF
Trigger: AAACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACGTCCTCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514670.1
CDS-3UTR CAA 90 bp GACTTCGAGACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTATTTGATCACACGTGTTaGTGTTGTACTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: DFETSCLNQFGYGGKWDLFDHTC*CCTPSA
Trigger: GGCTGAAGGAGTACAACACAAACACGTGTGATCAAA...TAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTCTCGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTATTACGTCCTCCTTCTaGGGCTGCTGCTGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSITSSF*GCCCED
Trigger: ATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAAT...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTTGCAGAGAGGGGACCTaGCTGTCAACAGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSCREGT*LSTDFP
Trigger: GGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGCA...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp ATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTGGAGGGAATGAAATCTaGGGATTGACATTCATGGCT +
Preference number: 5 (lower is better)
Translates to: ILAIHILLEKDSDFETSCGGNEI*GLTFMA
Trigger: AGCCATGAATGTCAATCCCAAGATTTCATTCCCTCC...ACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp AAATCTTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGCAATCCACATCTTATaGGAGAAGGACTCCGACTTC +
Preference number: 5 (lower is better)
Translates to: KSWQSTSYWRRTPTSRHRAIHIL*EKDSDF
Trigger: GAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC...ACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp GCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACAACACTTGGGATGAATaGTCACTATGCAAGGCCACC +
Preference number: 5 (lower is better)
Translates to: AIHILLEKDSDFETSCLNNTWDE*SLCKAT
Trigger: GGTGGCCTTGCATAGTGACAATTCATCCCAAGTGTT...GTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS GCA 90 bp TGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTaGTTCGACAACGACTTACAGATCGCACCGAATTCCATTGTGAAT +
Preference number: 5 (lower is better)
Translates to: CLNQFGYGGKWDLNS*FDNDLQIAPNSIVN
Trigger: ATTCACAATGGAATTCGGTGCGATCTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACAGTTGTCCCTGCACCTaGGCAACTTGCTCAATGAGT +
Preference number: 5 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNSCPCT*ATCSMS
Trigger: ACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAATTCAACCAGATCGTCTaGAACCTGGTTGCATTGACT +
Preference number: 5 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQFNQIV*NLVALT
Trigger: AGTCAATGCAACCAGGTTCAAGACGATCTGGTTGAA...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp TTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTATTCAACCAGATCGTCTaGAACCTGGTTGCATTGACT +
Preference number: 5 (lower is better)
Translates to: LAIHILLEKDSDFETSCLFNQIV*NLVALT
Trigger: AGTCAATGCAACCAGGTTCAAGACGATCTGGTTGAA...TAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp CCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAATTGGCATCCTCCTGAGCTaGAAGAGATTTAAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PHLIGEGLRLRDIVFKPIGILLS*KRFKLL
Trigger: AAGCAGCTTAAATCTCTTCAAGCTCAGGAGGATGCC...AATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTTGGTCTGCATTCTGCTaGAGTGAGTTCCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSWSAFC*SEFHCS
Trigger: TGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCA...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTAGCAATCCACATCTTATaGGAGAAGGACTCCGACTTC +
Preference number: 5 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVAIHIL*EKDSDF
Trigger: GAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS GCA 90 bp CACGTGTTTGTGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTTTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: HVFVLYSFSQKSSFS*NVRKVSFETSLFRF
Trigger: AAACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACACAAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS GCA 90 bp AGATGGTGTCAACGATTTTCTCACATGGATCTTGAAGTGTCTGAATaGCATTTTTGCTACATGGAATGCCTCCACTGTGGCGATGTAGAT +
Preference number: 5 (lower is better)
Translates to: RWCQRFSHMDLEVSE*HFCYMECLHCGDVD
Trigger: ATCTACATCGCCACAGTGGAGGCATTCCATGTAGCAAAAATGGCATTCAGACACTTCAAGATCCATGTGAGAAAATCGTTGACACCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
CDS GCA 90 bp ATTACGTCCTCGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTTTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: ITSSLYSFSQKSSFS*NVRKVSFETSLFRF
Trigger: AAACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACGAGGACGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503055.5
CDS-3UTR CAA 90 bp TTTTGGGCCTTGAGTTTAAGTAGTTTTGGTCAGACAGAGTTCAATAGGAGGTCTGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCA +
Preference number: 5 (lower is better)
Translates to: FWALSLSSFGQTEFNRRSGKRRD*IVSTPS
Trigger: TGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCC...AGACCTCCTATTGAACTCTGTCTGACCAAAACTACTTAAACTCAAGGCCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GACTTCGAGACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATGGGACTTAATGGCCGATCTGTTCTaGCTTTCTTCAAGATTCTTT +
Preference number: 5 (lower is better)
Translates to: DFETSCLNQFGYGGKWDLMADLF*LSSRFF
Trigger: AAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCAT...TAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTCTCGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp CCACCACTTCAGAAAGTCACATCCAATGACAACACCGTGATTTTCTGTTGCCAAAATGAAATCTTGGGATaGACATTCATGGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: PPLQKVTSNDNTVIFCCQNEILG*TFMARI
Trigger: GATCCGAGCCATGAATGTCAATCCCAAGATTTCATT...TTGGCAACAGAAAATCACGGTGTTGTCATTGGATGTGACTTTCTGAAGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp TTGGCAATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAATGAAATCTTGGGATaGACATTCATGGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: LAIHILLEKDSDFETSCLNEILG*TFMARI
Trigger: GATCCGAGCCATGAATGTCAATCCCAAGATTTCATT...TAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS-3UTR CAA 90 bp ATCCACATCTTATTGGAGAAGGACTCCGACTTCGAGACATCGTGTTTAAACCAAGTTCTAAGGCCTGCATaGCAAAGGCAATGCAACATA +
Preference number: 5 (lower is better)
Translates to: IHILLEKDSDFETSCLNQVLRPA*QRQCNI
Trigger: TATGTTGCATTGCCTTTGCAATGCAGGCCTTAGAAC...TTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS GCA 90 bp TTTCAACCAGAGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTTTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: FQPELYSFSQKSSFS*NVRKVSFETSLFRF
Trigger: AAACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACTCTGGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS GCA 90 bp TTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTaGTTTCTTCAAGATTCTTTTCAGTTTCAACCAGAGTTGTACTCC +
Preference number: 5 (lower is better)
Translates to: LFPPLQPKGIWPICS*FLQDSFQFQPELYS
Trigger: GGAGTACAACTCTGGTTGAAACTGAAAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS CCA 90 bp AATCTCTGGGTTTATAAATGTTCTCGAACTTGTGAATCAAACACTTaGGATGAATTGTCACTATGCAAGGCCACCGTACAAAAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: NLWVYKCSRTCESNT*DELSLCKATVQKPL
Trigger: GAGGGGCTTTTGTACGGTGGCCTTGCATAGTGACAATTCATCCCAAGTGTTTGATTCACAAGTTCGAGAACATTTATAAACCCAGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511028.1
CDS-3UTR CAA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACTTTGATCACACGTGTTaGTGTTGTACTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNFDHTC*CCTPSA
Trigger: GGCTGAAGGAGTACAACACAAACACGTGTGATCAAA...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGTTCTAAGGCCTGCATaGCAAAGGCAATGCAACATA +
Preference number: 5 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNVLRPA*QRQCNI
Trigger: TATGTTGCATTGCCTTTGCAATGCAGGCCTTAGAAC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS GCA 90 bp TTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTTaGTTTCTTCAAGATTCTTTTCAGTTTCAACCAGATCGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: LFPPLQPKGIWPICS*FLQDSFQFQPDRLE
Trigger: TTCAAGACGATCTGGTTGAAACTGAAAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295213.9
ENST00000505320.5
ENST00000511028.1
CDS CCA 90 bp ATAATCCAAGACAGCATTCTCAAAGTCATTCGACCCCACATAAGATaGTGTCAACGATTTTCTCACATGGATCTTGAAGTGTCTGAATGC +
Preference number: 5 (lower is better)
Translates to: IIQDSILKVIRPHIR*CQRFSHMDLEVSEC
Trigger: GCATTCAGACACTTCAAGATCCATGTGAGAAAATCGTTGACACCATCTTATGTGGGGTCGAATGACTTTGAGAATGCTGTCTTGGATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000510549.1
ENST00000511028.1
CDS-3UTR CAA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTAGTTGTCCCTGCACCTaGGCAACTTGCTCAATGAGT +
Preference number: 5 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCSCPCT*ATCSMS
Trigger: ACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACT...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGATGGTCTGCATTCTGCTaGAGTGAGTTCCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGWSAFC*SEFHCS
Trigger: TGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCA...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp AAAACTGAGCTGAGGCCAATTCAGTGTCTCTCTCAAAGGTATGTGGAGAAAGTACAGTCTCCTTTGGCTTaGTGGATTCTTTCCAAAAAT +
Preference number: 5 (lower is better)
Translates to: KTELRPIQCLSQRYVEKVQSPLA*WILSKN
Trigger: ATTTTTGGAAAGAATCCACAAAGCCAAAGGAGACTG...TACTTTCTCCACATACCTTTGAGAGAGACACTGAATTGGCCTCAGCTCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGATCACACGTGTTTGTGTaGTACTCCTTCAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGSHVFV*YSFSQK
Trigger: CTTCTGGCTGAAGGAGTACAACACAAACACGTGTGA...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGAGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCA +
Preference number: 5 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGGKRRD*IVSTPS
Trigger: TGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCC...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACATGGCCGATCTGTTCTaGCTTTCTTCAAGATTCTTT +
Preference number: 5 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNMADLF*LSSRFF
Trigger: AAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCAT...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGAGGCATCCTCCTGAGCTaGAAGAGATTTAAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGGILLS*KRFKLL
Trigger: AAGCAGCTTAAATCTCTTCAAGCTCAGGAGGATGCC...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTGCAATCCACATCTTATaGGAGAAGGACTCCGACTTC +
Preference number: 5 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCAIHIL*EKDSDF
Trigger: GAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGC...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTTTGATCACACGTGTTaGTGTTGTACTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCFDHTC*CCTPSA
Trigger: GGCTGAAGGAGTACAACACAAACACGTGTGATCAAA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTGAAGAGATTTAAGCTGCTTTTTCAGCTGATTTATTTCCTCCTCTGCAGCCAAATGGCCGATCTGTTCTaGCTTTCTTCAAGATTCTTT +
Preference number: 5 (lower is better)
Translates to: LKRFKLLFQLIYFLLCSQMADLF*LSSRFF
Trigger: AAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCAT...TTGGCTGCAGAGGAGGAAATAAATCAGCTGAAAAAGCAGCTTAAATCTCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS-3UTR CAA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTGGAGGGAATGAAATCTaGGGATTGACATTCATGGCT +
Preference number: 5 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCGGNEI*GLTFMA
Trigger: AGCCATGAATGTCAATCCCAAGATTTCATTCCCTCC...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACGGTGCTTTTAAAATCTaGGCAATCCACATCTTATTG +
Preference number: 5 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNGAFKI*AIHILL
Trigger: CAATAAGATGTGGATTGCCAAGATTTTAAAAGCACC...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GCTTTGACATTCATTGGTCAACTAAACCAAACTGGGCACTCTCAAAATCAGAACTTTGAGATGGAAATCTaGAACCTTTGTAACGGACTT +
Preference number: 5 (lower is better)
Translates to: ALTFIGQLNQTGHSQNQNFEMEI*NLCNGL
Trigger: AAGTCCGTTACAAAGGTTCAAGATTTCCATCTCAAA...GTTCTGATTTTGAGAGTGCCCAGTTTGGTTTAGTTGACCAATGAATGTCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp TTATCTCAAAGCTGGCTTCTAATCAAATCACTGCTCTACATTTATGAACAAGGAAATGAAATCTTGGGATaGACATTCATGGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: LSQSWLLIKSLLYIYEQGNEILG*TFMARI
Trigger: GATCCGAGCCATGAATGTCAATCCCAAGATTTCATT...TCCTTGTTCATAAATGTAGAGCAGTGATTTGATTAGAAGCCAGCTTTGAGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTTCGTAAAGTTTCGTTaGAGACCAGTCTTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCFVKFR*RPVFSG
Trigger: ACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS-3UTR CAA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTCACCGTGATTTTCTGTaGCCAATACACACATTGATT +
Preference number: 5 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCHRDFL*PIHTLI
Trigger: AATCAATGTGTGTATTGGCAACAGAAAATCACGGTG...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS-3UTR CAA 90 bp GCAATATATCTAAAGTTACAAATGCGCCAAGCCAAAACATTTAACTCTCTGTGTTTGCCAATACACACATaGATTTTCATTTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: AIYLKLQMRQAKTFNSLCLPIHT*IFICSW
Trigger: CCAGCTACAAATGAAAATCAATGTGTGTATTGGCAA...ACACAGAGAGTTAAATGTTTTGGCTTGGCGCATTTGTAACTTTAGATATATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS CCA 72 bp GCCGCCGCGCCTCATCCGCCGTCCCGCGCGGTCTCCTaGCTCCCCAGCAGCCGCCTGAGCCCGGCCATAGAT +
Preference number: 6 (lower is better)
Translates to: AAAPHPPSRAVS*LPSSRLSPAID
Trigger: ATCTATGGCCGGGCTCAGGCGGCTGCTGGGGAGCCAGGAGACCGCGCGGGACGGCGGATGAGGCGCGGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000506829.5
ENST00000508915.5
ENST00000511028.1
ENST00000514670.1
CDS CCA 72 bp CTATTCCTCTCGGCCCCACGCTGCGCGATGGAGACTTaGGGGGACCAGGCGGTGGCCTCCGCAGGACCGTGG +
Preference number: 6 (lower is better)
Translates to: LFLSAPRCAMET*GDQAVASAGPW
Trigger: CCACGGTCCTGCGGAGGCCACCGCCTGGTCCCCCCAAGTCTCCATCGCGCAGCGTGGGGCCGAGAGGAATAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000503055.5
ENST00000505038.1
ENST00000505320.5
ENST00000506829.5
ENST00000508915.5
ENST00000511028.1
ENST00000514670.1
CDS TCA 72 bp ACTGCGCGTCCAGGCGGGCCTGGGAATAGGAATCGCTaGACCGGGACAAGAGGGCAGCCTTGCGCGCCACAT +
Preference number: 6 (lower is better)
Translates to: TARPGGPGNRNR*TGTRGQPCAPH
Trigger: ATGTGGCGCGCAAGGCTGCCCTCTTGTCCCGGTTCAGCGATTCCTATTCCCAGGCCCGCCTGGACGCGCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
CDS CAA 90 bp CGCCTGAGCCCGGCCATAGATACCCTGGCGATTATTAAACAAACCTaGACGTGGACGGGTTGGCTGCCAGGGACGCGCGCGGCCCGCGTC +
Preference number: 6 (lower is better)
Translates to: RLSPAIDTLAIIKQT*TWTGWLPGTRAARV
Trigger: GACGCGGGCCGCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAATCGCCAGGGTATCTATGGCCGGGCTCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS CCA 72 bp CTGGCGATTATTAAACAAACCTTGACGTGGACGGGTTaGCTGCCAGGGACGCGCGCGGCCCGCGTCGTGGCA +
Preference number: 6 (lower is better)
Translates to: LAIIKQTLTWTG*LPGTRAARVVA
Trigger: TGCCACGACGCGGGCCGCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAATCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS CCA 72 bp AGCCTTGCGCGCCACATTGGACAGCTTGGAGCGGTTTaGGGACGGTCTCCTGACCTTGACAGCGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: SLARHIGQLGAV*GRSPDLDSGGG
Trigger: CCCTCCACCGCTGTCAAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
ENST00000514670.1
CDS CAA 72 bp CTGAACCGGGACAAGAGGGCAGCCTTGCGCGCCACATaGGACAGCTTGGAGCGGTTTGGGGACGGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: LNRDKRAALRAT*DSLERFGDGLL
Trigger: CAGGAGACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTCCCGGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
ENST00000514670.1
CDS CAA 90 bp GCCACATTGGACAGCTTGGAGCGGTTTGGGGACGGTCTCCTGACCTaGACAGCGGTGGAGGGGCTGGCAGATCTGCTGCGGCTGCAGCTA +
Preference number: 6 (lower is better)
Translates to: ATLDSLERFGDGLLT*TAVEGLADLLRLQL
Trigger: TAGCTGCAGCCGCAGCAGATCTGCCAGCCCCTCCACCGCTGTCAAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
ENST00000514670.1
CDS CAA 90 bp CTGAACCGGGACAAGAGGGCAGCCTTGCGCGCCACATTGGACAGCTaGGAGCGGTTTGGGGACGGTCTCCTGACCTTGACAGCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: LNRDKRAALRATLDS*ERFGDGLLTLTAVE
Trigger: CTCCACCGCTGTCAAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTCCCGGTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
ENST00000514670.1
CDS CAA 72 bp GACAAGAGGGCAGCCTTGCGCGCCACATTGGACAGCTaGGAGCGGTTTGGGGACGGTCTCCTGACCTTGACA +
Preference number: 6 (lower is better)
Translates to: DKRAALRATLDS*ERFGDGLLTLT
Trigger: TGTCAAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
ENST00000514670.1
CDS CCA 72 bp ATAGATACCCTGGCGATTATTAAACAAACCTTGACGTaGACGGGTTGGCTGCCAGGGACGCGCGCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: IDTLAIIKQTLT*TGWLPGTRAAR
Trigger: GCGGGCCGCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAATCGCCAGGGTATCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS CAA 72 bp CCGGCCATAGATACCCTGGCGATTATTAAACAAACCTaGACGTGGACGGGTTGGCTGCCAGGGACGCGCGCG +
Preference number: 6 (lower is better)
Translates to: PAIDTLAIIKQT*TWTGWLPGTRA
Trigger: CGCGCGCGTCCCTGGCAGCCAACCCGTCCACGTCAAGGTTTGTTTAATAATCGCCAGGGTATCTATGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295213.9
CDS TCA 72 bp GGCTTCTGTGTCCTGCTGGTCTGCATTCTGCTTGAGTaGGTTCCACTGCTCACGCTTCCGCTCCTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: GFCVLLVCILLE*VPLLTLPLLQA
Trigger: AGCTTGGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGACACAGAAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000506829.5
ENST00000511028.1
CDS GCA 72 bp TCCTGCTGGTCTGCATTCTGCTTGAGTGAGTTCCACTaGTCACGCTTCCGCTCCTCCAAGCTCCAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: SCWSAFCLSEFH*SRFRSSKLQGS
Trigger: AGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000506829.5
ENST00000511028.1
CDS CAA 72 bp GACATGGCTTCTGTGTCCTGCTGGTCTGCATTCTGCTaGAGTGAGTTCCACTGCTCACGCTTCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DMASVSCWSAFC*SEFHCSRFRSS
Trigger: GGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGACACAGAAGCCATGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000506829.5
ENST00000511028.1
CDS TCA 72 bp ACATGGCTTCTGTGTCCTGCTGGTCTGCATTCTGCTTaGGTGAGTTCCACTGCTCACGCTTCCGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: TWLLCPAGLHSA*VSSTAHASAPP
Trigger: TGGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGACACAGAAGCCATGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000506829.5
ENST00000511028.1
CDS TCA 72 bp CACCATCATTACGTCCTCCTTCTTGGGCTGCTGCTGTaGGGATCCCAAAGAGTTGTCCCTGCACCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: HHHYVLLLGLLL*GSQRVVPAPWQ
Trigger: TTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAATGATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS TCA 72 bp TTGCTACATGGAATGCCTCCACTGTGGCGATGTAGATaGTCCGCTGAACGGTCTCAGCCTTGTCGATGCAGC +
Preference number: 6 (lower is better)
Translates to: LLHGMPPLWRCR*SAERSQPCRCS
Trigger: GCTGCATCGACAAGGCTGAGACCGTTCAGCGGATCATCTACATCGCCACAGTGGAGGCATTCCATGTAGCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
CDS TCA 72 bp GAGCAGGCCACACGTGATAGAGGACTAAGGGAGCAGTaGAATCCGAGTCGTAGCTGCGGCGGTATTTGCAAT +
Preference number: 6 (lower is better)
Translates to: EQATRDRGLREQ*NPSRSCGGICN
Trigger: ATTGCAAATACCGCCGCAGCTACGACTCGGATTTCACTGCTCCCTTAGTCCTCTATCACGTGTGGCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000511028.1
CDS CAA 72 bp CTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTaGAAGAGATTTAAGCCTGCAGAGAGGGGACCTTGC +
Preference number: 6 (lower is better)
Translates to: LICVSVAGILLS*KRFKPAERGPC
Trigger: GCAAGGTCCCCTCTCTGCAGGCTTAAATCTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505038.1
CDS CAA 72 bp TCCTTCTTGGGCTGCTGCTGTGAGGATCCCAAAGAGTaGTCCCTGCACCTTGGCAACTTGCTCAATGAGTTC +
Preference number: 6 (lower is better)
Translates to: SFLGCCCEDPKE*SLHLGNLLNEF
Trigger: GAACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS CAA 90 bp GAAGCAGCAGTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCATTACGTCCTCCTTCTTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: EAAVKEASSQGKRRD*IVSTPSLRPPSWAA
Trigger: AGCAGCCCAAGAAGGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTACTGCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS TCA 72 bp AGCAGTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTaGCTTGATTGTTTCCACACCATCATTACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSKGSLQPRQKA*LDCFHTIITSS
Trigger: GGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS TCA 72 bp AGCAGTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTaGCTTGATTGTTTCCACACCATCATTACGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSKGSLQPRQKA*LDCFHTIITSS
Trigger: CGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503055.5
CDS GCA 72 bp CAATTTGGCTACGGGGGCAAATGGGACTTAAACTCCTaGTTCGACAACGACTTACAGATCGCACCGAATTCC +
Preference number: 6 (lower is better)
Translates to: QFGYGGKWDLNS*FDNDLQIAPNS
Trigger: GGAATTCGGTGCGATCTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
CDS CAA 72 bp GCTGCTGTGAGGATCCCAAAGAGTTGTCCCTGCACCTaGGCAACTTGCTCAATGAGTTCAAGGCAATGGTTT +
Preference number: 6 (lower is better)
Translates to: AAVRIPKSCPCT*ATCSMSSRQWF
Trigger: AAACCATTGCCTTGAACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS CAA 72 bp CTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTaGAAGAGATTTAAGCTCGTCTTGAACCTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: LICVSVAGILLS*KRFKLVLNLVA
Trigger: TGCAACCAGGTTCAAGACGAGCTTAAATCTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419395.6
CDS CAA 72 bp CTGATCTGTGTTTCTGTGGCGGGCATCCTCCTGAGCTaGAAGAGATTTAAGCGTTGTACTCCTTCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LICVSVAGILLS*KRFKRCTPSAR
Trigger: TCTGGCTGAAGGAGTACAACGCTTAAATCTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506829.5
CDS CAA 90 bp GAAGCAGCAGTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCATTACGTCCTCGTTGTACTCCTTCA +
Preference number: 6 (lower is better)
Translates to: EAAVKEASSQGKRRD*IVSTPSLRPRCTPS
Trigger: TGAAGGAGTACAACGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTACTGCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503055.5
CDS CAA 72 bp GTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCATTACGTCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: VKEASSQGKRRD*IVSTPSLRPPS
Trigger: AGAAGGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS CAA 72 bp GTAAAGGAAGCCTCCAGCCAAGGCAAAAGGCGTGACTaGATTGTTTCCACACCATCATTACGTCCTCGTTGT +
Preference number: 6 (lower is better)
Translates to: VKEASSQGKRRD*IVSTPSLRPRC
Trigger: ACAACGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503055.5
CDS TCA 72 bp GTCACTGAGAAGGCAAAAGTCAACGACAGGAGGGAATaGAATCTTGGGATTGACATTCATGGCTCGGATCAC +
Preference number: 6 (lower is better)
Translates to: VTEKAKVNDRRE*NLGIDIHGSDH
Trigger: GTGATCCGAGCCATGAATGTCAATCCCAAGATTTCATTCCCTCCTGTCGTTGACTTTTGCCTTCTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000510549.1
ENST00000511028.1
CDS GCA 72 bp GCTCCATATGCAATATCTAGGGGTGGTTCTAAGGCCTaGATTGCAAAGGCAATGCAACATATCTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: APYAISRGGSKA*IAKAMQHISWM
Trigger: CATCCAGGAGATATGTTGCATTGCCTTTGCAATGCAGGCCTTAGAACCACCCCTAGATATTGCATATGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000510549.1
ENST00000511028.1
CDS GCA 72 bp GCGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTT +
Preference number: 6 (lower is better)
Translates to: ALYSFSQKSSFS*NVRKVSFETSL
Trigger: AAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506829.5
CDS CCA 72 bp ACATCGTGTTTAAACCAATTTGGCTACGGGGGCAAATaGGACTTAAACTCCTGCTTCGACAACGACTTACAG +
Preference number: 6 (lower is better)
Translates to: TSCLNQFGYGGK*DLNSCFDNDLQ
Trigger: CTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
CDS CAA 72 bp ACCGAATTCCATTGTGAATCAAACACTTGGGATGAATaGTCACTATGCAAGGCCACCGTACAAAAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: TEFHCESNTWDE*SLCKATVQKPL
Trigger: GAGGGGCTTTTGTACGGTGGCCTTGCATAGTGACAATTCATCCCAAGTGTTTGATTCACAATGGAATTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS CAA 72 bp TGTTCTCGAACTTGTGAATCAAACACTTGGGATGAATaGTCACTATGCAAGGCCACCGTACAAAAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: CSRTCESNTWDE*SLCKATVQKPL
Trigger: GAGGGGCTTTTGTACGGTGGCCTTGCATAGTGACAATTCATCCCAAGTGTTTGATTCACAAGTTCGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511028.1
CDS CAA 90 bp AAGTCACTGAGAAGGCAAAAGTCAACGACAGGAGGGAATGAAATCTaGGGATTGACATTCATGGCTCGGATCACATCATTGACACTGCTT +
Preference number: 6 (lower is better)
Translates to: KSLRRQKSTTGGNEI*GLTFMARITSLTLL
Trigger: AAGCAGTGTCAATGATGTGATCCGAGCCATGAATGTCAATCCCAAGATTTCATTCCCTCCTGTCGTTGACTTTTGCCTTCTCAGTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000510549.1
ENST00000511028.1
CDS GCA 72 bp GTGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTT +
Preference number: 6 (lower is better)
Translates to: VLYSFSQKSSFS*NVRKVSFETSL
Trigger: AAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505038.1
ENST00000505320.5
ENST00000511028.1
CDS GCA 72 bp TCGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTT +
Preference number: 6 (lower is better)
Translates to: SLYSFSQKSSFS*NVRKVSFETSL
Trigger: AAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503055.5
CDS GCA 72 bp ACGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTT +
Preference number: 6 (lower is better)
Translates to: TLYSFSQKSSFS*NVRKVSFETSL
Trigger: AAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514670.1
CDS GCA 72 bp GAGTTGTACTCCTTCAGCCAGAAGTCTAGCTTTTCCTaGAACGTTCGTAAAGTTTCGTTTGAGACCAGTCTT +
Preference number: 6 (lower is better)
Translates to: ELYSFSQKSSFS*NVRKVSFETSL
Trigger: AAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS CCA 72 bp ACAGATCGCACCGAATTCCATTGTGAATCAAACACTTaGGATGAATTGTCACTATGCAAGGCCACCGTACAA +
Preference number: 6 (lower is better)
Translates to: TDRTEFHCESNT*DELSLCKATVQ
Trigger: TTGTACGGTGGCCTTGCATAGTGACAATTCATCCCAAGTGTTTGATTCACAATGGAATTCGGTGCGATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505320.5
CDS CAA 72 bp CAAAAGTCAACGACAGGAGGGAATGAAATCTTGGGATaGACATTCATGGCTCGGATCACATCATTGACACTG +
Preference number: 6 (lower is better)
Translates to: QKSTTGGNEILG*TFMARITSLTL
Trigger: CAGTGTCAATGATGTGATCCGAGCCATGAATGTCAATCCCAAGATTTCATTCCCTCCTGTCGTTGACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000510549.1
ENST00000511028.1
CDS CAA 72 bp AGAAGGCAAAAGTCAACGACAGGAGGGAATGAAATCTaGGGATTGACATTCATGGCTCGGATCACATCATTG +
Preference number: 6 (lower is better)
Translates to: RRQKSTTGGNEI*GLTFMARITSL
Trigger: CAATGATGTGATCCGAGCCATGAATGTCAATCCCAAGATTTCATTCCCTCCTGTCGTTGACTTTTGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000510549.1
ENST00000511028.1
CDS CCA 72 bp GACAGCATTCTCAAAGTCATTCGACCCCACATAAGATaGTGTCAACGATTTTCTCACATGGATCTTGAAGTG +
Preference number: 6 (lower is better)
Translates to: DSILKVIRPHIR*CQRFSHMDLEV
Trigger: CACTTCAAGATCCATGTGAGAAAATCGTTGACACCATCTTATGTGGGGTCGAATGACTTTGAGAATGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295213.9
ENST00000419395.6
ENST00000505320.5
ENST00000510549.1
ENST00000511028.1
CDS GCA 72 bp CAACGATTTTCTCACATGGATCTTGAAGTGTCTGAATaGCATTTTTGCTACATGGAATGCCTCCTGCACATA +
Preference number: 6 (lower is better)
Translates to: QRFSHMDLEVSE*HFCYMECLLHI
Trigger: TATGTGCAGGAGGCATTCCATGTAGCAAAAATGGCATTCAGACACTTCAAGATCCATGTGAGAAAATCGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510549.1
CDS CAA 72 bp TCTGGTGCTTTTAAAATCTTGGCAATCCACATCTTATaGGAGAAGGACTCCGACTTCGAGACATCGTGTTTA +
Preference number: 6 (lower is better)
Translates to: SGAFKILAIHIL*EKDSDFETSCL
Trigger: TAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAAAAGCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295213.9
ENST00000419395.6
CDS CAA 90 bp TTTATTTCCTCCTCTGCAGCCAAAAGGGATATGGCCGATCTGTTCTaGCTTTCTTCAAGATTCTTTTCAGTTTCAACCAGAGTTGTACTC +
Preference number: 6 (lower is better)
Translates to: FISSSAAKRDMADLF*LSSRFFSVSTRVVL
Trigger: GAGTACAACTCTGGTTGAAACTGAAAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508915.5
CDS GCA 72 bp CTTGAAGTGTCTGAATGCCATTTTTGCTACATGGAATaGCTCCTGCACATAAAAATGCAGCAAATTTATTTG +
Preference number: 6 (lower is better)
Translates to: LEVSECHFCYME*LLHIKMQQIYL
Trigger: CAAATAAATTTGCTGCATTTTTATGTGCAGGAGGCATTCCATGTAGCAAAAATGGCATTCAGACACTTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510549.1